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Homo sapiens colony stimulating factor 1 receptor (CSF1R), mRNA.


RefSeq Accession Definition Sequence Price Select
NM_005211 Homo sapiens colony stimulating factor 1 receptor (CSF1R), mRNA. Full Lenth $1402.10
ORF Sequence $846.51


RefSeq Version NM_005211.3, 195947380
Length 4006 bp
Structure linear
Update Date 13-MAR-2011
Organism Homo sapiens (human)
Definition Homo sapiens colony stimulating factor 1 receptor (CSF1R), mRNA.
Product macrophage colony-stimulating factor 1 receptor precursor
Comment

Summary: The protein encoded by this gene is the receptor for colony stimulating factor 1, a cytokine which controls the production, differentiation, and function of macrophages. This receptor mediates most if not all of the biological effects of this cytokine. Ligand binding activates the receptor kinase through a process of oligomerization and transphosphorylation. The encoded protein is a tyrosine kinase transmembrane receptor and member of the CSF1/PDGF receptor family of tyrosine-protein kinases. Mutations in this gene have been associated with a predisposition to myeloid malignancy. The first intron of this gene contains a transcriptionally inactive ribosomal protein L7 processed pseudogene oriented in the opposite direction. [provided by RefSeq].

RefSeq NP_005202.2
CDS 293..3211
Exon (1)1..112
Exon (2)1..112
Exon (3)113..341
Exon (4)342..599
Exon (5)600..884
Exon (6)885..1021
Exon (7)1022..1181
Exon (8)1182..1374
Exon (9)1375..1490
Exon (10)1491..1611
Exon (11)1612..1802
Exon (12)1803..1918
Exon (13)1919..2045
Exon (14)2046..2150
Exon (15)2151..2261
Exon (16)2262..2424
Exon (17)2425..2513
Exon (18)2514..2611
Exon (19)2612..2734
Exon (20)2735..2846
Exon (21)2847..2946
Exon (22)2947..3055
Exon (23)3056..3989
Translation MGPGVLLLLLVATAWHGQGIPVIEPSVPELVVKPGATVTLRCVGNGSVEWDGPPSPHWTL YSDGSSSILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYVKDPARPWNVLAQEVVVFED QDALLPCLLTDPVLEAGVSLVRVRGRPLMRHTNYSFSPWHGFTIHRAKFIQSQDYQCSAL MGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHN NTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVESAY LNLSSEQNLIQEVTVGEGLNLKVMVEAYPGLQGFNWTYLGPFSDHQPEPKLANATTKDTY RHTFTLSLPRLKPSEAGRYSFLARNPGGWRALTFELTLRYPPEVSVIWTFINGSGTLLCA ASGYPQPNVTWLQCSGHTDRCDEAQVLQVWDDPYPEVLSQEPFHKVTVQSLLTVETLEHN QTYECRAHNSVGSGSWAFIPISAGAHTHPPDEFLFTPVVVACMSIMALLLLLLLLLLYKY KQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEAT AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVL VITEYCCYGDLLNFLRRKAEAMLGPSLSPGQDPEGGVDYKNIHLEKKYVRRDSGFSSQGV DTYVEMRPVSTSSNDSFSEQDLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVA ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWS YGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHR PTFQQICSFLQEQAQEDRRERDYTNLPSSSRSGGSGSSSSELEEESSSEHLTCCEQGDIA QPLLQPNNYQFC
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Position Chain Variation Link
complement(68)-, ctcttcdbSNP:60338145
complement(77)-, ttcctcdbSNP:71864983
complement(81..86)-, ctcttcdbSNP:71952049
complement(84)-t, cdbSNP:114172074
complement(106)-t, cdbSNP:11740408
complement(160)-t, gdbSNP:79669346
complement(168)-t, gdbSNP:79382462
complement(376)-g, adbSNP:216123
385+c, tdbSNP:41424646
complement(387)-c, adbSNP:56048668
complement(470)-g, adbSNP:55865465
complement(484)-g, adbSNP:56282370
complement(574)-g, adbSNP:41287102
complement(586)-g, adbSNP:17652007
complement(610)-t, cdbSNP:111792217
complement(709)-t, cdbSNP:61753457
complement(1013)-t, cdbSNP:79702016
1018+c, tdbSNP:2228422
1025+g, tdbSNP:41338945
complement(1032)-t, gdbSNP:17855673
1127+a, gdbSNP:3829986
1194+a, tdbSNP:121913390
1194+c, tdbSNP:121913391
complement(1353)-g, adbSNP:17854479
complement(1377)-t, cdbSNP:10079250
complement(1529)-t, cdbSNP:34951517
complement(1898)-g, cdbSNP:55942044
1992+c, tdbSNP:41529644
complement(2177)-c, adbSNP:17854478
complement(2374)-t, cdbSNP:56316417
complement(2399)-g, adbSNP:111943087
complement(2407)-t, cdbSNP:3733670
2531+a, gdbSNP:41355444
complement(2635)-t, cdbSNP:55804445
complement(2824)-g, adbSNP:55657214
complement(2827)-g, cdbSNP:56327604
complement(3001)-g, adbSNP:41287094
complement(3052)-g, cdbSNP:34030164
complement(3054)-t, cdbSNP:56059682
complement(3091)-g, adbSNP:41287092
complement(3154)-g, adbSNP:56005231
3197+c, tdbSNP:121913393
3198+a, g, tdbSNP:1801271
3199+a, tdbSNP:121913392
complement(3246..3247)-tg, gadbSNP:35308019
3246+c, tdbSNP:2066933
3247+a, cdbSNP:2066934
complement(3441..3442)-, cdbSNP:66970099
3442..3443+, gdbSNP:3216780
complement(3442)-g, cdbSNP:78449650
complement(3443)-g, cdbSNP:74557364
complement(3443)-, cggdbSNP:72543477
complement(3445)-g, adbSNP:114947856
3521+a, cdbSNP:41497048
3616+c, gdbSNP:1058920
complement(3617)-t, adbSNP:11546510
3723+c, tdbSNP:13117
3798+c, gdbSNP:9727
3846+c, tdbSNP:1058950
3943+a, cdbSNP:12500
complement(3980)-t, cdbSNP:3828609
Gene SymbolCSF1R
Gene SynonymC-FMS; CD115; CSFR; FIM2; FMS
Chromosome5
Locus Map5q32
All Transcripts NM_005211
Title A CSF-1 receptor phosphotyrosine 559 signaling pathway regulates receptor ubiquitination and tyrosine phosphorylation .
Author Xiong,Y., Song,D., Cai,Y., Yu,W., Yeung,Y.G. and Stanley,E.R.
Journal J. Biol. Chem. 286 (2), 952-960 (2011)
Title Posttranscriptional suppression of proto-oncogene c-fms expression by vigilin in breast cancer .
Author Woo,H.H., Yi,X., Lamb,T., Menzl,I., Baker,T., Shapiro,D.J. and Chambers,S.K.
Journal Mol. Cell. Biol. 31 (1), 215-225 (2011)
Title Association between colony-stimulating factor 1 receptor gene polymorphisms and asthma risk .
Author Shin,E.K., Lee,S.H., Cho,S.H., Jung,S., Yoon,S.H., Park,S.W., Park,J.S., Uh,S.T., Kim,Y.K., Kim,Y.H., Choi,J.S., Park,B.L., Shin,H.D. and Park,C.S.
Journal Hum. Genet. 128 (3), 293-302 (2010)
Title Functional overlap but differential expression of CSF-1 and IL-34 in their CSF-1 receptor-mediated regulation of myeloid cells .
Author Wei,S., Nandi,S., Chitu,V., Yeung,Y.G., Yu,W., Huang,M., Williams,L.T., Lin,H. and Stanley,E.R.
Journal J. Leukoc. Biol. 88 (3), 495-505 (2010)
Title Profiling Y561-dependent and -independent substrates of CSF-1R in epithelial cells .
Author Knowlton,M.L., Selfors,L.M., Wrobel,C.N., Gu,T.L., Ballif,B.A., Gygi,S.P., Polakiewicz,R. and Brugge,J.S.
Journal PLoS ONE 5 (10), E13587 (2010)
Title Expression and characterization of the p85 subunit of the phosphatidylinositol 3-kinase complex and a related p85 beta protein by using the baculovirus expression system .
Author Gout,I., Dhand,R., Panayotou,G., Fry,M.J., Hiles,I., Otsu,M. and Waterfield,M.D.
Journal Biochem. J. 288 (PT 2), 395-405 (1992)
Title Localization of the 5' end of the MCF2 oncogene to human chromosome 15q15----q23 .
Author Galland,F., Stefanova,M., Lafage,M. and Birnbaum,D.
Journal Cytogenet. Cell Genet. 60 (2), 114-116 (1992)
Title Myc rescue of a mutant CSF-1 receptor impaired in mitogenic signalling .
Author Roussel,M.F., Cleveland,J.L., Shurtleff,S.A. and Sherr,C.J.
Journal Nature 353 (6342), 361-363 (1991)
Title Interactions of phosphatidylinositol kinase, GTPase-activating protein (GAP), and GAP-associated proteins with the colony-stimulating factor 1 receptor .
Author Reedijk,M., Liu,X.Q. and Pawson,T.
Journal Mol. Cell. Biol. 10 (11), 5601-5608 (1990)
Title FMS mutations in myelodysplastic, leukemic, and normal subjects .
Author Ridge,S.A., Worwood,M., Oscier,D., Jacobs,A. and Padua,R.A.
Journal Proc. Natl. Acad. Sci. U.S.A. 87 (4), 1377-1380 (1990)

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