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FANCC Fanconi anemia, complementation group C [Homo sapiens (human)]

Gene Symbol FANCC
Entrez Gene ID 2176
Full Name Fanconi anemia, complementation group C
Synonyms FA3, FAC, FACC
General protein information
Preferred Names
Fanconi anemia group C protein
Names
Fanconi anemia group C protein
Gene Type protein-coding
Organism Homo sapiens (human)
Genome

9

9q22.3

Summary The Fanconi anemia complementation group (FANC) currently includes FANCA, FANCB, FANCC, FANCD1 (also called BRCA2), FANCD2, FANCE, FANCF, FANCG, FANCI, FANCJ (also called BRIP1), FANCL, FANCM and FANCN (also called PALB2). The previously defined group FANCH is the same as FANCA. Fanconi anemia is a genetically heterogeneous recessive disorder characterized by cytogenetic instability, hypersensitivity to DNA crosslinking agents, increased chromosomal breakage, and defective DNA repair. The members of the Fanconi anemia complementation group do not share sequence similarity; they are related by their assembly into a common nuclear protein complex. This gene encodes the protein for complementation group C. [provided by RefSeq, Jul 2008]. lac of sum
Disorder MIM:

613899

Disorder Html:
CloneID RefSeq Accession Definition **Vector *Turnaround time Price
OHu22897 XM_011518365 PREDICTED: Homo sapiens Fanconi anemia, complementation group C (FANCC), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK In stock 5-7 Starting from $99.00
OHu43075 XM_006717001 PREDICTED: Homo sapiens Fanconi anemia, complementation group C (FANCC), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK Not in stock 7-9 Starting from $99.00
OHu43076 XM_006717002 PREDICTED: Homo sapiens Fanconi anemia, complementation group C (FANCC), transcript variant X3, mRNA. pcDNA3.1-C-(k)DYK Not in stock 7-9 Starting from $99.00
OHu57677 XM_011518366 PREDICTED: Homo sapiens Fanconi anemia, complementation group C (FANCC), transcript variant X4, mRNA. pcDNA3.1-C-(k)DYK Not in stock 7-9 Starting from $99.00
OHu57678 XM_011518367 PREDICTED: Homo sapiens Fanconi anemia, complementation group C (FANCC), transcript variant X5, mRNA. pcDNA3.1-C-(k)DYK In stock 5-7 Starting from $99.00
OHu43078 XM_006717004 PREDICTED: Homo sapiens Fanconi anemia, complementation group C (FANCC), transcript variant X6, mRNA. pcDNA3.1-C-(k)DYK Not in stock 7-9 Starting from $99.00
OHu43079 XM_005251802 PREDICTED: Homo sapiens Fanconi anemia, complementation group C (FANCC), transcript variant X7, mRNA. pcDNA3.1-C-(k)DYK Not in stock 7-9 Starting from $99.00
OHu22897 NM_001243743 Homo sapiens Fanconi anemia, complementation group C (FANCC), transcript variant 2, mRNA. pcDNA3.1-C-(k)DYK In stock 5-7 Starting from $99.00
OHu22897 NM_000136 Homo sapiens Fanconi anemia, complementation group C (FANCC), transcript variant 1, mRNA. pcDNA3.1-C-(k)DYK In stock 5-7 Starting from $99.00
OHu20702 NM_001243744 Homo sapiens Fanconi anemia, complementation group C (FANCC), transcript variant 3, mRNA. pcDNA3.1-C-(k)DYK Not in stock 7-9 Starting from $99.00

*Business Day
**You may select a custom vector to replace pcDNA3.1-C-(k)DYK after clone is added to cart.



CloneID OHu22897D
Sequence Information ORF Nucleotide Sequence (Length: 1677bp)
Protein sequence
SNP
Vector pcDNA3.1-C-(k)DYK or customized vector
Clone information Clone Map
Tag on pcDNA3.1-C-(k)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product Fanconi anemia group C protein isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_008470.20) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
ATGGCTCAAG ATTCAGTAGA TCTTTCTTGT GATTATCAGT TTTGGATGCA GAAGCTTTCT 
GTATGGGATC AGGCTTCCAC TTTGGAAACC CAGCAAGACA CCTGTCTTCA CGTGGCTCAG
TTCCAGGAGT TCCTAAGGAA GATGTATGAA GCCTTGAAAG AGATGGATTC TAATACAGTC
ATTGAAAGAT TCCCCACAAT TGGTCAACTG TTGGCAAAAG CTTGTTGGAA TCCTTTTATT
TTAGCATATG ATGAAAGCCA AAAAATTCTA ATATGGTGCT TATGTTGTCT AATTAACAAA
GAACCACAGA ATTCTGGACA ATCAAAACTT AACTCCTGGA TACAGGGTGT ATTATCTCAT
ATACTTTCAG CACTCAGATT TGATAAAGAA GTTGCTCTTT TCACTCAAGG TCTTGGGTAT
GCACCTATAG ATTACTATCC TGGTTTGCTT AAAAATATGG TTTTATCATT AGCGTCTGAA
CTCAGAGAGA ATCATCTTAA TGGATTTAAC ACTCAAAGGC GAATGGCTCC CGAGCGAGTG
GCGTCCCTGT CACGAGTTTG TGTCCCACTT ATTACCCTGA CAGATGTTGA CCCCCTGGTG
GAGGCTCTCC TCATCTGTCA TGGACGTGAA CCTCAGGAAA TCCTCCAGCC AGAGTTCTTT
GAGGCTGTAA ACGAGGCCAT TTTGCTGAAG AAGATTTCTC TCCCCATGTC AGCTGTAGTC
TGCCTCTGGC TTCGGCACCT TCCCAGCCTT GAAAAAGCAA TGCTGCATCT TTTTGAAAAG
CTAATCTCCA GTGAGAGAAA TTGTCTGAGA AGGATCGAAT GCTTTATAAA AGATTCATCG
CTGCCTCAAG CAGCCTGCCA CCCTGCCATA TTCCGGGTTG TTGATGAGAT GTTCAGGTGT
GCACTCCTGG AAACCGATGG GGCCCTGGAA ATCATAGCCA CTATTCAGGT GTTTACGCAG
TGCTTTGTAG AAGCTCTGGA GAAAGCAAGC AAGCAGCTGC GGTTTGCACT CAAGACCTAC
TTTCCTTACA CTTCTCCATC TCTTGCCATG GTGCTGCTGC AAGACCCTCA AGATATCCCT
CGGGGACACT GGCTCCAGAC ACTGAAGCAT ATTTCTGAAC TGCTCAGAGA AGCAGTTGAA
GACCAGACTC ATGGGTCCTG CGGAGGTCCC TTTGAGAGCT GGTTCCTGTT CATTCACTTC
GGAGGATGGG CTGAGATGGT GGCAGAGCAA TTACTGATGT CGGCAGCCGA ACCCCCCACG
GCCCTGCTGT GGCTCTTGGC CTTCTACTAC GGCCCCCGTG ATGGGAGGCA GCAGAGAGCA
CAGACTATGG TCCAGGTGAA GGCCGTGCTG GGCCACCTCC TGGCAATGTC CAGAAGCAGC
AGCCTCTCAG CCCAGGACCT GCAGACGGTA GCAGGACAGG GCACAGACAC AGACCTCAGA
GCTCCTGCAC AACAGCTGAT CAGGCACCTT CTCCTCAACT TCCTGCTCTG GGCTCCTGGA
GGCCACACGA TCGCCTGGGA TGTCATCACC CTGATGGCTC ACACTGCTGA GATAACTCAC
GAGATCATTG GCTTTCTTGA CCAGACCTTG TACAGATGGA ATCGTCTTGG CATTGAAAGC
CCTAGATCAG AAAAACTGGC CCGAGAGCTC CTTAAAGAGC TGCGAACTCA AGTCTAG
The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.
RefSeqXP_011516667.1
CDS238..1914
Misc Feature(1)238..1911(+)
Translation
Position Chain Variation Link
74 74 a, g dbSNP:576890113
84 84 c, g dbSNP:749131473
95 95 a, g dbSNP:777408536
99 99 c, t dbSNP:553770215
119 119 c, g dbSNP:756142566
131 131 a, t dbSNP:538959445
147 147 g, t dbSNP:571935590
173 173 c, t dbSNP:371725430
195 195 a, g dbSNP:776717328
197 197 a, g dbSNP:768624552
198 198 a, g dbSNP:747181277
199 199 a, g dbSNP:751034596
209 209 a, c dbSNP:4647414
210 210 a, g dbSNP:202029417
213 213 a, c dbSNP:56095406
219 219 c, t dbSNP:772475410
220 220 c, g dbSNP:762660689
226 226 a, g dbSNP:779454514
236 236 a, g dbSNP:773045474
242 242 c, t dbSNP:587780940
243 243 c, t dbSNP:376084231
246 246 a, t dbSNP:769585639
252 252 a, g dbSNP:778408360
254 254 c, t dbSNP:527289778
260 260 c, t dbSNP:752249253
263 263 c, t dbSNP:767124692
265 265 g, t dbSNP:147479204
266 266 a, g dbSNP:143152201
271 271 c, t dbSNP:766173332
272 272 a, g dbSNP:762884109
274 274 c, t dbSNP:121917784
275 275 a, g dbSNP:199968672
279 279 c, t dbSNP:760653185
295 295 a, t dbSNP:775755472
298 298 c, g dbSNP:772386467
299 299 a, t dbSNP:746117016
302 302 a, g dbSNP:377294947
304 304 -, g dbSNP:104886459
309 309 a, g dbSNP:771192104
314 314 c, t dbSNP:1800361
325 325 a, t dbSNP:778115754
327 327 c, t dbSNP:756684704
328 328 c, t dbSNP:747616516
341 341 c, g dbSNP:143212932
343 343 c, g dbSNP:544496341
348 348 c, t dbSNP:751219956
349 349 a, g dbSNP:778951584
361 361 c, t dbSNP:758116389
364 364 a, g dbSNP:374836770
372 372 a, g dbSNP:750281533
374 374 a, g dbSNP:765058606
383 383 a, g dbSNP:761845692
404 404 a, t dbSNP:759662786
413 413 c, t dbSNP:149566909
414 414 a, g dbSNP:111782855
415 415 a, g dbSNP:138629441
417 417 c, g dbSNP:763258312
426 426 a, g dbSNP:773388565
428 428 g, t dbSNP:375921240
434 434 c, t dbSNP:762234072
439 439 c, g dbSNP:777111154
440 440 a, g dbSNP:769200374
446 446 a, g, t dbSNP:150174412
451 451 a, g dbSNP:567465885
458 458 c, g dbSNP:745549619
470 470 a, c dbSNP:138722298
476 476 c, t dbSNP:4647419
485 485 a, g dbSNP:140992397
491 491 a, g dbSNP:774807874
502 502 -, a dbSNP:751757203
504 504 -, t dbSNP:777918411
508 508 a, g dbSNP:771619614
509 509 c, t dbSNP:730881730
511 511 c, t dbSNP:745424828
515 515 a, g dbSNP:774029807
516 516 c, t dbSNP:770743418
530 530 -, ttaa dbSNP:754779102
552 552 c, t dbSNP:749048345
556 556 c, t dbSNP:730881731
566 566 c, t dbSNP:777731560
569 569 a, g dbSNP:756057377
580 580 c, t dbSNP:748118992
585 585 -, t dbSNP:760518436
586 586 a, g dbSNP:781167993
588 588 a, g dbSNP:754914546
592 592 a, tctcat dbSNP:587779904
592 592 -, tctc dbSNP:750003253
593 593 a, c dbSNP:145346409
595 595 a, c dbSNP:140264282
597 597 -, t dbSNP:766909460
599 599 c, t dbSNP:745921537
608 608 a, c, t dbSNP:374602991
620 620 a, g dbSNP:555753798
628 628 a, g dbSNP:543546719
629 629 c, t dbSNP:201621236
630 630 c, t dbSNP:111834377
632 632 c, g dbSNP:587779905
634 634 c, t dbSNP:587779906
642 642 a, t dbSNP:756475781
645 645 a, g dbSNP:1800360
653 653 a, g dbSNP:1800362
654 654 -, g dbSNP:751929181
654 654 g, t dbSNP:190925189
664 664 a, g dbSNP:759387035
666 666 a, g dbSNP:759978888
670 670 c, t dbSNP:751054264
673 673 -, tat dbSNP:761347179
675 675 c, t dbSNP:765990832
677 677 c, t dbSNP:730881711
691 691 a, t dbSNP:772984619
692 692 -, a dbSNP:774170058
697 697 a, g dbSNP:761396597
705 705 a, g dbSNP:148616725
707 707 c, t dbSNP:200828924
709 709 c, g dbSNP:372338418
710 710 c, t dbSNP:776429990
711 711 a, g dbSNP:768342908
724 724 -, gaga dbSNP:730881708
727 727 a, g dbSNP:374366585
731 731 a, g dbSNP:568974136
734 734 g, t dbSNP:768672598
737 737 -, a dbSNP:775982309
746 746 a, g dbSNP:749322338
747 747 c, t dbSNP:777734585
751 751 c, g dbSNP:769998628
753 753 a, g dbSNP:748322179
757 757 c, t dbSNP:781542763
758 758 a, g dbSNP:755283850
763 763 c, g dbSNP:767389988
766 766 c, g, t dbSNP:773272931
768 768 c, t dbSNP:150070473
769 769 a, g dbSNP:554302947
771 771 a, g dbSNP:776694218
772 772 c, t dbSNP:769039987
773 773 a, g dbSNP:538875706
779 779 c, t dbSNP:182879858
780 780 a, g dbSNP:758919360
787 787 a, t dbSNP:41306494
788 788 c, t dbSNP:746367952
790 790 c, t dbSNP:121917783
791 791 a, g, t dbSNP:370346767
793 793 a, g dbSNP:730881713
798 798 c, t dbSNP:763610316
802 802 a, c dbSNP:377620735
805 805 c, t dbSNP:1800364
808 808 a, c dbSNP:752429169
809 809 c, t dbSNP:767302089
812 812 c, t dbSNP:776991402
813 813 c, t dbSNP:759392396
820 820 c, g dbSNP:774140528
821 821 a, t dbSNP:1800365
823 823 g, t dbSNP:761766766
825 825 g, t dbSNP:753923581
830 830 c, g dbSNP:534655551
833 833 c, t dbSNP:143213659
835 835 c, g dbSNP:772996041
846 846 c, t dbSNP:567226063
850 850 a, g dbSNP:747249669
857 857 a, t dbSNP:202038890
859 859 a, g dbSNP:772563185
862 862 c, t dbSNP:373270404
863 863 a, g, t dbSNP:587778327
869 869 c, g, t dbSNP:140781259
879 879 a, c dbSNP:777274497
885 885 a, g dbSNP:755695245
887 887 c, t dbSNP:730881714
889 889 c, g dbSNP:752339229
890 890 a, t dbSNP:780879551
891 891 a, g dbSNP:754705988
905 905 c, t dbSNP:751410815
909 909 c, t dbSNP:150647141
910 910 a, c, g, t dbSNP:374176091
912 912 a, g dbSNP:760906091
915 915 c, t dbSNP:775845203
923 923 g, t dbSNP:369770340
927 927 a, g dbSNP:199744457
929 929 -, aga dbSNP:3831244
932 932 c, t dbSNP:759814183
942 942 c, t dbSNP:141828876
943 943 a, c dbSNP:771319430
944 944 g, t dbSNP:763283053
945 945 a, g dbSNP:587779907
947 947 c, t dbSNP:730881715
949 949 c, g dbSNP:553326913
952 952 a, g dbSNP:773685532
954 954 a, g dbSNP:770324737
962 962 c, t dbSNP:747616510
963 963 c, t dbSNP:776140246
970 970 c, t dbSNP:571548182
979 979 c, t dbSNP:746679714
980 980 c, g dbSNP:779641307
981 981 c, g dbSNP:758201013
982 982 a, g dbSNP:539583288
985 985 a, c dbSNP:778966663
997 997 a, g dbSNP:757294568
1000 1000 c, t dbSNP:752779283
1001 1001 c, t dbSNP:767634640
1004 1004 a, g dbSNP:730881716
1023 1023 c, g dbSNP:751791236
1027 1027 a, g dbSNP:111657009
1029 1029 g, t dbSNP:730881717
1037 1037 a, g dbSNP:200854639
1039 1039 a, t dbSNP:730881718
1042 1042 c, g dbSNP:762322090
1045 1045 a, t dbSNP:776054094
1051 1051 a, g dbSNP:768209355
1053 1053 c, t dbSNP:55719336
1054 1054 a, c, g dbSNP:143181565
1060 1060 c, t dbSNP:745621828
1063 1063 a, g dbSNP:377085045
1065 1065 a, g dbSNP:587779908
1072 1072 a, t dbSNP:757190154
1074 1074 a, g dbSNP:772163673
1076 1076 c, t dbSNP:749230615
1077 1077 a, g dbSNP:34671520
1088 1088 c, t dbSNP:201281511
1097 1097 a, c dbSNP:76486610
1103 1103 c, t dbSNP:777732881
1108 1108 c, t dbSNP:769649289
1112 1112 a, g dbSNP:747060782
1114 1114 a, c, g dbSNP:376044404
1117 1117 a, g dbSNP:758549385
1119 1119 c, t dbSNP:750639831
1125 1125 a, g dbSNP:779166059
1126 1126 a, t dbSNP:730881719
1131 1131 c, g dbSNP:757598256
1134 1134 g, t dbSNP:759083348
1139 1139 a, c dbSNP:553689536
1143 1143 c, g dbSNP:766079351
1152 1152 c, t dbSNP:138132690
1153 1153 -, ga dbSNP:779806106
1153 1153 a, g dbSNP:772992002
1168 1168 a, g dbSNP:764937307
1171 1171 a, g dbSNP:1800366
1172 1172 c, t dbSNP:528168019
1175 1175 c, t dbSNP:730881712
1180 1180 a, g dbSNP:587779910
1183 1183 c, t dbSNP:776529713
1186 1186 a, g dbSNP:768621846
1193 1193 c, t dbSNP:745910444
1204 1204 a, g dbSNP:730881720
1208 1208 a, c dbSNP:774439572
1210 1210 a, g dbSNP:201407189
1211 1211 c, t dbSNP:367618818
1212 1212 g, t dbSNP:747463354
1227 1227 c, g dbSNP:374915316
1229 1229 a, g dbSNP:756408779
1230 1230 a, g dbSNP:748582850
1232 1232 a, c dbSNP:781746980
1234 1234 c, g dbSNP:199746448
1237 1237 c, t dbSNP:140348260
1238 1238 a, g dbSNP:377468919
1239 1239 a, g dbSNP:772717264
1243 1243 g, t dbSNP:78555330
1246 1246 c, g, t dbSNP:587779899
1251 1251 a, g dbSNP:780776360
1252 1252 a, t dbSNP:145497019
1254 1254 c, g dbSNP:754772354
1256 1256 a, g dbSNP:746828156
1257 1257 c, t dbSNP:780089246
1260 1260 g, t dbSNP:758439579
1288 1288 a, g dbSNP:753900426
1294 1294 c, t dbSNP:764280581
1299 1299 a, g dbSNP:756202487
1300 1300 c, g dbSNP:587778325
1303 1303 c, t dbSNP:367924414
1306 1306 c, g, t dbSNP:759900071
1312 1312 a, g dbSNP:763375533
1316 1316 c, t dbSNP:730881721
1318 1318 c, t dbSNP:768508859
1319 1319 a, g, t dbSNP:761336987
1327 1327 c, t dbSNP:771694972
1336 1336 a, g dbSNP:776036681
1341 1341 a, g dbSNP:768286785
1346 1346 a, g dbSNP:760256801
1356 1356 a, g dbSNP:775338179
1371 1371 a, g dbSNP:771986157
1373 1373 c, t dbSNP:745693332
1381 1381 c, g dbSNP:778968824
1383 1383 c, g dbSNP:770809637
1385 1385 c, t dbSNP:534854927
1388 1388 a, g dbSNP:577302082
1389 1389 a, c, t dbSNP:748127093
1393 1393 c, t dbSNP:41281202
1398 1398 c, t dbSNP:548998258
1399 1399 a, g dbSNP:371897078
1406 1406 a, c dbSNP:754293275
1411 1411 c, g dbSNP:764699293
1429 1429 a, g dbSNP:755659975
1431 1431 g, t dbSNP:752274299
1437 1437 c, t dbSNP:767215159
1438 1438 a, g dbSNP:730881722
1439 1439 a, g dbSNP:71498691
1452 1452 g, t dbSNP:774113388
1455 1455 c, g dbSNP:766086120
1475 1475 c, t dbSNP:762847515
1478 1478 c, t dbSNP:200719554
1479 1479 a, g dbSNP:587780939
1481 1481 c, t dbSNP:550462055
1485 1485 c, t dbSNP:747051975
1486 1486 a, g dbSNP:140687953
1490 1490 c, t dbSNP:772223845
1492 1492 -, ccc dbSNP:765551897
1492 1492 c, t dbSNP:746074913
1494 1494 -, c dbSNP:776037287
1496 1496 c, t dbSNP:779261511
1497 1497 a, g, t dbSNP:749709412
1498 1498 a, g dbSNP:780136692
1501 1501 a, c dbSNP:756716463
1512 1512 c, g, t dbSNP:767126985
1518 1518 c, t dbSNP:754604606
1522 1522 a, t dbSNP:751143672
1527 1527 c, t dbSNP:766105286
1534 1534 c, t dbSNP:369684405
1535 1535 a, g dbSNP:768676102
1539 1539 -, t dbSNP:730881709
1542 1542 c, g dbSNP:765092951
1544 1544 a, g dbSNP:201549126
1553 1553 a, g dbSNP:730881723
1564 1564 a, g dbSNP:150941781
1566 1566 a, g dbSNP:772133680
1575 1575 a, g dbSNP:764514171
1581 1581 c, t dbSNP:760983825
1582 1582 a, g dbSNP:1800367
1588 1588 a, g dbSNP:141805918
1589 1589 c, g dbSNP:772474835
1590 1590 c, t dbSNP:745338413
1600 1600 c, g, t dbSNP:730881724
1611 1611 a, c dbSNP:56394801
1616 1616 a, g dbSNP:748938789
1624 1624 -, tc dbSNP:730881710
1631 1631 a, g dbSNP:1800368
1643 1643 c, t dbSNP:149917017
1644 1644 a, g dbSNP:79722116
1646 1646 c, t dbSNP:781144846
1651 1651 a, g dbSNP:201063698
1662 1662 a, g dbSNP:199739450
1674 1674 c, t dbSNP:765396609
1677 1677 a, g dbSNP:757477758
1681 1681 -, cct dbSNP:773270231
1683 1683 c, t dbSNP:754079401
1687 1687 a, c dbSNP:764271678
1693 1693 a, c dbSNP:761050718
1694 1694 c, t dbSNP:753031127
1708 1708 c, g dbSNP:767996832
1716 1716 a, c dbSNP:760046823
1719 1719 c, g dbSNP:200423281
1722 1722 a, c, g dbSNP:56082100
1724 1724 g, t dbSNP:121917785
1726 1726 c, t dbSNP:587779900
1727 1727 c, g dbSNP:762501862
1728 1728 c, g dbSNP:576831650
1730 1730 c, t dbSNP:730881725
1731 1731 c, t dbSNP:76895298
1738 1738 a, g dbSNP:746540247
1739 1739 a, g dbSNP:536599109
1745 1745 c, t dbSNP:779982610
1746 1746 a, g dbSNP:144278080
1749 1749 c, t dbSNP:746940880
1750 1750 a, g dbSNP:780179187
1753 1753 c, t dbSNP:730881726
1761 1761 c, t dbSNP:765766432
1767 1767 c, t dbSNP:372199352
1777 1777 c, t dbSNP:749319183
1781 1781 c, g dbSNP:201379302
1797 1797 c, t dbSNP:150020474
1798 1798 a, g dbSNP:752855423
1799 1799 a, c dbSNP:781445050
1807 1807 a, g dbSNP:755289392
1812 1812 g, t dbSNP:587779901
1822 1822 a, c dbSNP:587778326
1826 1826 c, t dbSNP:766809608
1830 1830 c, t dbSNP:758842354
1831 1831 a, c, g dbSNP:764649916
1832 1832 a, g dbSNP:55939573
1834 1834 g, t dbSNP:730881728
1840 1840 c, t dbSNP:185822330
1841 1841 a, g dbSNP:587779902
1844 1844 c, t dbSNP:587779903
1847 1847 a, g, t dbSNP:775430136
1859 1859 -, c dbSNP:766410371
1860 1860 g, t dbSNP:375362894
1871 1871 a, g dbSNP:571668582
1879 1879 c, t dbSNP:104886457
1880 1880 a, g dbSNP:730881729
1897 1897 c, t dbSNP:769743634
1898 1898 c, t dbSNP:104886458
1900 1900 a, c, t dbSNP:370974124
1901 1901 a, g dbSNP:369636116
1908 1908 a, g dbSNP:780384904
1909 1909 g, t dbSNP:758866109
1912 1912 c, t dbSNP:750866823
1919 1919 c, t dbSNP:117175949
1921 1921 c, t dbSNP:372511678
1922 1922 a, g dbSNP:753428914
1923 1923 c, t dbSNP:370270817
1928 1928 c, t dbSNP:760413505
1929 1929 a, g dbSNP:775336408
1930 1930 c, t dbSNP:767209716
1931 1931 g, t dbSNP:759413874
1938 1938 c, t dbSNP:774109877
1940 1940 c, t dbSNP:770935196
1941 1941 a, g dbSNP:761796772
1943 1943 c, t dbSNP:531605962
1944 1944 a, g dbSNP:375908568
1950 1950 -, t dbSNP:34831009
1950 1950 g, t dbSNP:747229495
1951 1951 a, t dbSNP:76092534
1952 1952 a, t dbSNP:76575945
1952 1952 -, t dbSNP:34760720
1956 1956 a, c, g dbSNP:7029888
1959 1959 c, t dbSNP:763914550
1960 1960 a, g dbSNP:369503655
1961 1961 c, t dbSNP:757786105
1984 1984 a, g dbSNP:369235858
1991 1991 a, g dbSNP:56383909
1995 1995 c, t dbSNP:760573194
1996 1996 a, g dbSNP:529828813
1997 1997 c, t dbSNP:779450392
2010 2010 a, g dbSNP:55687573
2018 2018 c, t dbSNP:540891064
2025 2025 c, t dbSNP:771289098
2030 2030 a, c dbSNP:7048910
2054 2054 a, g dbSNP:558379284
2057 2057 a, g dbSNP:189154697
2071 2071 a, g dbSNP:576156516
2127 2127 g, t dbSNP:184733418
2161 2161 c, t dbSNP:369774588
2164 2164 a, g dbSNP:193261247
2168 2168 a, g dbSNP:773331481
2181 2181 a, g dbSNP:769817519
2261 2261 g, t dbSNP:572523801
2273 2273 a, g dbSNP:4647551
2295 2295 g, t dbSNP:538871646
2308 2308 a, g dbSNP:143389232

Target ORF information:

RefSeq Version XM_011518365
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens Fanconi anemia, complementation group C (FANCC), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1-C-(k)DYK
XM_011518365

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
ATGGCTCAAG ATTCAGTAGA TCTTTCTTGT GATTATCAGT TTTGGATGCA GAAGCTTTCT 
GTATGGGATC AGGCTTCCAC TTTGGAAACC CAGCAAGACA CCTGTCTTCA CGTGGCTCAG
TTCCAGGAGT TCCTAAGGAA GATGTATGAA GCCTTGAAAG AGATGGATTC TAATACAGTC
ATTGAAAGAT TCCCCACAAT TGGTCAACTG TTGGCAAAAG CTTGTTGGAA TCCTTTTATT
TTAGCATATG ATGAAAGCCA AAAAATTCTA ATATGGTGCT TATGTTGTCT AATTAACAAA
GAACCACAGA ATTCTGGACA ATCAAAACTT AACTCCTGGA TACAGGGTGT ATTATCTCAT
ATACTTTCAG CACTCAGATT TGATAAAGAA GTTGCTCTTT TCACTCAAGG TCTTGGGTAT
GCACCTATAG ATTACTATCC TGGTTTGCTT AAAAATATGG TTTTATCATT AGCGTCTGAA
CTCAGAGAGA ATCATCTTAA TGGATTTAAC ACTCAAAGGC GAATGGCTCC CGAGCGAGTG
GCGTCCCTGT CACGAGTTTG TGTCCCACTT ATTACCCTGA CAGATGTTGA CCCCCTGGTG
GAGGCTCTCC TCATCTGTCA TGGACGTGAA CCTCAGGAAA TCCTCCAGCC AGAGTTCTTT
GAGGCTGTAA ACGAGGCCAT TTTGCTGAAG AAGATTTCTC TCCCCATGTC AGCTGTAGTC
TGCCTCTGGC TTCGGCACCT TCCCAGCCTT GAAAAAGCAA TGCTGCATCT TTTTGAAAAG
CTAATCTCCA GTGAGAGAAA TTGTCTGAGA AGGATCGAAT GCTTTATAAA AGATTCATCG
CTGCCTCAAG CAGCCTGCCA CCCTGCCATA TTCCGGGTTG TTGATGAGAT GTTCAGGTGT
GCACTCCTGG AAACCGATGG GGCCCTGGAA ATCATAGCCA CTATTCAGGT GTTTACGCAG
TGCTTTGTAG AAGCTCTGGA GAAAGCAAGC AAGCAGCTGC GGTTTGCACT CAAGACCTAC
TTTCCTTACA CTTCTCCATC TCTTGCCATG GTGCTGCTGC AAGACCCTCA AGATATCCCT
CGGGGACACT GGCTCCAGAC ACTGAAGCAT ATTTCTGAAC TGCTCAGAGA AGCAGTTGAA
GACCAGACTC ATGGGTCCTG CGGAGGTCCC TTTGAGAGCT GGTTCCTGTT CATTCACTTC
GGAGGATGGG CTGAGATGGT GGCAGAGCAA TTACTGATGT CGGCAGCCGA ACCCCCCACG
GCCCTGCTGT GGCTCTTGGC CTTCTACTAC GGCCCCCGTG ATGGGAGGCA GCAGAGAGCA
CAGACTATGG TCCAGGTGAA GGCCGTGCTG GGCCACCTCC TGGCAATGTC CAGAAGCAGC
AGCCTCTCAG CCCAGGACCT GCAGACGGTA GCAGGACAGG GCACAGACAC AGACCTCAGA
GCTCCTGCAC AACAGCTGAT CAGGCACCTT CTCCTCAACT TCCTGCTCTG GGCTCCTGGA
GGCCACACGA TCGCCTGGGA TGTCATCACC CTGATGGCTC ACACTGCTGA GATAACTCAC
GAGATCATTG GCTTTCTTGA CCAGACCTTG TACAGATGGA ATCGTCTTGG CATTGAAAGC
CCTAGATCAG AAAAACTGGC CCGAGAGCTC CTTAAAGAGC TGCGAACTCA AGTCTAG

The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.


CloneID OHu43075D
Sequence Information ORF Nucleotide Sequence (Length: 1512bp)
Protein sequence
SNP
Vector pcDNA3.1-C-(k)DYK or customized vector
Clone information Clone Map
Tag on pcDNA3.1-C-(k)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product Fanconi anemia group C protein isoform X2
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_008470.20) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
ATGGCTCAAG ATTCAGTAGA TCTTTCTTGT GATTATCAGT TTTGGATGCA GAAGCTTTCT 
GTATGGGATC AGGCTTCCAC TTTGGAAACC CAGCAAGACA CCTGTCTTCA CGTGGCTCAG
TTCCAGGAGT TCCTAAGGAA GATGTATGAA GCCTTGAAAG AGATGGATTC TAATACAGTC
ATTGAAAGAT TCCCCACAAT TGGTCAACTG TTGGCAAAAG CTTGTTGGAA TCCTTTTATT
TTAGCATATG ATGAAAGCCA AAAAATTCTA ATATGGTGCT TATGTTGTCT AATTAACAAA
GAACCACAGA ATTCTGGACA ATCAAAACTT AACTCCTGGA TACAGGGTGT ATTATCTCAT
ATACTTTCAG CACTCAGATT TGATAAAGAA GTTGCTCTTT TCACTCAAGG TCTTGGGTAT
GCACCTATAG ATTACTATCC TGGTTTGCTT AAAAATATGG TTTTATCATT AGCGTCTGAA
CTCAGAGAGA ATCATCTTAA TGGATTTAAC ACTCAAAGGC GGAAGAAGAT TTCTCTCCCC
ATGTCAGCTG TAGTCTGCCT CTGGCTTCGG CACCTTCCCA GCCTTGAAAA AGCAATGCTG
CATCTTTTTG AAAAGCTAAT CTCCAGTGAG AGAAATTGTC TGAGAAGGAT CGAATGCTTT
ATAAAAGATT CATCGCTGCC TCAAGCAGCC TGCCACCCTG CCATATTCCG GGTTGTTGAT
GAGATGTTCA GGTGTGCACT CCTGGAAACC GATGGGGCCC TGGAAATCAT AGCCACTATT
CAGGTGTTTA CGCAGTGCTT TGTAGAAGCT CTGGAGAAAG CAAGCAAGCA GCTGCGGTTT
GCACTCAAGA CCTACTTTCC TTACACTTCT CCATCTCTTG CCATGGTGCT GCTGCAAGAC
CCTCAAGATA TCCCTCGGGG ACACTGGCTC CAGACACTGA AGCATATTTC TGAACTGCTC
AGAGAAGCAG TTGAAGACCA GACTCATGGG TCCTGCGGAG GTCCCTTTGA GAGCTGGTTC
CTGTTCATTC ACTTCGGAGG ATGGGCTGAG ATGGTGGCAG AGCAATTACT GATGTCGGCA
GCCGAACCCC CCACGGCCCT GCTGTGGCTC TTGGCCTTCT ACTACGGCCC CCGTGATGGG
AGGCAGCAGA GAGCACAGAC TATGGTCCAG GTGAAGGCCG TGCTGGGCCA CCTCCTGGCA
ATGTCCAGAA GCAGCAGCCT CTCAGCCCAG GACCTGCAGA CGGTAGCAGG ACAGGGCACA
GACACAGACC TCAGAGCTCC TGCACAACAG CTGATCAGGC ACCTTCTCCT CAACTTCCTG
CTCTGGGCTC CTGGAGGCCA CACGATCGCC TGGGATGTCA TCACCCTGAT GGCTCACACT
GCTGAGATAA CTCACGAGAT CATTGGCTTT CTTGACCAGA CCTTGTACAG ATGGAATCGT
CTTGGCATTG AAAGCCCTAG ATCAGAAAAA CTGGCCCGAG AGCTCCTTAA AGAGCTGCGA
ACTCAAGTCTT AG
The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.
RefSeqXP_006717064.1
CDS263..1774
Misc Feature(1)263..1771(+)
Translation
Position Chain Variation Link
19 19 a, g dbSNP:781462178
31 31 -, cg dbSNP:770240845
32 32 -, cg dbSNP:761226120
33 33 -, cg dbSNP:377454563
34 34 -, cg dbSNP:4647349
38 38 c, t dbSNP:182633348
101 101 a, g dbSNP:549245678
108 108 a, c dbSNP:549658720
198 198 c, t dbSNP:371725430
220 220 a, g dbSNP:776717328
222 222 a, g dbSNP:768624552
223 223 a, g dbSNP:747181277
224 224 a, g dbSNP:751034596
234 234 a, c dbSNP:4647414
235 235 a, g dbSNP:202029417
238 238 a, c dbSNP:56095406
244 244 c, t dbSNP:772475410
245 245 c, g dbSNP:762660689
251 251 a, g dbSNP:779454514
261 261 a, g dbSNP:773045474
267 267 c, t dbSNP:587780940
268 268 c, t dbSNP:376084231
271 271 a, t dbSNP:769585639
277 277 a, g dbSNP:778408360
279 279 c, t dbSNP:527289778
285 285 c, t dbSNP:752249253
288 288 c, t dbSNP:767124692
290 290 g, t dbSNP:147479204
291 291 a, g dbSNP:143152201
296 296 c, t dbSNP:766173332
297 297 a, g dbSNP:762884109
299 299 c, t dbSNP:121917784
300 300 a, g dbSNP:199968672
304 304 c, t dbSNP:760653185
320 320 a, t dbSNP:775755472
323 323 c, g dbSNP:772386467
324 324 a, t dbSNP:746117016
327 327 a, g dbSNP:377294947
329 329 -, g dbSNP:104886459
334 334 a, g dbSNP:771192104
339 339 c, t dbSNP:1800361
350 350 a, t dbSNP:778115754
352 352 c, t dbSNP:756684704
353 353 c, t dbSNP:747616516
366 366 c, g dbSNP:143212932
368 368 c, g dbSNP:544496341
373 373 c, t dbSNP:751219956
374 374 a, g dbSNP:778951584
386 386 c, t dbSNP:758116389
389 389 a, g dbSNP:374836770
397 397 a, g dbSNP:750281533
399 399 a, g dbSNP:765058606
408 408 a, g dbSNP:761845692
429 429 a, t dbSNP:759662786
438 438 c, t dbSNP:149566909
439 439 a, g dbSNP:111782855
440 440 a, g dbSNP:138629441
442 442 c, g dbSNP:763258312
451 451 a, g dbSNP:773388565
453 453 g, t dbSNP:375921240
459 459 c, t dbSNP:762234072
464 464 c, g dbSNP:777111154
465 465 a, g dbSNP:769200374
471 471 a, g, t dbSNP:150174412
476 476 a, g dbSNP:567465885
483 483 c, g dbSNP:745549619
495 495 a, c dbSNP:138722298
501 501 c, t dbSNP:4647419
510 510 a, g dbSNP:140992397
516 516 a, g dbSNP:774807874
527 527 -, a dbSNP:751757203
529 529 -, t dbSNP:777918411
533 533 a, g dbSNP:771619614
534 534 c, t dbSNP:730881730
536 536 c, t dbSNP:745424828
540 540 a, g dbSNP:774029807
541 541 c, t dbSNP:770743418
555 555 -, ttaa dbSNP:754779102
577 577 c, t dbSNP:749048345
581 581 c, t dbSNP:730881731
591 591 c, t dbSNP:777731560
594 594 a, g dbSNP:756057377
605 605 c, t dbSNP:748118992
610 610 -, t dbSNP:760518436
611 611 a, g dbSNP:781167993
613 613 a, g dbSNP:754914546
617 617 a, tctcat dbSNP:587779904
617 617 -, tctc dbSNP:750003253
618 618 a, c dbSNP:145346409
620 620 a, c dbSNP:140264282
622 622 -, t dbSNP:766909460
624 624 c, t dbSNP:745921537
633 633 a, c, t dbSNP:374602991
645 645 a, g dbSNP:555753798
653 653 a, g dbSNP:543546719
654 654 c, t dbSNP:201621236
655 655 c, t dbSNP:111834377
657 657 c, g dbSNP:587779905
659 659 c, t dbSNP:587779906
667 667 a, t dbSNP:756475781
670 670 a, g dbSNP:1800360
678 678 a, g dbSNP:1800362
679 679 -, g dbSNP:751929181
679 679 g, t dbSNP:190925189
689 689 a, g dbSNP:759387035
691 691 a, g dbSNP:759978888
695 695 c, t dbSNP:751054264
698 698 -, tat dbSNP:761347179
700 700 c, t dbSNP:765990832
702 702 c, t dbSNP:730881711
716 716 a, t dbSNP:772984619
717 717 -, a dbSNP:774170058
722 722 a, g dbSNP:761396597
730 730 a, g dbSNP:148616725
732 732 c, t dbSNP:200828924
734 734 c, g dbSNP:372338418
735 735 c, t dbSNP:776429990
736 736 a, g dbSNP:768342908
749 749 -, gaga dbSNP:730881708
752 752 a, g dbSNP:374366585
756 756 a, g dbSNP:568974136
759 759 g, t dbSNP:768672598
762 762 -, a dbSNP:775982309
771 771 a, g dbSNP:749322338
772 772 c, t dbSNP:777734585
776 776 c, g dbSNP:769998628
778 778 a, g dbSNP:748322179
782 782 c, t dbSNP:781542763
783 783 a, g dbSNP:755283850
787 787 a, g dbSNP:199744457
789 789 -, aga dbSNP:3831244
792 792 c, t dbSNP:759814183
802 802 c, t dbSNP:141828876
803 803 a, c dbSNP:771319430
804 804 g, t dbSNP:763283053
805 805 a, g dbSNP:587779907
807 807 c, t dbSNP:730881715
809 809 c, g dbSNP:553326913
812 812 a, g dbSNP:773685532
814 814 a, g dbSNP:770324737
822 822 c, t dbSNP:747616510
823 823 c, t dbSNP:776140246
830 830 c, t dbSNP:571548182
839 839 c, t dbSNP:746679714
840 840 c, g dbSNP:779641307
841 841 c, g dbSNP:758201013
842 842 a, g dbSNP:539583288
845 845 a, c dbSNP:778966663
857 857 a, g dbSNP:757294568
860 860 c, t dbSNP:752779283
861 861 c, t dbSNP:767634640
864 864 a, g dbSNP:730881716
883 883 c, g dbSNP:751791236
887 887 a, g dbSNP:111657009
889 889 g, t dbSNP:730881717
897 897 a, g dbSNP:200854639
899 899 a, t dbSNP:730881718
902 902 c, g dbSNP:762322090
905 905 a, t dbSNP:776054094
911 911 a, g dbSNP:768209355
913 913 c, t dbSNP:55719336
914 914 a, c, g dbSNP:143181565
920 920 c, t dbSNP:745621828
923 923 a, g dbSNP:377085045
925 925 a, g dbSNP:587779908
932 932 a, t dbSNP:757190154
934 934 a, g dbSNP:772163673
936 936 c, t dbSNP:749230615
937 937 a, g dbSNP:34671520
948 948 c, t dbSNP:201281511
957 957 a, c dbSNP:76486610
963 963 c, t dbSNP:777732881
968 968 c, t dbSNP:769649289
972 972 a, g dbSNP:747060782
974 974 a, c, g dbSNP:376044404
977 977 a, g dbSNP:758549385
979 979 c, t dbSNP:750639831
985 985 a, g dbSNP:779166059
986 986 a, t dbSNP:730881719
991 991 c, g dbSNP:757598256
994 994 g, t dbSNP:759083348
999 999 a, c dbSNP:553689536
1003 1003 c, g dbSNP:766079351
1012 1012 c, t dbSNP:138132690
1013 1013 -, ga dbSNP:779806106
1013 1013 a, g dbSNP:772992002
1028 1028 a, g dbSNP:764937307
1031 1031 a, g dbSNP:1800366
1032 1032 c, t dbSNP:528168019
1035 1035 c, t dbSNP:730881712
1040 1040 a, g dbSNP:587779910
1043 1043 c, t dbSNP:776529713
1046 1046 a, g dbSNP:768621846
1053 1053 c, t dbSNP:745910444
1064 1064 a, g dbSNP:730881720
1068 1068 a, c dbSNP:774439572
1070 1070 a, g dbSNP:201407189
1071 1071 c, t dbSNP:367618818
1072 1072 g, t dbSNP:747463354
1087 1087 c, g dbSNP:374915316
1089 1089 a, g dbSNP:756408779
1090 1090 a, g dbSNP:748582850
1092 1092 a, c dbSNP:781746980
1094 1094 c, g dbSNP:199746448
1097 1097 c, t dbSNP:140348260
1098 1098 a, g dbSNP:377468919
1099 1099 a, g dbSNP:772717264
1103 1103 g, t dbSNP:78555330
1106 1106 c, g, t dbSNP:587779899
1111 1111 a, g dbSNP:780776360
1112 1112 a, t dbSNP:145497019
1114 1114 c, g dbSNP:754772354
1116 1116 a, g dbSNP:746828156
1117 1117 c, t dbSNP:780089246
1120 1120 g, t dbSNP:758439579
1148 1148 a, g dbSNP:753900426
1154 1154 c, t dbSNP:764280581
1159 1159 a, g dbSNP:756202487
1160 1160 c, g dbSNP:587778325
1163 1163 c, t dbSNP:367924414
1166 1166 c, g, t dbSNP:759900071
1172 1172 a, g dbSNP:763375533
1176 1176 c, t dbSNP:730881721
1178 1178 c, t dbSNP:768508859
1179 1179 a, g, t dbSNP:761336987
1187 1187 c, t dbSNP:771694972
1196 1196 a, g dbSNP:776036681
1201 1201 a, g dbSNP:768286785
1206 1206 a, g dbSNP:760256801
1216 1216 a, g dbSNP:775338179
1231 1231 a, g dbSNP:771986157
1233 1233 c, t dbSNP:745693332
1241 1241 c, g dbSNP:778968824
1243 1243 c, g dbSNP:770809637
1245 1245 c, t dbSNP:534854927
1248 1248 a, g dbSNP:577302082
1249 1249 a, c, t dbSNP:748127093
1253 1253 c, t dbSNP:41281202
1258 1258 c, t dbSNP:548998258
1259 1259 a, g dbSNP:371897078
1266 1266 a, c dbSNP:754293275
1271 1271 c, g dbSNP:764699293
1289 1289 a, g dbSNP:755659975
1291 1291 g, t dbSNP:752274299
1297 1297 c, t dbSNP:767215159
1298 1298 a, g dbSNP:730881722
1299 1299 a, g dbSNP:71498691
1312 1312 g, t dbSNP:774113388
1315 1315 c, g dbSNP:766086120
1335 1335 c, t dbSNP:762847515
1338 1338 c, t dbSNP:200719554
1339 1339 a, g dbSNP:587780939
1341 1341 c, t dbSNP:550462055
1345 1345 c, t dbSNP:747051975
1346 1346 a, g dbSNP:140687953
1350 1350 c, t dbSNP:772223845
1352 1352 -, ccc dbSNP:765551897
1352 1352 c, t dbSNP:746074913
1354 1354 -, c dbSNP:776037287
1356 1356 c, t dbSNP:779261511
1357 1357 a, g, t dbSNP:749709412
1358 1358 a, g dbSNP:780136692
1361 1361 a, c dbSNP:756716463
1372 1372 c, g, t dbSNP:767126985
1378 1378 c, t dbSNP:754604606
1382 1382 a, t dbSNP:751143672
1387 1387 c, t dbSNP:766105286
1394 1394 c, t dbSNP:369684405
1395 1395 a, g dbSNP:768676102
1399 1399 -, t dbSNP:730881709
1402 1402 c, g dbSNP:765092951
1404 1404 a, g dbSNP:201549126
1413 1413 a, g dbSNP:730881723
1424 1424 a, g dbSNP:150941781
1426 1426 a, g dbSNP:772133680
1435 1435 a, g dbSNP:764514171
1441 1441 c, t dbSNP:760983825
1442 1442 a, g dbSNP:1800367
1448 1448 a, g dbSNP:141805918
1449 1449 c, g dbSNP:772474835
1450 1450 c, t dbSNP:745338413
1460 1460 c, g, t dbSNP:730881724
1471 1471 a, c dbSNP:56394801
1476 1476 a, g dbSNP:748938789
1484 1484 -, tc dbSNP:730881710
1491 1491 a, g dbSNP:1800368
1503 1503 c, t dbSNP:149917017
1504 1504 a, g dbSNP:79722116
1506 1506 c, t dbSNP:781144846
1511 1511 a, g dbSNP:201063698
1522 1522 a, g dbSNP:199739450
1534 1534 c, t dbSNP:765396609
1537 1537 a, g dbSNP:757477758
1541 1541 -, cct dbSNP:773270231
1543 1543 c, t dbSNP:754079401
1547 1547 a, c dbSNP:764271678
1553 1553 a, c dbSNP:761050718
1554 1554 c, t dbSNP:753031127
1568 1568 c, g dbSNP:767996832
1576 1576 a, c dbSNP:760046823
1579 1579 c, g dbSNP:200423281
1582 1582 a, c, g dbSNP:56082100
1584 1584 g, t dbSNP:121917785
1586 1586 c, t dbSNP:587779900
1587 1587 c, g dbSNP:762501862
1588 1588 c, g dbSNP:576831650
1590 1590 c, t dbSNP:730881725
1591 1591 c, t dbSNP:76895298
1598 1598 a, g dbSNP:746540247
1599 1599 a, g dbSNP:536599109
1605 1605 c, t dbSNP:779982610
1606 1606 a, g dbSNP:144278080
1609 1609 c, t dbSNP:746940880
1610 1610 a, g dbSNP:780179187
1613 1613 c, t dbSNP:730881726
1621 1621 c, t dbSNP:765766432
1627 1627 c, t dbSNP:372199352
1637 1637 c, t dbSNP:749319183
1641 1641 c, g dbSNP:201379302
1657 1657 c, t dbSNP:150020474
1658 1658 a, g dbSNP:752855423
1659 1659 a, c dbSNP:781445050
1667 1667 a, g dbSNP:755289392
1672 1672 g, t dbSNP:587779901
1682 1682 a, c dbSNP:587778326
1686 1686 c, t dbSNP:766809608
1690 1690 c, t dbSNP:758842354
1691 1691 a, c, g dbSNP:764649916
1692 1692 a, g dbSNP:55939573
1694 1694 g, t dbSNP:730881728
1700 1700 c, t dbSNP:185822330
1701 1701 a, g dbSNP:587779902
1704 1704 c, t dbSNP:587779903
1707 1707 a, g, t dbSNP:775430136
1719 1719 -, c dbSNP:766410371
1720 1720 g, t dbSNP:375362894
1731 1731 a, g dbSNP:571668582
1739 1739 c, t dbSNP:104886457
1740 1740 a, g dbSNP:730881729
1757 1757 c, t dbSNP:769743634
1758 1758 c, t dbSNP:104886458
1760 1760 a, c, t dbSNP:370974124
1761 1761 a, g dbSNP:369636116
1768 1768 a, g dbSNP:780384904
1769 1769 g, t dbSNP:758866109
1772 1772 c, t dbSNP:750866823
1779 1779 c, t dbSNP:117175949
1781 1781 c, t dbSNP:372511678
1782 1782 a, g dbSNP:753428914
1783 1783 c, t dbSNP:370270817
1788 1788 c, t dbSNP:760413505
1789 1789 a, g dbSNP:775336408
1790 1790 c, t dbSNP:767209716
1791 1791 g, t dbSNP:759413874
1798 1798 c, t dbSNP:774109877
1800 1800 c, t dbSNP:770935196
1801 1801 a, g dbSNP:761796772
1803 1803 c, t dbSNP:531605962
1804 1804 a, g dbSNP:375908568
1810 1810 -, t dbSNP:34831009
1810 1810 g, t dbSNP:747229495
1811 1811 a, t dbSNP:76092534
1812 1812 a, t dbSNP:76575945
1812 1812 -, t dbSNP:34760720
1816 1816 a, c, g dbSNP:7029888
1819 1819 c, t dbSNP:763914550
1820 1820 a, g dbSNP:369503655
1821 1821 c, t dbSNP:757786105
1844 1844 a, g dbSNP:369235858
1851 1851 a, g dbSNP:56383909
1855 1855 c, t dbSNP:760573194
1856 1856 a, g dbSNP:529828813
1857 1857 c, t dbSNP:779450392
1870 1870 a, g dbSNP:55687573
1878 1878 c, t dbSNP:540891064
1885 1885 c, t dbSNP:771289098
1890 1890 a, c dbSNP:7048910
1914 1914 a, g dbSNP:558379284
1917 1917 a, g dbSNP:189154697
1931 1931 a, g dbSNP:576156516
1987 1987 g, t dbSNP:184733418
2021 2021 c, t dbSNP:369774588
2024 2024 a, g dbSNP:193261247
2028 2028 a, g dbSNP:773331481
2041 2041 a, g dbSNP:769817519
2121 2121 g, t dbSNP:572523801
2133 2133 a, g dbSNP:4647551
2155 2155 g, t dbSNP:538871646
2168 2168 a, g dbSNP:143389232

Target ORF information:

RefSeq Version XM_006717001
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens Fanconi anemia, complementation group C (FANCC), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1-C-(k)DYK
XM_006717001

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
ATGGCTCAAG ATTCAGTAGA TCTTTCTTGT GATTATCAGT TTTGGATGCA GAAGCTTTCT 
GTATGGGATC AGGCTTCCAC TTTGGAAACC CAGCAAGACA CCTGTCTTCA CGTGGCTCAG
TTCCAGGAGT TCCTAAGGAA GATGTATGAA GCCTTGAAAG AGATGGATTC TAATACAGTC
ATTGAAAGAT TCCCCACAAT TGGTCAACTG TTGGCAAAAG CTTGTTGGAA TCCTTTTATT
TTAGCATATG ATGAAAGCCA AAAAATTCTA ATATGGTGCT TATGTTGTCT AATTAACAAA
GAACCACAGA ATTCTGGACA ATCAAAACTT AACTCCTGGA TACAGGGTGT ATTATCTCAT
ATACTTTCAG CACTCAGATT TGATAAAGAA GTTGCTCTTT TCACTCAAGG TCTTGGGTAT
GCACCTATAG ATTACTATCC TGGTTTGCTT AAAAATATGG TTTTATCATT AGCGTCTGAA
CTCAGAGAGA ATCATCTTAA TGGATTTAAC ACTCAAAGGC GGAAGAAGAT TTCTCTCCCC
ATGTCAGCTG TAGTCTGCCT CTGGCTTCGG CACCTTCCCA GCCTTGAAAA AGCAATGCTG
CATCTTTTTG AAAAGCTAAT CTCCAGTGAG AGAAATTGTC TGAGAAGGAT CGAATGCTTT
ATAAAAGATT CATCGCTGCC TCAAGCAGCC TGCCACCCTG CCATATTCCG GGTTGTTGAT
GAGATGTTCA GGTGTGCACT CCTGGAAACC GATGGGGCCC TGGAAATCAT AGCCACTATT
CAGGTGTTTA CGCAGTGCTT TGTAGAAGCT CTGGAGAAAG CAAGCAAGCA GCTGCGGTTT
GCACTCAAGA CCTACTTTCC TTACACTTCT CCATCTCTTG CCATGGTGCT GCTGCAAGAC
CCTCAAGATA TCCCTCGGGG ACACTGGCTC CAGACACTGA AGCATATTTC TGAACTGCTC
AGAGAAGCAG TTGAAGACCA GACTCATGGG TCCTGCGGAG GTCCCTTTGA GAGCTGGTTC
CTGTTCATTC ACTTCGGAGG ATGGGCTGAG ATGGTGGCAG AGCAATTACT GATGTCGGCA
GCCGAACCCC CCACGGCCCT GCTGTGGCTC TTGGCCTTCT ACTACGGCCC CCGTGATGGG
AGGCAGCAGA GAGCACAGAC TATGGTCCAG GTGAAGGCCG TGCTGGGCCA CCTCCTGGCA
ATGTCCAGAA GCAGCAGCCT CTCAGCCCAG GACCTGCAGA CGGTAGCAGG ACAGGGCACA
GACACAGACC TCAGAGCTCC TGCACAACAG CTGATCAGGC ACCTTCTCCT CAACTTCCTG
CTCTGGGCTC CTGGAGGCCA CACGATCGCC TGGGATGTCA TCACCCTGAT GGCTCACACT
GCTGAGATAA CTCACGAGAT CATTGGCTTT CTTGACCAGA CCTTGTACAG ATGGAATCGT
CTTGGCATTG AAAGCCCTAG ATCAGAAAAA CTGGCCCGAG AGCTCCTTAA AGAGCTGCGA
ACTCAAGTCTT AG

The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.


CloneID OHu43076D
Sequence Information ORF Nucleotide Sequence (Length: 1365bp)
Protein sequence
SNP
Vector pcDNA3.1-C-(k)DYK or customized vector
Clone information Clone Map
Tag on pcDNA3.1-C-(k)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product Fanconi anemia group C protein isoform X3
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_008470.20) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 12, 2015 this sequence version replaced gi:578817177. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
ATGGCTCAAG ATTCAGTAGA TCTTTCTTGT GATTATCAGT TTTGGATGCA GAAGCTTTCT 
GTATGGGATC AGGCTTCCAC TTTGGAAACC CAGCAAGACA CCTGTCTTCA CGTGGCTCAG
TTCCAGGAGT TCCTAAGGAA GATGTATGAA GCCTTGAAAG AGATGGATTC TAATACAGTC
ATTGAAAGAT TCCCCACAAT TGGTCAACTG TTGGCAAAAG CTTGTTGGAA TCCTTTTATT
TTAGCATATG ATGAAAGCCA AAAAATTCTA ATATGGTGCT TATGTTGTCT AATTAACAAA
GAACCACAGA ATTCTGGACA ATCAAAACTT AACTCCTGGA TACAGGGTGT ATTATCTCAT
ATACTTTCAG CACTCAGATT TGATAAAGAA GTTGCTCTTT TCACTCAAGG TCTTGGGTAT
GCACCTATAG ATTACTATCC TGGTTTGCTT AAAAATATGG TTTTATCATT AGCGTCTGAA
CTCAGAGAGA ATCATCTTAA TGGATTTAAC ACTCAAAGGC GAATGGCTCC CGAGCGAGTG
GCGTCCCTGT CACGAGTTTG TGTCCCACTT ATTACCCTGA CAGATGTTGA CCCCCTGGTG
GAGGCTCTCC TCATCTGTCA TGGACGTGAA CCTCAGGAAA TCCTCCAGCC AGAGTTCTTT
GAGGCTGTAA ACGAGGCCAT TTTGCTGAAG AAGATTTCTC TCCCCATGTC AGCTGTAGTC
TGCCTCTGGC TTCGGCACCT TCCCAGCCTT GAAAAAGCAA TGCTGCATCT TTTTGAAAAG
CTAATCTCCA GTGAGAGAAA TTGTCTGAGA AGGATCGAAT GCTTTATAAA AGATTCATCG
CTGCCTCAAG CAGCCTGCCA CCCTGCCATA TTCCGGGTTG TTGATGAGAT GTTCAGGTGT
GCACTCCTGG AAACCGATGG GGCCCTGGAA ATCATAGCCA CTATTCAGGT GTTTACGCAG
TGCTTTGTAG AAGCTCTGGA GAAAGCAAGC AAGCAGCTGC GGTTTGCACT CAAGACCTAC
TTTCCTTACA CTTCTCCATC TCTTGCCATG GTGCTGCTGC AAGACCCTCA AGATATCCCT
CGGGGACACT GGCTCCAGAC ACTGAAGCAT ATTTCTGAAC TGCTCAGAGA AGCAGTTGAA
GACCAGACTC ATGGGTCCTG CGGAGGTCCC TTTGAGAGCT GGTTCCTGTT CATTCACTTC
GGAGGATGGG CTGAGATGGT GGCAGAGCAA TTACTGATGT CGGCAGCCGA ACCCCCCACG
GCCCTGCTGT GGCTCTTGGC CTTCTACTAC GGCCCCCGTG ATGGGAGGCA GCAGAGAGCA
CAGACTATGG TCAGTTCCTG GCATGGTGCC CTGACTGCTT GGTGA
The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.
RefSeqXP_006717065.1
CDS263..1627
Misc Feature(1)263..>1600(+)
Translation
Position Chain Variation Link
19 19 a, g dbSNP:781462178
31 31 -, cg dbSNP:770240845
32 32 -, cg dbSNP:761226120
33 33 -, cg dbSNP:377454563
34 34 -, cg dbSNP:4647349
38 38 c, t dbSNP:182633348
101 101 a, g dbSNP:549245678
108 108 a, c dbSNP:549658720
198 198 c, t dbSNP:371725430
220 220 a, g dbSNP:776717328
222 222 a, g dbSNP:768624552
223 223 a, g dbSNP:747181277
224 224 a, g dbSNP:751034596
234 234 a, c dbSNP:4647414
235 235 a, g dbSNP:202029417
238 238 a, c dbSNP:56095406
244 244 c, t dbSNP:772475410
245 245 c, g dbSNP:762660689
251 251 a, g dbSNP:779454514
261 261 a, g dbSNP:773045474
267 267 c, t dbSNP:587780940
268 268 c, t dbSNP:376084231
271 271 a, t dbSNP:769585639
277 277 a, g dbSNP:778408360
279 279 c, t dbSNP:527289778
285 285 c, t dbSNP:752249253
288 288 c, t dbSNP:767124692
290 290 g, t dbSNP:147479204
291 291 a, g dbSNP:143152201
296 296 c, t dbSNP:766173332
297 297 a, g dbSNP:762884109
299 299 c, t dbSNP:121917784
300 300 a, g dbSNP:199968672
304 304 c, t dbSNP:760653185
320 320 a, t dbSNP:775755472
323 323 c, g dbSNP:772386467
324 324 a, t dbSNP:746117016
327 327 a, g dbSNP:377294947
329 329 -, g dbSNP:104886459
334 334 a, g dbSNP:771192104
339 339 c, t dbSNP:1800361
350 350 a, t dbSNP:778115754
352 352 c, t dbSNP:756684704
353 353 c, t dbSNP:747616516
366 366 c, g dbSNP:143212932
368 368 c, g dbSNP:544496341
373 373 c, t dbSNP:751219956
374 374 a, g dbSNP:778951584
386 386 c, t dbSNP:758116389
389 389 a, g dbSNP:374836770
397 397 a, g dbSNP:750281533
399 399 a, g dbSNP:765058606
408 408 a, g dbSNP:761845692
429 429 a, t dbSNP:759662786
438 438 c, t dbSNP:149566909
439 439 a, g dbSNP:111782855
440 440 a, g dbSNP:138629441
442 442 c, g dbSNP:763258312
451 451 a, g dbSNP:773388565
453 453 g, t dbSNP:375921240
459 459 c, t dbSNP:762234072
464 464 c, g dbSNP:777111154
465 465 a, g dbSNP:769200374
471 471 a, g, t dbSNP:150174412
476 476 a, g dbSNP:567465885
483 483 c, g dbSNP:745549619
495 495 a, c dbSNP:138722298
501 501 c, t dbSNP:4647419
510 510 a, g dbSNP:140992397
516 516 a, g dbSNP:774807874
527 527 -, a dbSNP:751757203
529 529 -, t dbSNP:777918411
533 533 a, g dbSNP:771619614
534 534 c, t dbSNP:730881730
536 536 c, t dbSNP:745424828
540 540 a, g dbSNP:774029807
541 541 c, t dbSNP:770743418
555 555 -, ttaa dbSNP:754779102
577 577 c, t dbSNP:749048345
581 581 c, t dbSNP:730881731
591 591 c, t dbSNP:777731560
594 594 a, g dbSNP:756057377
605 605 c, t dbSNP:748118992
610 610 -, t dbSNP:760518436
611 611 a, g dbSNP:781167993
613 613 a, g dbSNP:754914546
617 617 a, tctcat dbSNP:587779904
617 617 -, tctc dbSNP:750003253
618 618 a, c dbSNP:145346409
620 620 a, c dbSNP:140264282
622 622 -, t dbSNP:766909460
624 624 c, t dbSNP:745921537
633 633 a, c, t dbSNP:374602991
645 645 a, g dbSNP:555753798
653 653 a, g dbSNP:543546719
654 654 c, t dbSNP:201621236
655 655 c, t dbSNP:111834377
657 657 c, g dbSNP:587779905
659 659 c, t dbSNP:587779906
667 667 a, t dbSNP:756475781
670 670 a, g dbSNP:1800360
678 678 a, g dbSNP:1800362
679 679 -, g dbSNP:751929181
679 679 g, t dbSNP:190925189
689 689 a, g dbSNP:759387035
691 691 a, g dbSNP:759978888
695 695 c, t dbSNP:751054264
698 698 -, tat dbSNP:761347179
700 700 c, t dbSNP:765990832
702 702 c, t dbSNP:730881711
716 716 a, t dbSNP:772984619
717 717 -, a dbSNP:774170058
722 722 a, g dbSNP:761396597
730 730 a, g dbSNP:148616725
732 732 c, t dbSNP:200828924
734 734 c, g dbSNP:372338418
735 735 c, t dbSNP:776429990
736 736 a, g dbSNP:768342908
749 749 -, gaga dbSNP:730881708
752 752 a, g dbSNP:374366585
756 756 a, g dbSNP:568974136
759 759 g, t dbSNP:768672598
762 762 -, a dbSNP:775982309
771 771 a, g dbSNP:749322338
772 772 c, t dbSNP:777734585
776 776 c, g dbSNP:769998628
778 778 a, g dbSNP:748322179
782 782 c, t dbSNP:781542763
783 783 a, g dbSNP:755283850
788 788 c, g dbSNP:767389988
791 791 c, g, t dbSNP:773272931
793 793 c, t dbSNP:150070473
794 794 a, g dbSNP:554302947
796 796 a, g dbSNP:776694218
797 797 c, t dbSNP:769039987
798 798 a, g dbSNP:538875706
804 804 c, t dbSNP:182879858
805 805 a, g dbSNP:758919360
812 812 a, t dbSNP:41306494
813 813 c, t dbSNP:746367952
815 815 c, t dbSNP:121917783
816 816 a, g, t dbSNP:370346767
818 818 a, g dbSNP:730881713
823 823 c, t dbSNP:763610316
827 827 a, c dbSNP:377620735
830 830 c, t dbSNP:1800364
833 833 a, c dbSNP:752429169
834 834 c, t dbSNP:767302089
837 837 c, t dbSNP:776991402
838 838 c, t dbSNP:759392396
845 845 c, g dbSNP:774140528
846 846 a, t dbSNP:1800365
848 848 g, t dbSNP:761766766
850 850 g, t dbSNP:753923581
855 855 c, g dbSNP:534655551
858 858 c, t dbSNP:143213659
860 860 c, g dbSNP:772996041
871 871 c, t dbSNP:567226063
875 875 a, g dbSNP:747249669
882 882 a, t dbSNP:202038890
884 884 a, g dbSNP:772563185
887 887 c, t dbSNP:373270404
888 888 a, g, t dbSNP:587778327
894 894 c, g, t dbSNP:140781259
904 904 a, c dbSNP:777274497
910 910 a, g dbSNP:755695245
912 912 c, t dbSNP:730881714
914 914 c, g dbSNP:752339229
915 915 a, t dbSNP:780879551
916 916 a, g dbSNP:754705988
930 930 c, t dbSNP:751410815
934 934 c, t dbSNP:150647141
935 935 a, c, g, t dbSNP:374176091
937 937 a, g dbSNP:760906091
940 940 c, t dbSNP:775845203
948 948 g, t dbSNP:369770340
952 952 a, g dbSNP:199744457
954 954 -, aga dbSNP:3831244
957 957 c, t dbSNP:759814183
967 967 c, t dbSNP:141828876
968 968 a, c dbSNP:771319430
969 969 g, t dbSNP:763283053
970 970 a, g dbSNP:587779907
972 972 c, t dbSNP:730881715
974 974 c, g dbSNP:553326913
977 977 a, g dbSNP:773685532
979 979 a, g dbSNP:770324737
987 987 c, t dbSNP:747616510
988 988 c, t dbSNP:776140246
995 995 c, t dbSNP:571548182
1004 1004 c, t dbSNP:746679714
1005 1005 c, g dbSNP:779641307
1006 1006 c, g dbSNP:758201013
1007 1007 a, g dbSNP:539583288
1010 1010 a, c dbSNP:778966663
1022 1022 a, g dbSNP:757294568
1025 1025 c, t dbSNP:752779283
1026 1026 c, t dbSNP:767634640
1029 1029 a, g dbSNP:730881716
1048 1048 c, g dbSNP:751791236
1052 1052 a, g dbSNP:111657009
1054 1054 g, t dbSNP:730881717
1062 1062 a, g dbSNP:200854639
1064 1064 a, t dbSNP:730881718
1067 1067 c, g dbSNP:762322090
1070 1070 a, t dbSNP:776054094
1076 1076 a, g dbSNP:768209355
1078 1078 c, t dbSNP:55719336
1079 1079 a, c, g dbSNP:143181565
1085 1085 c, t dbSNP:745621828
1088 1088 a, g dbSNP:377085045
1090 1090 a, g dbSNP:587779908
1097 1097 a, t dbSNP:757190154
1099 1099 a, g dbSNP:772163673
1101 1101 c, t dbSNP:749230615
1102 1102 a, g dbSNP:34671520
1113 1113 c, t dbSNP:201281511
1122 1122 a, c dbSNP:76486610
1128 1128 c, t dbSNP:777732881
1133 1133 c, t dbSNP:769649289
1137 1137 a, g dbSNP:747060782
1139 1139 a, c, g dbSNP:376044404
1142 1142 a, g dbSNP:758549385
1144 1144 c, t dbSNP:750639831
1150 1150 a, g dbSNP:779166059
1151 1151 a, t dbSNP:730881719
1156 1156 c, g dbSNP:757598256
1159 1159 g, t dbSNP:759083348
1164 1164 a, c dbSNP:553689536
1168 1168 c, g dbSNP:766079351
1177 1177 c, t dbSNP:138132690
1178 1178 -, ga dbSNP:779806106
1178 1178 a, g dbSNP:772992002
1193 1193 a, g dbSNP:764937307
1196 1196 a, g dbSNP:1800366
1197 1197 c, t dbSNP:528168019
1200 1200 c, t dbSNP:730881712
1205 1205 a, g dbSNP:587779910
1208 1208 c, t dbSNP:776529713
1211 1211 a, g dbSNP:768621846
1218 1218 c, t dbSNP:745910444
1229 1229 a, g dbSNP:730881720
1233 1233 a, c dbSNP:774439572
1235 1235 a, g dbSNP:201407189
1236 1236 c, t dbSNP:367618818
1237 1237 g, t dbSNP:747463354
1252 1252 c, g dbSNP:374915316
1254 1254 a, g dbSNP:756408779
1255 1255 a, g dbSNP:748582850
1257 1257 a, c dbSNP:781746980
1259 1259 c, g dbSNP:199746448
1262 1262 c, t dbSNP:140348260
1263 1263 a, g dbSNP:377468919
1264 1264 a, g dbSNP:772717264
1268 1268 g, t dbSNP:78555330
1271 1271 c, g, t dbSNP:587779899
1276 1276 a, g dbSNP:780776360
1277 1277 a, t dbSNP:145497019
1279 1279 c, g dbSNP:754772354
1281 1281 a, g dbSNP:746828156
1282 1282 c, t dbSNP:780089246
1285 1285 g, t dbSNP:758439579
1313 1313 a, g dbSNP:753900426
1319 1319 c, t dbSNP:764280581
1324 1324 a, g dbSNP:756202487
1325 1325 c, g dbSNP:587778325
1328 1328 c, t dbSNP:367924414
1331 1331 c, g, t dbSNP:759900071
1337 1337 a, g dbSNP:763375533
1341 1341 c, t dbSNP:730881721
1343 1343 c, t dbSNP:768508859
1344 1344 a, g, t dbSNP:761336987
1352 1352 c, t dbSNP:771694972
1361 1361 a, g dbSNP:776036681
1366 1366 a, g dbSNP:768286785
1371 1371 a, g dbSNP:760256801
1381 1381 a, g dbSNP:775338179
1396 1396 a, g dbSNP:771986157
1398 1398 c, t dbSNP:745693332
1406 1406 c, g dbSNP:778968824
1408 1408 c, g dbSNP:770809637
1410 1410 c, t dbSNP:534854927
1413 1413 a, g dbSNP:577302082
1414 1414 a, c, t dbSNP:748127093
1418 1418 c, t dbSNP:41281202
1423 1423 c, t dbSNP:548998258
1424 1424 a, g dbSNP:371897078
1431 1431 a, c dbSNP:754293275
1436 1436 c, g dbSNP:764699293
1454 1454 a, g dbSNP:755659975
1456 1456 g, t dbSNP:752274299
1462 1462 c, t dbSNP:767215159
1463 1463 a, g dbSNP:730881722
1464 1464 a, g dbSNP:71498691
1477 1477 g, t dbSNP:774113388
1480 1480 c, g dbSNP:766086120
1500 1500 c, t dbSNP:762847515
1503 1503 c, t dbSNP:200719554
1504 1504 a, g dbSNP:587780939
1506 1506 c, t dbSNP:550462055
1510 1510 c, t dbSNP:747051975
1511 1511 a, g dbSNP:140687953
1515 1515 c, t dbSNP:772223845
1517 1517 -, ccc dbSNP:765551897
1517 1517 c, t dbSNP:746074913
1519 1519 -, c dbSNP:776037287
1521 1521 c, t dbSNP:779261511
1522 1522 a, g, t dbSNP:749709412
1523 1523 a, g dbSNP:780136692
1526 1526 a, c dbSNP:756716463
1537 1537 c, g, t dbSNP:767126985
1543 1543 c, t dbSNP:754604606
1547 1547 a, t dbSNP:751143672
1552 1552 c, t dbSNP:766105286
1559 1559 c, t dbSNP:369684405
1560 1560 a, g dbSNP:768676102
1564 1564 -, t dbSNP:730881709
1567 1567 c, g dbSNP:765092951
1569 1569 a, g dbSNP:201549126
1578 1578 a, g dbSNP:730881723
1589 1589 a, g dbSNP:150941781
1591 1591 a, g dbSNP:772133680
1604 1604 c, t dbSNP:574293285
1629 1629 c, t dbSNP:552644905
1635 1635 a, g dbSNP:183031140
1636 1636 a, c dbSNP:570095741
1638 1638 a, g dbSNP:41313869
1642 1642 a, g dbSNP:113078407
1662 1662 a, g dbSNP:551860710
1686 1686 a, g dbSNP:377575774
1690 1690 a, g dbSNP:547012831
1695 1695 c, t dbSNP:2282216
1698 1698 a, g dbSNP:548869225
1701 1701 c, t dbSNP:774794563
1702 1702 a, g dbSNP:766812326
1740 1740 a, g dbSNP:763312565
1747 1747 a, g dbSNP:530313777
1756 1756 a, t dbSNP:560030208
1757 1757 c, t dbSNP:547897246
1775 1775 c, g dbSNP:541099695
1785 1785 a, t dbSNP:755932146

Target ORF information:

RefSeq Version XM_006717002
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens Fanconi anemia, complementation group C (FANCC), transcript variant X3, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1-C-(k)DYK
XM_006717002

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
ATGGCTCAAG ATTCAGTAGA TCTTTCTTGT GATTATCAGT TTTGGATGCA GAAGCTTTCT 
GTATGGGATC AGGCTTCCAC TTTGGAAACC CAGCAAGACA CCTGTCTTCA CGTGGCTCAG
TTCCAGGAGT TCCTAAGGAA GATGTATGAA GCCTTGAAAG AGATGGATTC TAATACAGTC
ATTGAAAGAT TCCCCACAAT TGGTCAACTG TTGGCAAAAG CTTGTTGGAA TCCTTTTATT
TTAGCATATG ATGAAAGCCA AAAAATTCTA ATATGGTGCT TATGTTGTCT AATTAACAAA
GAACCACAGA ATTCTGGACA ATCAAAACTT AACTCCTGGA TACAGGGTGT ATTATCTCAT
ATACTTTCAG CACTCAGATT TGATAAAGAA GTTGCTCTTT TCACTCAAGG TCTTGGGTAT
GCACCTATAG ATTACTATCC TGGTTTGCTT AAAAATATGG TTTTATCATT AGCGTCTGAA
CTCAGAGAGA ATCATCTTAA TGGATTTAAC ACTCAAAGGC GAATGGCTCC CGAGCGAGTG
GCGTCCCTGT CACGAGTTTG TGTCCCACTT ATTACCCTGA CAGATGTTGA CCCCCTGGTG
GAGGCTCTCC TCATCTGTCA TGGACGTGAA CCTCAGGAAA TCCTCCAGCC AGAGTTCTTT
GAGGCTGTAA ACGAGGCCAT TTTGCTGAAG AAGATTTCTC TCCCCATGTC AGCTGTAGTC
TGCCTCTGGC TTCGGCACCT TCCCAGCCTT GAAAAAGCAA TGCTGCATCT TTTTGAAAAG
CTAATCTCCA GTGAGAGAAA TTGTCTGAGA AGGATCGAAT GCTTTATAAA AGATTCATCG
CTGCCTCAAG CAGCCTGCCA CCCTGCCATA TTCCGGGTTG TTGATGAGAT GTTCAGGTGT
GCACTCCTGG AAACCGATGG GGCCCTGGAA ATCATAGCCA CTATTCAGGT GTTTACGCAG
TGCTTTGTAG AAGCTCTGGA GAAAGCAAGC AAGCAGCTGC GGTTTGCACT CAAGACCTAC
TTTCCTTACA CTTCTCCATC TCTTGCCATG GTGCTGCTGC AAGACCCTCA AGATATCCCT
CGGGGACACT GGCTCCAGAC ACTGAAGCAT ATTTCTGAAC TGCTCAGAGA AGCAGTTGAA
GACCAGACTC ATGGGTCCTG CGGAGGTCCC TTTGAGAGCT GGTTCCTGTT CATTCACTTC
GGAGGATGGG CTGAGATGGT GGCAGAGCAA TTACTGATGT CGGCAGCCGA ACCCCCCACG
GCCCTGCTGT GGCTCTTGGC CTTCTACTAC GGCCCCCGTG ATGGGAGGCA GCAGAGAGCA
CAGACTATGG TCAGTTCCTG GCATGGTGCC CTGACTGCTT GGTGA

The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.


CloneID OHu57677D
Sequence Information ORF Nucleotide Sequence (Length: 1338bp)
Protein sequence
SNP
Vector pcDNA3.1-C-(k)DYK or customized vector
Clone information Clone Map
Tag on pcDNA3.1-C-(k)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product Fanconi anemia group C protein isoform X4
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_008470.20) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
ATGGCTCAAG ATTCAGTAGA TCTTTCTTGT GATTATCAGT TTTGGATGCA GAAGCTTTCT 
GTATGGGATC AGGCTTCCAC TTTGGAAACC CAGCAAGACA CCTGTCTTCA CGTGGCTCAG
TTCCAGGAGT TCCTAAGGAA GATGTATGAA GCCTTGAAAG AGATGGATTC TAATACAGTC
ATTGAAAGAT TCCCCACAAT TGGTCAACTG TTGGCAAAAG CTTGTTGGAA TCCTTTTATT
TTAGCATATG ATGAAAGCCA AAAAATTCTA ATATGGTGCT TATGTTGTCT AATTAACAAA
GAACCACAGA ATTCTGGACA ATCAAAACTT AACTCCTGGA TACAGGGTGT ATTATCTCAT
ATACTTTCAG CACTCAGATT TGATAAAGAA GTTGCTCTTT TCACTCAAGG TCTTGGGTAT
GCACCTATAG ATTACTATCC TGGTTTGCTT AAAAATATGG TTTTATCATT AGCGTCTGAA
CTCAGAGAGA ATCATCTTAA TGGATTTAAC ACTCAAAGGC GAATGGCTCC CGAGCGAGTG
GCGTCCCTGT CACGAGTTTG TGTCCCACTT ATTACCCTGA CAGATGTTGA CCCCCTGGTG
GAGGCTCTCC TCATCTGTCA TGGACGTGAA CCTCAGGAAA TCCTCCAGCC AGAGTTCTTT
GAGGCTGTAA ACGAGGCCAT TTTGCTGAAG AAGATTTCTC TCCCCATGTC AGCTGTAGTC
TGCCTCTGGC TTCGGCACCT TCCCAGCCTT GAAAAAGCAA TGCTGCATCT TTTTGAAAAG
CTAATCTCCA GTGAGAGAAA TTGTCTGAGA AGGATCGAAT GCTTTATAAA AGATTCATCG
CTGCCTCAAG CAGCCTGCCA CCCTGCCATA TTCCGGGTTG TTGATGAGAT GTTCAGGTGT
GCACTCCTGG AAACCGATGG GGCCCTGGAA ATCATAGCCA CTATTCAGGT GTTTACGCAG
TGCTTTGTAG AAGCTCTGGA GAAAGCAAGC AAGCAGCTGC GGTTTGCACT CAAGACCTAC
TTTCCTTACA CTTCTCCATC TCTTGCCATG GTGCTGCTGC AAGACCCTCA AGATATCCCT
CGGGGACACT GGCTCCAGAC ACTGAAGCAT ATTTCTGAAC TGCTCAGAGA AGCAGTTGAA
GACCAGACTC ATGGGTCCTG CGGAGGTCCC TTTGAGAGCT GGTTCCTGTT CATTCACTTC
GGAGGATGGG CTGAGATGGT GGCAGAGCAA TTACTGATGT CGGCAGCCGA ACCCCCCACG
GCCCTGCTGT GGCTCTTGGC CTTCTACTAC GGCCCCCGTG ATGGGAGGCA GCAGAGAGCA
CAGACTATGG CATGGTGA
The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.
RefSeqXP_011516668.1
CDS263..1600
Misc Feature(1)263..>1594(+)
Translation
Position Chain Variation Link
19 19 a, g dbSNP:781462178
31 31 -, cg dbSNP:770240845
32 32 -, cg dbSNP:761226120
33 33 -, cg dbSNP:377454563
34 34 -, cg dbSNP:4647349
38 38 c, t dbSNP:182633348
101 101 a, g dbSNP:549245678
108 108 a, c dbSNP:549658720
198 198 c, t dbSNP:371725430
220 220 a, g dbSNP:776717328
222 222 a, g dbSNP:768624552
223 223 a, g dbSNP:747181277
224 224 a, g dbSNP:751034596
234 234 a, c dbSNP:4647414
235 235 a, g dbSNP:202029417
238 238 a, c dbSNP:56095406
244 244 c, t dbSNP:772475410
245 245 c, g dbSNP:762660689
251 251 a, g dbSNP:779454514
261 261 a, g dbSNP:773045474
267 267 c, t dbSNP:587780940
268 268 c, t dbSNP:376084231
271 271 a, t dbSNP:769585639
277 277 a, g dbSNP:778408360
279 279 c, t dbSNP:527289778
285 285 c, t dbSNP:752249253
288 288 c, t dbSNP:767124692
290 290 g, t dbSNP:147479204
291 291 a, g dbSNP:143152201
296 296 c, t dbSNP:766173332
297 297 a, g dbSNP:762884109
299 299 c, t dbSNP:121917784
300 300 a, g dbSNP:199968672
304 304 c, t dbSNP:760653185
320 320 a, t dbSNP:775755472
323 323 c, g dbSNP:772386467
324 324 a, t dbSNP:746117016
327 327 a, g dbSNP:377294947
329 329 -, g dbSNP:104886459
334 334 a, g dbSNP:771192104
339 339 c, t dbSNP:1800361
350 350 a, t dbSNP:778115754
352 352 c, t dbSNP:756684704
353 353 c, t dbSNP:747616516
366 366 c, g dbSNP:143212932
368 368 c, g dbSNP:544496341
373 373 c, t dbSNP:751219956
374 374 a, g dbSNP:778951584
386 386 c, t dbSNP:758116389
389 389 a, g dbSNP:374836770
397 397 a, g dbSNP:750281533
399 399 a, g dbSNP:765058606
408 408 a, g dbSNP:761845692
429 429 a, t dbSNP:759662786
438 438 c, t dbSNP:149566909
439 439 a, g dbSNP:111782855
440 440 a, g dbSNP:138629441
442 442 c, g dbSNP:763258312
451 451 a, g dbSNP:773388565
453 453 g, t dbSNP:375921240
459 459 c, t dbSNP:762234072
464 464 c, g dbSNP:777111154
465 465 a, g dbSNP:769200374
471 471 a, g, t dbSNP:150174412
476 476 a, g dbSNP:567465885
483 483 c, g dbSNP:745549619
495 495 a, c dbSNP:138722298
501 501 c, t dbSNP:4647419
510 510 a, g dbSNP:140992397
516 516 a, g dbSNP:774807874
527 527 -, a dbSNP:751757203
529 529 -, t dbSNP:777918411
533 533 a, g dbSNP:771619614
534 534 c, t dbSNP:730881730
536 536 c, t dbSNP:745424828
540 540 a, g dbSNP:774029807
541 541 c, t dbSNP:770743418
555 555 -, ttaa dbSNP:754779102
577 577 c, t dbSNP:749048345
581 581 c, t dbSNP:730881731
591 591 c, t dbSNP:777731560
594 594 a, g dbSNP:756057377
605 605 c, t dbSNP:748118992
610 610 -, t dbSNP:760518436
611 611 a, g dbSNP:781167993
613 613 a, g dbSNP:754914546
617 617 a, tctcat dbSNP:587779904
617 617 -, tctc dbSNP:750003253
618 618 a, c dbSNP:145346409
620 620 a, c dbSNP:140264282
622 622 -, t dbSNP:766909460
624 624 c, t dbSNP:745921537
633 633 a, c, t dbSNP:374602991
645 645 a, g dbSNP:555753798
653 653 a, g dbSNP:543546719
654 654 c, t dbSNP:201621236
655 655 c, t dbSNP:111834377
657 657 c, g dbSNP:587779905
659 659 c, t dbSNP:587779906
667 667 a, t dbSNP:756475781
670 670 a, g dbSNP:1800360
678 678 a, g dbSNP:1800362
679 679 -, g dbSNP:751929181
679 679 g, t dbSNP:190925189
689 689 a, g dbSNP:759387035
691 691 a, g dbSNP:759978888
695 695 c, t dbSNP:751054264
698 698 -, tat dbSNP:761347179
700 700 c, t dbSNP:765990832
702 702 c, t dbSNP:730881711
716 716 a, t dbSNP:772984619
717 717 -, a dbSNP:774170058
722 722 a, g dbSNP:761396597
730 730 a, g dbSNP:148616725
732 732 c, t dbSNP:200828924
734 734 c, g dbSNP:372338418
735 735 c, t dbSNP:776429990
736 736 a, g dbSNP:768342908
749 749 -, gaga dbSNP:730881708
752 752 a, g dbSNP:374366585
756 756 a, g dbSNP:568974136
759 759 g, t dbSNP:768672598
762 762 -, a dbSNP:775982309
771 771 a, g dbSNP:749322338
772 772 c, t dbSNP:777734585
776 776 c, g dbSNP:769998628
778 778 a, g dbSNP:748322179
782 782 c, t dbSNP:781542763
783 783 a, g dbSNP:755283850
788 788 c, g dbSNP:767389988
791 791 c, g, t dbSNP:773272931
793 793 c, t dbSNP:150070473
794 794 a, g dbSNP:554302947
796 796 a, g dbSNP:776694218
797 797 c, t dbSNP:769039987
798 798 a, g dbSNP:538875706
804 804 c, t dbSNP:182879858
805 805 a, g dbSNP:758919360
812 812 a, t dbSNP:41306494
813 813 c, t dbSNP:746367952
815 815 c, t dbSNP:121917783
816 816 a, g, t dbSNP:370346767
818 818 a, g dbSNP:730881713
823 823 c, t dbSNP:763610316
827 827 a, c dbSNP:377620735
830 830 c, t dbSNP:1800364
833 833 a, c dbSNP:752429169
834 834 c, t dbSNP:767302089
837 837 c, t dbSNP:776991402
838 838 c, t dbSNP:759392396
845 845 c, g dbSNP:774140528
846 846 a, t dbSNP:1800365
848 848 g, t dbSNP:761766766
850 850 g, t dbSNP:753923581
855 855 c, g dbSNP:534655551
858 858 c, t dbSNP:143213659
860 860 c, g dbSNP:772996041
871 871 c, t dbSNP:567226063
875 875 a, g dbSNP:747249669
882 882 a, t dbSNP:202038890
884 884 a, g dbSNP:772563185
887 887 c, t dbSNP:373270404
888 888 a, g, t dbSNP:587778327
894 894 c, g, t dbSNP:140781259
904 904 a, c dbSNP:777274497
910 910 a, g dbSNP:755695245
912 912 c, t dbSNP:730881714
914 914 c, g dbSNP:752339229
915 915 a, t dbSNP:780879551
916 916 a, g dbSNP:754705988
930 930 c, t dbSNP:751410815
934 934 c, t dbSNP:150647141
935 935 a, c, g, t dbSNP:374176091
937 937 a, g dbSNP:760906091
940 940 c, t dbSNP:775845203
948 948 g, t dbSNP:369770340
952 952 a, g dbSNP:199744457
954 954 -, aga dbSNP:3831244
957 957 c, t dbSNP:759814183
967 967 c, t dbSNP:141828876
968 968 a, c dbSNP:771319430
969 969 g, t dbSNP:763283053
970 970 a, g dbSNP:587779907
972 972 c, t dbSNP:730881715
974 974 c, g dbSNP:553326913
977 977 a, g dbSNP:773685532
979 979 a, g dbSNP:770324737
987 987 c, t dbSNP:747616510
988 988 c, t dbSNP:776140246
995 995 c, t dbSNP:571548182
1004 1004 c, t dbSNP:746679714
1005 1005 c, g dbSNP:779641307
1006 1006 c, g dbSNP:758201013
1007 1007 a, g dbSNP:539583288
1010 1010 a, c dbSNP:778966663
1022 1022 a, g dbSNP:757294568
1025 1025 c, t dbSNP:752779283
1026 1026 c, t dbSNP:767634640
1029 1029 a, g dbSNP:730881716
1048 1048 c, g dbSNP:751791236
1052 1052 a, g dbSNP:111657009
1054 1054 g, t dbSNP:730881717
1062 1062 a, g dbSNP:200854639
1064 1064 a, t dbSNP:730881718
1067 1067 c, g dbSNP:762322090
1070 1070 a, t dbSNP:776054094
1076 1076 a, g dbSNP:768209355
1078 1078 c, t dbSNP:55719336
1079 1079 a, c, g dbSNP:143181565
1085 1085 c, t dbSNP:745621828
1088 1088 a, g dbSNP:377085045
1090 1090 a, g dbSNP:587779908
1097 1097 a, t dbSNP:757190154
1099 1099 a, g dbSNP:772163673
1101 1101 c, t dbSNP:749230615
1102 1102 a, g dbSNP:34671520
1113 1113 c, t dbSNP:201281511
1122 1122 a, c dbSNP:76486610
1128 1128 c, t dbSNP:777732881
1133 1133 c, t dbSNP:769649289
1137 1137 a, g dbSNP:747060782
1139 1139 a, c, g dbSNP:376044404
1142 1142 a, g dbSNP:758549385
1144 1144 c, t dbSNP:750639831
1150 1150 a, g dbSNP:779166059
1151 1151 a, t dbSNP:730881719
1156 1156 c, g dbSNP:757598256
1159 1159 g, t dbSNP:759083348
1164 1164 a, c dbSNP:553689536
1168 1168 c, g dbSNP:766079351
1177 1177 c, t dbSNP:138132690
1178 1178 -, ga dbSNP:779806106
1178 1178 a, g dbSNP:772992002
1193 1193 a, g dbSNP:764937307
1196 1196 a, g dbSNP:1800366
1197 1197 c, t dbSNP:528168019
1200 1200 c, t dbSNP:730881712
1205 1205 a, g dbSNP:587779910
1208 1208 c, t dbSNP:776529713
1211 1211 a, g dbSNP:768621846
1218 1218 c, t dbSNP:745910444
1229 1229 a, g dbSNP:730881720
1233 1233 a, c dbSNP:774439572
1235 1235 a, g dbSNP:201407189
1236 1236 c, t dbSNP:367618818
1237 1237 g, t dbSNP:747463354
1252 1252 c, g dbSNP:374915316
1254 1254 a, g dbSNP:756408779
1255 1255 a, g dbSNP:748582850
1257 1257 a, c dbSNP:781746980
1259 1259 c, g dbSNP:199746448
1262 1262 c, t dbSNP:140348260
1263 1263 a, g dbSNP:377468919
1264 1264 a, g dbSNP:772717264
1268 1268 g, t dbSNP:78555330
1271 1271 c, g, t dbSNP:587779899
1276 1276 a, g dbSNP:780776360
1277 1277 a, t dbSNP:145497019
1279 1279 c, g dbSNP:754772354
1281 1281 a, g dbSNP:746828156
1282 1282 c, t dbSNP:780089246
1285 1285 g, t dbSNP:758439579
1313 1313 a, g dbSNP:753900426
1319 1319 c, t dbSNP:764280581
1324 1324 a, g dbSNP:756202487
1325 1325 c, g dbSNP:587778325
1328 1328 c, t dbSNP:367924414
1331 1331 c, g, t dbSNP:759900071
1337 1337 a, g dbSNP:763375533
1341 1341 c, t dbSNP:730881721
1343 1343 c, t dbSNP:768508859
1344 1344 a, g, t dbSNP:761336987
1352 1352 c, t dbSNP:771694972
1361 1361 a, g dbSNP:776036681
1366 1366 a, g dbSNP:768286785
1371 1371 a, g dbSNP:760256801
1381 1381 a, g dbSNP:775338179
1396 1396 a, g dbSNP:771986157
1398 1398 c, t dbSNP:745693332
1406 1406 c, g dbSNP:778968824
1408 1408 c, g dbSNP:770809637
1410 1410 c, t dbSNP:534854927
1413 1413 a, g dbSNP:577302082
1414 1414 a, c, t dbSNP:748127093
1418 1418 c, t dbSNP:41281202
1423 1423 c, t dbSNP:548998258
1424 1424 a, g dbSNP:371897078
1431 1431 a, c dbSNP:754293275
1436 1436 c, g dbSNP:764699293
1454 1454 a, g dbSNP:755659975
1456 1456 g, t dbSNP:752274299
1462 1462 c, t dbSNP:767215159
1463 1463 a, g dbSNP:730881722
1464 1464 a, g dbSNP:71498691
1477 1477 g, t dbSNP:774113388
1480 1480 c, g dbSNP:766086120
1500 1500 c, t dbSNP:762847515
1503 1503 c, t dbSNP:200719554
1504 1504 a, g dbSNP:587780939
1506 1506 c, t dbSNP:550462055
1510 1510 c, t dbSNP:747051975
1511 1511 a, g dbSNP:140687953
1515 1515 c, t dbSNP:772223845
1517 1517 -, ccc dbSNP:765551897
1517 1517 c, t dbSNP:746074913
1519 1519 -, c dbSNP:776037287
1521 1521 c, t dbSNP:779261511
1522 1522 a, g, t dbSNP:749709412
1523 1523 a, g dbSNP:780136692
1526 1526 a, c dbSNP:756716463
1537 1537 c, g, t dbSNP:767126985
1543 1543 c, t dbSNP:754604606
1547 1547 a, t dbSNP:751143672
1552 1552 c, t dbSNP:766105286
1559 1559 c, t dbSNP:369684405
1560 1560 a, g dbSNP:768676102
1564 1564 -, t dbSNP:730881709
1567 1567 c, g dbSNP:765092951
1569 1569 a, g dbSNP:201549126
1578 1578 a, g dbSNP:730881723
1589 1589 a, g dbSNP:150941781
1591 1591 a, g dbSNP:772133680
1592 1592 c, g dbSNP:769237364
1597 1597 a, g dbSNP:551334290
1607 1607 a, g dbSNP:779630784
1615 1615 a, g dbSNP:533171550
1619 1619 a, g dbSNP:750083277
1623 1623 c, t dbSNP:112446681
1624 1624 a, g dbSNP:757020088
1627 1627 -, ctc dbSNP:368307684
1629 1629 -, cct dbSNP:587778328
1632 1632 g, t dbSNP:753651525
1634 1634 c, t dbSNP:763977186
1638 1638 a, g dbSNP:760662544
1640 1640 c, t dbSNP:752638479
1646 1646 g, t dbSNP:766479365
1656 1656 a, g dbSNP:368191872
1660 1660 c, t dbSNP:41281200
1673 1673 c, t dbSNP:765579399
1677 1677 c, t dbSNP:531401634
1683 1683 a, g dbSNP:777142502

Target ORF information:

RefSeq Version XM_011518366
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens Fanconi anemia, complementation group C (FANCC), transcript variant X4, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1-C-(k)DYK
XM_011518366

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
ATGGCTCAAG ATTCAGTAGA TCTTTCTTGT GATTATCAGT TTTGGATGCA GAAGCTTTCT 
GTATGGGATC AGGCTTCCAC TTTGGAAACC CAGCAAGACA CCTGTCTTCA CGTGGCTCAG
TTCCAGGAGT TCCTAAGGAA GATGTATGAA GCCTTGAAAG AGATGGATTC TAATACAGTC
ATTGAAAGAT TCCCCACAAT TGGTCAACTG TTGGCAAAAG CTTGTTGGAA TCCTTTTATT
TTAGCATATG ATGAAAGCCA AAAAATTCTA ATATGGTGCT TATGTTGTCT AATTAACAAA
GAACCACAGA ATTCTGGACA ATCAAAACTT AACTCCTGGA TACAGGGTGT ATTATCTCAT
ATACTTTCAG CACTCAGATT TGATAAAGAA GTTGCTCTTT TCACTCAAGG TCTTGGGTAT
GCACCTATAG ATTACTATCC TGGTTTGCTT AAAAATATGG TTTTATCATT AGCGTCTGAA
CTCAGAGAGA ATCATCTTAA TGGATTTAAC ACTCAAAGGC GAATGGCTCC CGAGCGAGTG
GCGTCCCTGT CACGAGTTTG TGTCCCACTT ATTACCCTGA CAGATGTTGA CCCCCTGGTG
GAGGCTCTCC TCATCTGTCA TGGACGTGAA CCTCAGGAAA TCCTCCAGCC AGAGTTCTTT
GAGGCTGTAA ACGAGGCCAT TTTGCTGAAG AAGATTTCTC TCCCCATGTC AGCTGTAGTC
TGCCTCTGGC TTCGGCACCT TCCCAGCCTT GAAAAAGCAA TGCTGCATCT TTTTGAAAAG
CTAATCTCCA GTGAGAGAAA TTGTCTGAGA AGGATCGAAT GCTTTATAAA AGATTCATCG
CTGCCTCAAG CAGCCTGCCA CCCTGCCATA TTCCGGGTTG TTGATGAGAT GTTCAGGTGT
GCACTCCTGG AAACCGATGG GGCCCTGGAA ATCATAGCCA CTATTCAGGT GTTTACGCAG
TGCTTTGTAG AAGCTCTGGA GAAAGCAAGC AAGCAGCTGC GGTTTGCACT CAAGACCTAC
TTTCCTTACA CTTCTCCATC TCTTGCCATG GTGCTGCTGC AAGACCCTCA AGATATCCCT
CGGGGACACT GGCTCCAGAC ACTGAAGCAT ATTTCTGAAC TGCTCAGAGA AGCAGTTGAA
GACCAGACTC ATGGGTCCTG CGGAGGTCCC TTTGAGAGCT GGTTCCTGTT CATTCACTTC
GGAGGATGGG CTGAGATGGT GGCAGAGCAA TTACTGATGT CGGCAGCCGA ACCCCCCACG
GCCCTGCTGT GGCTCTTGGC CTTCTACTAC GGCCCCCGTG ATGGGAGGCA GCAGAGAGCA
CAGACTATGG CATGGTGA

The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.


CloneID OHu57678D
Sequence Information ORF Nucleotide Sequence (Length: 1221bp)
Protein sequence
SNP
Vector pcDNA3.1-C-(k)DYK or customized vector
Clone information Clone Map
Tag on pcDNA3.1-C-(k)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product Fanconi anemia group C protein isoform X5
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_008470.20) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
ATGGTTTTAT CATTAGCGTC TGAACTCAGA GAGAATCATC TTAATGGATT TAACACTCAA 
AGGCGAATGG CTCCCGAGCG AGTGGCGTCC CTGTCACGAG TTTGTGTCCC ACTTATTACC
CTGACAGATG TTGACCCCCT GGTGGAGGCT CTCCTCATCT GTCATGGACG TGAACCTCAG
GAAATCCTCC AGCCAGAGTT CTTTGAGGCT GTAAACGAGG CCATTTTGCT GAAGAAGATT
TCTCTCCCCA TGTCAGCTGT AGTCTGCCTC TGGCTTCGGC ACCTTCCCAG CCTTGAAAAA
GCAATGCTGC ATCTTTTTGA AAAGCTAATC TCCAGTGAGA GAAATTGTCT GAGAAGGATC
GAATGCTTTA TAAAAGATTC ATCGCTGCCT CAAGCAGCCT GCCACCCTGC CATATTCCGG
GTTGTTGATG AGATGTTCAG GTGTGCACTC CTGGAAACCG ATGGGGCCCT GGAAATCATA
GCCACTATTC AGGTGTTTAC GCAGTGCTTT GTAGAAGCTC TGGAGAAAGC AAGCAAGCAG
CTGCGGTTTG CACTCAAGAC CTACTTTCCT TACACTTCTC CATCTCTTGC CATGGTGCTG
CTGCAAGACC CTCAAGATAT CCCTCGGGGA CACTGGCTCC AGACACTGAA GCATATTTCT
GAACTGCTCA GAGAAGCAGT TGAAGACCAG ACTCATGGGT CCTGCGGAGG TCCCTTTGAG
AGCTGGTTCC TGTTCATTCA CTTCGGAGGA TGGGCTGAGA TGGTGGCAGA GCAATTACTG
ATGTCGGCAG CCGAACCCCC CACGGCCCTG CTGTGGCTCT TGGCCTTCTA CTACGGCCCC
CGTGATGGGA GGCAGCAGAG AGCACAGACT ATGGTCCAGG TGAAGGCCGT GCTGGGCCAC
CTCCTGGCAA TGTCCAGAAG CAGCAGCCTC TCAGCCCAGG ACCTGCAGAC GGTAGCAGGA
CAGGGCACAG ACACAGACCT CAGAGCTCCT GCACAACAGC TGATCAGGCA CCTTCTCCTC
AACTTCCTGC TCTGGGCTCC TGGAGGCCAC ACGATCGCCT GGGATGTCAT CACCCTGATG
GCTCACACTG CTGAGATAAC TCACGAGATC ATTGGCTTTC TTGACCAGAC CTTGTACAGA
TGGAATCGTC TTGGCATTGA AAGCCCTAGA TCAGAAAAAC TGGCCCGAGA GCTCCTTAAA
GAGCTGCGAA CTCAAGTCTTA G
The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.
RefSeqXP_011516669.1
CDS777..1997
Misc Feature(1)777..1994(+)
Translation
Position Chain Variation Link
37 37 a, t dbSNP:566655665
40 40 c, t dbSNP:187038804
45 45 c, t dbSNP:4647354
60 60 c, t dbSNP:568743438
68 68 c, t dbSNP:4647355
72 72 a, t dbSNP:528998946
74 74 c, t dbSNP:371344168
111 111 c, t dbSNP:371725430
133 133 a, g dbSNP:776717328
135 135 a, g dbSNP:768624552
136 136 a, g dbSNP:747181277
137 137 a, g dbSNP:751034596
147 147 a, c dbSNP:4647414
148 148 a, g dbSNP:202029417
151 151 a, c dbSNP:56095406
157 157 c, t dbSNP:772475410
158 158 c, g dbSNP:762660689
164 164 a, g dbSNP:779454514
174 174 a, g dbSNP:773045474
180 180 c, t dbSNP:587780940
181 181 c, t dbSNP:376084231
184 184 a, t dbSNP:769585639
190 190 a, g dbSNP:778408360
192 192 c, t dbSNP:527289778
198 198 c, t dbSNP:752249253
201 201 c, t dbSNP:767124692
203 203 g, t dbSNP:147479204
204 204 a, g dbSNP:143152201
209 209 c, t dbSNP:766173332
210 210 a, g dbSNP:762884109
212 212 c, t dbSNP:121917784
213 213 a, g dbSNP:199968672
217 217 c, t dbSNP:760653185
233 233 a, t dbSNP:775755472
236 236 c, g dbSNP:772386467
237 237 a, t dbSNP:746117016
240 240 a, g dbSNP:377294947
242 242 -, g dbSNP:104886459
247 247 a, g dbSNP:771192104
252 252 c, t dbSNP:1800361
263 263 a, t dbSNP:778115754
265 265 c, t dbSNP:756684704
266 266 c, t dbSNP:747616516
279 279 c, g dbSNP:143212932
281 281 c, g dbSNP:544496341
286 286 c, t dbSNP:751219956
287 287 a, g dbSNP:778951584
299 299 c, t dbSNP:758116389
302 302 a, g dbSNP:374836770
310 310 a, g dbSNP:750281533
312 312 a, g dbSNP:765058606
321 321 a, g dbSNP:761845692
342 342 a, t dbSNP:759662786
351 351 c, t dbSNP:149566909
352 352 a, g dbSNP:111782855
353 353 a, g dbSNP:138629441
355 355 c, g dbSNP:763258312
364 364 a, g dbSNP:773388565
366 366 g, t dbSNP:375921240
372 372 c, t dbSNP:762234072
377 377 c, g dbSNP:777111154
378 378 a, g dbSNP:769200374
384 384 a, g, t dbSNP:150174412
389 389 a, g dbSNP:567465885
396 396 c, g dbSNP:745549619
408 408 a, c dbSNP:138722298
414 414 c, t dbSNP:4647419
423 423 a, g dbSNP:140992397
429 429 a, g dbSNP:774807874
440 440 -, a dbSNP:751757203
442 442 -, t dbSNP:777918411
446 446 a, g dbSNP:771619614
447 447 c, t dbSNP:730881730
449 449 c, t dbSNP:745424828
453 453 a, g dbSNP:774029807
454 454 c, t dbSNP:770743418
468 468 -, ttaa dbSNP:754779102
490 490 c, t dbSNP:749048345
494 494 c, t dbSNP:730881731
504 504 c, t dbSNP:777731560
507 507 a, g dbSNP:756057377
518 518 c, t dbSNP:748118992
538 538 c, t dbSNP:752685230
544 544 c, t dbSNP:767268059
555 555 c, t dbSNP:547022028
559 559 a, t dbSNP:774289331
566 566 g, t dbSNP:16912021
596 596 a, g dbSNP:529551679
619 619 a, g dbSNP:556668776
629 629 a, g dbSNP:540734301
664 664 c, t dbSNP:114714821
668 668 -, t dbSNP:760518436
669 669 a, g dbSNP:781167993
671 671 a, g dbSNP:754914546
675 675 a, tctcat dbSNP:587779904
675 675 -, tctc dbSNP:750003253
676 676 a, c dbSNP:145346409
678 678 a, c dbSNP:140264282
680 680 -, t dbSNP:766909460
682 682 c, t dbSNP:745921537
691 691 a, c, t dbSNP:374602991
703 703 a, g dbSNP:555753798
711 711 a, g dbSNP:543546719
712 712 c, t dbSNP:201621236
713 713 c, t dbSNP:111834377
715 715 c, g dbSNP:587779905
717 717 c, t dbSNP:587779906
725 725 a, t dbSNP:756475781
728 728 a, g dbSNP:1800360
736 736 a, g dbSNP:1800362
737 737 -, g dbSNP:751929181
737 737 g, t dbSNP:190925189
747 747 a, g dbSNP:759387035
749 749 a, g dbSNP:759978888
753 753 c, t dbSNP:751054264
756 756 -, tat dbSNP:761347179
758 758 c, t dbSNP:765990832
760 760 c, t dbSNP:730881711
774 774 a, t dbSNP:772984619
775 775 -, a dbSNP:774170058
780 780 a, g dbSNP:761396597
788 788 a, g dbSNP:148616725
790 790 c, t dbSNP:200828924
792 792 c, g dbSNP:372338418
793 793 c, t dbSNP:776429990
794 794 a, g dbSNP:768342908
807 807 -, gaga dbSNP:730881708
810 810 a, g dbSNP:374366585
814 814 a, g dbSNP:568974136
817 817 g, t dbSNP:768672598
820 820 -, a dbSNP:775982309
829 829 a, g dbSNP:749322338
830 830 c, t dbSNP:777734585
834 834 c, g dbSNP:769998628
836 836 a, g dbSNP:748322179
840 840 c, t dbSNP:781542763
841 841 a, g dbSNP:755283850
846 846 c, g dbSNP:767389988
849 849 c, g, t dbSNP:773272931
851 851 c, t dbSNP:150070473
852 852 a, g dbSNP:554302947
854 854 a, g dbSNP:776694218
855 855 c, t dbSNP:769039987
856 856 a, g dbSNP:538875706
862 862 c, t dbSNP:182879858
863 863 a, g dbSNP:758919360
870 870 a, t dbSNP:41306494
871 871 c, t dbSNP:746367952
873 873 c, t dbSNP:121917783
874 874 a, g, t dbSNP:370346767
876 876 a, g dbSNP:730881713
881 881 c, t dbSNP:763610316
885 885 a, c dbSNP:377620735
888 888 c, t dbSNP:1800364
891 891 a, c dbSNP:752429169
892 892 c, t dbSNP:767302089
895 895 c, t dbSNP:776991402
896 896 c, t dbSNP:759392396
903 903 c, g dbSNP:774140528
904 904 a, t dbSNP:1800365
906 906 g, t dbSNP:761766766
908 908 g, t dbSNP:753923581
913 913 c, g dbSNP:534655551
916 916 c, t dbSNP:143213659
918 918 c, g dbSNP:772996041
929 929 c, t dbSNP:567226063
933 933 a, g dbSNP:747249669
940 940 a, t dbSNP:202038890
942 942 a, g dbSNP:772563185
945 945 c, t dbSNP:373270404
946 946 a, g, t dbSNP:587778327
952 952 c, g, t dbSNP:140781259
962 962 a, c dbSNP:777274497
968 968 a, g dbSNP:755695245
970 970 c, t dbSNP:730881714
972 972 c, g dbSNP:752339229
973 973 a, t dbSNP:780879551
974 974 a, g dbSNP:754705988
988 988 c, t dbSNP:751410815
992 992 c, t dbSNP:150647141
993 993 a, c, g, t dbSNP:374176091
995 995 a, g dbSNP:760906091
998 998 c, t dbSNP:775845203
1006 1006 g, t dbSNP:369770340
1010 1010 a, g dbSNP:199744457
1012 1012 -, aga dbSNP:3831244
1015 1015 c, t dbSNP:759814183
1025 1025 c, t dbSNP:141828876
1026 1026 a, c dbSNP:771319430
1027 1027 g, t dbSNP:763283053
1028 1028 a, g dbSNP:587779907
1030 1030 c, t dbSNP:730881715
1032 1032 c, g dbSNP:553326913
1035 1035 a, g dbSNP:773685532
1037 1037 a, g dbSNP:770324737
1045 1045 c, t dbSNP:747616510
1046 1046 c, t dbSNP:776140246
1053 1053 c, t dbSNP:571548182
1062 1062 c, t dbSNP:746679714
1063 1063 c, g dbSNP:779641307
1064 1064 c, g dbSNP:758201013
1065 1065 a, g dbSNP:539583288
1068 1068 a, c dbSNP:778966663
1080 1080 a, g dbSNP:757294568
1083 1083 c, t dbSNP:752779283
1084 1084 c, t dbSNP:767634640
1087 1087 a, g dbSNP:730881716
1106 1106 c, g dbSNP:751791236
1110 1110 a, g dbSNP:111657009
1112 1112 g, t dbSNP:730881717
1120 1120 a, g dbSNP:200854639
1122 1122 a, t dbSNP:730881718
1125 1125 c, g dbSNP:762322090
1128 1128 a, t dbSNP:776054094
1134 1134 a, g dbSNP:768209355
1136 1136 c, t dbSNP:55719336
1137 1137 a, c, g dbSNP:143181565
1143 1143 c, t dbSNP:745621828
1146 1146 a, g dbSNP:377085045
1148 1148 a, g dbSNP:587779908
1155 1155 a, t dbSNP:757190154
1157 1157 a, g dbSNP:772163673
1159 1159 c, t dbSNP:749230615
1160 1160 a, g dbSNP:34671520
1171 1171 c, t dbSNP:201281511
1180 1180 a, c dbSNP:76486610
1186 1186 c, t dbSNP:777732881
1191 1191 c, t dbSNP:769649289
1195 1195 a, g dbSNP:747060782
1197 1197 a, c, g dbSNP:376044404
1200 1200 a, g dbSNP:758549385
1202 1202 c, t dbSNP:750639831
1208 1208 a, g dbSNP:779166059
1209 1209 a, t dbSNP:730881719
1214 1214 c, g dbSNP:757598256
1217 1217 g, t dbSNP:759083348
1222 1222 a, c dbSNP:553689536
1226 1226 c, g dbSNP:766079351
1235 1235 c, t dbSNP:138132690
1236 1236 -, ga dbSNP:779806106
1236 1236 a, g dbSNP:772992002
1251 1251 a, g dbSNP:764937307
1254 1254 a, g dbSNP:1800366
1255 1255 c, t dbSNP:528168019
1258 1258 c, t dbSNP:730881712
1263 1263 a, g dbSNP:587779910
1266 1266 c, t dbSNP:776529713
1269 1269 a, g dbSNP:768621846
1276 1276 c, t dbSNP:745910444
1287 1287 a, g dbSNP:730881720
1291 1291 a, c dbSNP:774439572
1293 1293 a, g dbSNP:201407189
1294 1294 c, t dbSNP:367618818
1295 1295 g, t dbSNP:747463354
1310 1310 c, g dbSNP:374915316
1312 1312 a, g dbSNP:756408779
1313 1313 a, g dbSNP:748582850
1315 1315 a, c dbSNP:781746980
1317 1317 c, g dbSNP:199746448
1320 1320 c, t dbSNP:140348260
1321 1321 a, g dbSNP:377468919
1322 1322 a, g dbSNP:772717264
1326 1326 g, t dbSNP:78555330
1329 1329 c, g, t dbSNP:587779899
1334 1334 a, g dbSNP:780776360
1335 1335 a, t dbSNP:145497019
1337 1337 c, g dbSNP:754772354
1339 1339 a, g dbSNP:746828156
1340 1340 c, t dbSNP:780089246
1343 1343 g, t dbSNP:758439579
1371 1371 a, g dbSNP:753900426
1377 1377 c, t dbSNP:764280581
1382 1382 a, g dbSNP:756202487
1383 1383 c, g dbSNP:587778325
1386 1386 c, t dbSNP:367924414
1389 1389 c, g, t dbSNP:759900071
1395 1395 a, g dbSNP:763375533
1399 1399 c, t dbSNP:730881721
1401 1401 c, t dbSNP:768508859
1402 1402 a, g, t dbSNP:761336987
1410 1410 c, t dbSNP:771694972
1419 1419 a, g dbSNP:776036681
1424 1424 a, g dbSNP:768286785
1429 1429 a, g dbSNP:760256801
1439 1439 a, g dbSNP:775338179
1454 1454 a, g dbSNP:771986157
1456 1456 c, t dbSNP:745693332
1464 1464 c, g dbSNP:778968824
1466 1466 c, g dbSNP:770809637
1468 1468 c, t dbSNP:534854927
1471 1471 a, g dbSNP:577302082
1472 1472 a, c, t dbSNP:748127093
1476 1476 c, t dbSNP:41281202
1481 1481 c, t dbSNP:548998258
1482 1482 a, g dbSNP:371897078
1489 1489 a, c dbSNP:754293275
1494 1494 c, g dbSNP:764699293
1512 1512 a, g dbSNP:755659975
1514 1514 g, t dbSNP:752274299
1520 1520 c, t dbSNP:767215159
1521 1521 a, g dbSNP:730881722
1522 1522 a, g dbSNP:71498691
1535 1535 g, t dbSNP:774113388
1538 1538 c, g dbSNP:766086120
1558 1558 c, t dbSNP:762847515
1561 1561 c, t dbSNP:200719554
1562 1562 a, g dbSNP:587780939
1564 1564 c, t dbSNP:550462055
1568 1568 c, t dbSNP:747051975
1569 1569 a, g dbSNP:140687953
1573 1573 c, t dbSNP:772223845
1575 1575 -, ccc dbSNP:765551897
1575 1575 c, t dbSNP:746074913
1577 1577 -, c dbSNP:776037287
1579 1579 c, t dbSNP:779261511
1580 1580 a, g, t dbSNP:749709412
1581 1581 a, g dbSNP:780136692
1584 1584 a, c dbSNP:756716463
1595 1595 c, g, t dbSNP:767126985
1601 1601 c, t dbSNP:754604606
1605 1605 a, t dbSNP:751143672
1610 1610 c, t dbSNP:766105286
1617 1617 c, t dbSNP:369684405
1618 1618 a, g dbSNP:768676102
1622 1622 -, t dbSNP:730881709
1625 1625 c, g dbSNP:765092951
1627 1627 a, g dbSNP:201549126
1636 1636 a, g dbSNP:730881723
1647 1647 a, g dbSNP:150941781
1649 1649 a, g dbSNP:772133680
1658 1658 a, g dbSNP:764514171
1664 1664 c, t dbSNP:760983825
1665 1665 a, g dbSNP:1800367
1671 1671 a, g dbSNP:141805918
1672 1672 c, g dbSNP:772474835
1673 1673 c, t dbSNP:745338413
1683 1683 c, g, t dbSNP:730881724
1694 1694 a, c dbSNP:56394801
1699 1699 a, g dbSNP:748938789
1707 1707 -, tc dbSNP:730881710
1714 1714 a, g dbSNP:1800368
1726 1726 c, t dbSNP:149917017
1727 1727 a, g dbSNP:79722116
1729 1729 c, t dbSNP:781144846
1734 1734 a, g dbSNP:201063698
1745 1745 a, g dbSNP:199739450
1757 1757 c, t dbSNP:765396609
1760 1760 a, g dbSNP:757477758
1764 1764 -, cct dbSNP:773270231
1766 1766 c, t dbSNP:754079401
1770 1770 a, c dbSNP:764271678
1776 1776 a, c dbSNP:761050718
1777 1777 c, t dbSNP:753031127
1791 1791 c, g dbSNP:767996832
1799 1799 a, c dbSNP:760046823
1802 1802 c, g dbSNP:200423281
1805 1805 a, c, g dbSNP:56082100
1807 1807 g, t dbSNP:121917785
1809 1809 c, t dbSNP:587779900
1810 1810 c, g dbSNP:762501862
1811 1811 c, g dbSNP:576831650
1813 1813 c, t dbSNP:730881725
1814 1814 c, t dbSNP:76895298
1821 1821 a, g dbSNP:746540247
1822 1822 a, g dbSNP:536599109
1828 1828 c, t dbSNP:779982610
1829 1829 a, g dbSNP:144278080
1832 1832 c, t dbSNP:746940880
1833 1833 a, g dbSNP:780179187
1836 1836 c, t dbSNP:730881726
1844 1844 c, t dbSNP:765766432
1850 1850 c, t dbSNP:372199352
1860 1860 c, t dbSNP:749319183
1864 1864 c, g dbSNP:201379302
1880 1880 c, t dbSNP:150020474
1881 1881 a, g dbSNP:752855423
1882 1882 a, c dbSNP:781445050
1890 1890 a, g dbSNP:755289392
1895 1895 g, t dbSNP:587779901
1905 1905 a, c dbSNP:587778326
1909 1909 c, t dbSNP:766809608
1913 1913 c, t dbSNP:758842354
1914 1914 a, c, g dbSNP:764649916
1915 1915 a, g dbSNP:55939573
1917 1917 g, t dbSNP:730881728
1923 1923 c, t dbSNP:185822330
1924 1924 a, g dbSNP:587779902
1927 1927 c, t dbSNP:587779903
1930 1930 a, g, t dbSNP:775430136
1942 1942 -, c dbSNP:766410371
1943 1943 g, t dbSNP:375362894
1954 1954 a, g dbSNP:571668582
1962 1962 c, t dbSNP:104886457
1963 1963 a, g dbSNP:730881729
1980 1980 c, t dbSNP:769743634
1981 1981 c, t dbSNP:104886458
1983 1983 a, c, t dbSNP:370974124
1984 1984 a, g dbSNP:369636116
1991 1991 a, g dbSNP:780384904
1992 1992 g, t dbSNP:758866109
1995 1995 c, t dbSNP:750866823
2002 2002 c, t dbSNP:117175949
2004 2004 c, t dbSNP:372511678
2005 2005 a, g dbSNP:753428914
2006 2006 c, t dbSNP:370270817
2011 2011 c, t dbSNP:760413505
2012 2012 a, g dbSNP:775336408
2013 2013 c, t dbSNP:767209716
2014 2014 g, t dbSNP:759413874
2021 2021 c, t dbSNP:774109877
2023 2023 c, t dbSNP:770935196
2024 2024 a, g dbSNP:761796772
2026 2026 c, t dbSNP:531605962
2027 2027 a, g dbSNP:375908568
2033 2033 -, t dbSNP:34831009
2033 2033 g, t dbSNP:747229495
2034 2034 a, t dbSNP:76092534
2035 2035 a, t dbSNP:76575945
2035 2035 -, t dbSNP:34760720
2039 2039 a, c, g dbSNP:7029888
2042 2042 c, t dbSNP:763914550
2043 2043 a, g dbSNP:369503655
2044 2044 c, t dbSNP:757786105
2067 2067 a, g dbSNP:369235858
2074 2074 a, g dbSNP:56383909
2078 2078 c, t dbSNP:760573194
2079 2079 a, g dbSNP:529828813
2080 2080 c, t dbSNP:779450392
2093 2093 a, g dbSNP:55687573
2101 2101 c, t dbSNP:540891064
2108 2108 c, t dbSNP:771289098
2113 2113 a, c dbSNP:7048910
2137 2137 a, g dbSNP:558379284
2140 2140 a, g dbSNP:189154697
2154 2154 a, g dbSNP:576156516
2210 2210 g, t dbSNP:184733418
2244 2244 c, t dbSNP:369774588
2247 2247 a, g dbSNP:193261247
2251 2251 a, g dbSNP:773331481
2264 2264 a, g dbSNP:769817519
2344 2344 g, t dbSNP:572523801
2356 2356 a, g dbSNP:4647551
2378 2378 g, t dbSNP:538871646
2391 2391 a, g dbSNP:143389232

Target ORF information:

RefSeq Version XM_011518367
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens Fanconi anemia, complementation group C (FANCC), transcript variant X5, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1-C-(k)DYK
XM_011518367

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
ATGGTTTTAT CATTAGCGTC TGAACTCAGA GAGAATCATC TTAATGGATT TAACACTCAA 
AGGCGAATGG CTCCCGAGCG AGTGGCGTCC CTGTCACGAG TTTGTGTCCC ACTTATTACC
CTGACAGATG TTGACCCCCT GGTGGAGGCT CTCCTCATCT GTCATGGACG TGAACCTCAG
GAAATCCTCC AGCCAGAGTT CTTTGAGGCT GTAAACGAGG CCATTTTGCT GAAGAAGATT
TCTCTCCCCA TGTCAGCTGT AGTCTGCCTC TGGCTTCGGC ACCTTCCCAG CCTTGAAAAA
GCAATGCTGC ATCTTTTTGA AAAGCTAATC TCCAGTGAGA GAAATTGTCT GAGAAGGATC
GAATGCTTTA TAAAAGATTC ATCGCTGCCT CAAGCAGCCT GCCACCCTGC CATATTCCGG
GTTGTTGATG AGATGTTCAG GTGTGCACTC CTGGAAACCG ATGGGGCCCT GGAAATCATA
GCCACTATTC AGGTGTTTAC GCAGTGCTTT GTAGAAGCTC TGGAGAAAGC AAGCAAGCAG
CTGCGGTTTG CACTCAAGAC CTACTTTCCT TACACTTCTC CATCTCTTGC CATGGTGCTG
CTGCAAGACC CTCAAGATAT CCCTCGGGGA CACTGGCTCC AGACACTGAA GCATATTTCT
GAACTGCTCA GAGAAGCAGT TGAAGACCAG ACTCATGGGT CCTGCGGAGG TCCCTTTGAG
AGCTGGTTCC TGTTCATTCA CTTCGGAGGA TGGGCTGAGA TGGTGGCAGA GCAATTACTG
ATGTCGGCAG CCGAACCCCC CACGGCCCTG CTGTGGCTCT TGGCCTTCTA CTACGGCCCC
CGTGATGGGA GGCAGCAGAG AGCACAGACT ATGGTCCAGG TGAAGGCCGT GCTGGGCCAC
CTCCTGGCAA TGTCCAGAAG CAGCAGCCTC TCAGCCCAGG ACCTGCAGAC GGTAGCAGGA
CAGGGCACAG ACACAGACCT CAGAGCTCCT GCACAACAGC TGATCAGGCA CCTTCTCCTC
AACTTCCTGC TCTGGGCTCC TGGAGGCCAC ACGATCGCCT GGGATGTCAT CACCCTGATG
GCTCACACTG CTGAGATAAC TCACGAGATC ATTGGCTTTC TTGACCAGAC CTTGTACAGA
TGGAATCGTC TTGGCATTGA AAGCCCTAGA TCAGAAAAAC TGGCCCGAGA GCTCCTTAAA
GAGCTGCGAA CTCAAGTCTTA G

The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.


CloneID OHu43078D
Sequence Information ORF Nucleotide Sequence (Length: 1029bp)
Protein sequence
SNP
Vector pcDNA3.1-C-(k)DYK or customized vector
Clone information Clone Map
Tag on pcDNA3.1-C-(k)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product Fanconi anemia group C protein isoform X6
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_008470.20) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 12, 2015 this sequence version replaced gi:578817181. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGGCTCAAG ATTCAGTAGA TCTTTCTTGT GATTATCAGT TTTGGATGCA GAAGCTTTCT 
GTATGGGATC AGGCTTCCAC TTTGGAAACC CAGCAAGACA CCTGTCTTCA CGTGGCTCAG
TTCCAGGAGT TCCTAAGGAA GATGTATGAA GCCTTGAAAG AGATGGATTC TAATACAGTC
ATTGAAAGAT TCCCCACAAT TGGTCAACTG TTGGCAAAAG CTTGTTGGAA TCCTTTTATT
TTAGCATATG ATGAAAGCCA AAAAATTCTA ATATGGTGCT TATGTTGTCT AATTAACAAA
GAACCACAGA ATTCTGGACA ATCAAAACTT AACTCCTGGA TACAGGGTGT ATTATCTCAT
ATACTTTCAG CACTCAGATT TGATAAAGAA GTTGCTCTTT TCACTCAAGG TCTTGGGTAT
GCACCTATAG ATTACTATCC TGGTTTGCTT AAAAATATGG TTTTATCATT AGCGTCTGAA
CTCAGAGAGA ATCATCTTAA TGGATTTAAC ACTCAAAGGC GAATGGCTCC CGAGCGAGTG
GCGTCCCTGT CACGAGTTTG TGTCCCACTT ATTACCCTGA CAGATGTTGA CCCCCTGGTG
GAGGCTCTCC TCATCTGTCA TGGACGTGAA CCTCAGGAAA TCCTCCAGCC AGAGTTCTTT
GAGGCTGTAA ACGAGGCCAT TTTGCTGAAG AAGATTTCTC TCCCCATGTC AGCTGTAGTC
TGCCTCTGGC TTCGGCACCT TCCCAGCCTT GAAAAAGCAA TGCTGCATCT TTTTGAAAAG
CTAATCTCCA GTGAGAGAAA TTGTCTGAGA AGGATCGAAT GCTTTATAAA AGATTCATCG
CTGCCTCAAG CAGCCTGCCA CCCTGCCATA TTCCGGGTTG TTGATGAGAT GTTCAGGTGT
GCACTCCTGG AAACCGATGG GGCCCTGGAA ATCATAGCCA CTATTCAGGT GTTTACGCAG
TGCTTTGTAG AAGCTCTGGA GAAAGCAAGC AAGCAGATAT CCCTCGGGGA CACTGGCTCC
AGACACTGA
The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.
RefSeqXP_006717067.1
CDS263..1291
Misc Feature(1)263..>1267(+)
Translation
Position Chain Variation Link
19 19 a, g dbSNP:781462178
31 31 -, cg dbSNP:770240845
32 32 -, cg dbSNP:761226120
33 33 -, cg dbSNP:377454563
34 34 -, cg dbSNP:4647349
38 38 c, t dbSNP:182633348
101 101 a, g dbSNP:549245678
108 108 a, c dbSNP:549658720
198 198 c, t dbSNP:371725430
220 220 a, g dbSNP:776717328
222 222 a, g dbSNP:768624552
223 223 a, g dbSNP:747181277
224 224 a, g dbSNP:751034596
234 234 a, c dbSNP:4647414
235 235 a, g dbSNP:202029417
238 238 a, c dbSNP:56095406
244 244 c, t dbSNP:772475410
245 245 c, g dbSNP:762660689
251 251 a, g dbSNP:779454514
261 261 a, g dbSNP:773045474
267 267 c, t dbSNP:587780940
268 268 c, t dbSNP:376084231
271 271 a, t dbSNP:769585639
277 277 a, g dbSNP:778408360
279 279 c, t dbSNP:527289778
285 285 c, t dbSNP:752249253
288 288 c, t dbSNP:767124692
290 290 g, t dbSNP:147479204
291 291 a, g dbSNP:143152201
296 296 c, t dbSNP:766173332
297 297 a, g dbSNP:762884109
299 299 c, t dbSNP:121917784
300 300 a, g dbSNP:199968672
304 304 c, t dbSNP:760653185
320 320 a, t dbSNP:775755472
323 323 c, g dbSNP:772386467
324 324 a, t dbSNP:746117016
327 327 a, g dbSNP:377294947
329 329 -, g dbSNP:104886459
334 334 a, g dbSNP:771192104
339 339 c, t dbSNP:1800361
350 350 a, t dbSNP:778115754
352 352 c, t dbSNP:756684704
353 353 c, t dbSNP:747616516
366 366 c, g dbSNP:143212932
368 368 c, g dbSNP:544496341
373 373 c, t dbSNP:751219956
374 374 a, g dbSNP:778951584
386 386 c, t dbSNP:758116389
389 389 a, g dbSNP:374836770
397 397 a, g dbSNP:750281533
399 399 a, g dbSNP:765058606
408 408 a, g dbSNP:761845692
429 429 a, t dbSNP:759662786
438 438 c, t dbSNP:149566909
439 439 a, g dbSNP:111782855
440 440 a, g dbSNP:138629441
442 442 c, g dbSNP:763258312
451 451 a, g dbSNP:773388565
453 453 g, t dbSNP:375921240
459 459 c, t dbSNP:762234072
464 464 c, g dbSNP:777111154
465 465 a, g dbSNP:769200374
471 471 a, g, t dbSNP:150174412
476 476 a, g dbSNP:567465885
483 483 c, g dbSNP:745549619
495 495 a, c dbSNP:138722298
501 501 c, t dbSNP:4647419
510 510 a, g dbSNP:140992397
516 516 a, g dbSNP:774807874
527 527 -, a dbSNP:751757203
529 529 -, t dbSNP:777918411
533 533 a, g dbSNP:771619614
534 534 c, t dbSNP:730881730
536 536 c, t dbSNP:745424828
540 540 a, g dbSNP:774029807
541 541 c, t dbSNP:770743418
555 555 -, ttaa dbSNP:754779102
577 577 c, t dbSNP:749048345
581 581 c, t dbSNP:730881731
591 591 c, t dbSNP:777731560
594 594 a, g dbSNP:756057377
605 605 c, t dbSNP:748118992
610 610 -, t dbSNP:760518436
611 611 a, g dbSNP:781167993
613 613 a, g dbSNP:754914546
617 617 a, tctcat dbSNP:587779904
617 617 -, tctc dbSNP:750003253
618 618 a, c dbSNP:145346409
620 620 a, c dbSNP:140264282
622 622 -, t dbSNP:766909460
624 624 c, t dbSNP:745921537
633 633 a, c, t dbSNP:374602991
645 645 a, g dbSNP:555753798
653 653 a, g dbSNP:543546719
654 654 c, t dbSNP:201621236
655 655 c, t dbSNP:111834377
657 657 c, g dbSNP:587779905
659 659 c, t dbSNP:587779906
667 667 a, t dbSNP:756475781
670 670 a, g dbSNP:1800360
678 678 a, g dbSNP:1800362
679 679 -, g dbSNP:751929181
679 679 g, t dbSNP:190925189
689 689 a, g dbSNP:759387035
691 691 a, g dbSNP:759978888
695 695 c, t dbSNP:751054264
698 698 -, tat dbSNP:761347179
700 700 c, t dbSNP:765990832
702 702 c, t dbSNP:730881711
716 716 a, t dbSNP:772984619
717 717 -, a dbSNP:774170058
722 722 a, g dbSNP:761396597
730 730 a, g dbSNP:148616725
732