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Homo sapiens desmoglein 4 (DSG4), transcript variant 2, mRNA.


RefSeq Accession Definition Sequence Price Select
NM_177986 Homo sapiens desmoglein 4 (DSG4), transcript variant 2, mRNA. Full Lenth $1253.00
ORF Sequence $1093.05


RefSeq Version NM_177986.3, 259155289
Length 3580 bp
Structure linear
Update Date 12-MAR-2011
Organism Homo sapiens (human)
Definition Homo sapiens desmoglein 4 (DSG4), transcript variant 2, mRNA.
Product desmoglein-4 isoform 2 preproprotein
Comment

Summary: This gene encodes a member of the desmoglein subgroup of desmosomal cadherins. The encoded protein is a transmembrane component in desmosomes and may play a role in cell-cell adhesion in epithelial cells. Mutations in the gene are associated with localized autosomal recessive hypotrichosis and potentially in other skin disorders. Alternate splicing results in multiple transcript variants. [provided by RefSeq].


Transcript Variant: This variant (2) includes an additional exon and uses an alternate splice acceptor site located in the penultimate exon, compared to variant 1, resulting in a shorter protein isoform (2).

RefSeq NP_817123.1
CDS 136..3258
Exon (1)1..183
Exon (2)1..183
Exon (3)184..219
Exon (4)220..351
Exon (5)352..507
Exon (6)508..652
Exon (7)653..819
Exon (8)820..954
Exon (9)955..1140
Exon (10)1141..1412
Exon (11)1413..1552
Exon (12)1553..1771
Exon (13)1772..2068
Exon (14)2069..2208
Exon (15)2209..2272
Exon (16)2273..2490
Exon (17)2491..3580
Translation MDWLFFRNICLLIILMVVMEVNSEFIVEVKEFDIENGTTKWQTVRRQKREWIKFAAACRE GEDNSKRNPIAKIRSDCESNQKITYRISGVGIDRPPYGVFTINPRTGEINITSVVDREIT PLFLIYCRALNSRGEDLERPLELRVKVMDINDNAPVFSQSVYTASIEENSDANTLVVKLC ATDADEENHLNSKIAYKIVSQEPSGAPMFILNRYTGEVCTMSSFLDREQHSMYNLVVRGS DRDGAADGLSSECDCRIKVLDVNDNFPTLEKTSYSASIEENCLSSELIRLQAIDLDEEGT DNWLAQYLILSGNDGNWFDIQTDPQTNEGILKVVKMLDYEQAPNIQLSIGVKNQADFHYS VASQFQMHPTPVRIQVVDVREGPAFHPSTMAFSVREGIKGSSLLNYVLGTYTAIDLDTGN PATDVRYIIGHDAGSWLKIDSRTGEIQFSREFDKKSKYIINGIYTAEILAIDDGSGKTAT GTICIEVPDINDYCPNIFPERRTICIDSPSVLISVNEHSYGSPFTFCVVDEPPGIADMWD VRSTNATSAILTAKQVLSPGFYEIPILVKDSYNRACELAQMVQLYACDCDDNHMCLDSGA AGIYTEDITGDTYGPVTEDQAGVSNVGLGPAGIGMMVLGILLLILAPLLLLLCCCKQRQP EGLGTRFAPVPEGGEGVMQSWRIEGAHPEDRDVSNICAPMTASNTQDRMDSSEIYTNTYA AGGTVEGGVSGVELNTGMGTAVGLMAAGAAGASGAARKRSSTMGTLRDYADADINMAFLD SYFSEKAYAYADEDEGRPANDCLLIYDHEGVGSPVGSIGCCSWIVDDLDESCMETLDPKF RTLAEICLNTEIEPFPSHQACIPISTDLPLLGPNYFVNESSGLTPSEVEFQEEMAASEPV VHGDIIVTETYGNADPCVQPTTIIFDPQLAPNVVVTEAVMAPVYDIQGNICVPAELADYN NVIYAERVLASPGVPDMSNSSTTEGCMGPVMSGNILVGPEIQVMQMMSPDLPIGQTVGST SPMTSRHRVTRYSNIHYTQQ
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Position Chain Variation Link
35+a, tdbSNP:112913648
84+a, gdbSNP:112493254
156+a, gdbSNP:75549650
165+c, tdbSNP:36101975
371+c, tdbSNP:36040686
393+a, gdbSNP:16959856
552+c, gdbSNP:76399598
595+a, gdbSNP:13381457
630+c, tdbSNP:9956865
937+a, cdbSNP:28380082
958..959+, cdbSNP:34413638
990+a, gdbSNP:35210710
1160+c, tdbSNP:112376128
1237+a, cdbSNP:76349777
1333+a, gdbSNP:35378785
1451+c, tdbSNP:113255372
1562+a, gdbSNP:74896702
1622+a, gdbSNP:117510013
1651+a, gdbSNP:111954087
1674+c, tdbSNP:9945567
1703+c, tdbSNP:34620697
1715+a, gdbSNP:112942400
1739+c, tdbSNP:7229252
1867+c, tdbSNP:113450288
2065+a, cdbSNP:4799570
2226+g, tdbSNP:113413186
2301+a, gdbSNP:74755361
2348+g, tdbSNP:79554307
2353+a, cdbSNP:117814881
2398+a, gdbSNP:11874681
2428+a, gdbSNP:61734847
2526+a, cdbSNP:112653254
2577+c, tdbSNP:73410297
2883+a, gdbSNP:12960081
2917+c, tdbSNP:117748961
3071+a, tdbSNP:112548402
3201+a, c, tdbSNP:7234288
3204+a, gdbSNP:60800275
3289+c, tdbSNP:7234333
3329+a, gdbSNP:57543172
3384+a, gdbSNP:59818622
3398+a, gdbSNP:73953142
3446+a, tdbSNP:116400232
Gene SymbolDSG4
Gene SynonymCDGF13; CDHF13; LAH
Chromosome18
Locus Map18q12.1
All Transcripts NM_177986 , NM_001134453
Title Desmoglein 4 is regulated by transcription factors implicated in hair shaft differentiation .
Author Bazzi,H., Demehri,S., Potter,C.S., Barber,A.G., Awgulewitsch,A., Kopan,R. and Christiano,A.M.
Journal Differentiation 78 (5), 292-300 (2009)
Title Localized autosomal recessive hypotrichosis due to a frameshift mutation in the desmoglein 4 gene exhibits extensive phenotypic variability within a Pakistani family .
Author Wajid,M., Bazzi,H., Rockey,J., Lubetkin,J., Zlotogorski,A. and Christiano,A.M.
Journal J. Invest. Dermatol. 127 (7), 1779-1782 (2007)
Title [Gene fragments cloned and immune recognition studied preliminarily for desmoglein 4 in pemphigus vulgaris] .
Author Li,W., Feng,Y., Lu,X.Y., Li,J.Y. and Ran,Y.P.
Journal Sichuan Da Xue Xue Bao Yi Xue Ban 38 (1), 84-87 (2007)
Title An autosomal recessive form of monilethrix is caused by mutations in DSG4: clinical overlap with localized autosomal recessive hypotrichosis .
Author Zlotogorski,A., Marek,D., Horev,L., Abu,A., Ben-Amitai,D., Gerad,L., Ingber,A., Frydman,M., Reznik-Wolf,H., Vardy,D.A. and Pras,E.
Journal J. Invest. Dermatol. 126 (6), 1292-1296 (2006)
Title Mutations in the desmoglein 4 gene underlie localized autosomal recessive hypotrichosis with monilethrix hairs and congenital scalp erosions .
Author Schaffer,J.V., Bazzi,H., Vitebsky,A., Witkiewicz,A., Kovich,O.I., Kamino,H., Shapiro,L.S., Amin,S.P., Orlow,S.J. and Christiano,A.M.
Journal J. Invest. Dermatol. 126 (6), 1286-1291 (2006)
Title Defining the pathogenic involvement of desmoglein 4 in pemphigus and staphylococcal scalded skin syndrome .
Author Nagasaka,T., Nishifuji,K., Ota,T., Whittock,N.V. and Amagai,M.
Journal J. Clin. Invest. 114 (10), 1484-1492 (2004)
Title A recurrent intragenic deletion in the desmoglein 4 gene underlies localized autosomal recessive hypotrichosis .
Author Moss,C., Martinez-Mir,A., Lam,H., Tadin-Strapps,M., Kljuic,A. and Christiano,A.M.
Journal J. Invest. Dermatol. 123 (3), 607-610 (2004)
Title A recurrent intragenic deletion mutation in DSG4 gene in three Pakistani families with autosomal recessive hypotrichosis .
Author Rafiq,M.A., Ansar,M., Mahmood,S., Haque,S., Faiyaz-ul-Haque,M., Leal,S.M. and Ahmad,W.
Journal J. Invest. Dermatol. 123 (1), 247-248 (2004)
Title Desmoglein 4 in hair follicle differentiation and epidermal adhesion: evidence from inherited hypotrichosis and acquired pemphigus vulgaris .
Author Kljuic,A., Bazzi,H., Sundberg,J.P., Martinez-Mir,A., O'Shaughnessy,R., Mahoney,M.G., Levy,M., Montagutelli,X., Ahmad,W., Aita,V.M., Gordon,D., Uitto,J., Whiting,D., Ott,J., Fischer,S., Gilliam,T.C., Jahoda,C.A., Morris,R.J., Panteleyev,A.A., Nguyen,V.T. and Christiano,A.M.
Journal Cell 113 (2), 249-260 (2003)
Title Genetic evidence for a novel human desmosomal cadherin, desmoglein 4 .
Author Whittock,N.V. and Bower,C.
Journal J. Invest. Dermatol. 120 (4), 523-530 (2003)

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