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Homo sapiens pyruvate dehydrogenase (lipoamide) alpha 1 (PDHA1), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.


RefSeq Accession Definition Sequence Price Select
NM_000284 Homo sapiens pyruvate dehydrogenase (lipoamide) alpha 1 (PDHA1), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA. Full Lenth $1186.50
ORF Sequence $340.17


RefSeq Version NM_000284.3, 291084749
Length 3390 bp
Structure linear
Update Date 09-APR-2011
Organism Homo sapiens (human)
Definition Homo sapiens pyruvate dehydrogenase (lipoamide) alpha 1 (PDHA1), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.
Product pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform 1 precursor
Comment

Summary: The pyruvate dehydrogenase (PDH) complex is a nuclear-encoded mitochondrial multienzyme complex that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2), and provides the primary link between glycolysis and the tricarboxylic acid (TCA) cycle. The PDH complex is composed of multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). The E1 enzyme is a heterotetramer of two alpha and two beta subunits. This gene encodes the E1 alpha 1 subunit containing the E1 active site, and plays a key role in the function of the PDH complex. Mutations in this gene are associated with pyruvate dehydrogenase E1-alpha deficiency and X-linked Leigh syndrome. Alternatively spliced transcript variants encoding different isoforms have been found for this gene.


Transcript Variant: This variant (1) represents the predominant transcript and encodes isoform 1.

RefSeq NP_000275.1
CDS 146..1318
Exon (1)1..202
Exon (2)1..202
Exon (3)203..262
Exon (4)263..436
Exon (5)437..563
Exon (6)564..655
Exon (7)656..748
Exon (8)749..904
Exon (9)905..976
Exon (10)977..1044
Exon (11)1045..1153
Exon (12)1154..3372
Translation MRKMLAAVSRVLSGASQKPASRVLVASRNFANDATFEIKKCDLHRLEEGPPVTTVLTRED GLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRA HGFTFTRGLSVREILAELTGRKGGCAKGKGGSMHMYAKNFYGGNGIVGAQVPLGAGIALA CKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAAST DYYKRGDFIPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVS YRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPP LEELGYHIYSSDPPFEVRGANQWIKFKSVS
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Position Chain Variation Link
58+a, gdbSNP:5955751
137+c, tdbSNP:76809608
174+c, gdbSNP:137853257
482+c, tdbSNP:11554111
760+c, gdbSNP:137853254
793+a, cdbSNP:121917898
872+a, tdbSNP:137853255
918+a, cdbSNP:137853253
932+c, gdbSNP:137853259
940+a, c, gdbSNP:1126565
943+a, gdbSNP:35752213
989+a, cdbSNP:2229137
1008+a, gdbSNP:137853258
1049+c, tdbSNP:137853252
1084+, gdbSNP:137853251
1088+a, gdbSNP:137853256
1144+a, cdbSNP:2228067
1278+a, gdbSNP:137853250
1357+c, tdbSNP:111666443
complement(1400)-g, adbSNP:11554112
1428+c, tdbSNP:709610
1637+g, tdbSNP:1042449
1640+a, gdbSNP:1042450
1710+a, gdbSNP:56318063
1716..1717+, catdbSNP:72116174
1719..1720+, catdbSNP:71904180
1825..1826+, ttagtdbSNP:113050549
1932+g, tdbSNP:5955761
2046+c, tdbSNP:1042452
2162+a, gdbSNP:1042453
2331+a, cdbSNP:1042456
2377+a, gdbSNP:15816
2451+c, tdbSNP:61744590
2459+c, tdbSNP:56021619
2695+a, gdbSNP:56039350
2712+c, tdbSNP:55856360
2881+c, gdbSNP:7883708
2903+c, tdbSNP:5955550
complement(2916)-g, cdbSNP:11094770
2985+, adbSNP:67255823
3000+c, tdbSNP:55744630
3123+, adbSNP:67116203
complement(3187)-g, cdbSNP:15943
Gene SymbolPDHA1
Gene SynonymPDHA; PDHCE1A; PHE1A
ChromosomeX
Locus MapXp22.1
All Transcripts NM_000284 , NM_001173454 , NM_001173455 , NM_001173456
Title Novel mutation (R263X) of the E1alpha subunit in pyruvate dehydrogenase complex deficiency .
Author Sato,S., Ioi,H., Kashiwagi,Y., Kawashima,H., Miyajima,T., Naito,E. and Hoshika,A.
Journal Pediatr Int 52 (4), E181-E183 (2010)
Title Mutational study in the PDHA1 gene of 40 patients suspected of pyruvate dehydrogenase complex deficiency .
Author Quintana,E., Gort,L., Busquets,C., Navarro-Sastre,A., Lissens,W., Moliner,S., Lluch,M., Vilaseca,M.A., De Meirleir,L., Ribes,A. and Briones,P.
Journal Clin. Genet. 77 (5), 474-482 (2010)
Title AAV3-mediated transfer and expression of the pyruvate dehydrogenase E1 alpha subunit gene causes metabolic remodeling and apoptosis of human liver cancer cells .
Author Glushakova,L.G., Lisankie,M.J., Eruslanov,E.B., Ojano-Dirain,C., Zolotukhin,I., Liu,C., Srivastava,A. and Stacpoole,P.W.
Journal Mol. Genet. Metab. 98 (3), 289-299 (2009)
Title Pyruvate dehydrogenase deficiency: identification of a novel mutation in the PDHA1 gene which responds to amino acid supplementation .
Author Joao Silva,M., Pinheiro,A., Eusebio,F., Gaspar,A., Tavares de Almeida,I. and Rivera,I.
Journal Eur. J. Pediatr. 168 (1), 17-22 (2009)
Title Two silent substitutions in the PDHA1 gene cause exon 5 skipping by disruption of a putative exonic splicing enhancer .
Author Boichard,A., Venet,L., Naas,T., Boutron,A., Chevret,L., de Baulny,H.O., De Lonlay,P., Legrand,A., Nordman,P. and Brivet,M.
Journal Mol. Genet. Metab. 93 (3), 323-330 (2008)
Title Pyruvate dehydrogenase (PDH) deficiency caused by a 21-base pair insertion mutation in the E1 alpha subunit .
Author De Meirleir,L., Lissens,W., Vamos,E. and Liebaers,I.
Journal Hum. Genet. 88 (6), 649-652 (1992)
Title Mutation of E1 alpha gene in a female patient with pyruvate dehydrogenase deficiency due to rapid degradation of E1 protein .
Author Ito,M., Huq,A.H., Naito,E., Saijo,T., Takeda,E. and Kuroda,Y.
Journal J. Inherit. Metab. Dis. 15 (6), 848-856 (1992)
Title Mutations and polymorphisms in the pyruvate dehydrogenase E1 alpha gene .
Author Dahl,H.H., Brown,G.K., Brown,R.M., Hansen,L.L., Kerr,D.S., Wexler,I.D., Patel,M.S., De Meirleir,L., Lissens,W., Chun,K. et al.
Journal Hum. Mutat. 1 (2), 97-102 (1992)
Title X-linked pyruvate dehydrogenase E1 alpha subunit deficiency in heterozygous females: variable manifestation of the same mutation .
Author Dahl,H.H., Hansen,L.L., Brown,R.M., Danks,D.M., Rogers,J.G. and Brown,G.K.
Journal J. Inherit. Metab. Dis. 15 (6), 835-847 (1992)
Title Characterization of the mutations in three patients with pyruvate dehydrogenase E1 alpha deficiency .
Author Hansen,L.L., Brown,G.K., Kirby,D.M. and Dahl,H.H.
Journal J. Inherit. Metab. Dis. 14 (2), 140-151 (1991)

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