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EPYC cDNA ORF clone, Homo sapiens (human)

Gene Symbol EPYC
Entrez Gene ID 1833
Full Name epiphycan
Synonyms DSPG3, PGLB, Pg-Lb, SLRR3B
General protein information
Preferred Names
epiphycan
Names
epiphycan
proteoglycan-lb
epiphycan proteoglycan
dermatan sulfate proteoglycan 3
small chondroitin/dermatan sulfate proteoglycan
Gene Type protein-coding
Organism Homo sapiens (human)
Genome

12

12q21

Summary Dermatan sulfate proteoglycan 3 is a member of the small leucine-rich repeat proteoglycan family. This gene is composed of seven exons. It regulates fibrillogenesis by interacting with collagen fibrils and other extracellular matrix proteins. [provided by RefSeq, Jul 2008]. lac of sum
Disorder MIM:

601657


mRNA and Protein(s)

mRNA Protein Name
XM_011538007 XP_011536309 epiphycan isoform X1
XM_011538008 XP_011536310 epiphycan isoform X2
NM_004950 NP_004941 epiphycan precursor


Homo sapiens (human) EPYC NP_004941.2
Pan troglodytes (chimpanzee) EPYC XP_001134960.1
Macaca mulatta (Rhesus monkey) EPYC XP_001102394.1
Canis lupus familiaris (dog) EPYC XP_005629276.1
Bos taurus (cattle) EPYC NP_776732.1
Mus musculus (house mouse) Epyc NP_031910.1
Rattus norvegicus (Norway rat) Epyc NP_001101558.1
Gallus gallus (chicken) EPYC NP_001004382.1
Xenopus (Silurana) tropicalis (western clawed frog) epyc NP_001005627.1


GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following EPYC gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the EPYC cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID RefSeq Accession Definition **Vector *Turnaround time Price Select
OHu12959 XM_011538007 PREDICTED: Homo sapiens epiphycan (EPYC), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $139.30
$199.00
OHu57383 XM_011538008 PREDICTED: Homo sapiens epiphycan (EPYC), transcript variant X2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 5-7 $139.30
$199.00
OHu12959 NM_004950 Homo sapiens epiphycan (EPYC), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $139.30
$199.00
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.


CloneID OHu12959
Clone ID Related Accession (Same CDS sequence) NM_004950 , XM_011538007
Accession Version XM_011538007.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 969bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product epiphycan isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_029419.13) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
ATGAAGACAT TAGCAGGACT TGTTCTGGGA CTTGTCATCT TTGATGCTGC TGTGACTGCC 
CCAACTCTAG AGTCCATCAA CTATGACTCA GAAACCTATG ATGCCACCTT AGAAGACCTG
GATAATTTGT ACAACTATGA AAACATACCT GTTGATAAAG TTGAGATTGA AATAGCCACA
GTGATGCCTT CAGGGAACAG AGAGCTCCTC ACTCCACCCC CACAGCCTGA GAAGGCCCAG
GAAGAGGAAG AGGAGGAGGA ATCTACTCCC AGGCTGATTG ATGGCTCTTC TCCCCAGGAG
CCTGAATTCA CAGGGGTTCT GGGGCCACAC ACAAATGAAG ACTTTCCAAC CTGTCTTTTG
TGTACTTGTA TAAGTACCAC CGTGTACTGT GATGACCATG AACTTGATGC TATTCCTCCG
CTGCCAAAGA ACACCGCTTA TTTCTATTCC CGCTTTAACA GAATTAAAAA GATCAACAAA
AATGACTTTG CAAGCCTAAG TGATTTAAAA AGGATTGATC TGACATCAAA TTTAATATCT
GAGATTGATG AAGATGCATT CCGAAAACTG CCTCAACTTC GAGAGCTTGT CCTGCGTGAC
AACAAAATAA GGCAGCTCCC AGAATTGCCA ACCACTTTGA CATTTATTGA TATTAGCAAC
AATAGACTTG GAAGGAAAGG GATAAAGCAA GAAGCATTTA AAGACATGTA TGATCTCCAT
CATCTGTACC TCACTGATAA CAACTTGGAC CACATCCCTC TGCCACTCCC AGAAAATCTA
CGAGCCCTTC ACCTCCAGAA TAACAACATT CTGGAAATGC ACGAAGATAC GTTCTGCAAT
GTTAAAAATT TGACTTATAT TCGTAAGGCA CTAGAGGACA TTCGATTGGA TGGAAACCCT
ATTAATCTCA GCAAAACTCC TCAAGCATAC ATGTGTCTAC CTCGTCTGCC TGTTGGGAGC
CTTGTCTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_011536309.1
CDS85..1053
Misc Feature(1)445..519(+)
Misc Feature(2)460..516(+)
Misc Feature(3)517..588(+)
Misc Feature(4)535..693(+)
Misc Feature(5)583..894(+)
Misc Feature(6)589..660(+)
Misc Feature(7)610..882(+)
Misc Feature(8)661..720(+)
Misc Feature(9)715..894(+)
Misc Feature(10)721..798(+)
Misc Feature(11)799..861(+)
Misc Feature(12)862..933(+)
Misc Feature(13)934..987(+)
Translation

Target ORF information:

RefSeq Version XM_011538007
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens epiphycan (EPYC), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_011538007

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
ATGAAGACAT TAGCAGGACT TGTTCTGGGA CTTGTCATCT TTGATGCTGC TGTGACTGCC 
CCAACTCTAG AGTCCATCAA CTATGACTCA GAAACCTATG ATGCCACCTT AGAAGACCTG
GATAATTTGT ACAACTATGA AAACATACCT GTTGATAAAG TTGAGATTGA AATAGCCACA
GTGATGCCTT CAGGGAACAG AGAGCTCCTC ACTCCACCCC CACAGCCTGA GAAGGCCCAG
GAAGAGGAAG AGGAGGAGGA ATCTACTCCC AGGCTGATTG ATGGCTCTTC TCCCCAGGAG
CCTGAATTCA CAGGGGTTCT GGGGCCACAC ACAAATGAAG ACTTTCCAAC CTGTCTTTTG
TGTACTTGTA TAAGTACCAC CGTGTACTGT GATGACCATG AACTTGATGC TATTCCTCCG
CTGCCAAAGA ACACCGCTTA TTTCTATTCC CGCTTTAACA GAATTAAAAA GATCAACAAA
AATGACTTTG CAAGCCTAAG TGATTTAAAA AGGATTGATC TGACATCAAA TTTAATATCT
GAGATTGATG AAGATGCATT CCGAAAACTG CCTCAACTTC GAGAGCTTGT CCTGCGTGAC
AACAAAATAA GGCAGCTCCC AGAATTGCCA ACCACTTTGA CATTTATTGA TATTAGCAAC
AATAGACTTG GAAGGAAAGG GATAAAGCAA GAAGCATTTA AAGACATGTA TGATCTCCAT
CATCTGTACC TCACTGATAA CAACTTGGAC CACATCCCTC TGCCACTCCC AGAAAATCTA
CGAGCCCTTC ACCTCCAGAA TAACAACATT CTGGAAATGC ACGAAGATAC GTTCTGCAAT
GTTAAAAATT TGACTTATAT TCGTAAGGCA CTAGAGGACA TTCGATTGGA TGGAAACCCT
ATTAATCTCA GCAAAACTCC TCAAGCATAC ATGTGTCTAC CTCGTCTGCC TGTTGGGAGC
CTTGTCTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu57383
Clone ID Related Accession (Same CDS sequence) XM_011538008
Accession Version XM_011538008.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 786bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product epiphycan isoform X2
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_029419.13) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
ATGCCTTCAG GGAACAGAGA GCTCCTCACT CCACCCCCAC AGCCTGAGAA GGCCCAGGAA 
GAGGAAGAGG AGGAGGAATC TACTCCCAGG CTGATTGATG GCTCTTCTCC CCAGGAGCCT
GAATTCACAG GGGTTCTGGG GCCACACACA AATGAAGACT TTCCAACCTG TCTTTTGTGT
ACTTGTATAA GTACCACCGT GTACTGTGAT GACCATGAAC TTGATGCTAT TCCTCCGCTG
CCAAAGAACA CCGCTTATTT CTATTCCCGC TTTAACAGAA TTAAAAAGAT CAACAAAAAT
GACTTTGCAA GCCTAAGTGA TTTAAAAAGG ATTGATCTGA CATCAAATTT AATATCTGAG
ATTGATGAAG ATGCATTCCG AAAACTGCCT CAACTTCGAG AGCTTGTCCT GCGTGACAAC
AAAATAAGGC AGCTCCCAGA ATTGCCAACC ACTTTGACAT TTATTGATAT TAGCAACAAT
AGACTTGGAA GGAAAGGGAT AAAGCAAGAA GCATTTAAAG ACATGTATGA TCTCCATCAT
CTGTACCTCA CTGATAACAA CTTGGACCAC ATCCCTCTGC CACTCCCAGA AAATCTACGA
GCCCTTCACC TCCAGAATAA CAACATTCTG GAAATGCACG AAGATACGTT CTGCAATGTT
AAAAATTTGA CTTATATTCG TAAGGCACTA GAGGACATTC GATTGGATGG AAACCCTATT
AATCTCAGCA AAACTCCTCA AGCATACATG TGTCTACCTC GTCTGCCTGT TGGGAGCCTT
GTCTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_011536310.1
CDS93..878
Misc Feature(1)270..344(+)
Misc Feature(2)285..341(+)
Misc Feature(3)342..413(+)
Misc Feature(4)360..518(+)
Misc Feature(5)408..719(+)
Misc Feature(6)414..485(+)
Misc Feature(7)435..707(+)
Misc Feature(8)486..545(+)
Misc Feature(9)540..719(+)
Misc Feature(10)546..623(+)
Misc Feature(11)624..686(+)
Misc Feature(12)687..758(+)
Misc Feature(13)759..812(+)
Translation

Target ORF information:

RefSeq Version XM_011538008
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens epiphycan (EPYC), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_011538008

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
ATGCCTTCAG GGAACAGAGA GCTCCTCACT CCACCCCCAC AGCCTGAGAA GGCCCAGGAA 
GAGGAAGAGG AGGAGGAATC TACTCCCAGG CTGATTGATG GCTCTTCTCC CCAGGAGCCT
GAATTCACAG GGGTTCTGGG GCCACACACA AATGAAGACT TTCCAACCTG TCTTTTGTGT
ACTTGTATAA GTACCACCGT GTACTGTGAT GACCATGAAC TTGATGCTAT TCCTCCGCTG
CCAAAGAACA CCGCTTATTT CTATTCCCGC TTTAACAGAA TTAAAAAGAT CAACAAAAAT
GACTTTGCAA GCCTAAGTGA TTTAAAAAGG ATTGATCTGA CATCAAATTT AATATCTGAG
ATTGATGAAG ATGCATTCCG AAAACTGCCT CAACTTCGAG AGCTTGTCCT GCGTGACAAC
AAAATAAGGC AGCTCCCAGA ATTGCCAACC ACTTTGACAT TTATTGATAT TAGCAACAAT
AGACTTGGAA GGAAAGGGAT AAAGCAAGAA GCATTTAAAG ACATGTATGA TCTCCATCAT
CTGTACCTCA CTGATAACAA CTTGGACCAC ATCCCTCTGC CACTCCCAGA AAATCTACGA
GCCCTTCACC TCCAGAATAA CAACATTCTG GAAATGCACG AAGATACGTT CTGCAATGTT
AAAAATTTGA CTTATATTCG TAAGGCACTA GAGGACATTC GATTGGATGG AAACCCTATT
AATCTCAGCA AAACTCCTCA AGCATACATG TGTCTACCTC GTCTGCCTGT TGGGAGCCTT
GTCTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu12959
Clone ID Related Accession (Same CDS sequence) NM_004950 , XM_011538007
Accession Version NM_004950.4 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 969bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 15-MAR-2015
Organism Homo sapiens (human)
Product epiphycan precursor
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AC078873.22, AK290642.1 and BQ007792.1. On Feb 21, 2009 this sequence version replaced gi:68800359. ##Evidence-Data-START## Transcript exon combination :: BC030958.1, U59111.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2142853, SAMEA2149398 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: full length.

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
ATGAAGACAT TAGCAGGACT TGTTCTGGGA CTTGTCATCT TTGATGCTGC TGTGACTGCC 
CCAACTCTAG AGTCCATCAA CTATGACTCA GAAACCTATG ATGCCACCTT AGAAGACCTG
GATAATTTGT ACAACTATGA AAACATACCT GTTGATAAAG TTGAGATTGA AATAGCCACA
GTGATGCCTT CAGGGAACAG AGAGCTCCTC ACTCCACCCC CACAGCCTGA GAAGGCCCAG
GAAGAGGAAG AGGAGGAGGA ATCTACTCCC AGGCTGATTG ATGGCTCTTC TCCCCAGGAG
CCTGAATTCA CAGGGGTTCT GGGGCCACAC ACAAATGAAG ACTTTCCAAC CTGTCTTTTG
TGTACTTGTA TAAGTACCAC CGTGTACTGT GATGACCATG AACTTGATGC TATTCCTCCG
CTGCCAAAGA ACACCGCTTA TTTCTATTCC CGCTTTAACA GAATTAAAAA GATCAACAAA
AATGACTTTG CAAGCCTAAG TGATTTAAAA AGGATTGATC TGACATCAAA TTTAATATCT
GAGATTGATG AAGATGCATT CCGAAAACTG CCTCAACTTC GAGAGCTTGT CCTGCGTGAC
AACAAAATAA GGCAGCTCCC AGAATTGCCA ACCACTTTGA CATTTATTGA TATTAGCAAC
AATAGACTTG GAAGGAAAGG GATAAAGCAA GAAGCATTTA AAGACATGTA TGATCTCCAT
CATCTGTACC TCACTGATAA CAACTTGGAC CACATCCCTC TGCCACTCCC AGAAAATCTA
CGAGCCCTTC ACCTCCAGAA TAACAACATT CTGGAAATGC ACGAAGATAC GTTCTGCAAT
GTTAAAAATT TGACTTATAT TCGTAAGGCA CTAGAGGACA TTCGATTGGA TGGAAACCCT
ATTAATCTCA GCAAAACTCC TCAAGCATAC ATGTGTCTAC CTCGTCTGCC TGTTGGGAGC
CTTGTCTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_004941.2
CDS94..1062
Misc Feature(1)88..90(+)
Misc Feature(2)454..528(+)
Misc Feature(3)469..525(+)
Misc Feature(4)523..588(+)
Misc Feature(5)526..597(+)
Misc Feature(6)544..702(+)
Misc Feature(7)592..903(+)
Misc Feature(8)595..660(+)
Misc Feature(9)598..669(+)
Misc Feature(10)619..891(+)
Misc Feature(11)667..732(+)
Misc Feature(12)670..729(+)
Misc Feature(13)724..903(+)
Misc Feature(14)730..807(+)
Misc Feature(15)805..867(+)
Misc Feature(16)808..870(+)
Misc Feature(17)868..933(+)
Misc Feature(18)871..942(+)
Misc Feature(19)943..996(+)
Misc Feature(20)961..1023(+)
Exon (1)1..80
Gene:EPYC
Gene Synonym:
Exon (2)81..258
Gene:EPYC
Gene Synonym:
Exon (3)259..433
Gene:EPYC
Gene Synonym:
Exon (4)434..592
Gene:EPYC
Gene Synonym:
Exon (5)593..795
Gene:EPYC
Gene Synonym:
Exon (6)796..891
Gene:EPYC
Gene Synonym:
Exon (7)892..1539
Gene:EPYC
Gene Synonym:
Translation

Target ORF information:

RefSeq Version NM_004950
Organism Homo sapiens (human)
Definition Homo sapiens epiphycan (EPYC), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_004950

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
ATGAAGACAT TAGCAGGACT TGTTCTGGGA CTTGTCATCT TTGATGCTGC TGTGACTGCC 
CCAACTCTAG AGTCCATCAA CTATGACTCA GAAACCTATG ATGCCACCTT AGAAGACCTG
GATAATTTGT ACAACTATGA AAACATACCT GTTGATAAAG TTGAGATTGA AATAGCCACA
GTGATGCCTT CAGGGAACAG AGAGCTCCTC ACTCCACCCC CACAGCCTGA GAAGGCCCAG
GAAGAGGAAG AGGAGGAGGA ATCTACTCCC AGGCTGATTG ATGGCTCTTC TCCCCAGGAG
CCTGAATTCA CAGGGGTTCT GGGGCCACAC ACAAATGAAG ACTTTCCAAC CTGTCTTTTG
TGTACTTGTA TAAGTACCAC CGTGTACTGT GATGACCATG AACTTGATGC TATTCCTCCG
CTGCCAAAGA ACACCGCTTA TTTCTATTCC CGCTTTAACA GAATTAAAAA GATCAACAAA
AATGACTTTG CAAGCCTAAG TGATTTAAAA AGGATTGATC TGACATCAAA TTTAATATCT
GAGATTGATG AAGATGCATT CCGAAAACTG CCTCAACTTC GAGAGCTTGT CCTGCGTGAC
AACAAAATAA GGCAGCTCCC AGAATTGCCA ACCACTTTGA CATTTATTGA TATTAGCAAC
AATAGACTTG GAAGGAAAGG GATAAAGCAA GAAGCATTTA AAGACATGTA TGATCTCCAT
CATCTGTACC TCACTGATAA CAACTTGGAC CACATCCCTC TGCCACTCCC AGAAAATCTA
CGAGCCCTTC ACCTCCAGAA TAACAACATT CTGGAAATGC ACGAAGATAC GTTCTGCAAT
GTTAAAAATT TGACTTATAT TCGTAAGGCA CTAGAGGACA TTCGATTGGA TGGAAACCCT
ATTAATCTCA GCAAAACTCC TCAAGCATAC ATGTGTCTAC CTCGTCTGCC TGTTGGGAGC
CTTGTCTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

 
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