Reviewed (UniProtKB/Swiss-Prot)

  • THAT AND
  • THAT AND

Reviewed (UniProtKB/Swiss-Prot)





Protein Names
Recommended name:
TNF superfamily member 13;
Alternative name(s):
Protein IDs
(Accession numbers)
UniProtKB
A5HBL5
NCBI RefSeq

NP_001118143.1, NM_001124671.1.

Organism
Latin Name/
(Common Name)
Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).
Taxonomic Identifier (NCBI)
8022
Gene Names
APRIL [GenPool]
GeneID

100136706

Genome
Annotation (Ensembl)
Protein Sequence
SEQUENCE   234 AA;  26743 MW;  819D68BC201CA556 CRC64;
MTNRYTVHFH GSYLLYAVSL FLACLMVLQS NRVREMQVEL RELRQWTSLV CGDIKESSTD
ISRCGISDSH RHTQWNGIRG KREISRHGRR RQRRTGSSAF LHLVPLSSHS YDEDDYTLVE
WALGLSRLGE GLQVFGEKVT VITEGTYFIY SQVLYKDTTW TMGHVIKKRL HGIETILMKC
IQSMPSNITV AQNTCYTAGV HYLEPGSTLE LSIPRKSAGL VLKPHSTFLG MFRI
General annotation
Function
Cofactor
Subunit structure
Subcellular location

Tissue specificity
Induction
Domain
Post-translational modification

Involvement in disease

References
  • "Early Diversification of the Tumor Necrosis Factor Superfamily in Teleosts: Genomic Characterization and Expression Analysis.", Glenney G.W., Wiens G.D., Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases.,

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Protein Domain Databases
InterPro

IPR008983, Tumour_necrosis_fac-like.

IPR006052, TNF_family.

Gene3D

G3DSA:2.60.120.40, Tumour_necrosis_fac-like; 1.

PANTHER
Pfam

PF00229, TNF; 1.

PRINTS
SUPFAM

SSF49842, TNF_like; 1.

PROSITE

PS50049, TNF_2; 1.

3D Structure
Database (PDB)
Entry
Method
Resolution (A)
Chain
Positions
PDBsum
Sequence
Annotation
Feature key
Position(s)
Length
Description
Protein-protein
Interaction
Databases
DIP
IntAct
MINT
STRING
Binary Interactions
With
Entry
#Exp.
IntAct
Enzyme and Pathway Databases
Pathway
Interaction DB
Reactome
Phylogenomic Database
HOVERGEN

HBG105588

InParanoid
OMA
OrthoDB
Proteomics
Database (PRIDE)
Comparative
Toxicogenomics
Database (CTD)

8741

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Phone: 1-877-436-7274 (Toll-Free) 1-732-885-9188
Fax: 1-732-210-0262 1-732-885-5878