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LSM12 cDNA ORF clone, Homo sapiens (human)

Gene Symbol LSM12
Entrez Gene ID 124801
Full Name LSM12 homolog
Synonyms PNAS-135
General protein information
Preferred Names
protein LSM12 homolog
Names
protein LSM12 homolog
Gene Type protein-coding
Organism Homo sapiens (human)
Genome

17

17q21.31

Summary lac of sum
Disorder MIM:

611793


mRNA and Protein(s)

mRNA Protein Name
NM_152344 NP_689557 protein LSM12 homolog
XM_011524309 XP_011522611 protein LSM12 homolog isoform X1


Homo sapiens (human) LSM12 NP_689557.1
Pan troglodytes (chimpanzee) LSM12 XP_523664.3
Macaca mulatta (Rhesus monkey) LSM12 XP_001114115.1
Canis lupus familiaris (dog) LSM12 XP_537623.2
Bos taurus (cattle) LSM12 NP_001069566.2
Mus musculus (house mouse) Lsm12 NP_766535.1
Rattus norvegicus (Norway rat) Lsm12 NP_001099313.1
Gallus gallus (chicken) TMEM101 NP_001131123.1
Danio rerio (zebrafish) lsm12b NP_998313.1
Danio rerio (zebrafish) lsm12a NP_999982.1
Drosophila melanogaster (fruit fly) CG15735 NP_572777.2

Function

ID Name Evidence
GO:0005515 protein binding IPI

Related articles in PubMed

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LSM12 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LSM12 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID RefSeq Accession Definition **Vector *Turnaround time Price Select
OHu06735
NM_152344 Homo sapiens LSM12 homolog (LSM12), mRNA. pcDNA3.1+/C-(K)DYK or customized vector
in pcDNA3.1+/C-(K)DYK
Starting from $49.50
$99.00
OHu75317 XM_011524309 PREDICTED: Homo sapiens LSM12 homolog (S. cerevisiae) (LSM12), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $69.30
$99.00

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.


CloneID OHu06735
Clone ID Related Accession (Same CDS sequence) NM_152344
Accession Version NM_152344.3 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 588bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags COA
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 04-JUL-2015
Organism Homo sapiens (human)
Product protein LSM12 homolog
Comment VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC066298.1, BC044587.1 and AL832076.1. On Oct 28, 2008 this sequence version replaced gi:141803542. ##Evidence-Data-START## Transcript exon combination :: BC066298.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END##

1
61
121
181
241
301
361
421
481
541
ATGGCGGCTC CTCCGGGCGA GTACTTCAGC GTTGGGAGCC AGGTGTCGTG CCGGACGTGC 
CAGGAGCAGC GGCTGCAGGG CGAGGTGGTA GCCTTTGACT ACCAATCCAA AATGCTGGCT
TTAAAATGTC CCTCTTCCAG TGGAAAGCCC AACCATGCAG ACATCTTGCT CATAAACTTA
CAGTATGTTT CAGAAGTGGA AATAATTAAT GACCGAACAG AAACCCCTCC TCCCCTAGCT
TCACTCAATG TTAGTAAGCT TGCCAGCAAA GCACGGACAG AGAAGGAGGA GAAGCTGAGC
CAGGCCTATG CAATCAGTGC TGGTGTCTCT CTAGAGGGCC AGCAGCTCTT CCAGACCATT
CACAAGACCA TTAAAGACTG TAAATGGCAA GAAAAAAACA TCGTAGTCAT GGAAGAAGTT
GTTATTACAC CCCCATATCA AGTGGAAAAC TGTAAAGGCA AAGAGGGGAG TGCACTGAGC
CATGTACGCA AAATAGTTGA AAAACATTTT AGAGACGTGG AAAGCCAAAA GATACTGCAA
CGTTCACAAG CCCAGCAACC ACAGAAGGAG GCTGCCCTGT CATCCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_689557.1
CDS324..911
Misc Feature(1)105..107(+)
Misc Feature(2)327..329(+)
Misc Feature(3)342..524(+)
Misc Feature(4)366..449(+)
Misc Feature(5)420..500(+)
Misc Feature(6)486..521(+)
Misc Feature(7)546..548(+)
Misc Feature(8)555..818(+)
Exon (1)1..177
Gene:LSM12
Gene Synonym:
Exon (2)178..447
Gene:LSM12
Gene Synonym:
Exon (3)448..581
Gene:LSM12
Gene Synonym:
Exon (4)582..691
Gene:LSM12
Gene Synonym:
Exon (5)692..818
Gene:LSM12
Gene Synonym:
Exon (6)819..2484
Gene:LSM12
Gene Synonym:
Translation
Position Chain Variation Link
39 39 c, t dbSNP:554576074
81 81 c, t dbSNP:536534741
115 115 c, t dbSNP:565926802
126 126 a, g dbSNP:772008278
149 149 c, t dbSNP:553985272
238 238 a, g dbSNP:569278220
242 242 c, g dbSNP:9900620
284 284 c, t dbSNP:776435226
289 289 c, g, t dbSNP:200239929
300 300 c, g dbSNP:760399103
301 301 -, ccg dbSNP:758214554
302 302 c, g dbSNP:772634041
303 303 -, ccg dbSNP:780029903
330 330 a, g dbSNP:771584887
341 341 c, g dbSNP:748056348
347 347 c, t dbSNP:774301186
365 365 a, g dbSNP:768447457
386 386 a, g dbSNP:749027027
393 393 a, c dbSNP:374081346
422 422 c, t dbSNP:756399048
429 429 g, t dbSNP:746072340
434 434 a, g dbSNP:781179298
440 440 a, g dbSNP:757313092
455 455 c, t dbSNP:769554854
466 466 g, t dbSNP:746102375
472 472 c, t dbSNP:781438366
475 475 a, g dbSNP:533911651
506 506 a, g dbSNP:747169101
512 512 c, t dbSNP:147935602
518 518 a, g dbSNP:532362853
528 528 a, c dbSNP:759013794
537 537 c, g dbSNP:753230737
538 538 a, g dbSNP:779438174
540 540 a, g dbSNP:371987170
542 542 a, c dbSNP:566589300
548 548 c, g dbSNP:767143749
552 552 a, c dbSNP:761361718
553 553 c, g dbSNP:17854322
557 557 c, t dbSNP:144774734
558 558 c, t dbSNP:140825054
571 571 a, g dbSNP:532950250
572 572 c, t dbSNP:775357452
573 573 g, t dbSNP:769610061
576 576 a, g dbSNP:554563532
588 588 -, c dbSNP:35289335
588 588 a, c dbSNP:770609435
597 597 c, t dbSNP:760996653
598 598 a, g dbSNP:773524576
611 611 c, g dbSNP:772280507
620 620 a, g dbSNP:748177855
623 623 c, t dbSNP:774563068
627 627 g, t dbSNP:769276056
636 636 a, g dbSNP:749731695
652 652 c, g dbSNP:566135138
654 654 c, t dbSNP:756384540
658 658 a, g dbSNP:200007996
659 659 c, g dbSNP:142436733
662 662 c, t dbSNP:180785369
668 668 c, g dbSNP:757919263
671 671 c, t dbSNP:752269831
685 685 a, t dbSNP:764621164
686 686 c, t dbSNP:754992269
692 692 c, t dbSNP:199904232
693 693 a, g dbSNP:370655571
707 707 a, g dbSNP:35841935
713 713 a, g dbSNP:767392737
714 714 a, g dbSNP:228753
725 725 a, c, t dbSNP:774391850
737 737 a, g dbSNP:200915259
755 755 a, c, t dbSNP:184059566
767 767 a, g dbSNP:776079287
796 796 c, t dbSNP:770345410
806 806 c, t dbSNP:756074281
809 809 a, g dbSNP:373598475
810 810 c, t dbSNP:777029085
839 839 c, t dbSNP:145390048
840 840 a, c, g, t dbSNP:59168537
856 856 c, t dbSNP:748942539
862 862 a, g dbSNP:368988511
866 866 c, t dbSNP:779763432
894 894 c, g dbSNP:769383644
900 900 c, t dbSNP:745836219
915 915 c, t dbSNP:781209619
916 916 -, gtaca dbSNP:772739905
916 916 a, g dbSNP:757090243
917 917 -, ta dbSNP:759892919
920 920 a, t dbSNP:751370357
924 924 a, g dbSNP:777622385
927 927 a, g dbSNP:758595069
928 928 g, t dbSNP:752913316
933 933 c, t dbSNP:765331811
956 956 -, aggcg dbSNP:775682915
956 956 a, g dbSNP:759541678
977 977 c, g dbSNP:556130229
993 993 -, a dbSNP:35468252
1103 1103 a, g dbSNP:537416688
1132 1132 a, g dbSNP:573893283
1151 1151 a, c dbSNP:555224841
1216 1216 c, g dbSNP:533763440
1294 1294 c, t dbSNP:566327345
1377 1377 c, t dbSNP:551500251
1408 1408 g, t dbSNP:190750240
1441 1441 -, t, tt dbSNP:554743220
1573 1573 a, c dbSNP:569206465
1616 1616 c, t dbSNP:550970643
1745 1745 g, t dbSNP:529257121
1893 1893 c, g dbSNP:562395989
2153 2153 c, t dbSNP:547310956
2285 2285 a, g dbSNP:113242069
2308 2308 g, t dbSNP:11654662
2360 2360 c, t dbSNP:528739025
2374 2374 -, t dbSNP:545850391
2428 2428 a, t dbSNP:564681210
2466 2466 -, c dbSNP:771428272

Target ORF information:

RefSeq Version NM_152344
Organism Homo sapiens (human)
Definition Homo sapiens LSM12 homolog (LSM12), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_152344

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
ATGGCGGCTC CTCCGGGCGA GTACTTCAGC GTTGGGAGCC AGGTGTCGTG CCGGACGTGC 
CAGGAGCAGC GGCTGCAGGG CGAGGTGGTA GCCTTTGACT ACCAATCCAA AATGCTGGCT
TTAAAATGTC CCTCTTCCAG TGGAAAGCCC AACCATGCAG ACATCTTGCT CATAAACTTA
CAGTATGTTT CAGAAGTGGA AATAATTAAT GACCGAACAG AAACCCCTCC TCCCCTAGCT
TCACTCAATG TTAGTAAGCT TGCCAGCAAA GCACGGACAG AGAAGGAGGA GAAGCTGAGC
CAGGCCTATG CAATCAGTGC TGGTGTCTCT CTAGAGGGCC AGCAGCTCTT CCAGACCATT
CACAAGACCA TTAAAGACTG TAAATGGCAA GAAAAAAACA TCGTAGTCAT GGAAGAAGTT
GTTATTACAC CCCCATATCA AGTGGAAAAC TGTAAAGGCA AAGAGGGGAG TGCACTGAGC
CATGTACGCA AAATAGTTGA AAAACATTTT AGAGACGTGG AAAGCCAAAA GATACTGCAA
CGTTCACAAG CCCAGCAACC ACAGAAGGAG GCTGCCCTGT CATCCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu75317
Clone ID Related Accession (Same CDS sequence) XM_011524309
Accession Version XM_011524309.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 348bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product protein LSM12 homolog isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_010783.16) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
ATGGCGGCTC CTCCGGGCGA GTACTTCAGC GTTGGGAGCC AGGTGTCGTG CCGGACGTGC 
CAGGAGCAGC GGCTGCAGGG CGAGGTGGTA GCCTTTGACT ACCAATCCAA AATGCTGGCT
TTAAAATGTC CCTCTTCCAG TGGAAAGCCC AACCATGCAG ACATCTTGCT CATAAACTTA
CAGTATGTTT CAGAAGTGGA AATAATTAAT GACCGAACAG AAACCCCTCC TCCCCTAGCT
TCACTCAATG TTAGTAAGGT GCTGGGAAAT GCCAGGATGA TTAAAACACC CCTCTTGCCC
TCCAGAATCT CACATTTGTT GGGAGTGGTG AGGGACAGCA GCATTTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_011522611.1
CDS88..435
Misc Feature(1)106..288(+)
Misc Feature(2)130..213(+)
Misc Feature(3)184..264(+)
Misc Feature(4)250..285(+)
Translation
Position Chain Variation Link
2 2 a, g dbSNP:569278220
6 6 c, g dbSNP:9900620
48 48 c, t dbSNP:776435226
53 53 c, g, t dbSNP:200239929
64 64 c, g dbSNP:760399103
65 65 -, ccg dbSNP:758214554
66 66 c, g dbSNP:772634041
67 67 -, ccg dbSNP:780029903
94 94 a, g dbSNP:771584887
105 105 c, g dbSNP:748056348
111 111 c, t dbSNP:774301186
129 129 a, g dbSNP:768447457
150 150 a, g dbSNP:749027027
157 157 a, c dbSNP:374081346
186 186 c, t dbSNP:756399048
193 193 g, t dbSNP:746072340
198 198 a, g dbSNP:781179298
204 204 a, g dbSNP:757313092
219 219 c, t dbSNP:769554854
230 230 g, t dbSNP:746102375
236 236 c, t dbSNP:781438366
239 239 a, g dbSNP:533911651
270 270 a, g dbSNP:747169101
276 276 c, t dbSNP:147935602
282 282 a, g dbSNP:532362853
292 292 a, c dbSNP:759013794
301 301 c, g dbSNP:753230737
302 302 a, g dbSNP:779438174
304 304 a, g dbSNP:371987170
306 306 a, c dbSNP:566589300
312 312 c, g dbSNP:767143749
316 316 a, c dbSNP:761361718
317 317 c, g dbSNP:17854322
321 321 c, t dbSNP:144774734
322 322 c, t dbSNP:140825054
335 335 a, g dbSNP:532950250
336 336 c, t dbSNP:775357452
337 337 g, t dbSNP:769610061
340 340 a, g dbSNP:554563532
374 374 c, t dbSNP:761184460
389 389 c, t dbSNP:773853871
440 440 c, g dbSNP:532824615

Target ORF information:

RefSeq Version XM_011524309
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens LSM12 homolog (S. cerevisiae) (LSM12), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_011524309

ORF Insert Sequence:

1
61
121
181
241
301
ATGGCGGCTC CTCCGGGCGA GTACTTCAGC GTTGGGAGCC AGGTGTCGTG CCGGACGTGC 
CAGGAGCAGC GGCTGCAGGG CGAGGTGGTA GCCTTTGACT ACCAATCCAA AATGCTGGCT
TTAAAATGTC CCTCTTCCAG TGGAAAGCCC AACCATGCAG ACATCTTGCT CATAAACTTA
CAGTATGTTT CAGAAGTGGA AATAATTAAT GACCGAACAG AAACCCCTCC TCCCCTAGCT
TCACTCAATG TTAGTAAGGT GCTGGGAAAT GCCAGGATGA TTAAAACACC CCTCTTGCCC
TCCAGAATCT CACATTTGTT GGGAGTGGTG AGGGACAGCA GCATTTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

book

Novel Sm-like proteins with long C-terminal tails and associated methyltransferases
FEBS Lett. 569 (1-3), 18-26 (2004)
Albrecht M and Lengauer T.


book

Lineage-specific gene duplication and loss in human and great ape evolution
PLoS Biol. 2 (7), E207 (2004)
Fortna A, Kim Y, MacLaren E, Marshall K, Hahn G, Meltesen L, Brenton M, Hink R, Burgers S, Hernandez-Boussard T, Karimpour-Fard A, Glueck D, McGavran L, Berry R, Pollack J and Sikela JM.


 
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