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Homo sapiens neutrophil cytosolic factor 4, 40kDa (NCF4), transcript variant 2, mRNA.


RefSeq Accession Definition Sequence Price Select
NM_013416 Homo sapiens neutrophil cytosolic factor 4, 40kDa (NCF4), transcript variant 2, mRNA. Full Lenth $477.34
ORF Sequence $303.63


RefSeq Version NM_013416.3, 163644266
Length 1646 bp
Structure linear
Update Date 13-MAR-2011
Organism Homo sapiens (human)
Definition Homo sapiens neutrophil cytosolic factor 4, 40kDa (NCF4), transcript variant 2, mRNA.
Product neutrophil cytosol factor 4 isoform 2
Comment

Summary: The protein encoded by this gene is a cytosolic regulatory component of the superoxide-producing phagocyte NADPH-oxidase, a multicomponent enzyme system important for host defense. This protein is preferentially expressed in cells of myeloid lineage. It interacts primarily with neutrophil cytosolic factor 2 (NCF2/p67-phox) to form a complex with neutrophil cytosolic factor 1 (NCF1/p47-phox), which further interacts with the small G protein RAC1 and translocates to the membrane upon cell stimulation. This complex then activates flavocytochrome b, the membrane-integrated catalytic core of the enzyme system. The PX domain of this protein can bind phospholipid products of the PI(3) kinase, which suggests its role in PI(3) kinase-mediated signaling events. The phosphorylation of this protein was found to negatively regulate the enzyme activity. Alternatively spliced transcript variants encoding distinct isoforms have been observed. [provided by RefSeq].


Transcript Variant: This variant (2) represents the longer transcript and encodes the longer isoform (2). This isoform (2) lacks the PC (Phox and Cdc24p) motif, which may be important for the interaction with NCF2.

RefSeq NP_038202.2
CDS 185..1231
Exon (1)1..216
Exon (2)1..216
Exon (3)217..301
Exon (4)302..455
Exon (5)456..526
Exon (6)527..654
Exon (7)655..712
Exon (8)713..811
Exon (9)812..1253
Exon (10)1254..1643
Translation MAVAQQLRAESDFEQLPDDVAISANIADIEEKRGFTSHFVFVIEVKTKGGSKYLIYRRYR QFHALQSKLEERFGPDSKSSALACTLPTLPAKVYVGVKQEIAEMRIPALNAYMKSLLSLP VWVLMDEDVRIFFYQSPYDSEQVPQALRRLRPRTRKVKSVSPQGNSVDRMAAPRAEALFD FTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKILKDFPEEDDPTNWL RCYYYEDTISTIKSVAWEGGACPAFLPSLRPLPLTSPSHGSLSHSKAPSGSQMSHNAVTS HQRPGWPGQPHSPFPHPTPHFQPDASLLQPVTPLGTSRWRKISAALPY
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Position Chain Variation Link
38+c, tdbSNP:11703711
148+a, gdbSNP:34567417
247+c, tdbSNP:34373276
253+a, gdbSNP:10854695
270+c, tdbSNP:13057803
290+a, cdbSNP:117520448
424+c, tdbSNP:35431748
438+a, cdbSNP:112306225
467+a, gdbSNP:112273712
490+c, tdbSNP:34072404
537+a, gdbSNP:9610595
642+a, gdbSNP:35160112
789+a, gdbSNP:35355915
919+c, tdbSNP:2072712
999+c, tdbSNP:2075939
1326+a, gdbSNP:11552115
1340+a, cdbSNP:5995361
1389+c, tdbSNP:1858
1440+a, gdbSNP:28669668
1460..1461+, cdbSNP:36023462
1529..1530+, gdbSNP:34155264
Gene SymbolNCF4
Gene SynonymMGC3810; NCF; P40PHOX; SH3PXD4
Chromosome22
Locus Map22q13.1
All Transcripts NM_013416 , NM_000631
Title Subcellular localisation of the p40phox component of NADPH oxidase involves direct interactions between the Phox homology domain and F-actin .
Author Shao,D., Segal,A.W. and Dekker,L.V.
Journal Int. J. Biochem. Cell Biol. 42 (10), 1736-1743 (2010)
Title Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study .
Author Bailey,S.D., Xie,C., Do,R., Montpetit,A., Diaz,R., Mohan,V., Keavney,B., Yusuf,S., Gerstein,H.C., Engert,J.C. and Anand,S.
Journal Diabetes Care 33 (10), 2250-2253 (2010)
Title Polymorphisms in innate immunity genes and risk of childhood leukemia .
Author Han,S., Lan,Q., Park,A.K., Lee,K.M., Park,S.K., Ahn,H.S., Shin,H.Y., Kang,H.J., Koo,H.H., Seo,J.J., Choi,J.E., Ahn,Y.O., Chanock,S.J., Kim,H., Rothman,N. and Kang,D.
Journal Hum. Immunol. 71 (7), 727-730 (2010)
Title Risk of meningioma and common variation in genes related to innate immunity .
Author Rajaraman,P., Brenner,A.V., Neta,G., Pfeiffer,R., Wang,S.S., Yeager,M., Thomas,G., Fine,H.A., Linet,M.S., Rothman,N., Chanock,S.J. and Inskip,P.D.
Journal Cancer Epidemiol. Biomarkers Prev. 19 (5), 1356-1361 (2010)
Title Hematologically important mutations: the autosomal recessive forms of chronic granulomatous disease (second update) .
Author Roos,D., Kuhns,D.B., Maddalena,A., Bustamante,J., Kannengiesser,C., de Boer,M., van Leeuwen,K., Koker,M.Y., Wolach,B., Roesler,J., Malech,H.L., Holland,S.M., Gallin,J.I. and Stasia,M.J.
Journal Blood Cells Mol. Dis. 44 (4), 291-299 (2010)
Title Mechanisms of NADPH oxidase activation: translocation of p40phox, Rac1 and Rac2 from the cytosol to the membranes in human neutrophils lacking p47phox or p67phox .
Author Dusi,S., Donini,M. and Rossi,F.
Journal Biochem. J. 314 (PT 2), 409-412 (1996)
Title Assembly of the phagocyte NADPH oxidase: binding of Src homology 3 domains to proline-rich targets .
Author Leto,T.L., Adams,A.G. and de Mendez,I.
Journal Proc. Natl. Acad. Sci. U.S.A. 91 (22), 10650-10654 (1994)
Title A novel cytosolic component, p40phox, of respiratory burst oxidase associates with p67phox and is absent in patients with chronic granulomatous disease who lack p67phox .
Author Tsunawaki,S., Mizunari,H., Nagata,M., Tatsuzawa,O. and Kuratsuji,T.
Journal Biochem. Biophys. Res. Commun. 199 (3), 1378-1387 (1994)
Title p40phox, a third cytosolic component of the activation complex of the NADPH oxidase to contain src homology 3 domains .
Author Wientjes,F.B., Hsuan,J.J., Totty,N.F. and Segal,A.W.
Journal Biochem. J. 296 (PT 3), 557-561 (1993)
Title The essence of operating room nursing. Paramedical personnel .
Author Jones,J.H.
Journal Australas Nurses J 7 (1), 44-45 (1977)

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