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CMTM1 cDNA ORF clone, Homo sapiens (human)

Gene Symbol CMTM1
Entrez Gene ID 113540
Full Name CKLF-like MARVEL transmembrane domain containing 1
Synonyms CKLFH, CKLFH1, CKLFSF1
General protein information
Preferred Names
CKLF-like MARVEL transmembrane domain-containing protein 1
Names
CKLF-like MARVEL transmembrane domain-containing protein 1
chemokine-like factor superfamily 1
chemokine-like factor super family 1
chemokine-like factor-like protein CKLFH1
chemokine-like factor superfamily member 1
Gene Type protein-coding
Organism Homo sapiens (human)
Genome

16

16q21

Summary This gene belongs to the chemokine-like factor gene superfamily, a novel family that is similar to the chemokine and the transmembrane 4 superfamilies of signaling molecules. The protein encoded by this gene may play an important role in testicular development. Alternatively spliced transcript variants encoding different isoforms have been identified. Naturally occurring read-through transcription occurs between this locus and the neighboring locus CKLF (chemokine-like factor).[provided by RefSeq, Feb 2011]. lac of sum
Disorder MIM:

607884


mRNA and Protein(s)

mRNA Protein Name
NM_181296 NP_851813 CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 12
NM_181271 NP_851788 CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 3
NM_052999 NP_443725 CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 13
NM_181268 NP_851785 CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 14
NM_181272 NP_851789 CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 4
NM_181269 NP_851786 CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 1
NM_181283 NP_851800 CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 5
NM_181270 NP_851787 CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 2


Homo sapiens (human) CMTM1 NP_443725.3
Pan troglodytes (chimpanzee) LOC100610567 XP_003315186.1
Macaca mulatta (Rhesus monkey) LOC715757 XP_001083621.2
Canis lupus familiaris (dog) CMTM1 NP_001239274.1
Bos taurus (cattle) LOC525286 XP_005218893.1


GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CMTM1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CMTM1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID RefSeq Accession Definition **Vector *Turnaround time Price Select
OHu30710 NM_181296 Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 16, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $69.30
$99.00
OHu29931 NM_181271 Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 3, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $69.30
$99.00
OHu30589 NM_052999 Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 17, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $139.30
$199.00
OHu31059 NM_181268 Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 18, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $188.30
$269.00
OHu30744 NM_181272 Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 4, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $69.30
$99.00
OHu07549 NM_181269 Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $69.30
$99.00
OHu30867 NM_181283 Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 5, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $69.30
$99.00
OHu07548 NM_181270 Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $69.30
$99.00
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.


CloneID OHu30710
Clone ID Related Accession (Same CDS sequence) NM_181296
Accession Version NM_181296.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 87bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 27-JAN-2014
Organism Homo sapiens (human)
Product CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 12
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DN992496.1 and AY174133.1. On Jun 8, 2007 this sequence version replaced gi:31563423. Transcript Variant: This variant (16) has multiple differences in the coding region, compared to variant 17, one of which results in a translational frameshift in the last coding exon. The encoded isoform (12) is shorter and contains a distinct C-terminus, compared to the protein (isoform 13) encoded by variant 17. ##Evidence-Data-START## Transcript exon combination :: AY174133.1 [ECO:0000332] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GCGGTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_851813.1
CDS124..210
Misc Feature(1)112..114(+)
Exon (1)1..204
Gene:CMTM1
Gene Synonym:
Exon (2)205..493
Gene:CMTM1
Gene Synonym:
Translation

Target ORF information:

RefSeq Version NM_181296
Organism Homo sapiens (human)
Definition Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 16, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_181296

ORF Insert Sequence:

1
61
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GCGGTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu29931
Clone ID Related Accession (Same CDS sequence) NM_181271
Accession Version NM_181271.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 369bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 26-JAN-2014
Organism Homo sapiens (human)
Product CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 3
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DN992496.1 and AY174120.1. On Jun 8, 2007 this sequence version replaced gi:31563395. Transcript Variant: This variant (3) has multiple differences in the coding region but maintains the reading frame, compared to variant 17. The encoded isoform (3) is shorter than the protein (isoform 13) encoded by variant 17. ##Evidence-Data-START## Transcript exon combination :: AY174120.1 [ECO:0000332] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GGCAAGTAGC GGCAGCGTAG ATCTTACCAA CAGTATCATT
ACAGCTGTGT TCCTTTCAGT AGTTGCCATC TTGGCCATGC AAGAAAAGAA AAGAAGGCAT
TTACTCTATG TCGGGGGGTC CCTGTGTCTC ACAGCGGTAA TCGTGTGTTG CATCGATGCG
TTTGTGGTCA CCACGAAGAT GAGGACCAAC TTGAAAAGAT TCCTGGGAGT CGAAGTTGAA
AGGAAGCTTT CCCCCGCCAA GGACGCCTAC CCCGAAACCG GCCCCGACGC CCCGCAGAGG
CCCGCCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_851788.1
CDS124..492
Misc Feature(1)112..114(+)
Exon (1)1..222
Gene:CMTM1
Gene Synonym:
Exon (2)223..321
Gene:CMTM1
Gene Synonym:
Exon (3)322..626
Gene:CMTM1
Gene Synonym:
Translation

Target ORF information:

RefSeq Version NM_181271
Organism Homo sapiens (human)
Definition Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 3, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_181271

ORF Insert Sequence:

1
61
121
181
241
301
361
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GGCAAGTAGC GGCAGCGTAG ATCTTACCAA CAGTATCATT
ACAGCTGTGT TCCTTTCAGT AGTTGCCATC TTGGCCATGC AAGAAAAGAA AAGAAGGCAT
TTACTCTATG TCGGGGGGTC CCTGTGTCTC ACAGCGGTAA TCGTGTGTTG CATCGATGCG
TTTGTGGTCA CCACGAAGAT GAGGACCAAC TTGAAAAGAT TCCTGGGAGT CGAAGTTGAA
AGGAAGCTTT CCCCCGCCAA GGACGCCTAC CCCGAAACCG GCCCCGACGC CCCGCAGAGG
CCCGCCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu30589
Clone ID Related Accession (Same CDS sequence) NM_052999
Accession Version NM_052999.3 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 861bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 15-MAR-2015
Organism Homo sapiens (human)
Product CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 13
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DN992496.1, BC057852.1 and AY174119.1. On Jun 8, 2007 this sequence version replaced gi:31563399. Transcript Variant: This variant (17) encodes the longest isoform (13). ##Evidence-Data-START## Transcript exon combination :: BC057852.1, AF278577.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968968, SAMEA2148093 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: full length.

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GGCAAGTAGC GGCAGCGTAG TGAGTTCTGT ACCCAAGGCA
CAGCGCAACA TCTCAGCGAA GACCGCACCC CGGAAGCACC CCGCAGTCTC AATTCGCAGT
GCGCAGTCCG CAGCCGCCGC ACGTCCCCAA GGCAGTGAGG GCACCGCACC CTCAAGGAAA
GCCACCACAC GCCCACCCCC AAAGCCCACA CTCCCACCCC CCACGCCCTC TGCACACACT
GAATCCAAAC TCTTAAATGA GATGGCGATC AAAGAGCGCG TGGAGGGCCG AGCCAAAGTC
CCGTACAAAT TCAGGGACAG CCTCAAACGT TTCTCCTTCT CGCCCACTGG AATGTTGAAG
ATCCTGAGAC TGAGTCTTAT CTTAGGAGCA TTAGCTTGTT TCATCATCAC CCAAGCCAAT
GAGTCATTTA TAACAATCAC AAGTCTGGAA ATCTGCATTG TCGTTTTTTT TATTCTAATA
TATGTGCTAA CCCTTCACCA CTTGCTGACC TATTTACATT GGCCCTTACT TGATCTTACC
AACAGTATCA TTACAGCTGT GTTCCTTTCA GTAGTTGCCA TCTTGGCCAT GCAAGAAAAG
AAAAGAAGGC ATTTACTCTA TGTCGGGGGG TCCCTGTGTC TCACAGCGGT AATCGTGTGT
TGCATCGATG CGTTTGTGGT CACCACGAAG ATGAGGACCA ACTTGAAAAG ATTCCTGGGA
GTCGAAGTTG AAAGGAAGCT TTCCCCCGCC AAGGACGCCT ACCCCGAAAC CGGCCCCGAC
GCCCCGCAGA GGCCCGCCTG A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_443725.3
CDS68..928
Misc Feature(1)16..16(+)
Misc Feature(2)56..58(+)
Misc Feature(3)458..>691(+)
Misc Feature(4)479..481(+)
Misc Feature(5)356..356(+)
Exon (1)1..499
Gene:CMTM1
Gene Synonym:
Exon (2)500..658
Gene:CMTM1
Gene Synonym:
Exon (3)659..757
Gene:CMTM1
Gene Synonym:
Exon (4)758..1062
Gene:CMTM1
Gene Synonym:
Translation

Target ORF information:

RefSeq Version NM_052999
Organism Homo sapiens (human)
Definition Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 17, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_052999

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GGCAAGTAGC GGCAGCGTAG TGAGTTCTGT ACCCAAGGCA
CAGCGCAACA TCTCAGCGAA GACCGCACCC CGGAAGCACC CCGCAGTCTC AATTCGCAGT
GCGCAGTCCG CAGCCGCCGC ACGTCCCCAA GGCAGTGAGG GCACCGCACC CTCAAGGAAA
GCCACCACAC GCCCACCCCC AAAGCCCACA CTCCCACCCC CCACGCCCTC TGCACACACT
GAATCCAAAC TCTTAAATGA GATGGCGATC AAAGAGCGCG TGGAGGGCCG AGCCAAAGTC
CCGTACAAAT TCAGGGACAG CCTCAAACGT TTCTCCTTCT CGCCCACTGG AATGTTGAAG
ATCCTGAGAC TGAGTCTTAT CTTAGGAGCA TTAGCTTGTT TCATCATCAC CCAAGCCAAT
GAGTCATTTA TAACAATCAC AAGTCTGGAA ATCTGCATTG TCGTTTTTTT TATTCTAATA
TATGTGCTAA CCCTTCACCA CTTGCTGACC TATTTACATT GGCCCTTACT TGATCTTACC
AACAGTATCA TTACAGCTGT GTTCCTTTCA GTAGTTGCCA TCTTGGCCAT GCAAGAAAAG
AAAAGAAGGC ATTTACTCTA TGTCGGGGGG TCCCTGTGTC TCACAGCGGT AATCGTGTGT
TGCATCGATG CGTTTGTGGT CACCACGAAG ATGAGGACCA ACTTGAAAAG ATTCCTGGGA
GTCGAAGTTG AAAGGAAGCT TTCCCCCGCC AAGGACGCCT ACCCCGAAAC CGGCCCCGAC
GCCCCGCAGA GGCCCGCCTG A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu31059
Clone ID Related Accession (Same CDS sequence) NM_181268
Accession Version NM_181268.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 696bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 15-MAR-2015
Organism Homo sapiens (human)
Product CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 14
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DN992496.1, BC057852.1 and AY174119.1. On Jun 8, 2007 this sequence version replaced gi:31563389. Transcript Variant: This variant (18) lacks an exon segment, compared to variant 17, which results in a translational frameshift in the last coding exon. The encoded isoform (14) is shorter and contains a distinct C-terminus, compared to the protein (isoform 13) encoded by variant 17. ##Evidence-Data-START## Transcript exon combination :: AF278576.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968968, SAMEA2148093 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: full length.

1
61
121
181
241
301
361
421
481
541
601
661
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GGCAAGTAGC GGCAGCGTAG TGAGTTCTGT ACCCAAGGCA
CAGCGCAACA TCTCAGCGAA GACCGCACCC CGGAAGCACC CCGCAGTCTC AATTCGCAGT
GCGCAGTCCG CAGCCGCCGC ACGTCCCCAA GGCAGTGAGG GCACCGCACC CTCAAGGAAA
GCCACCACAC GCCCACCCCC AAAGCCCACA CTCCCACCCC CCACGCCCTC TGCACACACT
GAATCCAAAC TCTTAAATGA GATGGCGATC AAAGAGCGCG TGGAGGGCCG AGCCAAAGTC
CCGTACAAAT TCAGGGACAG CCTCAAACGT TTCTCCTTCT CGCCCACTGG AATGTTGAAG
ATCCTGAGAC TGAGTCTTAT CTTAGGAGCA TTAGCTTGTT TCATCATCAC CCAAGCCAAT
GAGTCATTTA TAACAATCAC AAGTCTGGAA ATCTGCATTG TCGTTTTTTT TATTCTAATA
TATGTGCTAA CCCTTCACCA CTTGCTGACC TATTTACATT GGCCCTTACT TGATCTTACC
AACAGTATCA TTACAGCTGT GTTCCTTTCA GTAGTTGCCA TCTTGGCCAT GCAAGAAAAG
AAAAGAAGGC ATTTACTCTA TGTCGGGGGG CGGTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_851785.2
CDS68..763
Misc Feature(1)16..16(+)
Misc Feature(2)56..58(+)
Misc Feature(3)458..>691(+)
Misc Feature(4)479..481(+)
Misc Feature(5)356..356(+)
Exon (1)1..499
Gene:CMTM1
Gene Synonym:
Exon (2)500..658
Gene:CMTM1
Gene Synonym:
Exon (3)659..757
Gene:CMTM1
Gene Synonym:
Exon (4)758..1046
Gene:CMTM1
Gene Synonym:
Translation

Target ORF information:

RefSeq Version NM_181268
Organism Homo sapiens (human)
Definition Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 18, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_181268

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GGCAAGTAGC GGCAGCGTAG TGAGTTCTGT ACCCAAGGCA
CAGCGCAACA TCTCAGCGAA GACCGCACCC CGGAAGCACC CCGCAGTCTC AATTCGCAGT
GCGCAGTCCG CAGCCGCCGC ACGTCCCCAA GGCAGTGAGG GCACCGCACC CTCAAGGAAA
GCCACCACAC GCCCACCCCC AAAGCCCACA CTCCCACCCC CCACGCCCTC TGCACACACT
GAATCCAAAC TCTTAAATGA GATGGCGATC AAAGAGCGCG TGGAGGGCCG AGCCAAAGTC
CCGTACAAAT TCAGGGACAG CCTCAAACGT TTCTCCTTCT CGCCCACTGG AATGTTGAAG
ATCCTGAGAC TGAGTCTTAT CTTAGGAGCA TTAGCTTGTT TCATCATCAC CCAAGCCAAT
GAGTCATTTA TAACAATCAC AAGTCTGGAA ATCTGCATTG TCGTTTTTTT TATTCTAATA
TATGTGCTAA CCCTTCACCA CTTGCTGACC TATTTACATT GGCCCTTACT TGATCTTACC
AACAGTATCA TTACAGCTGT GTTCCTTTCA GTAGTTGCCA TCTTGGCCAT GCAAGAAAAG
AAAAGAAGGC ATTTACTCTA TGTCGGGGGG CGGTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu30744
Clone ID Related Accession (Same CDS sequence) NM_181272
Accession Version NM_181272.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 351bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 15-MAR-2015
Organism Homo sapiens (human)
Product CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 4
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DN992496.1 and AY174121.1. On Jun 8, 2007 this sequence version replaced gi:31563397. Transcript Variant: This variant (4) has multiple differences in the 5' coding region, compared to variant 17. The encoded isoform (4) is shorter than the protein (isoform 13) encoded by variant 17. ##Evidence-Data-START## Transcript exon combination :: AY174121.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2148874, SAMEA2151119 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GGATCTTACC AACAGTATCA TTACAGCTGT GTTCCTTTCA
GTAGTTGCCA TCTTGGCCAT GCAAGAAAAG AAAAGAAGGC ATTTACTCTA TGTCGGGGGG
TCCCTGTGTC TCACAGCGGT AATCGTGTGT TGCATCGATG CGTTTGTGGT CACCACGAAG
ATGAGGACCA ACTTGAAAAG ATTCCTGGGA GTCGAAGTTG AAAGGAAGCT TTCCCCCGCC
AAGGACGCCT ACCCCGAAAC CGGCCCCGAC GCCCCGCAGA GGCCCGCCTG A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_851789.1
CDS124..474
Misc Feature(1)112..114(+)
Exon (1)1..204
Gene:CMTM1
Gene Synonym:
Exon (2)205..303
Gene:CMTM1
Gene Synonym:
Exon (3)304..608
Gene:CMTM1
Gene Synonym:
Translation

Target ORF information:

RefSeq Version NM_181272
Organism Homo sapiens (human)
Definition Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 4, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_181272

ORF Insert Sequence:

1
61
121
181
241
301
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GGATCTTACC AACAGTATCA TTACAGCTGT GTTCCTTTCA
GTAGTTGCCA TCTTGGCCAT GCAAGAAAAG AAAAGAAGGC ATTTACTCTA TGTCGGGGGG
TCCCTGTGTC TCACAGCGGT AATCGTGTGT TGCATCGATG CGTTTGTGGT CACCACGAAG
ATGAGGACCA ACTTGAAAAG ATTCCTGGGA GTCGAAGTTG AAAGGAAGCT TTCCCCCGCC
AAGGACGCCT ACCCCGAAAC CGGCCCCGAC GCCCCGCAGA GGCCCGCCTG A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu07549
Clone ID Related Accession (Same CDS sequence) NM_181269
Accession Version NM_181269.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 510bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 15-MAR-2015
Organism Homo sapiens (human)
Product CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 1
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DN992496.1 and AY174118.1. On Jun 8, 2007 this sequence version replaced gi:31563391. Transcript Variant: This variant (1) lacks an alternate in-frame segment of the first coding exon, compared to variant 17. The encoded isoform (1) is shorter than the protein (isoform 13) encoded by variant 17. ##Evidence-Data-START## Transcript exon combination :: AY174118.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968968, SAMEA2148093 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
421
481
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GAGTCTTATC TTAGGAGCAT TAGCTTGTTT CATCATCACC
CAAGCCAATG AGTCATTTAT AACAATCACA AGTCTGGAAA TCTGCATTGT CGTTTTTTTT
ATTCTAATAT ATGTGCTAAC CCTTCACCAC TTGCTGACCT ATTTACATTG GCCCTTACTT
GATCTTACCA ACAGTATCAT TACAGCTGTG TTCCTTTCAG TAGTTGCCAT CTTGGCCATG
CAAGAAAAGA AAAGAAGGCA TTTACTCTAT GTCGGGGGGT CCCTGTGTCT CACAGCGGTA
ATCGTGTGTT GCATCGATGC GTTTGTGGTC ACCACGAAGA TGAGGACCAA CTTGAAAAGA
TTCCTGGGAG TCGAAGTTGA AAGGAAGCTT TCCCCCGCCA AGGACGCCTA CCCCGAAACC
GGCCCCGACG CCCCGCAGAG GCCCGCCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_851786.1
CDS124..633
Misc Feature(1)112..114(+)
Misc Feature(2)187..249(+)
Misc Feature(3)259..321(+)
Misc Feature(4)358..420(+)
Misc Feature(5)451..513(+)
Exon (1)1..204
Gene:CMTM1
Gene Synonym:
Exon (2)205..363
Gene:CMTM1
Gene Synonym:
Exon (3)364..462
Gene:CMTM1
Gene Synonym:
Exon (4)463..767
Gene:CMTM1
Gene Synonym:
Translation

Target ORF information:

RefSeq Version NM_181269
Organism Homo sapiens (human)
Definition Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_181269

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GAGTCTTATC TTAGGAGCAT TAGCTTGTTT CATCATCACC
CAAGCCAATG AGTCATTTAT AACAATCACA AGTCTGGAAA TCTGCATTGT CGTTTTTTTT
ATTCTAATAT ATGTGCTAAC CCTTCACCAC TTGCTGACCT ATTTACATTG GCCCTTACTT
GATCTTACCA ACAGTATCAT TACAGCTGTG TTCCTTTCAG TAGTTGCCAT CTTGGCCATG
CAAGAAAAGA AAAGAAGGCA TTTACTCTAT GTCGGGGGGT CCCTGTGTCT CACAGCGGTA
ATCGTGTGTT GCATCGATGC GTTTGTGGTC ACCACGAAGA TGAGGACCAA CTTGAAAAGA
TTCCTGGGAG TCGAAGTTGA AAGGAAGCTT TCCCCCGCCA AGGACGCCTA CCCCGAAACC
GGCCCCGACG CCCCGCAGAG GCCCGCCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu30867
Clone ID Related Accession (Same CDS sequence) NM_181283
Accession Version NM_181283.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 186bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 15-MAR-2015
Organism Homo sapiens (human)
Product CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 5
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DN992496.1 and AY174122.1. On Jun 8, 2007 this sequence version replaced gi:31563401. Transcript Variant: This variant (5) has multiple differences in the coding region, compared to variant 17, one of which results in a translational frameshift in the last coding exon. The encoded isoform (5) is shorter and contains a distinct C-terminus, compared to the protein (isoform 13) encoded by variant 17. ##Evidence-Data-START## Transcript exon combination :: AY174122.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2148874, SAMEA2151119 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GGATCTTACC AACAGTATCA TTACAGCTGT GTTCCTTTCA
GTAGTTGCCA TCTTGGCCAT GCAAGAAAAG AAAAGAAGGC ATTTACTCTA TGTCGGGGGG
CGGTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_851800.1
CDS124..309
Misc Feature(1)112..114(+)
Exon (1)1..204
Gene:CMTM1
Gene Synonym:
Exon (2)205..303
Gene:CMTM1
Gene Synonym:
Exon (3)304..592
Gene:CMTM1
Gene Synonym:
Translation

Target ORF information:

RefSeq Version NM_181283
Organism Homo sapiens (human)
Definition Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 5, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_181283

ORF Insert Sequence:

1
61
121
181
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GGATCTTACC AACAGTATCA TTACAGCTGT GTTCCTTTCA
GTAGTTGCCA TCTTGGCCAT GCAAGAAAAG AAAAGAAGGC ATTTACTCTA TGTCGGGGGG
CGGTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu07548
Clone ID Related Accession (Same CDS sequence) NM_181270
Accession Version NM_181270.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 345bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 15-MAR-2015
Organism Homo sapiens (human)
Product CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 2
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DN992496.1 and AY174119.1. On Jun 8, 2007 this sequence version replaced gi:31563393. Transcript Variant: This variant (2) has multiple differences in the coding region, compared to variant 17, one of which results in a translational frameshift in the last coding exon. The encoded isoform (2) is shorter and contains a distinct C-terminus, compared to the protein (isoform 13) encoded by variant 17. ##Evidence-Data-START## Transcript exon combination :: AY174119.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968968, SAMEA2148093 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GAGTCTTATC TTAGGAGCAT TAGCTTGTTT CATCATCACC
CAAGCCAATG AGTCATTTAT AACAATCACA AGTCTGGAAA TCTGCATTGT CGTTTTTTTT
ATTCTAATAT ATGTGCTAAC CCTTCACCAC TTGCTGACCT ATTTACATTG GCCCTTACTT
GATCTTACCA ACAGTATCAT TACAGCTGTG TTCCTTTCAG TAGTTGCCAT CTTGGCCATG
CAAGAAAAGA AAAGAAGGCA TTTACTCTAT GTCGGGGGGC GGTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_851787.1
CDS124..468
Misc Feature(1)112..114(+)
Misc Feature(2)187..249(+)
Misc Feature(3)259..321(+)
Misc Feature(4)358..420(+)
Exon (1)1..204
Gene:CMTM1
Gene Synonym:
Exon (2)205..363
Gene:CMTM1
Gene Synonym:
Exon (3)364..462
Gene:CMTM1
Gene Synonym:
Exon (4)463..751
Gene:CMTM1
Gene Synonym:
Translation

Target ORF information:

RefSeq Version NM_181270
Organism Homo sapiens (human)
Definition Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_181270

ORF Insert Sequence:

1
61
121
181
241
301
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GAGTCTTATC TTAGGAGCAT TAGCTTGTTT CATCATCACC
CAAGCCAATG AGTCATTTAT AACAATCACA AGTCTGGAAA TCTGCATTGT CGTTTTTTTT
ATTCTAATAT ATGTGCTAAC CCTTCACCAC TTGCTGACCT ATTTACATTG GCCCTTACTT
GATCTTACCA ACAGTATCAT TACAGCTGTG TTCCTTTCAG TAGTTGCCAT CTTGGCCATG
CAAGAAAAGA AAAGAAGGCA TTTACTCTAT GTCGGGGGGC GGTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

book

New genetic associations detected in a host response study to hepatitis B vaccine
Genes Immun. 11 (3), 232-238 (2010)
Davila S, Froeling FE, Tan A, Bonnard C, Boland GJ, Snippe H, Hibberd ML and Seielstad M.


book

A functional promoter region of the CKLFSF2 gene is located in the last intron/exon region of the upstream CKLFSF1 gene
Int. J. Biochem. Cell Biol. 37 (6), 1296-1307 (2005)
Xu M, Yang S, Gao Y, Shi S and Ma D.


book

Molecular cloning and characterization of chemokine-like factor super family member 1 (CKLFSF1), a novel human gene with at least 23 alternative splicing isoforms in testis tissue
Int. J. Biochem. Cell Biol. 36 (8), 1492-1501 (2004)
Wang L, Wu C, Zheng Y, Qiu X, Wang L, Fan H, Han W, Lv B, Wang Y, Zhu X, Xu M, Ding P, Cheng S, Zhang Y, Song Q and Ma D.


book

Identification of eight genes encoding chemokine-like factor superfamily members 1-8 (CKLFSF1-8) by in silico cloning and experimental validation
Genomics 81 (6), 609-617 (2003)
Han W, Ding P, Xu M, Wang L, Rui M, Shi S, Liu Y, Zheng Y, Chen Y, Yang T and Ma D.


 
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