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COL11A1 collagen, type XI, alpha 1 [Homo sapiens (human)]


Clone ID RefSeq Accession Definition Vector Stock Status *Turnaround time Price Order
OHu23797 NM_080630 Homo sapiens collagen, type XI, alpha 1 (COL11A1), transcript variant C, mRNA. pcDNA3.1+-DYK On-demand 30 $2699.00
OHu23996 NM_001190709 Homo sapiens collagen, type XI, alpha 1 (COL11A1), transcript variant E, mRNA. pcDNA3.1+-DYK On-demand 30 $2699.00
OHu25477 NM_001854 Homo sapiens collagen, type XI, alpha 1 (COL11A1), transcript variant A, mRNA. pcDNA3.1+-DYK On-demand 30 $2699.00
OHu25546 NM_080629 Homo sapiens collagen, type XI, alpha 1 (COL11A1), transcript variant B, mRNA. pcDNA3.1+-DYK On-demand 30 $2699.00
OHu23797C NM_080630 Homo sapiens collagen, type XI, alpha 1 (COL11A1), transcript variant C, mRNA. Customized vector On-demand 30 $2699.00
OHu23996C NM_001190709 Homo sapiens collagen, type XI, alpha 1 (COL11A1), transcript variant E, mRNA. Customized vector On-demand 30 $2699.00
OHu25477C NM_001854 Homo sapiens collagen, type XI, alpha 1 (COL11A1), transcript variant A, mRNA. Customized vector On-demand 30 $2699.00
OHu25546C NM_080629 Homo sapiens collagen, type XI, alpha 1 (COL11A1), transcript variant B, mRNA. Customized vector On-demand 30 $2699.00

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Gene Symbol COL11A1
Entrez Gene ID 1301
Full Name collagen, type XI, alpha 1
Synonyms CO11A1, COLL6, STL2
General protein information
Preferred Names
collagen alpha-1(XI) chain
Names
collagen alpha-1(XI) chain
collagen XI, alpha-1 polypeptide
Gene Type protein-coding
Organism Homo sapiens (human)
Genome

1

1p21

Summary This gene encodes one of the two alpha chains of type XI collagen, a minor fibrillar collagen. Type XI collagen is a heterotrimer but the third alpha chain is a post-translationally modified alpha 1 type II chain. Mutations in this gene are associated with type II Stickler syndrome and with Marshall syndrome. A single-nucleotide polymorphism in this gene is also associated with susceptibility to lumbar disc herniation. Multiple transcript variants have been identified for this gene. [provided by RefSeq, Nov 2009].
Disorder

MIM: 120280

Stickler syndrome, type II, 604841 (3); Marshall syndrome, 154780

mRNA Protein Product Sequence Price Select
NM_001190709, 299523256 NP_001177638, 299523257 collagen alpha-1(XI) chain isoform E preproprotein ORF Sequence $2500.00
NM_001854, 98985805 NP_001845, 98985806 collagen alpha-1(XI) chain isoform A preproprotein ORF Sequence $2500.00
NM_080629, 98985809 NP_542196, 98985810 collagen alpha-1(XI) chain isoform B preproprotein ORF Sequence $2500.00
NM_080630, 299523252 NP_542197, 299523253 collagen alpha-1(XI) chain isoform C preproprotein ORF Sequence $2500.00
KEGG
hsa04510Focal adhesion
hsa04512ECM-receptor interaction
hsa05146Amoebiasis
hsa04974Protein digestion and absorption
hsa04151PI3K-Akt signaling pathway
hsa04611Platelet activation
Reactome
REACT_118779Extracellular matrix organization
REACT_120729Collagen formation
REACT_121139Collagen biosynthesis and modifying enzymes
REACT_150180Assembly of collagen fibrils and other multimeric structures
Homo sapiens (human)COL11A1NP_542196.2
Pan troglodytes (chimpanzee)COL11A1XP_001139974.1
Macaca mulatta (Rhesus monkey)LOC712753XP_002808276.1
Canis lupus familiaris (dog)COL11A1XP_005621909.1
Bos taurus (cattle)COL11A1NP_001159981.1
Mus musculus (house mouse)Col11a1NP_031755.2
Rattus norvegicus (Norway rat)Col11a1NP_037249.1
Gallus gallus (chicken)COL11A1XP_001231624.2
Danio rerio (zebrafish)col11a1aNP_001077313.1
Xenopus (Silurana) tropicalis (western clawed frog)col5a3XP_004913770.1
Process
IDNameEvidence
GO:0001502cartilage condensationIEA
GO:0002063chondrocyte developmentIEA
GO:0006029proteoglycan metabolic processIEA
GO:0007601visual perceptionIMP
GO:0007605sensory perception of soundIMP
GO:0022617extracellular matrix disassemblyTAS
GO:0030198extracellular matrix organizationNAS
GO:0030198extracellular matrix organizationTAS
GO:0030199collagen fibril organizationNAS
GO:0030574collagen catabolic processTAS
GO:0035989tendon developmentIEA
GO:0042472inner ear morphogenesisIEA
GO:0048704embryonic skeletal system morphogenesisIEA
GO:0050910detection of mechanical stimulus involved in sensory perception of soundIMP
GO:0055010ventricular cardiac muscle tissue morphogenesisIEA
Component
IDNameEvidence
GO:0005576extracellular regionTAS
GO:0005592collagen type XI trimerIDA
GO:0005592collagen type XI trimerNAS
GO:0005788endoplasmic reticulum lumenTAS
Function
IDNameEvidence
GO:0005201extracellular matrix structural constituentNAS
GO:0030674protein binding, bridgingNAS
GO:0046872metal ion bindingIEA
GO:0050840extracellular matrix bindingNAS
GeneCards COL11A1
UniProt P12107, Q59HB5
Vega OTTHUMG00000010872
MIM 120280
Ensembl ENSG00000060718
HGNC 2186
HPRD 00375

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Interactant

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