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COL1A1 collagen, type I, alpha 1 [Bos taurus (cattle)]

Gene Symbol COL1A1
Entrez Gene ID 282187
Full Name collagen, type I, alpha 1
Synonyms
General protein information
Preferred Names
collagen alpha-1(I) chain
Names
collagen alpha-1(I) chain
alpha-1 type I collagen
Gene Type protein-coding
Organism Bos taurus (cattle)
Genome

19

Summary lac of sum
Disorder MIM:

Disorder Html:
CloneID RefSeq Accession Definition **Vector *Turnaround time Price
OBa29846 XM_005220486 PREDICTED: Bos taurus collagen, type I, alpha 1 (COL1A1), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK Not in stock 25 Starting from $99.00
OBa00449 NM_001034039 Bos taurus collagen, type I, alpha 1 (COL1A1), mRNA. pcDNA3.1-C-(k)DYK Not in stock 25 Starting from $99.00

*Business Day
**You may select a custom vector to replace pcDNA3.1-C-(k)DYK after clone is added to cart.



CloneID OBa29846D
Sequence Information ORF Nucleotide Sequence (Length: 4194bp)
Protein sequence
SNP
Vector pcDNA3.1-C-(k)DYK or customized vector
Clone information Clone Map
Tag on pcDNA3.1-C-(k)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 30-DEC-2014
Organism Bos taurus (cattle)
Product collagen alpha-1(I) chain isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104495.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 30, 2014 this sequence version replaced gi:528995542. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
ATGTTCAGCT TTGTGGACCT CCGGCTCCTG CTCCTCTTAG CGGCCACCGC CCTCCTGACG 
CACGGCCAAG AGGAGGGCCA GGAAGAAGGC CAAGAAGAAG ACATCCCACC AGTCACCTGC
GTACAGAACG GCCTCAGGTA CCATGACCGA GACGTGTGGA AACCCGTGCC CTGCCAGATC
TGTGTCTGCG ACAACGGCAA CGTGCTGTGC GATGACGTGA TCTGCGACGA ACTTAAGGAC
TGTCCTAACG CCAAAGTCCC CACGGACGAA TGCTGCCCCG TCTGCCCCGA AGGCCAGGAA
TCACCCACGG ACCAAGAAAC CACCGGAGTC GAGGGACCGA AAGGAGACAC TGGCCCCCGA
GGCCCAAGGG GACCCGCCGG CCCCCCCGGC CGAGATGGCA TCCCTGGACA ACCTGGACTT
CCCGGACCCC CTGGACCCCC CGGACCTCCC GGACCCCCTG GCCTCGGAGG AAACTTTGCT
CCCCAGTTGT CTTACGGCTA TGATGAGAAA TCAACAGGAA TTTCCGTGCC TGGTCCCATG
GGTCCTTCTG GTCCTCGTGG TCTCCCTGGC CCCCCTGGCG CACCTGGTCC CCAAGGTTTC
CAAGGCCCCC CTGGTGAGCC TGGCGAGCCA GGAGCCTCAG GTCCCATGGG TCCCCGTGGT
CCCCCTGGCC CCCCTGGCAA GAACGGAGAT GATGGCGAAG CTGGAAAGCC TGGTCGTCCT
GGTGAGCGCG GGCCTCCCGG ACCTCAGGGT GCTCGGGGAT TGCCTGGAAC AGCTGGCCTC
CCTGGAATGA AGGGACACAG AGGTTTCAGT GGTTTGGATG GTGCCAAGGG AGATGCTGGT
CCTGCTGGCC CCAAGGGCGA GCCTGGTAGC CCCGGTGAAA ATGGAGCTCC TGGTCAGATG
GGCCCCCGTG GTCTGCCTGG TGAGAGAGGT CGCCCTGGAG CCCCTGGCCC TGCTGGCAAC
CCTGGTGCTG ATGGACAGCC TGGTGCTAAA GGAGCCAATG GCGCTCCTGG TATTGCTGGT
GCTCCTGGCT TCCCTGGTGC CCGAGGCCCC TCTGGACCCC AGGGCCCCAG CGGCCCCCCT
GGCCCCAAGG GTAACAGCGG TGAACCTGGT GCTCCTGGCA GCAAAGGAGA CACTGGCGCC
AAGGGAGAAC CCGGTCCCAC TGGTATTCAA GGCCCCCCTG GCCCCGCTGG GGAAGAAGGA
AAGCGAGGAG CCCGAGGTGA ACCTGGACCT GCTGGCCTGC CTGGACCCCC TGGCGAGCGT
GGTGGACCTG GAAGCCGTGG TTTCCCTGGC GCCGACGGTG TTGCTGGTCC CAAGGGTCCT
GCTGGTGAAC GCGGTGCTCC TGGCCCTGCT GGCCCCAAAG GTTCTCCTGG TGAAGCTGGT
CGCCCCGGTG AAGCTGGTCT GCCCGGTGCC AAGGGTCTGA CTGGAAGCCC TGGCAGCCCG
GGTCCTGATG GCAAAACTGG CCCCCCTGGT CCCGCCGGTC AAGATGGCCG CCCTGGACCT
CCAGGCCCTC CCGGTGCCCG TGGTCAGGCT GGCGTGATGG GTTTCCCTGG ACCTAAAGGT
GCTGCTGGAG AGCCTGGAAA AGCTGGAGAG CGAGGTGTTC CTGGACCCCC TGGCGCTGTT
GGTCCTGCTG GCAAAGACGG AGAAGCTGGA GCTCAGGGAC CCCCAGGACC TGCTGGCCCC
GCTGGTGAGA GAGGCGAACA AGGCCCTGCT GGCTCCCCTG GATTCCAGGG TCTCCCCGGC
CCTGCTGGTC CTCCTGGTGA AGCAGGCAAA CCTGGTGAAC AGGGTGTTCC TGGAGATCTT
GGTGCCCCCG GCCCCTCTGG AGCAAGAGGC GAGAGAGGTT TCCCCGGCGA GCGTGGTGTG
CAAGGGCCGC CCGGTCCTGC AGGTCCCCGT GGGGCCAATG GTGCCCCTGG CAACGATGGT
GCTAAGGGTG ATGCTGGTGC CCCTGGAGCC CCCGGTAGCC AGGGTGCCCC TGGCCTTCAA
GGAATGCCTG GTGAACGAGG TGCAGCTGGT CTTCCAGGCC CTAAGGGTGA CAGAGGGGAT
GCTGGTCCCA AAGGTGCTGA TGGTGCTCCT GGCAAAGATG GCGTCCGTGG TCTGACTGGT
CCCATCGGTC CTCCTGGCCC CGCTGGTGCC CCTGGTGACA AGGGTGAAGC TGGTCCTAGT
GGCCCAGCCG GTCCCACTGG AGCTCGTGGT GCCCCCGGTG ACCGTGGTGA GCCTGGTCCC
CCCGGCCCTG CTGGCTTCGC TGGCCCCCCT GGTGCTGATG GCCAACCTGG TGCTAAAGGC
GAACCTGGTG ATGCTGGTGC TAAAGGTGAC GCTGGTCCCC CCGGCCCTGC TGGGCCCGCT
GGACCCCCCG GCCCCATTGG TAACGTTGGT GCTCCCGGAC CCAAAGGTGC TCGTGGCAGC
GCTGGTCCCC CTGGTGCTAC TGGTTTCCCA GGTGCTGCTG GCCGAGTCGG TCCCCCCGGC
CCCTCTGGAA ATGCTGGACC CCCTGGCCCT CCTGGCCCTG CTGGCAAAGA AGGCAGCAAA
GGCCCCCGCG GTGAGACTGG CCCCGCTGGG CGTCCCGGTG AAGTCGGTCC CCCTGGTCCC
CCTGGCCCCG CTGGTGAGAA AGGAGCCCCT GGTGCTGACG GACCTGCTGG AGCTCCTGGC
ACTCCTGGAC CTCAAGGTAT TGCTGGACAG CGTGGTGTGG TCGGCCTGCC TGGTCAGAGA
GGAGAAAGAG GCTTCCCTGG TCTTCCTGGC CCCTCTGGTG AACCCGGCAA ACAAGGTCCT
TCTGGAGCAA GTGGTGAACG TGGCCCCCCT GGTCCCATGG GCCCCCCTGG ATTGGCTGGA
CCCCCTGGCG AGTCTGGACG TGAGGGAGCT CCTGGTGCTG AAGGATCCCC TGGACGAGAT
GGTTCTCCTG GCGCCAAGGG TGACCGTGGT GAGACCGGCC CTGCTGGACC TCCTGGTGCT
CCTGGCGCTC CCGGTGCCCC CGGCCCTGTC GGACCTGCCG GCAAGAGCGG TGATCGTGGT
GAGACCGGTC CTGCTGGTCC TGCTGGTCCC ATTGGCCCCG TTGGTGCCCG TGGCCCCGCT
GGACCCCAAG GCCCCCGTGG TGACAAGGGT GAGACAGGCG AACAGGGCGA CAGAGGCATT
AAGGGTCACC GTGGCTTCTC TGGTCTCCAG GGTCCCCCCG GCCCTCCCGG CTCTCCTGGT
GAGCAAGGTC CTTCCGGAGC CTCTGGTCCT GCTGGTCCCC GCGGTCCCCC TGGCTCTGCT
GGTTCTCCCG GCAAAGATGG ACTCAATGGT CTCCCAGGCC CCATCGGTCC CCCTGGGCCT
CGAGGTCGCA CTGGTGATGC TGGTCCTGCT GGTCCTCCCG GCCCTCCTGG ACCCCCTGGT
CCCCCAGGTC CTCCCAGCGG CGGCTACGAC TTGAGCTTCC TGCCCCAGCC ACCTCAAGAG
AAGGCTCACG ATGGTGGCCG CTACTACCGG GCTGATGATG CCAATGTGGT CCGTGACCGT
GACCTCGAGG TGGACACCAC CCTCAAGAGC CTGAGCCAGC AGATCGAGAA CATCCGGAGC
CCTGAAGGCA GCCGCAAGAA CCCCGCCCGC ACCTGCCGTG ACCTCAAGAT GTGCCACTCT
GACTGGAAGA GCGGAGAATA CTGGATTGAC CCCAACCAAG GCTGCAACCT GGATGCCATT
AAGGTCTTCT GCAACATGGA AACCGGTGAG ACCTGTGTAT ACCCCACTCA GCCCAGCGTG
GCCCAGAAGA ACTGGTATAT CAGCAAGAAC CCCAAGGAAA AGAGGCACGT CTGGTACGGC
GAGAGCATGA CCGGCGGATT CCAGTTCGAG TATGGCGGCC AGGGGTCCGA TCCTGCCGAT
GTGGCCATCC AGCTGACTTT CCTGCGCCTG ATGTCCACCG AGGCCTCCCA GAACATCACC
TACCACTGCA AGAACAGCGT GGCCTACATG GACCAGCAGA CTGGCAACCT CAAGAAGGCC
CTGCTCCTCC AGGGCTCCAA CGAGATCGAG ATCCGGGCCG AGGGCAACAG CCGCTTCACC
TACAGCGTCA CCTACGATGG CTGCACGAGT CACACCGGAG CCTGGGGCAA GACAGTGATC
GAATACAAAA CCACCAAGAC CTCCCGCTTG CCCATCATCG ATGTGGCCCC CTTGGACGTT
GGCGCCCCAG ACCAGGAATT CGGCTTCGAC GTTGGCCCTG CCTGCTTCCT GTAA
The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.
RefSeqXP_005220543.1
CDS129..4322
Misc Feature(1)246..413(+)
Misc Feature(2)831..1010(+)
Misc Feature(3)957..1136(+)
Misc Feature(4)1047..1280(+)
Misc Feature(5)1281..1532(+)
Misc Feature(6)1452..1613(+)
Misc Feature(7)1533..1748(+)
Misc Feature(8)1929..2102(+)
Misc Feature(9)2028..2204(+)
Misc Feature(10)3609..4319(+)
Translation
Position Chain Variation Link

Target ORF information:

RefSeq Version XM_005220486
Organism Bos taurus (cattle)
Definition PREDICTED: Bos taurus collagen, type I, alpha 1 (COL1A1), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1-C-(k)DYK
XM_005220486

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
ATGTTCAGCT TTGTGGACCT CCGGCTCCTG CTCCTCTTAG CGGCCACCGC CCTCCTGACG 
CACGGCCAAG AGGAGGGCCA GGAAGAAGGC CAAGAAGAAG ACATCCCACC AGTCACCTGC
GTACAGAACG GCCTCAGGTA CCATGACCGA GACGTGTGGA AACCCGTGCC CTGCCAGATC
TGTGTCTGCG ACAACGGCAA CGTGCTGTGC GATGACGTGA TCTGCGACGA ACTTAAGGAC
TGTCCTAACG CCAAAGTCCC CACGGACGAA TGCTGCCCCG TCTGCCCCGA AGGCCAGGAA
TCACCCACGG ACCAAGAAAC CACCGGAGTC GAGGGACCGA AAGGAGACAC TGGCCCCCGA
GGCCCAAGGG GACCCGCCGG CCCCCCCGGC CGAGATGGCA TCCCTGGACA ACCTGGACTT
CCCGGACCCC CTGGACCCCC CGGACCTCCC GGACCCCCTG GCCTCGGAGG AAACTTTGCT
CCCCAGTTGT CTTACGGCTA TGATGAGAAA TCAACAGGAA TTTCCGTGCC TGGTCCCATG
GGTCCTTCTG GTCCTCGTGG TCTCCCTGGC CCCCCTGGCG CACCTGGTCC CCAAGGTTTC
CAAGGCCCCC CTGGTGAGCC TGGCGAGCCA GGAGCCTCAG GTCCCATGGG TCCCCGTGGT
CCCCCTGGCC CCCCTGGCAA GAACGGAGAT GATGGCGAAG CTGGAAAGCC TGGTCGTCCT
GGTGAGCGCG GGCCTCCCGG ACCTCAGGGT GCTCGGGGAT TGCCTGGAAC AGCTGGCCTC
CCTGGAATGA AGGGACACAG AGGTTTCAGT GGTTTGGATG GTGCCAAGGG AGATGCTGGT
CCTGCTGGCC CCAAGGGCGA GCCTGGTAGC CCCGGTGAAA ATGGAGCTCC TGGTCAGATG
GGCCCCCGTG GTCTGCCTGG TGAGAGAGGT CGCCCTGGAG CCCCTGGCCC TGCTGGCAAC
CCTGGTGCTG ATGGACAGCC TGGTGCTAAA GGAGCCAATG GCGCTCCTGG TATTGCTGGT
GCTCCTGGCT TCCCTGGTGC CCGAGGCCCC TCTGGACCCC AGGGCCCCAG CGGCCCCCCT
GGCCCCAAGG GTAACAGCGG TGAACCTGGT GCTCCTGGCA GCAAAGGAGA CACTGGCGCC
AAGGGAGAAC CCGGTCCCAC TGGTATTCAA GGCCCCCCTG GCCCCGCTGG GGAAGAAGGA
AAGCGAGGAG CCCGAGGTGA ACCTGGACCT GCTGGCCTGC CTGGACCCCC TGGCGAGCGT
GGTGGACCTG GAAGCCGTGG TTTCCCTGGC GCCGACGGTG TTGCTGGTCC CAAGGGTCCT
GCTGGTGAAC GCGGTGCTCC TGGCCCTGCT GGCCCCAAAG GTTCTCCTGG TGAAGCTGGT
CGCCCCGGTG AAGCTGGTCT GCCCGGTGCC AAGGGTCTGA CTGGAAGCCC TGGCAGCCCG
GGTCCTGATG GCAAAACTGG CCCCCCTGGT CCCGCCGGTC AAGATGGCCG CCCTGGACCT
CCAGGCCCTC CCGGTGCCCG TGGTCAGGCT GGCGTGATGG GTTTCCCTGG ACCTAAAGGT
GCTGCTGGAG AGCCTGGAAA AGCTGGAGAG CGAGGTGTTC CTGGACCCCC TGGCGCTGTT
GGTCCTGCTG GCAAAGACGG AGAAGCTGGA GCTCAGGGAC CCCCAGGACC TGCTGGCCCC
GCTGGTGAGA GAGGCGAACA AGGCCCTGCT GGCTCCCCTG GATTCCAGGG TCTCCCCGGC
CCTGCTGGTC CTCCTGGTGA AGCAGGCAAA CCTGGTGAAC AGGGTGTTCC TGGAGATCTT
GGTGCCCCCG GCCCCTCTGG AGCAAGAGGC GAGAGAGGTT TCCCCGGCGA GCGTGGTGTG
CAAGGGCCGC CCGGTCCTGC AGGTCCCCGT GGGGCCAATG GTGCCCCTGG CAACGATGGT
GCTAAGGGTG ATGCTGGTGC CCCTGGAGCC CCCGGTAGCC AGGGTGCCCC TGGCCTTCAA
GGAATGCCTG GTGAACGAGG TGCAGCTGGT CTTCCAGGCC CTAAGGGTGA CAGAGGGGAT
GCTGGTCCCA AAGGTGCTGA TGGTGCTCCT GGCAAAGATG GCGTCCGTGG TCTGACTGGT
CCCATCGGTC CTCCTGGCCC CGCTGGTGCC CCTGGTGACA AGGGTGAAGC TGGTCCTAGT
GGCCCAGCCG GTCCCACTGG AGCTCGTGGT GCCCCCGGTG ACCGTGGTGA GCCTGGTCCC
CCCGGCCCTG CTGGCTTCGC TGGCCCCCCT GGTGCTGATG GCCAACCTGG TGCTAAAGGC
GAACCTGGTG ATGCTGGTGC TAAAGGTGAC GCTGGTCCCC CCGGCCCTGC TGGGCCCGCT
GGACCCCCCG GCCCCATTGG TAACGTTGGT GCTCCCGGAC CCAAAGGTGC TCGTGGCAGC
GCTGGTCCCC CTGGTGCTAC TGGTTTCCCA GGTGCTGCTG GCCGAGTCGG TCCCCCCGGC
CCCTCTGGAA ATGCTGGACC CCCTGGCCCT CCTGGCCCTG CTGGCAAAGA AGGCAGCAAA
GGCCCCCGCG GTGAGACTGG CCCCGCTGGG CGTCCCGGTG AAGTCGGTCC CCCTGGTCCC
CCTGGCCCCG CTGGTGAGAA AGGAGCCCCT GGTGCTGACG GACCTGCTGG AGCTCCTGGC
ACTCCTGGAC CTCAAGGTAT TGCTGGACAG CGTGGTGTGG TCGGCCTGCC TGGTCAGAGA
GGAGAAAGAG GCTTCCCTGG TCTTCCTGGC CCCTCTGGTG AACCCGGCAA ACAAGGTCCT
TCTGGAGCAA GTGGTGAACG TGGCCCCCCT GGTCCCATGG GCCCCCCTGG ATTGGCTGGA
CCCCCTGGCG AGTCTGGACG TGAGGGAGCT CCTGGTGCTG AAGGATCCCC TGGACGAGAT
GGTTCTCCTG GCGCCAAGGG TGACCGTGGT GAGACCGGCC CTGCTGGACC TCCTGGTGCT
CCTGGCGCTC CCGGTGCCCC CGGCCCTGTC GGACCTGCCG GCAAGAGCGG TGATCGTGGT
GAGACCGGTC CTGCTGGTCC TGCTGGTCCC ATTGGCCCCG TTGGTGCCCG TGGCCCCGCT
GGACCCCAAG GCCCCCGTGG TGACAAGGGT GAGACAGGCG AACAGGGCGA CAGAGGCATT
AAGGGTCACC GTGGCTTCTC TGGTCTCCAG GGTCCCCCCG GCCCTCCCGG CTCTCCTGGT
GAGCAAGGTC CTTCCGGAGC CTCTGGTCCT GCTGGTCCCC GCGGTCCCCC TGGCTCTGCT
GGTTCTCCCG GCAAAGATGG ACTCAATGGT CTCCCAGGCC CCATCGGTCC CCCTGGGCCT
CGAGGTCGCA CTGGTGATGC TGGTCCTGCT GGTCCTCCCG GCCCTCCTGG ACCCCCTGGT
CCCCCAGGTC CTCCCAGCGG CGGCTACGAC TTGAGCTTCC TGCCCCAGCC ACCTCAAGAG
AAGGCTCACG ATGGTGGCCG CTACTACCGG GCTGATGATG CCAATGTGGT CCGTGACCGT
GACCTCGAGG TGGACACCAC CCTCAAGAGC CTGAGCCAGC AGATCGAGAA CATCCGGAGC
CCTGAAGGCA GCCGCAAGAA CCCCGCCCGC ACCTGCCGTG ACCTCAAGAT GTGCCACTCT
GACTGGAAGA GCGGAGAATA CTGGATTGAC CCCAACCAAG GCTGCAACCT GGATGCCATT
AAGGTCTTCT GCAACATGGA AACCGGTGAG ACCTGTGTAT ACCCCACTCA GCCCAGCGTG
GCCCAGAAGA ACTGGTATAT CAGCAAGAAC CCCAAGGAAA AGAGGCACGT CTGGTACGGC
GAGAGCATGA CCGGCGGATT CCAGTTCGAG TATGGCGGCC AGGGGTCCGA TCCTGCCGAT
GTGGCCATCC AGCTGACTTT CCTGCGCCTG ATGTCCACCG AGGCCTCCCA GAACATCACC
TACCACTGCA AGAACAGCGT GGCCTACATG GACCAGCAGA CTGGCAACCT CAAGAAGGCC
CTGCTCCTCC AGGGCTCCAA CGAGATCGAG ATCCGGGCCG AGGGCAACAG CCGCTTCACC
TACAGCGTCA CCTACGATGG CTGCACGAGT CACACCGGAG CCTGGGGCAA GACAGTGATC
GAATACAAAA CCACCAAGAC CTCCCGCTTG CCCATCATCG ATGTGGCCCC CTTGGACGTT
GGCGCCCCAG ACCAGGAATT CGGCTTCGAC GTTGGCCCTG CCTGCTTCCT GTAA

The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.


CloneID OBa00449D
Sequence Information ORF Nucleotide Sequence (Length: 4392bp)
Protein sequence
SNP
Vector pcDNA3.1-C-(k)DYK or customized vector
Clone information Clone Map
Tag on pcDNA3.1-C-(k)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 04-JAN-2015
Organism Bos taurus (cattle)
Product collagen alpha-1(I) chain precursor
Comment PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC105184.1. On Aug 31, 2012 this sequence version replaced gi:77404251. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC105184.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00000728, SAMN01093727 [ECO:0000348] ##Evidence-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
ATGTTCAGCT TTGTGGACCT CCGGCTCCTG CTCCTCTTAG CGGCCACCGC CCTCCTGACG 
CACGGCCAAG AGGAGGGCCA GGAAGAAGGC CAAGAAGAAG ACATCCCACC AGTCACCTGC
GTACAGAACG GCCTCAGGTA CCATGACCGA GACGTGTGGA AACCCGTGCC CTGCCAGATC
TGTGTCTGCG ACAACGGCAA CGTGCTGTGC GATGACGTGA TCTGCGACGA ACTTAAGGAC
TGTCCTAACG CCAAAGTCCC CACGGACGAA TGCTGCCCCG TCTGCCCCGA AGGCCAGGAA
TCACCCACGG ACCAAGAAAC CACCGGAGTC GAGGGACCGA AAGGAGACAC TGGCCCCCGA
GGCCCAAGGG GACCCGCCGG CCCCCCCGGC CGAGATGGCA TCCCTGGACA ACCTGGACTT
CCCGGACCCC CTGGACCCCC CGGACCTCCC GGACCCCCTG GCCTCGGAGG AAACTTTGCT
CCCCAGTTGT CTTACGGCTA TGATGAGAAA TCAACAGGAA TTTCCGTGCC TGGTCCCATG
GGTCCTTCTG GTCCTCGTGG TCTCCCTGGC CCCCCTGGCG CACCTGGTCC CCAAGGTTTC
CAAGGCCCCC CTGGTGAGCC TGGCGAGCCA GGAGCCTCAG GTCCCATGGG TCCCCGTGGT
CCCCCTGGCC CCCCTGGCAA GAACGGAGAT GATGGCGAAG CTGGAAAGCC TGGTCGTCCT
GGTGAGCGCG GGCCTCCCGG ACCTCAGGGT GCTCGGGGAT TGCCTGGAAC AGCTGGCCTC
CCTGGAATGA AGGGACACAG AGGTTTCAGT GGTTTGGATG GTGCCAAGGG AGATGCTGGT
CCTGCTGGCC CCAAGGGCGA GCCTGGTAGC CCCGGTGAAA ATGGAGCTCC TGGTCAGATG
GGCCCCCGTG GTCTGCCTGG TGAGAGAGGT CGCCCTGGAG CCCCTGGCCC TGCTGGTGCT
CGAGGAAATG ATGGTGCGAC TGGTGCTGCT GGGCCCCCTG GTCCCACTGG CCCCGCTGGT
CCTCCTGGTT TCCCTGGTGC TGTGGGTGCT AAGGGTGAAG GTGGTCCCCA AGGACCCCGA
GGTTCTGAAG GTCCCCAGGG TGTACGTGGT GAGCCTGGCC CCCCTGGCCC TGCTGGTGCT
GCTGGCCCTG CTGGCAACCC TGGTGCTGAT GGACAGCCTG GTGCTAAAGG AGCCAATGGC
GCTCCTGGTA TTGCTGGTGC TCCTGGCTTC CCTGGTGCCC GAGGCCCCTC TGGACCCCAG
GGCCCCAGCG GCCCCCCTGG CCCCAAGGGT AACAGCGGTG AACCTGGTGC TCCTGGCAGC
AAAGGAGACA CTGGCGCCAA GGGAGAACCC GGTCCCACTG GTATTCAAGG CCCCCCTGGC
CCCGCTGGGG AAGAAGGAAA GCGAGGAGCC CGAGGTGAAC CTGGACCTGC TGGCCTGCCT
GGACCCCCTG GCGAGCGTGG TGGACCTGGA AGCCGTGGTT TCCCTGGCGC CGACGGTGTT
GCTGGTCCCA AGGGTCCTGC TGGTGAACGC GGTGCTCCTG GCCCTGCTGG CCCCAAAGGT
TCTCCTGGTG AAGCTGGTCG CCCCGGTGAA GCTGGTCTGC CCGGTGCCAA GGGTCTGACT
GGAAGCCCTG GCAGCCCGGG TCCTGATGGC AAAACTGGCC CCCCTGGTCC CGCCGGTCAA
GATGGCCGCC CTGGACCTCC AGGCCCTCCC GGTGCCCGTG GTCAGGCTGG CGTGATGGGT
TTCCCTGGAC CTAAAGGTGC TGCTGGAGAG CCTGGAAAAG CTGGAGAGCG AGGTGTTCCT
GGACCCCCTG GCGCTGTTGG TCCTGCTGGC AAAGACGGAG AAGCTGGAGC TCAGGGACCC
CCAGGACCTG CTGGCCCCGC TGGTGAGAGA GGCGAACAAG GCCCTGCTGG CTCCCCTGGA
TTCCAGGGTC TCCCCGGCCC TGCTGGTCCT CCTGGTGAAG CAGGCAAACC TGGTGAACAG
GGTGTTCCTG GAGATCTTGG TGCCCCCGGC CCCTCTGGAG CAAGAGGCGA GAGAGGTTTC
CCCGGCGAGC GTGGTGTGCA AGGGCCGCCC GGTCCTGCAG GTCCCCGTGG GGCCAATGGT
GCCCCTGGCA ACGATGGTGC TAAGGGTGAT GCTGGTGCCC CTGGAGCCCC CGGTAGCCAG
GGTGCCCCTG GCCTTCAAGG AATGCCTGGT GAACGAGGTG CAGCTGGTCT TCCAGGCCCT
AAGGGTGACA GAGGGGATGC TGGTCCCAAA GGTGCTGATG GTGCTCCTGG CAAAGATGGC
GTCCGTGGTC TGACTGGTCC CATCGGTCCT CCTGGCCCCG CTGGTGCCCC TGGTGACAAG
GGTGAAGCTG GTCCTAGTGG CCCAGCCGGT CCCACTGGAG CTCGTGGTGC CCCCGGTGAC
CGTGGTGAGC CTGGTCCCCC CGGCCCTGCT GGCTTCGCTG GCCCCCCTGG TGCTGATGGC
CAACCTGGTG CTAAAGGCGA ACCTGGTGAT GCTGGTGCTA AAGGTGACGC TGGTCCCCCC
GGCCCTGCTG GGCCCGCTGG ACCCCCCGGC CCCATTGGTA ACGTTGGTGC TCCCGGACCC
AAAGGTGCTC GTGGCAGCGC TGGTCCCCCT GGTGCTACTG GTTTCCCAGG TGCTGCTGGC
CGAGTCGGTC CCCCCGGCCC CTCTGGAAAT GCTGGACCCC CTGGCCCTCC TGGCCCTGCT
GGCAAAGAAG GCAGCAAAGG CCCCCGCGGT GAGACTGGCC CCGCTGGGCG TCCCGGTGAA
GTCGGTCCCC CTGGTCCCCC TGGCCCCGCT GGTGAGAAAG GAGCCCCTGG TGCTGACGGA
CCTGCTGGAG CTCCTGGCAC TCCTGGACCT CAAGGTATTG CTGGACAGCG TGGTGTGGTC
GGCCTGCCTG GTCAGAGAGG AGAAAGAGGC TTCCCTGGTC TTCCTGGCCC CTCTGGTGAA
CCCGGCAAAC AAGGTCCTTC TGGAGCAAGT GGTGAACGTG GCCCCCCTGG TCCCATGGGC
CCCCCTGGAT TGGCTGGACC CCCTGGCGAG TCTGGACGTG AGGGAGCTCC TGGTGCTGAA
GGATCCCCTG GACGAGATGG TTCTCCTGGC GCCAAGGGTG ACCGTGGTGA GACCGGCCCT
GCTGGACCTC CTGGTGCTCC TGGCGCTCCC GGTGCCCCCG GCCCTGTCGG ACCTGCCGGC
AAGAGCGGTG ATCGTGGTGA GACCGGTCCT GCTGGTCCTG CTGGTCCCAT TGGCCCCGTT
GGTGCCCGTG GCCCCGCTGG ACCCCAAGGC CCCCGTGGTG ACAAGGGTGA GACAGGCGAA
CAGGGCGACA GAGGCATTAA GGGTCACCGT GGCTTCTCTG GTCTCCAGGG TCCCCCCGGC
CCTCCCGGCT CTCCTGGTGA GCAAGGTCCT TCCGGAGCCT CTGGTCCTGC TGGTCCCCGC
GGTCCCCCTG GCTCTGCTGG TTCTCCCGGC AAAGATGGAC TCAATGGTCT CCCAGGCCCC
ATCGGTCCCC CTGGGCCTCG AGGTCGCACT GGTGATGCTG GTCCTGCTGG TCCTCCCGGC
CCTCCTGGAC CCCCTGGTCC CCCAGGTCCT CCCAGCGGCG GCTACGACTT GAGCTTCCTG
CCCCAGCCAC CTCAAGAGAA GGCTCACGAT GGTGGCCGCT ACTACCGGGC TGATGATGCC
AATGTGGTCC GTGACCGTGA CCTCGAGGTG GACACCACCC TCAAGAGCCT GAGCCAGCAG
ATCGAGAACA TCCGGAGCCC TGAAGGCAGC CGCAAGAACC CCGCCCGCAC CTGCCGTGAC
CTCAAGATGT GCCACTCTGA CTGGAAGAGC GGAGAATACT GGATTGACCC CAACCAAGGC
TGCAACCTGG ATGCCATTAA GGTCTTCTGC AACATGGAAA CCGGTGAGAC CTGTGTATAC
CCCACTCAGC CCAGCGTGGC CCAGAAGAAC TGGTATATCA GCAAGAACCC CAAGGAAAAG
AGGCACGTCT GGTACGGCGA GAGCATGACC GGCGGATTCC AGTTCGAGTA TGGCGGCCAG
GGGTCCGATC CTGCCGATGT GGCCATCCAG CTGACTTTCC TGCGCCTGAT GTCCACCGAG
GCCTCCCAGA ACATCACCTA CCACTGCAAG AACAGCGTGG CCTACATGGA CCAGCAGACT
GGCAACCTCA AGAAGGCCCT GCTCCTCCAG GGCTCCAACG AGATCGAGAT CCGGGCCGAG
GGCAACAGCC GCTTCACCTA CAGCGTCACC TACGATGGCT GCACGAGTCA CACCGGAGCC
TGGGGCAAGA CAGTGATCGA ATACAAAACC ACCAAGACCT CCCGCTTGCC CATCATCGAT
GTGGCCCCCT TGGACGTTGG CGCCCCAGAC CAGGAATTCG GCTTCGACGT TGGCCCTGCC
TGCTTCCTGTT AA
The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.
RefSeqNP_001029211.1
CDS119..4510
Misc Feature(1)107..109(+)
Misc Feature(2)236..403(+)
Misc Feature(3)602..649(+)
Misc Feature(4)602..604(+)
Misc Feature(5)626..628(+)
Misc Feature(6)650..3691(+)
Misc Feature(7)821..1000(+)
Misc Feature(8)908..910(+)
Misc Feature(9)929..1087(+)
Misc Feature(10)1469..1720(+)
Misc Feature(11)1640..1801(+)
Misc Feature(12)1721..1900(+)
Misc Feature(13)2117..2290(+)
Misc Feature(14)2216..2392(+)
Misc Feature(15)2348..2356(+)
Misc Feature(16)3392..3400(+)
Misc Feature(17)3605..3607(+)
Misc Feature(18)3692..3763(+)
Misc Feature(19)3797..4507(+)
Translation
Position Chain Variation Link
80 80 a, c dbSNP:383651912
841 841 c, t dbSNP:209142203
2476 2476 a, g dbSNP:110819475
2528 2528 c, t dbSNP:381398136
2764 2764 c, t dbSNP:210978194
3476 3476 c, g dbSNP:41912652
3484 3484 c, g dbSNP:209650490
3625 3625 a, c dbSNP:208029458
3705 3705 a, c dbSNP:137171404
4142 4142 g, t dbSNP:135505686
4336 4336 c, t dbSNP:41912653
4480 4480 c, t dbSNP:209951076

Target ORF information:

RefSeq Version NM_001034039
Organism Bos taurus (cattle)
Definition Bos taurus collagen, type I, alpha 1 (COL1A1), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1-C-(k)DYK
NM_001034039

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
ATGTTCAGCT TTGTGGACCT CCGGCTCCTG CTCCTCTTAG CGGCCACCGC CCTCCTGACG 
CACGGCCAAG AGGAGGGCCA GGAAGAAGGC CAAGAAGAAG ACATCCCACC AGTCACCTGC
GTACAGAACG GCCTCAGGTA CCATGACCGA GACGTGTGGA AACCCGTGCC CTGCCAGATC
TGTGTCTGCG ACAACGGCAA CGTGCTGTGC GATGACGTGA TCTGCGACGA ACTTAAGGAC
TGTCCTAACG CCAAAGTCCC CACGGACGAA TGCTGCCCCG TCTGCCCCGA AGGCCAGGAA
TCACCCACGG ACCAAGAAAC CACCGGAGTC GAGGGACCGA AAGGAGACAC TGGCCCCCGA
GGCCCAAGGG GACCCGCCGG CCCCCCCGGC CGAGATGGCA TCCCTGGACA ACCTGGACTT
CCCGGACCCC CTGGACCCCC CGGACCTCCC GGACCCCCTG GCCTCGGAGG AAACTTTGCT
CCCCAGTTGT CTTACGGCTA TGATGAGAAA TCAACAGGAA TTTCCGTGCC TGGTCCCATG
GGTCCTTCTG GTCCTCGTGG TCTCCCTGGC CCCCCTGGCG CACCTGGTCC CCAAGGTTTC
CAAGGCCCCC CTGGTGAGCC TGGCGAGCCA GGAGCCTCAG GTCCCATGGG TCCCCGTGGT
CCCCCTGGCC CCCCTGGCAA GAACGGAGAT GATGGCGAAG CTGGAAAGCC TGGTCGTCCT
GGTGAGCGCG GGCCTCCCGG ACCTCAGGGT GCTCGGGGAT TGCCTGGAAC AGCTGGCCTC
CCTGGAATGA AGGGACACAG AGGTTTCAGT GGTTTGGATG GTGCCAAGGG AGATGCTGGT
CCTGCTGGCC CCAAGGGCGA GCCTGGTAGC CCCGGTGAAA ATGGAGCTCC TGGTCAGATG
GGCCCCCGTG GTCTGCCTGG TGAGAGAGGT CGCCCTGGAG CCCCTGGCCC TGCTGGTGCT
CGAGGAAATG ATGGTGCGAC TGGTGCTGCT GGGCCCCCTG GTCCCACTGG CCCCGCTGGT
CCTCCTGGTT TCCCTGGTGC TGTGGGTGCT AAGGGTGAAG GTGGTCCCCA AGGACCCCGA
GGTTCTGAAG GTCCCCAGGG TGTACGTGGT GAGCCTGGCC CCCCTGGCCC TGCTGGTGCT
GCTGGCCCTG CTGGCAACCC TGGTGCTGAT GGACAGCCTG GTGCTAAAGG AGCCAATGGC
GCTCCTGGTA TTGCTGGTGC TCCTGGCTTC CCTGGTGCCC GAGGCCCCTC TGGACCCCAG
GGCCCCAGCG GCCCCCCTGG CCCCAAGGGT AACAGCGGTG AACCTGGTGC TCCTGGCAGC
AAAGGAGACA CTGGCGCCAA GGGAGAACCC GGTCCCACTG GTATTCAAGG CCCCCCTGGC
CCCGCTGGGG AAGAAGGAAA GCGAGGAGCC CGAGGTGAAC CTGGACCTGC TGGCCTGCCT
GGACCCCCTG GCGAGCGTGG TGGACCTGGA AGCCGTGGTT TCCCTGGCGC CGACGGTGTT
GCTGGTCCCA AGGGTCCTGC TGGTGAACGC GGTGCTCCTG GCCCTGCTGG CCCCAAAGGT
TCTCCTGGTG AAGCTGGTCG CCCCGGTGAA GCTGGTCTGC CCGGTGCCAA GGGTCTGACT
GGAAGCCCTG GCAGCCCGGG TCCTGATGGC AAAACTGGCC CCCCTGGTCC CGCCGGTCAA
GATGGCCGCC CTGGACCTCC AGGCCCTCCC GGTGCCCGTG GTCAGGCTGG CGTGATGGGT
TTCCCTGGAC CTAAAGGTGC TGCTGGAGAG CCTGGAAAAG CTGGAGAGCG AGGTGTTCCT
GGACCCCCTG GCGCTGTTGG TCCTGCTGGC AAAGACGGAG AAGCTGGAGC TCAGGGACCC
CCAGGACCTG CTGGCCCCGC TGGTGAGAGA GGCGAACAAG GCCCTGCTGG CTCCCCTGGA
TTCCAGGGTC TCCCCGGCCC TGCTGGTCCT CCTGGTGAAG CAGGCAAACC TGGTGAACAG
GGTGTTCCTG GAGATCTTGG TGCCCCCGGC CCCTCTGGAG CAAGAGGCGA GAGAGGTTTC
CCCGGCGAGC GTGGTGTGCA AGGGCCGCCC GGTCCTGCAG GTCCCCGTGG GGCCAATGGT
GCCCCTGGCA ACGATGGTGC TAAGGGTGAT GCTGGTGCCC CTGGAGCCCC CGGTAGCCAG
GGTGCCCCTG GCCTTCAAGG AATGCCTGGT GAACGAGGTG CAGCTGGTCT TCCAGGCCCT
AAGGGTGACA GAGGGGATGC TGGTCCCAAA GGTGCTGATG GTGCTCCTGG CAAAGATGGC
GTCCGTGGTC TGACTGGTCC CATCGGTCCT CCTGGCCCCG CTGGTGCCCC TGGTGACAAG
GGTGAAGCTG GTCCTAGTGG CCCAGCCGGT CCCACTGGAG CTCGTGGTGC CCCCGGTGAC
CGTGGTGAGC CTGGTCCCCC CGGCCCTGCT GGCTTCGCTG GCCCCCCTGG TGCTGATGGC
CAACCTGGTG CTAAAGGCGA ACCTGGTGAT GCTGGTGCTA AAGGTGACGC TGGTCCCCCC
GGCCCTGCTG GGCCCGCTGG ACCCCCCGGC CCCATTGGTA ACGTTGGTGC TCCCGGACCC
AAAGGTGCTC GTGGCAGCGC TGGTCCCCCT GGTGCTACTG GTTTCCCAGG TGCTGCTGGC
CGAGTCGGTC CCCCCGGCCC CTCTGGAAAT GCTGGACCCC CTGGCCCTCC TGGCCCTGCT
GGCAAAGAAG GCAGCAAAGG CCCCCGCGGT GAGACTGGCC CCGCTGGGCG TCCCGGTGAA
GTCGGTCCCC CTGGTCCCCC TGGCCCCGCT GGTGAGAAAG GAGCCCCTGG TGCTGACGGA
CCTGCTGGAG CTCCTGGCAC TCCTGGACCT CAAGGTATTG CTGGACAGCG TGGTGTGGTC
GGCCTGCCTG GTCAGAGAGG AGAAAGAGGC TTCCCTGGTC TTCCTGGCCC CTCTGGTGAA
CCCGGCAAAC AAGGTCCTTC TGGAGCAAGT GGTGAACGTG GCCCCCCTGG TCCCATGGGC
CCCCCTGGAT TGGCTGGACC CCCTGGCGAG TCTGGACGTG AGGGAGCTCC TGGTGCTGAA
GGATCCCCTG GACGAGATGG TTCTCCTGGC GCCAAGGGTG ACCGTGGTGA GACCGGCCCT
GCTGGACCTC CTGGTGCTCC TGGCGCTCCC GGTGCCCCCG GCCCTGTCGG ACCTGCCGGC
AAGAGCGGTG ATCGTGGTGA GACCGGTCCT GCTGGTCCTG CTGGTCCCAT TGGCCCCGTT
GGTGCCCGTG GCCCCGCTGG ACCCCAAGGC CCCCGTGGTG ACAAGGGTGA GACAGGCGAA
CAGGGCGACA GAGGCATTAA GGGTCACCGT GGCTTCTCTG GTCTCCAGGG TCCCCCCGGC
CCTCCCGGCT CTCCTGGTGA GCAAGGTCCT TCCGGAGCCT CTGGTCCTGC TGGTCCCCGC
GGTCCCCCTG GCTCTGCTGG TTCTCCCGGC AAAGATGGAC TCAATGGTCT CCCAGGCCCC
ATCGGTCCCC CTGGGCCTCG AGGTCGCACT GGTGATGCTG GTCCTGCTGG TCCTCCCGGC
CCTCCTGGAC CCCCTGGTCC CCCAGGTCCT CCCAGCGGCG GCTACGACTT GAGCTTCCTG
CCCCAGCCAC CTCAAGAGAA GGCTCACGAT GGTGGCCGCT ACTACCGGGC TGATGATGCC
AATGTGGTCC GTGACCGTGA CCTCGAGGTG GACACCACCC TCAAGAGCCT GAGCCAGCAG
ATCGAGAACA TCCGGAGCCC TGAAGGCAGC CGCAAGAACC CCGCCCGCAC CTGCCGTGAC
CTCAAGATGT GCCACTCTGA CTGGAAGAGC GGAGAATACT GGATTGACCC CAACCAAGGC
TGCAACCTGG ATGCCATTAA GGTCTTCTGC AACATGGAAA CCGGTGAGAC CTGTGTATAC
CCCACTCAGC CCAGCGTGGC CCAGAAGAAC TGGTATATCA GCAAGAACCC CAAGGAAAAG
AGGCACGTCT GGTACGGCGA GAGCATGACC GGCGGATTCC AGTTCGAGTA TGGCGGCCAG
GGGTCCGATC CTGCCGATGT GGCCATCCAG CTGACTTTCC TGCGCCTGAT GTCCACCGAG
GCCTCCCAGA ACATCACCTA CCACTGCAAG AACAGCGTGG CCTACATGGA CCAGCAGACT
GGCAACCTCA AGAAGGCCCT GCTCCTCCAG GGCTCCAACG AGATCGAGAT CCGGGCCGAG
GGCAACAGCC GCTTCACCTA CAGCGTCACC TACGATGGCT GCACGAGTCA CACCGGAGCC
TGGGGCAAGA CAGTGATCGA ATACAAAACC ACCAAGACCT CCCGCTTGCC CATCATCGAT
GTGGCCCCCT TGGACGTTGG CGCCCCAGAC CAGGAATTCG GCTTCGACGT TGGCCCTGCC
TGCTTCCTGTT AA

The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.