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Caenorhabditis elegans CPEB polyA binding family member (cpb-1) (cpb-1) mRNA, complete cds.


RefSeq Accession Definition Sequence Price Select
NM_066650 Caenorhabditis elegans CPEB polyA binding family member (cpb-1) (cpb-1) mRNA, complete cds. Full Lenth $801.50
ORF Sequence $588.00
RefSeq Version NM_066650.4, 193205588
Length 2290 bp
Structure linear
Update Date 13-NOV-2008
Organism Caenorhabditis elegans
Definition Caenorhabditis elegans CPEB polyA binding family member (cpb-1) (cpb-1) mRNA, complete cds.
Product CPEB polyA binding family member (cpb-1)
Comment

COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. The reference sequence was derived from C40H1.1. On Jun 27, 2008 this sequence version replaced gi:133905253. Expression: cpb-1 encodes a cytoplasmic polyadenylation element binding (CPEB) protein homolog involved in two steps of spermatogenesis; two CPEB proteins have distinct functions in spermatogenesis, with FOG-1 specifying sperm cell fate, and CPB-1 conversely executing that decision, being required for progression through meiosis; cpb-1(RNAi) spermatocytes fail to undergo meiotic cell divisions; CPB-1 protein is present in the germ line just prior to overt spermatogenesis, but once sperm differentiation begins, CPB-1 disappears; CPB-1 physically interacts with EBF, which, like CPEB, regulates genes by binding the 3' UTRs of mRNAs; while CPB-1 is required for spermatogenesis, it is dispensable for oogenesis; this is in contrast to CPEBs in vertebrates (Xenopus), arthropods (Drosophila), and molluscs (Spisula), which all participate in oogenesis.


RNAi results: [Sonnichsen B] Not abnormal based on scoring phenotypes embryonic_lethal, organism_morphology_abnormal, maternal_sterile. [Kamath RS] Not abnormal based on scoring phenotypes slow_growth, postembryonic_development_abnormal, embryonic_lethal, larval_lethal, larval_arrest, maternal_sterile, sterile_progeny. [Gonczy P] Not abnormal based on scoring phenotypes postembryonic_development_abnormal, embryonic_development_abnormal. [Rual JF] Not abnormal based on scoring phenotypes postembryonic_development_abnormal, lethal. [Boag PR] Abnormal; the following phenotypes were observed: reduced_brood_size, unclassified. [Luitjens CM] Abnormal; the following phenotypes were observed: spermatocyte_meiosis_abnormal. [Maeda I] Not abnormal based on scoring phenotypes embryonic_lethal, lethal, organism_morphology_abnormal, maternal_sterile.


Expression patterns: CPB-1 protein was detected at high levels in the L4 germ line, in a region just distal to the region that stained by SP56. An identical distribution was observed in males.

RefSeq NP_499051.2
CDS 1..1680
Translation MQYQLSPSGDFKTSAPVRSSHGHRRSTESKKSGGHGNPYLSTDKTNLDISVSFLTSQAQK KMRGMSANHGIFDPTEMLTADDPSNYGYQFLNHATFYNNMDIMQAASGDVPPLMSVNPYK QSFDINDASAAMNMAQFAHTLNAIQNSSYSMSHYNQAPMQHFISPNSFHVSYNQRFPHIK KCNDANRMVEIKKINGHRYMEVTDPQAVSAPPEYKRLDGSLMGVSKSCLEASKKRPISAE PLYSRKVFIGGLPIDVSEEQVWATFGAFGKVLIDWPRRPEHNAERAEQELKKGSGSRAVT GYVFLVFTHERSVQELVNACEFYEDKYYLQLSSPTMTDKAVQVRPWRLSDIDYFCNDNSS VDHRRTVFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAF VRAISGRFVQVNHAENNKRVEIKPYVMEEQYCDECEGRLCKHNYAPYFCGHASCLQYYCE GCWDRMHIGKNEDNKLEDQHYPMVRTGDQTRLLKHLPHRSSGFKPAPVFHPSSQSTTAKI LAYGDQSQRQFSATPSYSF
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Position Chain Variation Link
Gene Symbolcpb-1
Gene Synonymcpb-1
ChromosomeIII
All Transcripts NM_066650
Title Direct Submission .
Author
Journal Submitted (11-AUG-2003) Nematode Sequencing Project, Wellcome Trust Sanger Institute, Hinxton, Cambridge CB10 1SA, UK, and Genome Sequencing Center, Washington University, St. Louis, MO 63110, USA. E-mail: sequence@wormbase.org

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