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CMTM1 CKLF-like MARVEL transmembrane domain containing 1 [Homo sapiens (human)]

Gene Symbol CMTM1
Entrez Gene ID 113540
Full Name CKLF-like MARVEL transmembrane domain containing 1
Synonyms CKLFH, CKLFH1, CKLFSF1
General protein information
Preferred Names
CKLF-like MARVEL transmembrane domain-containing protein 1
Names
CKLF-like MARVEL transmembrane domain-containing protein 1
chemokine-like factor superfamily 1
chemokine-like factor super family 1
chemokine-like factor-like protein CKLFH1
chemokine-like factor superfamily member 1
Gene Type protein-coding
Organism Homo sapiens (human)
Genome

16

16q21

Summary This gene belongs to the chemokine-like factor gene superfamily, a novel family that is similar to the chemokine and the transmembrane 4 superfamilies of signaling molecules. The protein encoded by this gene may play an important role in testicular development. Alternatively spliced transcript variants encoding different isoforms have been identified. Naturally occurring read-through transcription occurs between this locus and the neighboring locus CKLF (chemokine-like factor).[provided by RefSeq, Feb 2011]. lac of sum
Disorder MIM:

607884

Disorder Html:
CloneID RefSeq Accession Definition **Vector *Turnaround time Price
OHu30710 NM_181296 Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 16, mRNA. pcDNA3.1-C-(k)DYK Not in stock 7-9 Starting from $99.00
OHu29931 NM_181271 Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 3, mRNA. pcDNA3.1-C-(k)DYK Not in stock 7-9 Starting from $99.00
OHu30589 NM_052999 Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 17, mRNA. pcDNA3.1-C-(k)DYK Not in stock 7-9 Starting from $99.00
OHu31059 NM_181268 Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 18, mRNA. pcDNA3.1-C-(k)DYK Not in stock 7-9 Starting from $99.00
OHu30744 NM_181272 Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 4, mRNA. pcDNA3.1-C-(k)DYK Not in stock 7-9 Starting from $99.00
OHu07549 NM_181269 Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 1, mRNA. pcDNA3.1-C-(k)DYK Not in stock 7-9 Starting from $99.00
OHu30867 NM_181283 Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 5, mRNA. pcDNA3.1-C-(k)DYK Not in stock 7-9 Starting from $99.00
OHu07548 NM_181270 Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 2, mRNA. pcDNA3.1-C-(k)DYK Not in stock 7-9 Starting from $99.00

*Business Day
**You may select a custom vector to replace pcDNA3.1-C-(k)DYK after clone is added to cart.



CloneID OHu30710D
Sequence Information ORF Nucleotide Sequence (Length: 87bp)
Protein sequence
SNP
Vector pcDNA3.1-C-(k)DYK or customized vector
Clone information Clone Map
Tag on pcDNA3.1-C-(k)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 27-JAN-2014
Organism Homo sapiens (human)
Product CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 12
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DN992496.1 and AY174133.1. On Jun 8, 2007 this sequence version replaced gi:31563423. Summary: This gene belongs to the chemokine-like factor gene superfamily, a novel family that is similar to the chemokine and the transmembrane 4 superfamilies of signaling molecules. The protein encoded by this gene may play an important role in testicular development. Alternatively spliced transcript variants encoding different isoforms have been identified. Naturally occurring read-through transcription occurs between this locus and the neighboring locus CKLF (chemokine-like factor).[provided by RefSeq, Feb 2011]. Transcript Variant: This variant (16) has multiple differences in the coding region, compared to variant 17, one of which results in a translational frameshift in the last coding exon. The encoded isoform (12) is shorter and contains a distinct C-terminus, compared to the protein (isoform 13) encoded by variant 17. ##Evidence-Data-START## Transcript exon combination :: AY174133.1 [ECO:0000332] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GCGGTAA
The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.
RefSeqNP_851813.1
CDS124..210
Misc Feature(1)112..114(+)
Exon (1)1..204
Gene:CMTM1
Gene Synonym:
Exon (2)205..493
Gene:CMTM1
Gene Synonym:
Translation
Position Chain Variation Link
2 2 a, g dbSNP:7188654
14 14 c, t dbSNP:558298189
34 34 a, g dbSNP:572021560
41 41 -, g dbSNP:767266082
48 48 c, t dbSNP:540495607
61 61 c, t dbSNP:560416587
73 73 c, g dbSNP:376626299
74 74 c, t dbSNP:745968002
77 77 a, c dbSNP:780586407
81 81 c, t dbSNP:780378389
82 82 a, c, g dbSNP:747871843
84 84 a, c, t dbSNP:375996235
86 86 c, g dbSNP:771005209
87 87 a, g dbSNP:200484856
88 88 a, g dbSNP:185418981
94 94 a, g dbSNP:201681581
102 102 c, g dbSNP:377278322
110 110 c, t dbSNP:762625577
111 111 c, t dbSNP:764394648
119 119 a, c dbSNP:370693367
120 120 c, g dbSNP:757698734
132 132 g, t dbSNP:565102464
136 136 a, c, t dbSNP:750453605
148 148 a, g dbSNP:756263404
150 150 a, g dbSNP:780103056
151 151 a, t dbSNP:16956746
161 161 c, t dbSNP:755271934
165 165 c, t dbSNP:755724973
171 171 a, g dbSNP:746802219
181 181 c, g dbSNP:139697674
184 184 -, c dbSNP:777675871
186 186 a, g dbSNP:7193473
189 189 -, t dbSNP:34395956
196 196 a, g dbSNP:776680806
205 205 c, t dbSNP:762146712
206 206 a, g, t dbSNP:377254479
209 209 a, g dbSNP:750911977
213 213 -, gt dbSNP:757151291
214 214 c, t dbSNP:761297270
225 225 g, t dbSNP:369806715
228 228 -, cgtt dbSNP:765161750
228 228 a, g dbSNP:753980725
232 232 c, t dbSNP:759766066
237 237 g, t dbSNP:765435625
253 253 g, t dbSNP:751345556
254 254 a, g dbSNP:757041782
272 272 a, c dbSNP:562250091
279 279 a, g dbSNP:750309054
281 281 c, t dbSNP:756055758
282 282 a, g dbSNP:779468403
284 284 a, g dbSNP:748859453
290 290 a, g dbSNP:754650033
291 291 a, g dbSNP:116013244
292 292 a, g dbSNP:79874663
293 293 a, g dbSNP:772287541
298 298 c, t dbSNP:773737131
299 299 a, t dbSNP:747462304
302 302 c, g dbSNP:147435182
306 306 a, g dbSNP:776846320
312 312 a, g dbSNP:759583939
314 314 c, t dbSNP:765466789
316 316 c, t dbSNP:539321506
321 321 c, g dbSNP:377380210
329 329 c, t dbSNP:139633590
332 332 -, c dbSNP:750219578
336 336 a, g dbSNP:369544223
340 340 c, t dbSNP:200464133
344 344 a, g dbSNP:756037366
345 345 a, c dbSNP:766357483
347 347 a, g dbSNP:753328843
357 357 g, t dbSNP:754489747
366 366 c, g dbSNP:778519016
368 368 c, t dbSNP:747708637
369 369 c, g dbSNP:758084539
371 371 c, t dbSNP:778218654
373 373 c, t dbSNP:749588255
375 375 -, t dbSNP:755308539
375 375 c, t dbSNP:747445697
387 387 c, t dbSNP:771542475
396 396 a, c dbSNP:777316599
404 404 c, t dbSNP:374449700
411 411 a, g, t dbSNP:769712526
474 474 -, gct dbSNP:750046089
489 489 a, g dbSNP:552852679

Target ORF information:

RefSeq Version NM_181296
Organism Homo sapiens (human)
Definition Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 16, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1-C-(k)DYK
NM_181296

ORF Insert Sequence:

1
61
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GCGGTAA

The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.


CloneID OHu29931D
Sequence Information ORF Nucleotide Sequence (Length: 369bp)
Protein sequence
SNP
Vector pcDNA3.1-C-(k)DYK or customized vector
Clone information Clone Map
Tag on pcDNA3.1-C-(k)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 26-JAN-2014
Organism Homo sapiens (human)
Product CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 3
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DN992496.1 and AY174120.1. On Jun 8, 2007 this sequence version replaced gi:31563395. Summary: This gene belongs to the chemokine-like factor gene superfamily, a novel family that is similar to the chemokine and the transmembrane 4 superfamilies of signaling molecules. The protein encoded by this gene may play an important role in testicular development. Alternatively spliced transcript variants encoding different isoforms have been identified. Naturally occurring read-through transcription occurs between this locus and the neighboring locus CKLF (chemokine-like factor).[provided by RefSeq, Feb 2011]. Transcript Variant: This variant (3) has multiple differences in the coding region but maintains the reading frame, compared to variant 17. The encoded isoform (3) is shorter than the protein (isoform 13) encoded by variant 17. ##Evidence-Data-START## Transcript exon combination :: AY174120.1 [ECO:0000332] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GGCAAGTAGC GGCAGCGTAG ATCTTACCAA CAGTATCATT
ACAGCTGTGT TCCTTTCAGT AGTTGCCATC TTGGCCATGC AAGAAAAGAA AAGAAGGCAT
TTACTCTATG TCGGGGGGTC CCTGTGTCTC ACAGCGGTAA TCGTGTGTTG CATCGATGCG
TTTGTGGTCA CCACGAAGAT GAGGACCAAC TTGAAAAGAT TCCTGGGAGT CGAAGTTGAA
AGGAAGCTTT CCCCCGCCAA GGACGCCTAC CCCGAAACCG GCCCCGACGC CCCGCAGAGG
CCCGCCTGA
The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.
RefSeqNP_851788.1
CDS124..492
Misc Feature(1)112..114(+)
Exon (1)1..222
Gene:CMTM1
Gene Synonym:
Exon (2)223..321
Gene:CMTM1
Gene Synonym:
Exon (3)322..626
Gene:CMTM1
Gene Synonym:
Translation
Position Chain Variation Link
2 2 a, g dbSNP:7188654
14 14 c, t dbSNP:558298189
34 34 a, g dbSNP:572021560
41 41 -, g dbSNP:767266082
48 48 c, t dbSNP:540495607
61 61 c, t dbSNP:560416587
73 73 c, g dbSNP:376626299
74 74 c, t dbSNP:745968002
77 77 a, c dbSNP:780586407
81 81 c, t dbSNP:780378389
82 82 a, c, g dbSNP:747871843
84 84 a, c, t dbSNP:375996235
86 86 c, g dbSNP:771005209
87 87 a, g dbSNP:200484856
88 88 a, g dbSNP:185418981
94 94 a, g dbSNP:201681581
102 102 c, g dbSNP:377278322
110 110 c, t dbSNP:762625577
111 111 c, t dbSNP:764394648
119 119 a, c dbSNP:370693367
120 120 c, g dbSNP:757698734
132 132 g, t dbSNP:565102464
136 136 a, c, t dbSNP:750453605
148 148 a, g dbSNP:756263404
150 150 a, g dbSNP:780103056
151 151 a, t dbSNP:16956746
161 161 c, t dbSNP:755271934
165 165 c, t dbSNP:755724973
171 171 a, g dbSNP:746802219
181 181 c, g dbSNP:139697674
184 184 -, c dbSNP:777675871
186 186 a, g dbSNP:7193473
189 189 -, t dbSNP:34395956
196 196 a, g dbSNP:776680806
205 205 g, t dbSNP:150962863
209 209 a, g dbSNP:140665645
210 210 g, t dbSNP:774885624
216 216 c, t dbSNP:150085831
218 218 a, g dbSNP:763744387
234 234 c, g dbSNP:369019205
240 240 a, c, t dbSNP:373007977
253 253 c, t dbSNP:746914928
255 255 c, t dbSNP:770787117
275 275 c, t dbSNP:780748501
281 281 c, t dbSNP:745428783
287 287 a, g dbSNP:769414970
299 299 -, g dbSNP:767147053
299 299 g, t dbSNP:775164738
309 309 c, g dbSNP:202207367
310 310 a, t dbSNP:762627623
311 311 a, g dbSNP:147603897
313 313 -, t dbSNP:775136572
314 314 a, t dbSNP:774595421
315 315 -, cg, g dbSNP:764106629
315 315 c, t dbSNP:140837467
316 316 a, g dbSNP:762317754
316 316 -, g dbSNP:760037737
318 318 a, g dbSNP:528073342
319 319 c, g dbSNP:767972506
320 320 a, g dbSNP:750507160
321 321 a, g dbSNP:141489184
322 322 a, t dbSNP:745348980
323 323 a, c dbSNP:769251440
326 326 c, t dbSNP:779560021
330 330 a, t dbSNP:748877941
331 331 c, g dbSNP:150823211
335 335 c, t dbSNP:774768645
338 338 c, t dbSNP:762146712
339 339 a, g, t dbSNP:377254479
342 342 a, g dbSNP:750911977
346 346 -, gt dbSNP:757151291
347 347 c, t dbSNP:761297270
358 358 g, t dbSNP:369806715
361 361 -, cgtt dbSNP:765161750
361 361 a, g dbSNP:753980725
365 365 c, t dbSNP:759766066
370 370 g, t dbSNP:765435625
386 386 g, t dbSNP:751345556
387 387 a, g dbSNP:757041782
405 405 a, c dbSNP:562250091
412 412 a, g dbSNP:750309054
414 414 c, t dbSNP:756055758
415 415 a, g dbSNP:779468403
417 417 a, g dbSNP:748859453
423 423 a, g dbSNP:754650033
424 424 a, g dbSNP:116013244
425 425 a, g dbSNP:79874663
426 426 a, g dbSNP:772287541
431 431 c, t dbSNP:773737131
432 432 a, t dbSNP:747462304
435 435 c, g dbSNP:147435182
439 439 a, g dbSNP:776846320
445 445 a, g dbSNP:759583939
447 447 c, t dbSNP:765466789
449 449 c, t dbSNP:539321506
454 454 c, g dbSNP:377380210
462 462 c, t dbSNP:139633590
465 465 -, c dbSNP:750219578
469 469 a, g dbSNP:369544223
473 473 c, t dbSNP:200464133
477 477 a, g dbSNP:756037366
478 478 a, c dbSNP:766357483
480 480 a, g dbSNP:753328843
490 490 g, t dbSNP:754489747
499 499 c, g dbSNP:778519016
501 501 c, t dbSNP:747708637
502 502 c, g dbSNP:758084539
504 504 c, t dbSNP:778218654
506 506 c, t dbSNP:749588255
508 508 -, t dbSNP:755308539
508 508 c, t dbSNP:747445697
520 520 c, t dbSNP:771542475
529 529 a, c dbSNP:777316599
537 537 c, t dbSNP:374449700
544 544 a, g, t dbSNP:769712526
607 607 -, gct dbSNP:750046089
622 622 a, g dbSNP:552852679

Target ORF information:

RefSeq Version NM_181271
Organism Homo sapiens (human)
Definition Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 3, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1-C-(k)DYK
NM_181271

ORF Insert Sequence:

1
61
121
181
241
301
361
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GGCAAGTAGC GGCAGCGTAG ATCTTACCAA CAGTATCATT
ACAGCTGTGT TCCTTTCAGT AGTTGCCATC TTGGCCATGC AAGAAAAGAA AAGAAGGCAT
TTACTCTATG TCGGGGGGTC CCTGTGTCTC ACAGCGGTAA TCGTGTGTTG CATCGATGCG
TTTGTGGTCA CCACGAAGAT GAGGACCAAC TTGAAAAGAT TCCTGGGAGT CGAAGTTGAA
AGGAAGCTTT CCCCCGCCAA GGACGCCTAC CCCGAAACCG GCCCCGACGC CCCGCAGAGG
CCCGCCTGA

The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.


CloneID OHu30589D
Sequence Information ORF Nucleotide Sequence (Length: 861bp)
Protein sequence
SNP
Vector pcDNA3.1-C-(k)DYK or customized vector
Clone information Clone Map
Tag on pcDNA3.1-C-(k)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 15-MAR-2015
Organism Homo sapiens (human)
Product CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 13
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DN992496.1, BC057852.1 and AY174119.1. On Jun 8, 2007 this sequence version replaced gi:31563399. Summary: This gene belongs to the chemokine-like factor gene superfamily, a novel family that is similar to the chemokine and the transmembrane 4 superfamilies of signaling molecules. The protein encoded by this gene may play an important role in testicular development. Alternatively spliced transcript variants encoding different isoforms have been identified. Naturally occurring read-through transcription occurs between this locus and the neighboring locus CKLF (chemokine-like factor).[provided by RefSeq, Feb 2011]. Transcript Variant: This variant (17) encodes the longest isoform (13). ##Evidence-Data-START## Transcript exon combination :: BC057852.1, AF278577.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968968, SAMEA2148093 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: full length.

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GGCAAGTAGC GGCAGCGTAG TGAGTTCTGT ACCCAAGGCA
CAGCGCAACA TCTCAGCGAA GACCGCACCC CGGAAGCACC CCGCAGTCTC AATTCGCAGT
GCGCAGTCCG CAGCCGCCGC ACGTCCCCAA GGCAGTGAGG GCACCGCACC CTCAAGGAAA
GCCACCACAC GCCCACCCCC AAAGCCCACA CTCCCACCCC CCACGCCCTC TGCACACACT
GAATCCAAAC TCTTAAATGA GATGGCGATC AAAGAGCGCG TGGAGGGCCG AGCCAAAGTC
CCGTACAAAT TCAGGGACAG CCTCAAACGT TTCTCCTTCT CGCCCACTGG AATGTTGAAG
ATCCTGAGAC TGAGTCTTAT CTTAGGAGCA TTAGCTTGTT TCATCATCAC CCAAGCCAAT
GAGTCATTTA TAACAATCAC AAGTCTGGAA ATCTGCATTG TCGTTTTTTT TATTCTAATA
TATGTGCTAA CCCTTCACCA CTTGCTGACC TATTTACATT GGCCCTTACT TGATCTTACC
AACAGTATCA TTACAGCTGT GTTCCTTTCA GTAGTTGCCA TCTTGGCCAT GCAAGAAAAG
AAAAGAAGGC ATTTACTCTA TGTCGGGGGG TCCCTGTGTC TCACAGCGGT AATCGTGTGT
TGCATCGATG CGTTTGTGGT CACCACGAAG ATGAGGACCA ACTTGAAAAG ATTCCTGGGA
GTCGAAGTTG AAAGGAAGCT TTCCCCCGCC AAGGACGCCT ACCCCGAAAC CGGCCCCGAC
GCCCCGCAGA GGCCCGCCTTG A
The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.
RefSeqNP_443725.3
CDS68..928
Misc Feature(1)16..16(+)
Misc Feature(2)56..58(+)
Misc Feature(3)458..>691(+)
Misc Feature(4)479..481(+)
Misc Feature(5)356..356(+)
Exon (1)1..499
Gene:CMTM1
Gene Synonym:
Exon (2)500..658
Gene:CMTM1
Gene Synonym:
Exon (3)659..757
Gene:CMTM1
Gene Synonym:
Exon (4)758..1062
Gene:CMTM1
Gene Synonym:
Translation
Position Chain Variation Link
5 5 c, t dbSNP:560416587
17 17 c, g dbSNP:376626299
18 18 c, t dbSNP:745968002
21 21 a, c dbSNP:780586407
25 25 c, t dbSNP:780378389
26 26 a, c, g dbSNP:747871843
28 28 a, c, t dbSNP:375996235
30 30 c, g dbSNP:771005209
31 31 a, g dbSNP:200484856
32 32 a, g dbSNP:185418981
38 38 a, g dbSNP:201681581
46 46 c, g dbSNP:377278322
54 54 c, t dbSNP:762625577
55 55 c, t dbSNP:764394648
63 63 a, c dbSNP:370693367
64 64 c, g dbSNP:757698734
76 76 g, t dbSNP:565102464
80 80 a, c, t dbSNP:750453605
92 92 a, g dbSNP:756263404
94 94 a, g dbSNP:780103056
95 95 a, t dbSNP:16956746
105 105 c, t dbSNP:755271934
109 109 c, t dbSNP:755724973
115 115 a, g dbSNP:746802219
125 125 c, g dbSNP:139697674
128 128 -, c dbSNP:777675871
130 130 a, g dbSNP:7193473
133 133 -, t dbSNP:34395956
140 140 a, g dbSNP:776680806
149 149 g, t dbSNP:150962863
153 153 a, g dbSNP:140665645
154 154 g, t dbSNP:774885624
160 160 c, t dbSNP:150085831
162 162 a, g dbSNP:763744387
167 167 -, gt dbSNP:749027523
172 172 c, t dbSNP:774696436
174 174 c, t dbSNP:762226154
191 191 c, t dbSNP:375960305
196 196 c, t dbSNP:750976523
197 197 a, t dbSNP:756606914
204 204 c, t dbSNP:199952606
207 207 a, c dbSNP:567575920
212 212 a, g dbSNP:755182042
216 216 c, g dbSNP:370268819
219 219 a, g dbSNP:746785842
221 221 a, c dbSNP:369514026
224 224 c, g dbSNP:780880626
229 229 -, cg dbSNP:772404836
230 230 a, g dbSNP:376463543
235 235 c, g dbSNP:374155136
238 238 a, t dbSNP:368668653
241 241 -, cgcagtg dbSNP:747100496
242 242 c, t dbSNP:774917241
244 244 a, c, g dbSNP:748865619
246 246 a, c, g dbSNP:201161463
249 249 c, t dbSNP:200222581
256 256 c, t dbSNP:368367708
265 265 c, t dbSNP:761185593
267 267 a, c dbSNP:766799791
268 268 a, c dbSNP:569712351
272 272 c, g dbSNP:759747563
273 273 c, g dbSNP:765526090
274 274 c, t dbSNP:372320948
275 275 c, t dbSNP:376961375
279 279 a, c, g dbSNP:367966569
281 281 -, agtg dbSNP:777307953
286 286 c, g dbSNP:756076779
287 287 a, g dbSNP:780028729
293 293 a, g dbSNP:371441957
309 309 c, t dbSNP:533051435
310 310 c, t dbSNP:766648884
317 317 c, t dbSNP:369937977
324 324 c, g, t dbSNP:199641934
325 325 c, g, t dbSNP:747785103
326 326 c, t dbSNP:773558250
327 327 c, g dbSNP:761010246
329 329 a, g dbSNP:375789919
337 337 a, t dbSNP:777326414
338 338 c, t dbSNP:760152037
346 346 a, c dbSNP:765359849
347 347 c, g dbSNP:376539260
348 348 c, t dbSNP:201013566
349 349 c, g dbSNP:763169929
350 350 a, g dbSNP:369671479
352 352 a, g dbSNP:750222024
355 355 c, t dbSNP:755915699
358 358 c, t dbSNP:779938973
362 362 c, t dbSNP:753731102
366 366 c, t dbSNP:754929271
373 373 a, c dbSNP:778333805
376 376 -, ct dbSNP:763218044
379 379 -, c dbSNP:766021565
386 386 a, g dbSNP:76570334
391 391 a, g dbSNP:747614992
393 393 c, t dbSNP:771748780
397 397 c, g dbSNP:201906936
402 402 a, g dbSNP:202212160
405 405 a, g dbSNP:771383161
408 408 -, g dbSNP:759067318
408 408 a, t dbSNP:777158769
414 414 a, g dbSNP:145485908
415 415 c, t dbSNP:770430575
416 416 c, t dbSNP:140706635
417 417 a, g dbSNP:775637796
419 419 a, g dbSNP:565492845
420 420 c, t dbSNP:764358984
421 421 c, t dbSNP:774480319
430 430 a, c, g dbSNP:145913875
431 431 c, g, t dbSNP:753642081
432 432 a, g dbSNP:138390040
443 443 a, g dbSNP:752236513
444 444 a, g dbSNP:534326950
446 446 a, g dbSNP:554032547
453 453 a, g dbSNP:376013371
462 462 c, g dbSNP:746594943
463 463 a, c dbSNP:142981518
465 465 c, t dbSNP:376558643
467 467 c, t dbSNP:574039075
477 477 a, g dbSNP:770414362
478 478 a, g dbSNP:199958360
479 479 a, t dbSNP:200596324
480 480 c, t dbSNP:768581974
482 482 c, t dbSNP:774508829
498 498 g, t dbSNP:200116339
502 502 -, tctta dbSNP:748162727
515 515 g, t dbSNP:373908730
517 517 a, g dbSNP:749962292
521 521 a, c, g dbSNP:572608128
522 522 c, g dbSNP:766119406
533 533 a, g dbSNP:754136044
535 535 c, t dbSNP:755417525
542 542 a, g dbSNP:367806211
546 546 a, g dbSNP:753161061
547 547 c, t dbSNP:758927415
562 562 a, c dbSNP:143266143
579 579 c, t dbSNP:747160036
589 589 c, t dbSNP:771046877
590 590 -, tttttt dbSNP:773521289
590 590 a, g, t dbSNP:781528376
591 591 g, t dbSNP:768460744
597 597 c, t dbSNP:774313744
598 598 a, t dbSNP:748044817
599 599 a, t dbSNP:772135461
602 602 c, t dbSNP:772840980
604 604 a, t dbSNP:760288124
605 605 a, c, t dbSNP:765924026
608 608 c, t dbSNP:759142039
613 613 a, g dbSNP:765536805
628 628 c, g dbSNP:753064838
634 634 a, g dbSNP:574920092
634 634 -, g dbSNP:749674617
639 639 a, g dbSNP:537027985
657 657 g, t dbSNP:751571188
670 670 c, g dbSNP:369019205
676 676 a, c, t dbSNP:373007977
689 689 c, t dbSNP:746914928
691 691 c, t dbSNP:770787117
711 711 c, t dbSNP:780748501
717 717 c, t dbSNP:745428783
723 723 a, g dbSNP:769414970
735 735 -, g dbSNP:767147053
735 735 g, t dbSNP:775164738
745 745 c, g dbSNP:202207367
746 746 a, t dbSNP:762627623
747 747 a, g dbSNP:147603897
749 749 -, t dbSNP:775136572
750 750 a, t dbSNP:774595421
751 751 -, cg, g dbSNP:764106629
751 751 c, t dbSNP:140837467
752 752 a, g dbSNP:762317754
752 752 -, g dbSNP:760037737
754 754 a, g dbSNP:528073342
755 755 c, g dbSNP:767972506
756 756 a, g dbSNP:750507160
757 757 a, g dbSNP:141489184
758 758 a, t dbSNP:745348980
759 759 a, c dbSNP:769251440
762 762 c, t dbSNP:779560021
766 766 a, t dbSNP:748877941
767 767 c, g dbSNP:150823211
771 771 c, t dbSNP:774768645
774 774 c, t dbSNP:762146712
775 775 a, g, t dbSNP:377254479
778 778 a, g dbSNP:750911977
782 782 -, gt dbSNP:757151291
783 783 c, t dbSNP:761297270
794 794 g, t dbSNP:369806715
797 797 -, cgtt dbSNP:765161750
797 797 a, g dbSNP:753980725
801 801 c, t dbSNP:759766066
806 806 g, t dbSNP:765435625
822 822 g, t dbSNP:751345556
823 823 a, g dbSNP:757041782
841 841 a, c dbSNP:562250091
848 848 a, g dbSNP:750309054
850 850 c, t dbSNP:756055758
851 851 a, g dbSNP:779468403
853 853 a, g dbSNP:748859453
859 859 a, g dbSNP:754650033
860 860 a, g dbSNP:116013244
861 861 a, g dbSNP:79874663
862 862 a, g dbSNP:772287541
867 867 c, t dbSNP:773737131
868 868 a, t dbSNP:747462304
871 871 c, g dbSNP:147435182
875 875 a, g dbSNP:776846320
881 881 a, g dbSNP:759583939
883 883 c, t dbSNP:765466789
885 885 c, t dbSNP:539321506
890 890 c, g dbSNP:377380210
898 898 c, t dbSNP:139633590
901 901 -, c dbSNP:750219578
905 905 a, g dbSNP:369544223
909 909 c, t dbSNP:200464133
913 913 a, g dbSNP:756037366
914 914 a, c dbSNP:766357483
916 916 a, g dbSNP:753328843
926 926 g, t dbSNP:754489747
935 935 c, g dbSNP:778519016
937 937 c, t dbSNP:747708637
938 938 c, g dbSNP:758084539
940 940 c, t dbSNP:778218654
942 942 c, t dbSNP:749588255
944 944 -, t dbSNP:755308539
944 944 c, t dbSNP:747445697
956 956 c, t dbSNP:771542475
965 965 a, c dbSNP:777316599
973 973 c, t dbSNP:374449700
980 980 a, g, t dbSNP:769712526
1043 1043 -, gct dbSNP:750046089
1058 1058 a, g dbSNP:552852679

Target ORF information:

RefSeq Version NM_052999
Organism Homo sapiens (human)
Definition Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 17, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1-C-(k)DYK
NM_052999

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GGCAAGTAGC GGCAGCGTAG TGAGTTCTGT ACCCAAGGCA
CAGCGCAACA TCTCAGCGAA GACCGCACCC CGGAAGCACC CCGCAGTCTC AATTCGCAGT
GCGCAGTCCG CAGCCGCCGC ACGTCCCCAA GGCAGTGAGG GCACCGCACC CTCAAGGAAA
GCCACCACAC GCCCACCCCC AAAGCCCACA CTCCCACCCC CCACGCCCTC TGCACACACT
GAATCCAAAC TCTTAAATGA GATGGCGATC AAAGAGCGCG TGGAGGGCCG AGCCAAAGTC
CCGTACAAAT TCAGGGACAG CCTCAAACGT TTCTCCTTCT CGCCCACTGG AATGTTGAAG
ATCCTGAGAC TGAGTCTTAT CTTAGGAGCA TTAGCTTGTT TCATCATCAC CCAAGCCAAT
GAGTCATTTA TAACAATCAC AAGTCTGGAA ATCTGCATTG TCGTTTTTTT TATTCTAATA
TATGTGCTAA CCCTTCACCA CTTGCTGACC TATTTACATT GGCCCTTACT TGATCTTACC
AACAGTATCA TTACAGCTGT GTTCCTTTCA GTAGTTGCCA TCTTGGCCAT GCAAGAAAAG
AAAAGAAGGC ATTTACTCTA TGTCGGGGGG TCCCTGTGTC TCACAGCGGT AATCGTGTGT
TGCATCGATG CGTTTGTGGT CACCACGAAG ATGAGGACCA ACTTGAAAAG ATTCCTGGGA
GTCGAAGTTG AAAGGAAGCT TTCCCCCGCC AAGGACGCCT ACCCCGAAAC CGGCCCCGAC
GCCCCGCAGA GGCCCGCCTTG A

The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.


CloneID OHu31059D
Sequence Information ORF Nucleotide Sequence (Length: 696bp)
Protein sequence
SNP
Vector pcDNA3.1-C-(k)DYK or customized vector
Clone information Clone Map
Tag on pcDNA3.1-C-(k)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 15-MAR-2015
Organism Homo sapiens (human)
Product CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 14
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DN992496.1, BC057852.1 and AY174119.1. On Jun 8, 2007 this sequence version replaced gi:31563389. Summary: This gene belongs to the chemokine-like factor gene superfamily, a novel family that is similar to the chemokine and the transmembrane 4 superfamilies of signaling molecules. The protein encoded by this gene may play an important role in testicular development. Alternatively spliced transcript variants encoding different isoforms have been identified. Naturally occurring read-through transcription occurs between this locus and the neighboring locus CKLF (chemokine-like factor).[provided by RefSeq, Feb 2011]. Transcript Variant: This variant (18) lacks an exon segment, compared to variant 17, which results in a translational frameshift in the last coding exon. The encoded isoform (14) is shorter and contains a distinct C-terminus, compared to the protein (isoform 13) encoded by variant 17. ##Evidence-Data-START## Transcript exon combination :: AF278576.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968968, SAMEA2148093 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: full length.

1
61
121
181
241
301
361
421
481
541
601
661
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GGCAAGTAGC GGCAGCGTAG TGAGTTCTGT ACCCAAGGCA
CAGCGCAACA TCTCAGCGAA GACCGCACCC CGGAAGCACC CCGCAGTCTC AATTCGCAGT
GCGCAGTCCG CAGCCGCCGC ACGTCCCCAA GGCAGTGAGG GCACCGCACC CTCAAGGAAA
GCCACCACAC GCCCACCCCC AAAGCCCACA CTCCCACCCC CCACGCCCTC TGCACACACT
GAATCCAAAC TCTTAAATGA GATGGCGATC AAAGAGCGCG TGGAGGGCCG AGCCAAAGTC
CCGTACAAAT TCAGGGACAG CCTCAAACGT TTCTCCTTCT CGCCCACTGG AATGTTGAAG
ATCCTGAGAC TGAGTCTTAT CTTAGGAGCA TTAGCTTGTT TCATCATCAC CCAAGCCAAT
GAGTCATTTA TAACAATCAC AAGTCTGGAA ATCTGCATTG TCGTTTTTTT TATTCTAATA
TATGTGCTAA CCCTTCACCA CTTGCTGACC TATTTACATT GGCCCTTACT TGATCTTACC
AACAGTATCA TTACAGCTGT GTTCCTTTCA GTAGTTGCCA TCTTGGCCAT GCAAGAAAAG
AAAAGAAGGC ATTTACTCTA TGTCGGGGGG CGGTAA
The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.
RefSeqNP_851785.2
CDS68..763
Misc Feature(1)16..16(+)
Misc Feature(2)56..58(+)
Misc Feature(3)458..>691(+)
Misc Feature(4)479..481(+)
Misc Feature(5)356..356(+)
Exon (1)1..499
Gene:CMTM1
Gene Synonym:
Exon (2)500..658
Gene:CMTM1
Gene Synonym:
Exon (3)659..757
Gene:CMTM1
Gene Synonym:
Exon (4)758..1046
Gene:CMTM1
Gene Synonym:
Translation
Position Chain Variation Link
5 5 c, t dbSNP:560416587
17 17 c, g dbSNP:376626299
18 18 c, t dbSNP:745968002
21 21 a, c dbSNP:780586407
25 25 c, t dbSNP:780378389
26 26 a, c, g dbSNP:747871843
28 28 a, c, t dbSNP:375996235
30 30 c, g dbSNP:771005209
31 31 a, g dbSNP:200484856
32 32 a, g dbSNP:185418981
38 38 a, g dbSNP:201681581
46 46 c, g dbSNP:377278322
54 54 c, t dbSNP:762625577
55 55 c, t dbSNP:764394648
63 63 a, c dbSNP:370693367
64 64 c, g dbSNP:757698734
76 76 g, t dbSNP:565102464
80 80 a, c, t dbSNP:750453605
92 92 a, g dbSNP:756263404
94 94 a, g dbSNP:780103056
95 95 a, t dbSNP:16956746
105 105 c, t dbSNP:755271934
109 109 c, t dbSNP:755724973
115 115 a, g dbSNP:746802219
125 125 c, g dbSNP:139697674
128 128 -, c dbSNP:777675871
130 130 a, g dbSNP:7193473
133 133 -, t dbSNP:34395956
140 140 a, g dbSNP:776680806
149 149 g, t dbSNP:150962863
153 153 a, g dbSNP:140665645
154 154 g, t dbSNP:774885624
160 160 c, t dbSNP:150085831
162 162 a, g dbSNP:763744387
167 167 -, gt dbSNP:749027523
172 172 c, t dbSNP:774696436
174 174 c, t dbSNP:762226154
191 191 c, t dbSNP:375960305
196 196 c, t dbSNP:750976523
197 197 a, t dbSNP:756606914
204 204 c, t dbSNP:199952606
207 207 a, c dbSNP:567575920
212 212 a, g dbSNP:755182042
216 216 c, g dbSNP:370268819
219 219 a, g dbSNP:746785842
221 221 a, c dbSNP:369514026
224 224 c, g dbSNP:780880626
229 229 -, cg dbSNP:772404836
230 230 a, g dbSNP:376463543
235 235 c, g dbSNP:374155136
238 238 a, t dbSNP:368668653
241 241 -, cgcagtg dbSNP:747100496
242 242 c, t dbSNP:774917241
244 244 a, c, g dbSNP:748865619
246 246 a, c, g dbSNP:201161463
249 249 c, t dbSNP:200222581
256 256 c, t dbSNP:368367708
265 265 c, t dbSNP:761185593
267 267 a, c dbSNP:766799791
268 268 a, c dbSNP:569712351
272 272 c, g dbSNP:759747563
273 273 c, g dbSNP:765526090
274 274 c, t dbSNP:372320948
275 275 c, t dbSNP:376961375
279 279 a, c, g dbSNP:367966569
281 281 -, agtg dbSNP:777307953
286 286 c, g dbSNP:756076779
287 287 a, g dbSNP:780028729
293 293 a, g dbSNP:371441957
309 309 c, t dbSNP:533051435
310 310 c, t dbSNP:766648884
317 317 c, t dbSNP:369937977
324 324 c, g, t dbSNP:199641934
325 325 c, g, t dbSNP:747785103
326 326 c, t dbSNP:773558250
327 327 c, g dbSNP:761010246
329 329 a, g dbSNP:375789919
337 337 a, t dbSNP:777326414
338 338 c, t dbSNP:760152037
346 346 a, c dbSNP:765359849
347 347 c, g dbSNP:376539260
348 348 c, t dbSNP:201013566
349 349 c, g dbSNP:763169929
350 350 a, g dbSNP:369671479
352 352 a, g dbSNP:750222024
355 355 c, t dbSNP:755915699
358 358 c, t dbSNP:779938973
362 362 c, t dbSNP:753731102
366 366 c, t dbSNP:754929271
373 373 a, c dbSNP:778333805
376 376 -, ct dbSNP:763218044
379 379 -, c dbSNP:766021565
386 386 a, g dbSNP:76570334
391 391 a, g dbSNP:747614992
393 393 c, t dbSNP:771748780
397 397 c, g dbSNP:201906936
402 402 a, g dbSNP:202212160
405 405 a, g dbSNP:771383161
408 408 -, g dbSNP:759067318
408 408 a, t dbSNP:777158769
414 414 a, g dbSNP:145485908
415 415 c, t dbSNP:770430575
416 416 c, t dbSNP:140706635
417 417 a, g dbSNP:775637796
419 419 a, g dbSNP:565492845
420 420 c, t dbSNP:764358984
421 421 c, t dbSNP:774480319
430 430 a, c, g dbSNP:145913875
431 431 c, g, t dbSNP:753642081
432 432 a, g dbSNP:138390040
443 443 a, g dbSNP:752236513
444 444 a, g dbSNP:534326950
446 446 a, g dbSNP:554032547
453 453 a, g dbSNP:376013371
462 462 c, g dbSNP:746594943
463 463 a, c dbSNP:142981518
465 465 c, t dbSNP:376558643
467 467 c, t dbSNP:574039075
477 477 a, g dbSNP:770414362
478 478 a, g dbSNP:199958360
479 479 a, t dbSNP:200596324
480 480 c, t dbSNP:768581974
482 482 c, t dbSNP:774508829
498 498 g, t dbSNP:200116339
502 502 -, tctta dbSNP:748162727
515 515 g, t dbSNP:373908730
517 517 a, g dbSNP:749962292
521 521 a, c, g dbSNP:572608128
522 522 c, g dbSNP:766119406
533 533 a, g dbSNP:754136044
535 535 c, t dbSNP:755417525
542 542 a, g dbSNP:367806211
546 546 a, g dbSNP:753161061
547 547 c, t dbSNP:758927415
562 562 a, c dbSNP:143266143
579 579 c, t dbSNP:747160036
589 589 c, t dbSNP:771046877
590 590 -, tttttt dbSNP:773521289
590 590 a, g, t dbSNP:781528376
591 591 g, t dbSNP:768460744
597 597 c, t dbSNP:774313744
598 598 a, t dbSNP:748044817
599 599 a, t dbSNP:772135461
602 602 c, t dbSNP:772840980
604 604 a, t dbSNP:760288124
605 605 a, c, t dbSNP:765924026
608 608 c, t dbSNP:759142039
613 613 a, g dbSNP:765536805
628 628 c, g dbSNP:753064838
634 634 a, g dbSNP:574920092
634 634 -, g dbSNP:749674617
639 639 a, g dbSNP:537027985
657 657 g, t dbSNP:751571188
670 670 c, g dbSNP:369019205
676 676 a, c, t dbSNP:373007977
689 689 c, t dbSNP:746914928
691 691 c, t dbSNP:770787117
711 711 c, t dbSNP:780748501
717 717 c, t dbSNP:745428783
723 723 a, g dbSNP:769414970
735 735 -, g dbSNP:767147053
735 735 g, t dbSNP:775164738
745 745 c, g dbSNP:202207367
746 746 a, t dbSNP:762627623
747 747 a, g dbSNP:147603897
749 749 -, t dbSNP:775136572
750 750 a, t dbSNP:774595421
751 751 -, cg, g dbSNP:764106629
751 751 c, t dbSNP:140837467
752 752 a, g dbSNP:762317754
752 752 -, g dbSNP:760037737
754 754 a, g dbSNP:528073342
755 755 c, g dbSNP:767972506
756 756 a, g dbSNP:750507160
757 757 a, g dbSNP:141489184
758 758 c, t dbSNP:762146712
759 759 a, g, t dbSNP:377254479
762 762 a, g dbSNP:750911977
766 766 -, gt dbSNP:757151291
767 767 c, t dbSNP:761297270
778 778 g, t dbSNP:369806715
781 781 -, cgtt dbSNP:765161750
781 781 a, g dbSNP:753980725
785 785 c, t dbSNP:759766066
790 790 g, t dbSNP:765435625
806 806 g, t dbSNP:751345556
807 807 a, g dbSNP:757041782
825 825 a, c dbSNP:562250091
832 832 a, g dbSNP:750309054
834 834 c, t dbSNP:756055758
835 835 a, g dbSNP:779468403
837 837 a, g dbSNP:748859453
843 843 a, g dbSNP:754650033
844 844 a, g dbSNP:116013244
845 845 a, g dbSNP:79874663
846 846 a, g dbSNP:772287541
851 851 c, t dbSNP:773737131
852 852 a, t dbSNP:747462304
855 855 c, g dbSNP:147435182
859 859 a, g dbSNP:776846320
865 865 a, g dbSNP:759583939
867 867 c, t dbSNP:765466789
869 869 c, t dbSNP:539321506
874 874 c, g dbSNP:377380210
882 882 c, t dbSNP:139633590
885 885 -, c dbSNP:750219578
889 889 a, g dbSNP:369544223
893 893 c, t dbSNP:200464133
897 897 a, g dbSNP:756037366
898 898 a, c dbSNP:766357483
900 900 a, g dbSNP:753328843
910 910 g, t dbSNP:754489747
919 919 c, g dbSNP:778519016
921 921 c, t dbSNP:747708637
922 922 c, g dbSNP:758084539
924 924 c, t dbSNP:778218654
926 926 c, t dbSNP:749588255
928 928 -, t dbSNP:755308539
928 928 c, t dbSNP:747445697
940 940 c, t dbSNP:771542475
949 949 a, c dbSNP:777316599
957 957 c, t dbSNP:374449700
964 964 a, g, t dbSNP:769712526
1027 1027 -, gct dbSNP:750046089
1042 1042 a, g dbSNP:552852679

Target ORF information:

RefSeq Version NM_181268
Organism Homo sapiens (human)
Definition Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 18, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1-C-(k)DYK
NM_181268

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GGCAAGTAGC GGCAGCGTAG TGAGTTCTGT ACCCAAGGCA
CAGCGCAACA TCTCAGCGAA GACCGCACCC CGGAAGCACC CCGCAGTCTC AATTCGCAGT
GCGCAGTCCG CAGCCGCCGC ACGTCCCCAA GGCAGTGAGG GCACCGCACC CTCAAGGAAA
GCCACCACAC GCCCACCCCC AAAGCCCACA CTCCCACCCC CCACGCCCTC TGCACACACT
GAATCCAAAC TCTTAAATGA GATGGCGATC AAAGAGCGCG TGGAGGGCCG AGCCAAAGTC
CCGTACAAAT TCAGGGACAG CCTCAAACGT TTCTCCTTCT CGCCCACTGG AATGTTGAAG
ATCCTGAGAC TGAGTCTTAT CTTAGGAGCA TTAGCTTGTT TCATCATCAC CCAAGCCAAT
GAGTCATTTA TAACAATCAC AAGTCTGGAA ATCTGCATTG TCGTTTTTTT TATTCTAATA
TATGTGCTAA CCCTTCACCA CTTGCTGACC TATTTACATT GGCCCTTACT TGATCTTACC
AACAGTATCA TTACAGCTGT GTTCCTTTCA GTAGTTGCCA TCTTGGCCAT GCAAGAAAAG
AAAAGAAGGC ATTTACTCTA TGTCGGGGGG CGGTAA

The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.


CloneID OHu30744D
Sequence Information ORF Nucleotide Sequence (Length: 351bp)
Protein sequence
SNP
Vector pcDNA3.1-C-(k)DYK or customized vector
Clone information Clone Map
Tag on pcDNA3.1-C-(k)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 15-MAR-2015
Organism Homo sapiens (human)
Product CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 4
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DN992496.1 and AY174121.1. On Jun 8, 2007 this sequence version replaced gi:31563397. Summary: This gene belongs to the chemokine-like factor gene superfamily, a novel family that is similar to the chemokine and the transmembrane 4 superfamilies of signaling molecules. The protein encoded by this gene may play an important role in testicular development. Alternatively spliced transcript variants encoding different isoforms have been identified. Naturally occurring read-through transcription occurs between this locus and the neighboring locus CKLF (chemokine-like factor).[provided by RefSeq, Feb 2011]. Transcript Variant: This variant (4) has multiple differences in the 5' coding region, compared to variant 17. The encoded isoform (4) is shorter than the protein (isoform 13) encoded by variant 17. ##Evidence-Data-START## Transcript exon combination :: AY174121.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2148874, SAMEA2151119 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GGATCTTACC AACAGTATCA TTACAGCTGT GTTCCTTTCA
GTAGTTGCCA TCTTGGCCAT GCAAGAAAAG AAAAGAAGGC ATTTACTCTA TGTCGGGGGG
TCCCTGTGTC TCACAGCGGT AATCGTGTGT TGCATCGATG CGTTTGTGGT CACCACGAAG
ATGAGGACCA ACTTGAAAAG ATTCCTGGGA GTCGAAGTTG AAAGGAAGCT TTCCCCCGCC
AAGGACGCCT ACCCCGAAAC CGGCCCCGAC GCCCCGCAGA GGCCCGCCTTG A
The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.
RefSeqNP_851789.1
CDS124..474
Misc Feature(1)112..114(+)
Exon (1)1..204
Gene:CMTM1
Gene Synonym:
Exon (2)205..303
Gene:CMTM1
Gene Synonym:
Exon (3)304..608
Gene:CMTM1
Gene Synonym:
Translation
Position Chain Variation Link
2 2 a, g dbSNP:7188654
14 14 c, t dbSNP:558298189
34 34 a, g dbSNP:572021560
41 41 -, g dbSNP:767266082
48 48 c, t dbSNP:540495607
61 61 c, t dbSNP:560416587
73 73 c, g dbSNP:376626299
74 74 c, t dbSNP:745968002
77 77 a, c dbSNP:780586407
81 81 c, t dbSNP:780378389
82 82 a, c, g dbSNP:747871843
84 84 a, c, t dbSNP:375996235
86 86 c, g dbSNP:771005209
87 87 a, g dbSNP:200484856
88 88 a, g dbSNP:185418981
94 94 a, g dbSNP:201681581
102 102 c, g dbSNP:377278322
110 110 c, t dbSNP:762625577
111 111 c, t dbSNP:764394648
119 119 a, c dbSNP:370693367
120 120 c, g dbSNP:757698734
132 132 g, t dbSNP:565102464
136 136 a, c, t dbSNP:750453605
148 148 a, g dbSNP:756263404
150 150 a, g dbSNP:780103056
151 151 a, t dbSNP:16956746
161 161 c, t dbSNP:755271934
165 165 c, t dbSNP:755724973
171 171 a, g dbSNP:746802219
181 181 c, g dbSNP:139697674
184 184 -, c dbSNP:777675871
186 186 a, g dbSNP:7193473
189 189 -, t dbSNP:34395956
196 196 a, g dbSNP:776680806
216 216 c, g dbSNP:369019205
222 222 a, c, t dbSNP:373007977
235 235 c, t dbSNP:746914928
237 237 c, t dbSNP:770787117
257 257 c, t dbSNP:780748501
263 263 c, t dbSNP:745428783
269 269 a, g dbSNP:769414970
281 281 -, g dbSNP:767147053
281 281 g, t dbSNP:775164738
291 291 c, g dbSNP:202207367
292 292 a, t dbSNP:762627623
293 293 a, g dbSNP:147603897
295 295 -, t dbSNP:775136572
296 296 a, t dbSNP:774595421
297 297 -, cg, g dbSNP:764106629
297 297 c, t dbSNP:140837467
298 298 a, g dbSNP:762317754
298 298 -, g dbSNP:760037737
300 300 a, g dbSNP:528073342
301 301 c, g dbSNP:767972506
302 302 a, g dbSNP:750507160
303 303 a, g dbSNP:141489184
304 304 a, t dbSNP:745348980
305 305 a, c dbSNP:769251440
308 308 c, t dbSNP:779560021
312 312 a, t dbSNP:748877941
313 313 c, g dbSNP:150823211
317 317 c, t dbSNP:774768645
320 320 c, t dbSNP:762146712
321 321 a, g, t dbSNP:377254479
324 324 a, g dbSNP:750911977
328 328 -, gt dbSNP:757151291
329 329 c, t dbSNP:761297270
340 340 g, t dbSNP:369806715
343 343 -, cgtt dbSNP:765161750
343 343 a, g dbSNP:753980725
347 347 c, t dbSNP:759766066
352 352 g, t dbSNP:765435625
368 368 g, t dbSNP:751345556
369 369 a, g dbSNP:757041782
387 387 a, c dbSNP:562250091
394 394 a, g dbSNP:750309054
396 396 c, t dbSNP:756055758
397 397 a, g dbSNP:779468403
399 399 a, g dbSNP:748859453
405 405 a, g dbSNP:754650033
406 406 a, g dbSNP:116013244
407 407 a, g dbSNP:79874663
408 408 a, g dbSNP:772287541
413 413 c, t dbSNP:773737131
414 414 a, t dbSNP:747462304
417 417 c, g dbSNP:147435182
421 421 a, g dbSNP:776846320
427 427 a, g dbSNP:759583939
429 429 c, t dbSNP:765466789
431 431 c, t dbSNP:539321506
436 436 c, g dbSNP:377380210
444 444 c, t dbSNP:139633590
447 447 -, c dbSNP:750219578
451 451 a, g dbSNP:369544223
455 455 c, t dbSNP:200464133
459 459 a, g dbSNP:756037366
460 460 a, c dbSNP:766357483
462 462 a, g dbSNP:753328843
472 472 g, t dbSNP:754489747
481 481 c, g dbSNP:778519016
483 483 c, t dbSNP:747708637
484 484 c, g dbSNP:758084539
486 486 c, t dbSNP:778218654
488 488 c, t dbSNP:749588255
490 490 -, t dbSNP:755308539
490 490 c, t dbSNP:747445697
502 502 c, t dbSNP:771542475
511 511 a, c dbSNP:777316599
519 519 c, t dbSNP:374449700
526 526 a, g, t dbSNP:769712526
589 589 -, gct dbSNP:750046089
604 604 a, g dbSNP:552852679

Target ORF information:

RefSeq Version NM_181272
Organism Homo sapiens (human)
Definition Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 4, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1-C-(k)DYK
NM_181272

ORF Insert Sequence:

1
61
121
181
241
301
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GGATCTTACC AACAGTATCA TTACAGCTGT GTTCCTTTCA
GTAGTTGCCA TCTTGGCCAT GCAAGAAAAG AAAAGAAGGC ATTTACTCTA TGTCGGGGGG
TCCCTGTGTC TCACAGCGGT AATCGTGTGT TGCATCGATG CGTTTGTGGT CACCACGAAG
ATGAGGACCA ACTTGAAAAG ATTCCTGGGA GTCGAAGTTG AAAGGAAGCT TTCCCCCGCC
AAGGACGCCT ACCCCGAAAC CGGCCCCGAC GCCCCGCAGA GGCCCGCCTTG A

The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.


CloneID OHu07549D
Sequence Information ORF Nucleotide Sequence (Length: 510bp)
Protein sequence
SNP
Vector pcDNA3.1-C-(k)DYK or customized vector
Clone information Clone Map
Tag on pcDNA3.1-C-(k)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 15-MAR-2015
Organism Homo sapiens (human)
Product CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 1
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DN992496.1 and AY174118.1. On Jun 8, 2007 this sequence version replaced gi:31563391. Summary: This gene belongs to the chemokine-like factor gene superfamily, a novel family that is similar to the chemokine and the transmembrane 4 superfamilies of signaling molecules. The protein encoded by this gene may play an important role in testicular development. Alternatively spliced transcript variants encoding different isoforms have been identified. Naturally occurring read-through transcription occurs between this locus and the neighboring locus CKLF (chemokine-like factor).[provided by RefSeq, Feb 2011]. Transcript Variant: This variant (1) lacks an alternate in-frame segment of the first coding exon, compared to variant 17. The encoded isoform (1) is shorter than the protein (isoform 13) encoded by variant 17. ##Evidence-Data-START## Transcript exon combination :: AY174118.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968968, SAMEA2148093 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
421
481
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GAGTCTTATC TTAGGAGCAT TAGCTTGTTT CATCATCACC
CAAGCCAATG AGTCATTTAT AACAATCACA AGTCTGGAAA TCTGCATTGT CGTTTTTTTT
ATTCTAATAT ATGTGCTAAC CCTTCACCAC TTGCTGACCT ATTTACATTG GCCCTTACTT
GATCTTACCA ACAGTATCAT TACAGCTGTG TTCCTTTCAG TAGTTGCCAT CTTGGCCATG
CAAGAAAAGA AAAGAAGGCA TTTACTCTAT GTCGGGGGGT CCCTGTGTCT CACAGCGGTA
ATCGTGTGTT GCATCGATGC GTTTGTGGTC ACCACGAAGA TGAGGACCAA CTTGAAAAGA
TTCCTGGGAG TCGAAGTTGA AAGGAAGCTT TCCCCCGCCA AGGACGCCTA CCCCGAAACC
GGCCCCGACG CCCCGCAGAG GCCCGCCTGA
The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.
RefSeqNP_851786.1
CDS124..633
Misc Feature(1)112..114(+)
Misc Feature(2)187..249(+)
Misc Feature(3)259..321(+)
Misc Feature(4)358..420(+)
Misc Feature(5)451..513(+)
Exon (1)1..204
Gene:CMTM1
Gene Synonym:
Exon (2)205..363
Gene:CMTM1
Gene Synonym:
Exon (3)364..462
Gene:CMTM1
Gene Synonym:
Exon (4)463..767
Gene:CMTM1
Gene Synonym:
Translation
Position Chain Variation Link
2 2 a, g dbSNP:7188654
14 14 c, t dbSNP:558298189
34 34 a, g dbSNP:572021560
41 41 -, g dbSNP:767266082
48 48 c, t dbSNP:540495607
61 61 c, t dbSNP:560416587
73 73 c, g dbSNP:376626299
74 74 c, t dbSNP:745968002
77 77 a, c dbSNP:780586407
81 81 c, t dbSNP:780378389
82 82 a, c, g dbSNP:747871843
84 84 a, c, t dbSNP:375996235
86 86 c, g dbSNP:771005209
87 87 a, g dbSNP:200484856
88 88 a, g dbSNP:185418981
94 94 a, g dbSNP:201681581
102 102 c, g dbSNP:377278322
110 110 c, t dbSNP:762625577
111 111 c, t dbSNP:764394648
119 119 a, c dbSNP:370693367
120 120 c, g dbSNP:757698734
132 132 g, t dbSNP:565102464
136 136 a, c, t dbSNP:750453605
148 148 a, g dbSNP:756263404
150 150 a, g dbSNP:780103056
151 151 a, t dbSNP:16956746
161 161 c, t dbSNP:755271934
165 165 c, t dbSNP:755724973
171 171 a, g dbSNP:746802219
181 181 c, g dbSNP:139697674
184 184 -, c dbSNP:777675871
186 186 a, g dbSNP:7193473
189 189 -, t dbSNP:34395956
196 196 a, g dbSNP:776680806
207 207 -, tctta dbSNP:748162727
220 220 g, t dbSNP:373908730
222 222 a, g dbSNP:749962292
226 226 a, c, g dbSNP:572608128
227 227 c, g dbSNP:766119406
238 238 a, g dbSNP:754136044
240 240 c, t dbSNP:755417525
247 247 a, g dbSNP:367806211
251 251 a, g dbSNP:753161061
252 252 c, t dbSNP:758927415
267 267 a, c dbSNP:143266143
284 284 c, t dbSNP:747160036
294 294 c, t dbSNP:771046877
295 295 -, tttttt dbSNP:773521289
295 295 a, g, t dbSNP:781528376
296 296 g, t dbSNP:768460744
302 302 c, t dbSNP:774313744
303 303 a, t dbSNP:748044817
304 304 a, t dbSNP:772135461
307 307 c, t dbSNP:772840980
309 309 a, t dbSNP:760288124
310 310 a, c, t dbSNP:765924026
313 313 c, t dbSNP:759142039
318 318 a, g dbSNP:765536805
333 333 c, g dbSNP:753064838
339 339 a, g dbSNP:574920092
339 339 -, g dbSNP:749674617
344 344 a, g dbSNP:537027985
362 362 g, t dbSNP:751571188
375 375 c, g dbSNP:369019205
381 381 a, c, t dbSNP:373007977
394 394 c, t dbSNP:746914928
396 396 c, t dbSNP:770787117
416 416 c, t dbSNP:780748501
422 422 c, t dbSNP:745428783
428 428 a, g dbSNP:769414970
440 440 -, g dbSNP:767147053
440 440 g, t dbSNP:775164738
450 450 c, g dbSNP:202207367
451 451 a, t dbSNP:762627623
452 452 a, g dbSNP:147603897
454 454 -, t dbSNP:775136572
455 455 a, t dbSNP:774595421
456 456 -, cg, g dbSNP:764106629
456 456 c, t dbSNP:140837467
457 457 a, g dbSNP:762317754
457 457 -, g dbSNP:760037737
459 459 a, g dbSNP:528073342
460 460 c, g dbSNP:767972506
461 461 a, g dbSNP:750507160
462 462 a, g dbSNP:141489184
463 463 a, t dbSNP:745348980
464 464 a, c dbSNP:769251440
467 467 c, t dbSNP:779560021
471 471 a, t dbSNP:748877941
472 472 c, g dbSNP:150823211
476 476 c, t dbSNP:774768645
479 479 c, t dbSNP:762146712
480 480 a, g, t dbSNP:377254479
483 483 a, g dbSNP:750911977
487 487 -, gt dbSNP:757151291
488 488 c, t dbSNP:761297270
499 499 g, t dbSNP:369806715
502 502 -, cgtt dbSNP:765161750
502 502 a, g dbSNP:753980725
506 506 c, t dbSNP:759766066
511 511 g, t dbSNP:765435625
527 527 g, t dbSNP:751345556
528 528 a, g dbSNP:757041782
546 546 a, c dbSNP:562250091
553 553 a, g dbSNP:750309054
555 555 c, t dbSNP:756055758
556 556 a, g dbSNP:779468403
558 558 a, g dbSNP:748859453
564 564 a, g dbSNP:754650033
565 565 a, g dbSNP:116013244
566 566 a, g dbSNP:79874663
567 567 a, g dbSNP:772287541
572 572 c, t dbSNP:773737131
573 573 a, t dbSNP:747462304
576 576 c, g dbSNP:147435182
580 580 a, g dbSNP:776846320
586 586 a, g dbSNP:759583939
588 588 c, t dbSNP:765466789
590 590 c, t dbSNP:539321506
595 595 c, g dbSNP:377380210
603 603 c, t dbSNP:139633590
606 606 -, c dbSNP:750219578
610 610 a, g dbSNP:369544223
614 614 c, t dbSNP:200464133
618 618 a, g dbSNP:756037366
619 619 a, c dbSNP:766357483
621 621 a, g dbSNP:753328843
631 631 g, t dbSNP:754489747
640 640 c, g dbSNP:778519016
642 642 c, t dbSNP:747708637
643 643 c, g dbSNP:758084539
645 645 c, t dbSNP:778218654
647 647 c, t dbSNP:749588255
649 649 -, t dbSNP:755308539
649 649 c, t dbSNP:747445697
661 661 c, t dbSNP:771542475
670 670 a, c dbSNP:777316599
678 678 c, t dbSNP:374449700
685 685 a, g, t dbSNP:769712526
748 748 -, gct dbSNP:750046089
763 763 a, g dbSNP:552852679

Target ORF information:

RefSeq Version NM_181269
Organism Homo sapiens (human)
Definition Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1-C-(k)DYK
NM_181269

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GAGTCTTATC TTAGGAGCAT TAGCTTGTTT CATCATCACC
CAAGCCAATG AGTCATTTAT AACAATCACA AGTCTGGAAA TCTGCATTGT CGTTTTTTTT
ATTCTAATAT ATGTGCTAAC CCTTCACCAC TTGCTGACCT ATTTACATTG GCCCTTACTT
GATCTTACCA ACAGTATCAT TACAGCTGTG TTCCTTTCAG TAGTTGCCAT CTTGGCCATG
CAAGAAAAGA AAAGAAGGCA TTTACTCTAT GTCGGGGGGT CCCTGTGTCT CACAGCGGTA
ATCGTGTGTT GCATCGATGC GTTTGTGGTC ACCACGAAGA TGAGGACCAA CTTGAAAAGA
TTCCTGGGAG TCGAAGTTGA AAGGAAGCTT TCCCCCGCCA AGGACGCCTA CCCCGAAACC
GGCCCCGACG CCCCGCAGAG GCCCGCCTGA

The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.


CloneID OHu30867D
Sequence Information ORF Nucleotide Sequence (Length: 186bp)
Protein sequence
SNP
Vector pcDNA3.1-C-(k)DYK or customized vector
Clone information Clone Map
Tag on pcDNA3.1-C-(k)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 15-MAR-2015
Organism Homo sapiens (human)
Product CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 5
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DN992496.1 and AY174122.1. On Jun 8, 2007 this sequence version replaced gi:31563401. Summary: This gene belongs to the chemokine-like factor gene superfamily, a novel family that is similar to the chemokine and the transmembrane 4 superfamilies of signaling molecules. The protein encoded by this gene may play an important role in testicular development. Alternatively spliced transcript variants encoding different isoforms have been identified. Naturally occurring read-through transcription occurs between this locus and the neighboring locus CKLF (chemokine-like factor).[provided by RefSeq, Feb 2011]. Transcript Variant: This variant (5) has multiple differences in the coding region, compared to variant 17, one of which results in a translational frameshift in the last coding exon. The encoded isoform (5) is shorter and contains a distinct C-terminus, compared to the protein (isoform 13) encoded by variant 17. ##Evidence-Data-START## Transcript exon combination :: AY174122.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2148874, SAMEA2151119 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GGATCTTACC AACAGTATCA TTACAGCTGT GTTCCTTTCA
GTAGTTGCCA TCTTGGCCAT GCAAGAAAAG AAAAGAAGGC ATTTACTCTA TGTCGGGGGG
CGGTAA
The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.
RefSeqNP_851800.1
CDS124..309
Misc Feature(1)112..114(+)
Exon (1)1..204
Gene:CMTM1
Gene Synonym:
Exon (2)205..303
Gene:CMTM1
Gene Synonym:
Exon (3)304..592
Gene:CMTM1
Gene Synonym:
Translation
Position Chain Variation Link
2 2 a, g dbSNP:7188654
14 14 c, t dbSNP:558298189
34 34 a, g dbSNP:572021560
41 41 -, g dbSNP:767266082
48 48 c, t dbSNP:540495607
61 61 c, t dbSNP:560416587
73 73 c, g dbSNP:376626299
74 74 c, t dbSNP:745968002
77 77 a, c dbSNP:780586407
81 81 c, t dbSNP:780378389
82 82 a, c, g dbSNP:747871843
84 84 a, c, t dbSNP:375996235
86 86 c, g dbSNP:771005209
87 87 a, g dbSNP:200484856
88 88 a, g dbSNP:185418981
94 94 a, g dbSNP:201681581
102 102 c, g dbSNP:377278322
110 110 c, t dbSNP:762625577
111 111 c, t dbSNP:764394648
119 119 a, c dbSNP:370693367
120 120 c, g dbSNP:757698734
132 132 g, t dbSNP:565102464
136 136 a, c, t dbSNP:750453605
148 148 a, g dbSNP:756263404
150 150 a, g dbSNP:780103056
151 151 a, t dbSNP:16956746
161 161 c, t dbSNP:755271934
165 165 c, t dbSNP:755724973
171 171 a, g dbSNP:746802219
181 181 c, g dbSNP:139697674
184 184 -, c dbSNP:777675871
186 186 a, g dbSNP:7193473
189 189 -, t dbSNP:34395956
196 196 a, g dbSNP:776680806
216 216 c, g dbSNP:369019205
222 222 a, c, t dbSNP:373007977
235 235 c, t dbSNP:746914928
237 237 c, t dbSNP:770787117
257 257 c, t dbSNP:780748501
263 263 c, t dbSNP:745428783
269 269 a, g dbSNP:769414970
281 281 -, g dbSNP:767147053
281 281 g, t dbSNP:775164738
291 291 c, g dbSNP:202207367
292 292 a, t dbSNP:762627623
293 293 a, g dbSNP:147603897
295 295 -, t dbSNP:775136572
296 296 a, t dbSNP:774595421
297 297 -, cg, g dbSNP:764106629
297 297 c, t dbSNP:140837467
298 298 a, g dbSNP:762317754
298 298 -, g dbSNP:760037737
300 300 a, g dbSNP:528073342
301 301 c, g dbSNP:767972506
302 302 a, g dbSNP:750507160
303 303 a, g dbSNP:141489184
304 304 c, t dbSNP:762146712
305 305 a, g, t dbSNP:377254479
308 308 a, g dbSNP:750911977
312 312 -, gt dbSNP:757151291
313 313 c, t dbSNP:761297270
324 324 g, t dbSNP:369806715
327 327 -, cgtt dbSNP:765161750
327 327 a, g dbSNP:753980725
331 331 c, t dbSNP:759766066
336 336 g, t dbSNP:765435625
352 352 g, t dbSNP:751345556
353 353 a, g dbSNP:757041782
371 371 a, c dbSNP:562250091
378 378 a, g dbSNP:750309054
380 380 c, t dbSNP:756055758
381 381 a, g dbSNP:779468403
383 383 a, g dbSNP:748859453
389 389 a, g dbSNP:754650033
390 390 a, g dbSNP:116013244
391 391 a, g dbSNP:79874663
392 392 a, g dbSNP:772287541
397 397 c, t dbSNP:773737131
398 398 a, t dbSNP:747462304
401 401 c, g dbSNP:147435182
405 405 a, g dbSNP:776846320
411 411 a, g dbSNP:759583939
413 413 c, t dbSNP:765466789
415 415 c, t dbSNP:539321506
420 420 c, g dbSNP:377380210
428 428 c, t dbSNP:139633590
431 431 -, c dbSNP:750219578
435 435 a, g dbSNP:369544223
439 439 c, t dbSNP:200464133
443 443 a, g dbSNP:756037366
444 444 a, c dbSNP:766357483
446 446 a, g dbSNP:753328843
456 456 g, t dbSNP:754489747
465 465 c, g dbSNP:778519016
467 467 c, t dbSNP:747708637
468 468 c, g dbSNP:758084539
470 470 c, t dbSNP:778218654
472 472 c, t dbSNP:749588255
474 474 -, t dbSNP:755308539
474 474 c, t dbSNP:747445697
486 486 c, t dbSNP:771542475
495 495 a, c dbSNP:777316599
503 503 c, t dbSNP:374449700
510 510 a, g, t dbSNP:769712526
573 573 -, gct dbSNP:750046089
588 588 a, g dbSNP:552852679

Target ORF information:

RefSeq Version NM_181283
Organism Homo sapiens (human)
Definition Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 5, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1-C-(k)DYK
NM_181283

ORF Insert Sequence:

1
61
121
181
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GGATCTTACC AACAGTATCA TTACAGCTGT GTTCCTTTCA
GTAGTTGCCA TCTTGGCCAT GCAAGAAAAG AAAAGAAGGC ATTTACTCTA TGTCGGGGGG
CGGTAA

The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.


CloneID OHu07548D
Sequence Information ORF Nucleotide Sequence (Length: 345bp)
Protein sequence
SNP
Vector pcDNA3.1-C-(k)DYK or customized vector
Clone information Clone Map
Tag on pcDNA3.1-C-(k)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 15-MAR-2015
Organism Homo sapiens (human)
Product CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 2
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DN992496.1 and AY174119.1. On Jun 8, 2007 this sequence version replaced gi:31563393. Summary: This gene belongs to the chemokine-like factor gene superfamily, a novel family that is similar to the chemokine and the transmembrane 4 superfamilies of signaling molecules. The protein encoded by this gene may play an important role in testicular development. Alternatively spliced transcript variants encoding different isoforms have been identified. Naturally occurring read-through transcription occurs between this locus and the neighboring locus CKLF (chemokine-like factor).[provided by RefSeq, Feb 2011]. Transcript Variant: This variant (2) has multiple differences in the coding region, compared to variant 17, one of which results in a translational frameshift in the last coding exon. The encoded isoform (2) is shorter and contains a distinct C-terminus, compared to the protein (isoform 13) encoded by variant 17. ##Evidence-Data-START## Transcript exon combination :: AY174119.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968968, SAMEA2148093 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GAGTCTTATC TTAGGAGCAT TAGCTTGTTT CATCATCACC
CAAGCCAATG AGTCATTTAT AACAATCACA AGTCTGGAAA TCTGCATTGT CGTTTTTTTT
ATTCTAATAT ATGTGCTAAC CCTTCACCAC TTGCTGACCT ATTTACATTG GCCCTTACTT
GATCTTACCA ACAGTATCAT TACAGCTGTG TTCCTTTCAG TAGTTGCCAT CTTGGCCATG
CAAGAAAAGA AAAGAAGGCA TTTACTCTAT GTCGGGGGGC GGTAA
The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.
RefSeqNP_851787.1
CDS124..468
Misc Feature(1)112..114(+)
Misc Feature(2)187..249(+)
Misc Feature(3)259..321(+)
Misc Feature(4)358..420(+)
Exon (1)1..204
Gene:CMTM1
Gene Synonym:
Exon (2)205..363
Gene:CMTM1
Gene Synonym:
Exon (3)364..462
Gene:CMTM1
Gene Synonym:
Exon (4)463..751
Gene:CMTM1
Gene Synonym:
Translation
Position Chain Variation Link
2 2 a, g dbSNP:7188654
14 14 c, t dbSNP:558298189
34 34 a, g dbSNP:572021560
41 41 -, g dbSNP:767266082
48 48 c, t dbSNP:540495607
61 61 c, t dbSNP:560416587
73 73 c, g dbSNP:376626299
74 74 c, t dbSNP:745968002
77 77 a, c dbSNP:780586407
81 81 c, t dbSNP:780378389
82 82 a, c, g dbSNP:747871843
84 84 a, c, t dbSNP:375996235
86 86 c, g dbSNP:771005209
87 87 a, g dbSNP:200484856
88 88 a, g dbSNP:185418981
94 94 a, g dbSNP:201681581
102 102 c, g dbSNP:377278322
110 110 c, t dbSNP:762625577
111 111 c, t dbSNP:764394648
119 119 a, c dbSNP:370693367
120 120 c, g dbSNP:757698734
132 132 g, t dbSNP:565102464
136 136 a, c, t dbSNP:750453605
148 148 a, g dbSNP:756263404
150 150 a, g dbSNP:780103056
151 151 a, t dbSNP:16956746
161 161 c, t dbSNP:755271934
165 165 c, t dbSNP:755724973
171 171 a, g dbSNP:746802219
181 181 c, g dbSNP:139697674
184 184 -, c dbSNP:777675871
186 186 a, g dbSNP:7193473
189 189 -, t dbSNP:34395956
196 196 a, g dbSNP:776680806
207 207 -, tctta dbSNP:748162727
220 220 g, t dbSNP:373908730
222 222 a, g dbSNP:749962292
226 226 a, c, g dbSNP:572608128
227 227 c, g dbSNP:766119406
238 238 a, g dbSNP:754136044
240 240 c, t dbSNP:755417525
247 247 a, g dbSNP:367806211
251 251 a, g dbSNP:753161061
252 252 c, t dbSNP:758927415
267 267 a, c dbSNP:143266143
284 284 c, t dbSNP:747160036
294 294 c, t dbSNP:771046877
295 295 -, tttttt dbSNP:773521289
295 295 a, g, t dbSNP:781528376
296 296 g, t dbSNP:768460744
302 302 c, t dbSNP:774313744
303 303 a, t dbSNP:748044817
304 304 a, t dbSNP:772135461
307 307 c, t dbSNP:772840980
309 309 a, t dbSNP:760288124
310 310 a, c, t dbSNP:765924026
313 313 c, t dbSNP:759142039
318 318 a, g dbSNP:765536805
333 333 c, g dbSNP:753064838
339 339 a, g dbSNP:574920092
339 339 -, g dbSNP:749674617
344 344 a, g dbSNP:537027985
362 362 g, t dbSNP:751571188
375 375 c, g dbSNP:369019205
381 381 a, c, t dbSNP:373007977
394 394 c, t dbSNP:746914928
396 396 c, t dbSNP:770787117
416 416 c, t dbSNP:780748501
422 422 c, t dbSNP:745428783
428 428 a, g dbSNP:769414970
440 440 -, g dbSNP:767147053
440 440 g, t dbSNP:775164738
450 450 c, g dbSNP:202207367
451 451 a, t dbSNP:762627623
452 452 a, g dbSNP:147603897
454 454 -, t dbSNP:775136572
455 455 a, t dbSNP:774595421
456 456 -, cg, g dbSNP:764106629
456 456 c, t dbSNP:140837467
457 457 a, g dbSNP:762317754
457 457 -, g dbSNP:760037737
459 459 a, g dbSNP:528073342
460 460 c, g dbSNP:767972506
461 461 a, g dbSNP:750507160
462 462 a, g dbSNP:141489184
463 463 c, t dbSNP:762146712
464 464 a, g, t dbSNP:377254479
467 467 a, g dbSNP:750911977
471 471 -, gt dbSNP:757151291
472 472 c, t dbSNP:761297270
483 483 g, t dbSNP:369806715
486 486 -, cgtt dbSNP:765161750
486 486 a, g dbSNP:753980725
490 490 c, t dbSNP:759766066
495 495 g, t dbSNP:765435625
511 511 g, t dbSNP:751345556
512 512 a, g dbSNP:757041782
530 530 a, c dbSNP:562250091
537 537 a, g dbSNP:750309054
539 539 c, t dbSNP:756055758
540 540 a, g dbSNP:779468403
542 542 a, g dbSNP:748859453
548 548 a, g dbSNP:754650033
549 549 a, g dbSNP:116013244
550 550 a, g dbSNP:79874663
551 551 a, g dbSNP:772287541
556 556 c, t dbSNP:773737131
557 557 a, t dbSNP:747462304
560 560 c, g dbSNP:147435182
564 564 a, g dbSNP:776846320
570 570 a, g dbSNP:759583939
572 572 c, t dbSNP:765466789
574 574 c, t dbSNP:539321506
579 579 c, g dbSNP:377380210
587 587 c, t dbSNP:139633590
590 590 -, c dbSNP:750219578
594 594 a, g dbSNP:369544223
598 598 c, t dbSNP:200464133
602 602 a, g dbSNP:756037366
603 603 a, c dbSNP:766357483
605 605 a, g dbSNP:753328843
615 615 g, t dbSNP:754489747
624 624 c, g dbSNP:778519016
626 626 c, t dbSNP:747708637
627 627 c, g dbSNP:758084539
629 629 c, t dbSNP:778218654
631 631 c, t dbSNP:749588255
633 633 -, t dbSNP:755308539
633 633 c, t dbSNP:747445697
645 645 c, t dbSNP:771542475
654 654 a, c dbSNP:777316599
662 662 c, t dbSNP:374449700
669 669 a, g, t dbSNP:769712526
732 732 -, gct dbSNP:750046089
747 747 a, g dbSNP:552852679

Target ORF information:

RefSeq Version NM_181270
Organism Homo sapiens (human)
Definition Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1-C-(k)DYK
NM_181270

ORF Insert Sequence:

1
61
121
181
241
301
ATGGATCCTG AACACGCCAA ACCTGAGTCA TCCGAGGCAC CTTCAGGGAA CTTGAAACAA 
CCGGAGACTG CCGCAGCCCT GAGTCTTATC TTAGGAGCAT TAGCTTGTTT CATCATCACC
CAAGCCAATG AGTCATTTAT AACAATCACA AGTCTGGAAA TCTGCATTGT CGTTTTTTTT
ATTCTAATAT ATGTGCTAAC CCTTCACCAC TTGCTGACCT ATTTACATTG GCCCTTACTT
GATCTTACCA ACAGTATCAT TACAGCTGTG TTCCTTTCAG TAGTTGCCAT CTTGGCCATG
CAAGAAAAGA AAAGAAGGCA TTTACTCTAT GTCGGGGGGC GGTAA

The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.