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Homo sapiens harbinger transposase derived 1 (HARBI1), mRNA.


RefSeq Accession Definition Sequence Price Select
NM_173811 Homo sapiens harbinger transposase derived 1 (HARBI1), mRNA. Full Lenth $443.70
ORF Sequence $304.50


RefSeq Version NM_173811.3, 224549031
Length 1530 bp
Structure linear
Update Date 10-MAR-2011
Organism Homo sapiens (human)
Definition Homo sapiens harbinger transposase derived 1 (HARBI1), mRNA.
Product putative nuclease HARBI1
Comment

COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK057237.1 and BM768489.1. On Mar 5, 2009 this sequence version replaced gi:31341135. COMPLETENESS: complete on the 3' end.

RefSeq NP_776172.1
CDS 249..1298
Exon (1)1..104
Exon (2)1..104
Exon (3)105..918
Exon (4)919..1522
Translation MAIPITVLDCDLLLYGRGHRTLDRFKLDDVTDEYLMSMYGFPRQFIYYLVELLGANLSRP TQRSRAISPETQVLAALGFYTSGSFQTRMGDAIGISQASMSRCVANVTEALVERASQFIR FPADEASIQALKDEFYGLAGMPGVMGVVDCIHVAIKAPNAEDLSYVNRKGLHSLNCLMVC DIRGTLMTVETNWPGSLQDCAVLQQSSLSSQFEAGMHKDSWLLGDSSFFLRTWLMTPLHI PETPAEYRYNMAHSATHSVIEKTFRTLCSRFRCLDGSKGALQYSPEKSSHIILACCVLHN ISLEHGMDVWSSPMTGPMEQPPEEEYEHMESLDLEADRIRQELMLTHFS
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Position Chain Variation Link
complement(136)-g, adbSNP:77282744
complement(276)-g, adbSNP:78052875
complement(373)-g, adbSNP:117030196
complement(493)-g, adbSNP:115211185
complement(895)-g, adbSNP:112306737
complement(1110)-g, adbSNP:75201515
complement(1187)-t, gdbSNP:116645140
complement(1214)-t, cdbSNP:117206351
1238+a, gdbSNP:35569076
complement(1343)-t, gdbSNP:11038934
Gene SymbolHARBI1
Gene SynonymC11orf77; FLJ32675
Chromosome11
Locus Map11p11.2
All Transcripts NM_173811
Title Association of IFIH1 and other autoimmunity risk alleles with selective IgA deficiency .
Author Ferreira,R.C., Pan-Hammarstrom,Q., Graham,R.R., Gateva,V., Fontan,G., Lee,A.T., Ortmann,W., Urcelay,E., Fernandez-Arquero,M., Nunez,C., Jorgensen,G., Ludviksson,B.R., Koskinen,S., Haimila,K., Clark,H.F., Klareskog,L., Gregersen,P.K., Behrens,T.W. and Hammarstrom,L.
Journal Nat. Genet. 42 (9), 777-780 (2010)
Title Transposition of a reconstructed Harbinger element in human cells and functional homology with two transposon-derived cellular genes .
Author Sinzelle,L., Kapitonov,V.V., Grzela,D.P., Jursch,T., Jurka,J., Izsvak,Z. and Ivics,Z.
Journal Proc. Natl. Acad. Sci. U.S.A. 105 (12), 4715-4720 (2008)
Title Transcriptome analysis of human gastric cancer .
Author Oh,J.H., Yang,J.O., Hahn,Y., Kim,M.R., Byun,S.S., Jeon,Y.J., Kim,J.M., Song,K.S., Noh,S.M., Kim,S., Yoo,H.S., Kim,Y.S. and Kim,N.S.
Journal Mamm. Genome 16 (12), 942-954 (2005)
Title Harbinger transposons and an ancient HARBI1 gene derived from a transposase .
Author Kapitonov,V.V. and Jurka,J.
Journal DNA Cell Biol. 23 (5), 311-324 (2004)

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