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LHX6 LIM homeobox 6 [Homo sapiens (human)]

Gene Symbol LHX6
Entrez Gene ID 26468
Full Name LIM homeobox 6
Synonyms LHX6.1
General protein information
Preferred Names
LIM/homeobox protein Lhx6
Names
LIM/homeobox protein Lhx6
LIM homeodomain protein 6.1
LIM/homeobox protein Lhx6.1
Gene Type protein-coding
Organism Homo sapiens (human)
Genome

9

9q33.2

Summary This gene encodes a member of a large protein family that contains the LIM domain, a unique cysteine-rich zinc-binding domain. The encoded protein may function as a transcriptional regulator and may be involved in the control of differentiation and development of neural and lymphoid cells. Two alternatively spliced transcript variants encoding distinct isoforms have been described for this gene. Alternatively spliced transcript variants have been identified, but their biological validity has not been determined. [provided by RefSeq, Jul 2008]. lac of sum
Disorder MIM:

608215

Disorder Html:





The following LHX6 gene sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LHX6 gene which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

CloneID RefSeq Accession Definition **Vector *Turnaround time Price Select
OHu66927 XM_011518521 PREDICTED: Homo sapiens LIM homeobox 6 (LHX6), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $319
OHu66928 XM_011518522 PREDICTED: Homo sapiens LIM homeobox 6 (LHX6), transcript variant X2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $319
OHu66929 XM_011518523 PREDICTED: Homo sapiens LIM homeobox 6 (LHX6), transcript variant X3, mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $319
OHu43185 XM_005251916 PREDICTED: Homo sapiens LIM homeobox 6 (LHX6), transcript variant X4, mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $199
OHu18448 NM_014368 Homo sapiens LIM homeobox 6 (LHX6), transcript variant 1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $319
OHu11381 NM_199160 Homo sapiens LIM homeobox 6 (LHX6), transcript variant 2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $319
OHu11300 NM_001242333 Homo sapiens LIM homeobox 6 (LHX6), transcript variant 3, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $319
OHu12077 NM_001242334 Homo sapiens LIM homeobox 6 (LHX6), transcript variant 4, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 5-7 $319
OHu11090 NM_001242335 Homo sapiens LIM homeobox 6 (LHX6), transcript variant 5, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 5-7 $99

*Business Day
**You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.


CloneID OHu66927
Accession Version XM_011518521.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1224bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector Document: User manual_GenEZ ORF Clone Products.pdf (pdf)
Clone information Clone Map
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags Document: MSDS_GenEZ ORF Clone Products.pdf (pdf)
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product LIM/homeobox protein Lhx6 isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_008470.20) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
ATGTACTGGA AGCATGAGAA CGCCGCCCCG GCGTTGCCCG AGGGCTGCCG GCTGCCGGCC 
GAGGGCGGCC CCGCCACCGA CCAGGTGATG GCCCAGCCAG GGTCCGGCTG CAAAGCGACC
ACCCGCTGTC TTGAAGGGAC CGCGCCGCCC GCCATGGCTC AGTCTGACGC CGAGGCCCTG
GCAGGAGCTC TGGACAAGGA CGAGGGTCAG GCCTCCCCAT GTACGCCCAG CACGCCATCT
GTCTGCTCAC CGCCCTCTGC CGCCTCCTCC GTGCCGTCTG CAGGCAAGAA CATCTGCTCC
AGCTGCGGCC TCGAGATCCT GGACCGATAT CTGCTCAAGG TCAACAACCT CATCTGGCAC
GTGCGGTGCC TCGAGTGCTC CGTGTGTCGC ACGTCGCTGA GGCAGCAGAA CAGCTGCTAC
ATCAAGAACA AGGAGATCTT CTGCAAGATG GACTACTTCA GCCGATTCGG GACCAAGTGT
GCCCGGTGCG GCCGACAGAT CTACGCCAGC GACTGGGTGC GGAGAGCTCG CGGCAACGCC
TACCACCTGG CCTGCTTCGC CTGCTTCTCG TGCAAGCGCC AGCTGTCCAC TGGTGAGGAG
TTCGGCCTGG TCGAGGAGAA GGTGCTCTGC CGCATCCACT ACGACACCAT GATTGAGAAC
CTCAAGAGGG CCGCCGAGAA CGGGAACGGC CTCACGTTGG AGGGGGCAGT GCCCTCGGAA
CAGGACAGTC AACCCAAGCC GGCCAAGCGC GCGCGGACGT CCTTCACCGC GGAACAGCTG
CAGGTTATGC AGGCGCAGTT CGCGCAGGAC AACAACCCCG ACGCTCAGAC GCTGCAGAAG
CTGGCGGACA TGACGGGCCT CAGCCGGAGA GTCATCCAGG TGTGGTTTCA AAACTGCCGG
GCGCGTCATA AAAAGCACAC GCCGCAACAC CCAGTGCCGC CCTCGGGGGC GCCCCCGTCC
CGCCTTCCCT CCGCCCTGTC CGACGACATC CACTACACCC CGTTCAGCAG CCCCGAGCGG
GCGCGCATGG TCACCCTGCA CGGCTACATT GAGACAAATG CGCGTCTGCT GGCAGGGATG
TGTGATTGGT GCGGGCATTT GATTTGGCAG TTACAGCGTA TTATCCCTCC ACAAAGCCTT
CATTACGGTG CTGCTAACAA CACCGCAGAT AAAGCATGGA TGTCCCCGCG TGCCAGCCTC
CAGGTGATTA TAACATTTCG GTAA
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeqXP_011516823.1
CDS154..1377
Misc Feature(1)448..609(+)
Misc Feature(2)448..606(+)
Misc Feature(3)631..795(+)
Misc Feature(4)631..792(+)
Misc Feature(5)898..1071(+)
Misc Feature(6)898..1068(+)
Misc Feature(7)904..1056(+)
Translation
Position Chain Variation Link
8 8 g, t dbSNP:527309936
141 141 a, g dbSNP:375357673
148 148 c, t dbSNP:780004247
181 181 c, t dbSNP:542907528
186 186 c, g dbSNP:745966328
193 193 a, g dbSNP:533000903
209 209 c, g dbSNP:757424954
210 210 a, g dbSNP:754032975
213 213 c, g dbSNP:777842782
214 214 a, g dbSNP:756543417
220 220 g, t dbSNP:752983974
225 225 a, c, g dbSNP:760080455
246 246 a, c dbSNP:752172261
247 247 c, g dbSNP:766793975
259 259 c, g dbSNP:368987512
277 277 c, g dbSNP:753262130
302 302 c, t dbSNP:763826373
355 355 c, g dbSNP:770060170
373 373 c, t dbSNP:748326948
379 379 a, c dbSNP:781554821
390 390 a, g dbSNP:755464037
402 402 a, c dbSNP:747349715
413 413 c, t dbSNP:780658108
414 414 c, t dbSNP:138880738
424 424 g, t dbSNP:753416011
430 430 c, t dbSNP:368544328
452 452 c, g dbSNP:764112046
465 465 c, g dbSNP:114083078
477 477 a, c dbSNP:185007094
501 501 a, c dbSNP:774057122
513 513 c, t dbSNP:368399322
514 514 g, t dbSNP:762036833
516 516 a, g dbSNP:776800689
519 519 a, g dbSNP:546749513
525 525 c, g dbSNP:769028128
534 534 c, g dbSNP:760908427
549 549 a, g dbSNP:150186287
554 554 a, g dbSNP:772377957
564 564 c, g dbSNP:572755316
576 576 c, t dbSNP:746238566
602 602 c, t dbSNP:114142278
612 612 c, t dbSNP:771379752
618 618 a, t dbSNP:753881753
630 630 a, g dbSNP:764121568
637 637 a, c dbSNP:756354677
651 651 g, t dbSNP:565893915
657 657 c, t dbSNP:756188084
672 672 g, t dbSNP:752798437
699 699 c, t dbSNP:767665614
705 705 c, t dbSNP:369599249
711 711 c, t dbSNP:116345380
717 717 c, t dbSNP:766789049
729 729 a, g dbSNP:141830577
744 744 c, t dbSNP:748394379
756 756 c, t dbSNP:770315479
759 759 a, c dbSNP:746525707
760 760 c, t dbSNP:201468383
789 789 c, g dbSNP:771625399
801 801 c, t dbSNP:745463090
805 805 a, g dbSNP:201011938
813 813 c, t dbSNP:778691163
816 816 a, c dbSNP:757184088
821 821 a, g dbSNP:749060535
823 823 a, g dbSNP:781352243
825 825 c, t dbSNP:777904963
828 828 c, g, t dbSNP:752726361
847 847 a, g dbSNP:756959110
849 849 a, g dbSNP:148096760
857 857 a, g dbSNP:748176324
870 870 g, t dbSNP:780988976
875 875 a, g dbSNP:200081104
894 894 c, g dbSNP:755129234
901 901 c, g dbSNP:751619203
912 912 a, c, g dbSNP:758583063
922 922 a, g dbSNP:141012050
924 924 c, g dbSNP:566259981
941 941 c, t dbSNP:778214950
948 948 a, g dbSNP:756534518
955 955 a, g dbSNP:753322621
957 957 g, t dbSNP:768108756
984 984 a, g dbSNP:758032415
999 999 g, t dbSNP:749855769
1003 1003 a, c, g dbSNP:761309017
1004 1004 a, t dbSNP:776502085
1007 1007 c, t dbSNP:763932135
1009 1009 g, t dbSNP:760455304
1020 1020 c, g dbSNP:775443266
1047 1047 c, t dbSNP:748826406
1077 1077 a, g dbSNP:777196788
1084 1084 c, t dbSNP:755776987
1091 1091 a, c dbSNP:142314211
1098 1098 c, g dbSNP:11789619
1103 1103 c, g dbSNP:113280031
1110 1110 a, g, t dbSNP:566096736
1122 1122 c, g dbSNP:751320966
1125 1125 c, t dbSNP:373399550
1127 1127 c, t dbSNP:758346959
1128 1128 a, c dbSNP:750546801
1129 1129 c, g dbSNP:765474854
1136 1136 a, g dbSNP:761983883
1137 1137 c, g dbSNP:776753440
1139 1139 a, c dbSNP:764350949
1142 1142 a, g, t dbSNP:775881165
1143 1143 a, c dbSNP:772460631
1145 1145 a, g dbSNP:746314669
1154 1154 c, g dbSNP:774825314
1165 1165 c, t dbSNP:769359783
1167 1167 c, t dbSNP:747634996
1180 1180 a, g dbSNP:780731428
1181 1181 c, t dbSNP:375958601
1197 1197 c, t dbSNP:746787054
1198 1198 c, t dbSNP:779843806
1217 1217 a, g dbSNP:754771734
1271 1271 a, g dbSNP:138994692
1299 1299 c, t dbSNP:12002406
1316 1316 c, t dbSNP:765970696
1317 1317 c, t dbSNP:372343730
1318 1318 a, g dbSNP:111314883
1341 1341 a, g dbSNP:186269003
1404 1404 a, g dbSNP:541379390
1438 1438 a, g dbSNP:758056229
1505 1505 a, g dbSNP:577207716
1507 1507 c, g dbSNP:78960250
1517 1517 a, g dbSNP:543037135
1529 1529 c, g dbSNP:773752895
1532 1532 -, tgggag dbSNP:772488638
1590 1590 g, t dbSNP:75195145
1612 1612 a, g dbSNP:554342936

Target ORF information:

RefSeq Version XM_011518521
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens LIM homeobox 6 (LHX6), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_011518521

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
ATGTACTGGA AGCATGAGAA CGCCGCCCCG GCGTTGCCCG AGGGCTGCCG GCTGCCGGCC 
GAGGGCGGCC CCGCCACCGA CCAGGTGATG GCCCAGCCAG GGTCCGGCTG CAAAGCGACC
ACCCGCTGTC TTGAAGGGAC CGCGCCGCCC GCCATGGCTC AGTCTGACGC CGAGGCCCTG
GCAGGAGCTC TGGACAAGGA CGAGGGTCAG GCCTCCCCAT GTACGCCCAG CACGCCATCT
GTCTGCTCAC CGCCCTCTGC CGCCTCCTCC GTGCCGTCTG CAGGCAAGAA CATCTGCTCC
AGCTGCGGCC TCGAGATCCT GGACCGATAT CTGCTCAAGG TCAACAACCT CATCTGGCAC
GTGCGGTGCC TCGAGTGCTC CGTGTGTCGC ACGTCGCTGA GGCAGCAGAA CAGCTGCTAC
ATCAAGAACA AGGAGATCTT CTGCAAGATG GACTACTTCA GCCGATTCGG GACCAAGTGT
GCCCGGTGCG GCCGACAGAT CTACGCCAGC GACTGGGTGC GGAGAGCTCG CGGCAACGCC
TACCACCTGG CCTGCTTCGC CTGCTTCTCG TGCAAGCGCC AGCTGTCCAC TGGTGAGGAG
TTCGGCCTGG TCGAGGAGAA GGTGCTCTGC CGCATCCACT ACGACACCAT GATTGAGAAC
CTCAAGAGGG CCGCCGAGAA CGGGAACGGC CTCACGTTGG AGGGGGCAGT GCCCTCGGAA
CAGGACAGTC AACCCAAGCC GGCCAAGCGC GCGCGGACGT CCTTCACCGC GGAACAGCTG
CAGGTTATGC AGGCGCAGTT CGCGCAGGAC AACAACCCCG ACGCTCAGAC GCTGCAGAAG
CTGGCGGACA TGACGGGCCT CAGCCGGAGA GTCATCCAGG TGTGGTTTCA AAACTGCCGG
GCGCGTCATA AAAAGCACAC GCCGCAACAC CCAGTGCCGC CCTCGGGGGC GCCCCCGTCC
CGCCTTCCCT CCGCCCTGTC CGACGACATC CACTACACCC CGTTCAGCAG CCCCGAGCGG
GCGCGCATGG TCACCCTGCA CGGCTACATT GAGACAAATG CGCGTCTGCT GGCAGGGATG
TGTGATTGGT GCGGGCATTT GATTTGGCAG TTACAGCGTA TTATCCCTCC ACAAAGCCTT
CATTACGGTG CTGCTAACAA CACCGCAGAT AAAGCATGGA TGTCCCCGCG TGCCAGCCTC
CAGGTGATTA TAACATTTCG GTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu66928
Accession Version XM_011518522.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1137bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector Document: User manual_GenEZ ORF Clone Products.pdf (pdf)
Clone information Clone Map
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags Document: MSDS_GenEZ ORF Clone Products.pdf (pdf)
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product LIM/homeobox protein Lhx6 isoform X2
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_008470.20) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
ATGGCCCAGC CAGGGTCCGG CTGCAAAGCG ACCACCCGCT GTCTTGAAGG GACCGCGCCG 
CCCGCCATGG CTCAGTCTGA CGCCGAGGCC CTGGCAGGAG CTCTGGACAA GGACGAGGGT
CAGGCCTCCC CATGTACGCC CAGCACGCCA TCTGTCTGCT CACCGCCCTC TGCCGCCTCC
TCCGTGCCGT CTGCAGGCAA GAACATCTGC TCCAGCTGCG GCCTCGAGAT CCTGGACCGA
TATCTGCTCA AGGTCAACAA CCTCATCTGG CACGTGCGGT GCCTCGAGTG CTCCGTGTGT
CGCACGTCGC TGAGGCAGCA GAACAGCTGC TACATCAAGA ACAAGGAGAT CTTCTGCAAG
ATGGACTACT TCAGCCGATT CGGGACCAAG TGTGCCCGGT GCGGCCGACA GATCTACGCC
AGCGACTGGG TGCGGAGAGC TCGCGGCAAC GCCTACCACC TGGCCTGCTT CGCCTGCTTC
TCGTGCAAGC GCCAGCTGTC CACTGGTGAG GAGTTCGGCC TGGTCGAGGA GAAGGTGCTC
TGCCGCATCC ACTACGACAC CATGATTGAG AACCTCAAGA GGGCCGCCGA GAACGGGAAC
GGCCTCACGT TGGAGGGGGC AGTGCCCTCG GAACAGGACA GTCAACCCAA GCCGGCCAAG
CGCGCGCGGA CGTCCTTCAC CGCGGAACAG CTGCAGGTTA TGCAGGCGCA GTTCGCGCAG
GACAACAACC CCGACGCTCA GACGCTGCAG AAGCTGGCGG ACATGACGGG CCTCAGCCGG
AGAGTCATCC AGGTGTGGTT TCAAAACTGC CGGGCGCGTC ATAAAAAGCA CACGCCGCAA
CACCCAGTGC CGCCCTCGGG GGCGCCCCCG TCCCGCCTTC CCTCCGCCCT GTCCGACGAC
ATCCACTACA CCCCGTTCAG CAGCCCCGAG CGGGCGCGCA TGGTCACCCT GCACGGCTAC
ATTGAGACAA ATGCGCGTCT GCTGGCAGGG ATGTGTGATT GGTGCGGGCA TTTGATTTGG
CAGTTACAGC GTATTATCCC TCCACAAAGC CTTCATTACG GTGCTGCTAA CAACACCGCA
GATAAAGCAT GGATGTCCCC GCGTGCCAGC CTCCAGGTGA TTATAACATT TCGGTAA
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeqXP_011516824.1
CDS509..1645
Misc Feature(1)716..877(+)
Misc Feature(2)716..874(+)
Misc Feature(3)899..1063(+)
Misc Feature(4)899..1060(+)
Misc Feature(5)1166..1339(+)
Misc Feature(6)1166..1336(+)
Misc Feature(7)1172..1324(+)
Translation
Position Chain Variation Link
16 16 c, g dbSNP:772023670
26 26 -, g dbSNP:769143924
119 119 c, t dbSNP:539552682
215 215 g, t dbSNP:367811210
327 327 a, g dbSNP:569292469
347 347 c, g dbSNP:376253564
514 514 a, c dbSNP:752172261
515 515 c, g dbSNP:766793975
527 527 c, g dbSNP:368987512
545 545 c, g dbSNP:753262130
570 570 c, t dbSNP:763826373
623 623 c, g dbSNP:770060170
641 641 c, t dbSNP:748326948
647 647 a, c dbSNP:781554821
658 658 a, g dbSNP:755464037
670 670 a, c dbSNP:747349715
681 681 c, t dbSNP:780658108
682 682 c, t dbSNP:138880738
692 692 g, t dbSNP:753416011
698 698 c, t dbSNP:368544328
720 720 c, g dbSNP:764112046
733 733 c, g dbSNP:114083078
745 745 a, c dbSNP:185007094
769 769 a, c dbSNP:774057122
781 781 c, t dbSNP:368399322
782 782 g, t dbSNP:762036833
784 784 a, g dbSNP:776800689
787 787 a, g dbSNP:546749513
793 793 c, g dbSNP:769028128
802 802 c, g dbSNP:760908427
817 817 a, g dbSNP:150186287
822 822 a, g dbSNP:772377957
832 832 c, g dbSNP:572755316
844 844 c, t dbSNP:746238566
870 870 c, t dbSNP:114142278
880 880 c, t dbSNP:771379752
886 886 a, t dbSNP:753881753
898 898 a, g dbSNP:764121568
905 905 a, c dbSNP:756354677
919 919 g, t dbSNP:565893915
925 925 c, t dbSNP:756188084
940 940 g, t dbSNP:752798437
967 967 c, t dbSNP:767665614
973 973 c, t dbSNP:369599249
979 979 c, t dbSNP:116345380
985 985 c, t dbSNP:766789049
997 997 a, g dbSNP:141830577
1012 1012 c, t dbSNP:748394379
1024 1024 c, t dbSNP:770315479
1027 1027 a, c dbSNP:746525707
1028 1028 c, t dbSNP:201468383
1057 1057 c, g dbSNP:771625399
1069 1069 c, t dbSNP:745463090
1073 1073 a, g dbSNP:201011938
1081 1081 c, t dbSNP:778691163
1084 1084 a, c dbSNP:757184088
1089 1089 a, g dbSNP:749060535
1091 1091 a, g dbSNP:781352243
1093 1093 c, t dbSNP:777904963
1096 1096 c, g, t dbSNP:752726361
1115 1115 a, g dbSNP:756959110
1117 1117 a, g dbSNP:148096760
1125 1125 a, g dbSNP:748176324
1138 1138 g, t dbSNP:780988976
1143 1143 a, g dbSNP:200081104
1162 1162 c, g dbSNP:755129234
1169 1169 c, g dbSNP:751619203
1180 1180 a, c, g dbSNP:758583063
1190 1190 a, g dbSNP:141012050
1192 1192 c, g dbSNP:566259981
1209 1209 c, t dbSNP:778214950
1216 1216 a, g dbSNP:756534518
1223 1223 a, g dbSNP:753322621
1225 1225 g, t dbSNP:768108756
1252 1252 a, g dbSNP:758032415
1267 1267 g, t dbSNP:749855769
1271 1271 a, c, g dbSNP:761309017
1272 1272 a, t dbSNP:776502085
1275 1275 c, t dbSNP:763932135
1277 1277 g, t dbSNP:760455304
1288 1288 c, g dbSNP:775443266
1315 1315 c, t dbSNP:748826406
1345 1345 a, g dbSNP:777196788
1352 1352 c, t dbSNP:755776987
1359 1359 a, c dbSNP:142314211
1366 1366 c, g dbSNP:11789619
1371 1371 c, g dbSNP:113280031
1378 1378 a, g, t dbSNP:566096736
1390 1390 c, g dbSNP:751320966
1393 1393 c, t dbSNP:373399550
1395 1395 c, t dbSNP:758346959
1396 1396 a, c dbSNP:750546801
1397 1397 c, g dbSNP:765474854
1404 1404 a, g dbSNP:761983883
1405 1405 c, g dbSNP:776753440
1407 1407 a, c dbSNP:764350949
1410 1410 a, g, t dbSNP:775881165
1411 1411 a, c dbSNP:772460631
1413 1413 a, g dbSNP:746314669
1422 1422 c, g dbSNP:774825314
1433 1433 c, t dbSNP:769359783
1435 1435 c, t dbSNP:747634996
1448 1448 a, g dbSNP:780731428
1449 1449 c, t dbSNP:375958601
1465 1465 c, t dbSNP:746787054
1466 1466 c, t dbSNP:779843806
1485 1485 a, g dbSNP:754771734
1539 1539 a, g dbSNP:138994692
1567 1567 c, t dbSNP:12002406
1584 1584 c, t dbSNP:765970696
1585 1585 c, t dbSNP:372343730
1586 1586 a, g dbSNP:111314883
1609 1609 a, g dbSNP:186269003
1672 1672 a, g dbSNP:541379390
1706 1706 a, g dbSNP:758056229
1773 1773 a, g dbSNP:577207716
1775 1775 c, g dbSNP:78960250
1785 1785 a, g dbSNP:543037135
1797 1797 c, g dbSNP:773752895
1800 1800 -, tgggag dbSNP:772488638
1858 1858 g, t dbSNP:75195145
1880 1880 a, g dbSNP:554342936

Target ORF information:

RefSeq Version XM_011518522
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens LIM homeobox 6 (LHX6), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_011518522

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
ATGGCCCAGC CAGGGTCCGG CTGCAAAGCG ACCACCCGCT GTCTTGAAGG GACCGCGCCG 
CCCGCCATGG CTCAGTCTGA CGCCGAGGCC CTGGCAGGAG CTCTGGACAA GGACGAGGGT
CAGGCCTCCC CATGTACGCC CAGCACGCCA TCTGTCTGCT CACCGCCCTC TGCCGCCTCC
TCCGTGCCGT CTGCAGGCAA GAACATCTGC TCCAGCTGCG GCCTCGAGAT CCTGGACCGA
TATCTGCTCA AGGTCAACAA CCTCATCTGG CACGTGCGGT GCCTCGAGTG CTCCGTGTGT
CGCACGTCGC TGAGGCAGCA GAACAGCTGC TACATCAAGA ACAAGGAGAT CTTCTGCAAG
ATGGACTACT TCAGCCGATT CGGGACCAAG TGTGCCCGGT GCGGCCGACA GATCTACGCC
AGCGACTGGG TGCGGAGAGC TCGCGGCAAC GCCTACCACC TGGCCTGCTT CGCCTGCTTC
TCGTGCAAGC GCCAGCTGTC CACTGGTGAG GAGTTCGGCC TGGTCGAGGA GAAGGTGCTC
TGCCGCATCC ACTACGACAC CATGATTGAG AACCTCAAGA GGGCCGCCGA GAACGGGAAC
GGCCTCACGT TGGAGGGGGC AGTGCCCTCG GAACAGGACA GTCAACCCAA GCCGGCCAAG
CGCGCGCGGA CGTCCTTCAC CGCGGAACAG CTGCAGGTTA TGCAGGCGCA GTTCGCGCAG
GACAACAACC CCGACGCTCA GACGCTGCAG AAGCTGGCGG ACATGACGGG CCTCAGCCGG
AGAGTCATCC AGGTGTGGTT TCAAAACTGC CGGGCGCGTC ATAAAAAGCA CACGCCGCAA
CACCCAGTGC CGCCCTCGGG GGCGCCCCCG TCCCGCCTTC CCTCCGCCCT GTCCGACGAC
ATCCACTACA CCCCGTTCAG CAGCCCCGAG CGGGCGCGCA TGGTCACCCT GCACGGCTAC
ATTGAGACAA ATGCGCGTCT GCTGGCAGGG ATGTGTGATT GGTGCGGGCA TTTGATTTGG
CAGTTACAGC GTATTATCCC TCCACAAAGC CTTCATTACG GTGCTGCTAA CAACACCGCA
GATAAAGCAT GGATGTCCCC GCGTGCCAGC CTCCAGGTGA TTATAACATT TCGGTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu66929
Accession Version XM_011518523.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1134bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector Document: User manual_GenEZ ORF Clone Products.pdf (pdf)
Clone information Clone Map
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags Document: MSDS_GenEZ ORF Clone Products.pdf (pdf)
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product LIM/homeobox protein Lhx6 isoform X3
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_008470.20) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
ATGTACTGGA AGCATGAGAA CGCCGCCCCG GCGTTGCCCG AGGGCTGCCG GCTGCCGGCC 
GAGGGCGGCC CCGCCACCGA CCAGGTGATG GCCCAGCCAG GGTCCGGCTG CAAAGCGACC
ACCCGCTGTC TTGAAGGGAC CGCGCCGCCC GCCATGGCTC AGTCTGACGC CGAGGCCCTG
GCAGGAGCTC TGGACAAGGA CGAGGGTCAG GCCTCCCCAT GTACGCCCAG CACGCCATCT
GTCTGCTCAC CGCCCTCTGC CGCCTCCTCC GTGCCGTCTG CAGGCAAGAA CATCTGCTCC
AGCTGCGGCC TCGAGATCCT GGACCGATAT CTGCTCAAGG TCAACAACCT CATCTGGCAC
GTGCGGTGCC TCGAGTGCTC CGTGTGTCGC ACGTCGCTGA GGCAGCAGAA CAGCTGCTAC
ATCAAGAACA AGGAGATCTT CTGCAAGATG GACTACTTCA GCCGATTCGG GACCAAGTGT
GCCCGGTGCG GCCGACAGAT CTACGCCAGC GACTGGGTGC GGAGAGCTCG CGGCAACGCC
TACCACCTGG CCTGCTTCGC CTGCTTCTCG TGCAAGCGCC AGCTGTCCAC TGGTGAGGAG
TTCGGCCTGG TCGAGGAGAA GGTGCTCTGC CGCATCCACT ACGACACCAT GATTGAGAAC
CTCAAGAGGG CCGCCGAGAA CGGGAACGGC CTCACGTTGG AGGGGGCAGT GCCCTCGGAA
CAGGACAGTC AACCCAAGCC GGCCAAGCGC GCGCGGACGT CCTTCACCGC GGAACAGCTG
CAGGTTATGC AGGCGCAGTT CGCGCAGGAC AACAACCCCG ACGCTCAGAC GCTGCAGAAG
CTGGCGGACA TGACGGGCCT CAGCCGGAGA GTCATCCAGG TGTGGTTTCA AAACTGCCGG
GCGCGTCATA AAAAGCACAC GCCGCAACAC CCAGTGCCGC CCTCGGGGGC GCCCCCGTCC
CGCCTTCCCT CCGCCCTGTC CGACGACATC CACTACACCC CGTTCAGCAG CCCCGAGCGG
GCGCGCATGG TCACCCTGCA CGGCTACATT GAGAGCCTTT CAGTGGGGAA CGGAGAGGGG
CAGGAGCTCG CCGCTGTGCC TGAAAGCCCT AAACGCAGTG TCTCCTTAGT TTAA
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeqXP_011516825.1
CDS154..1287
Misc Feature(1)448..609(+)
Misc Feature(2)448..606(+)
Misc Feature(3)631..795(+)
Misc Feature(4)631..792(+)
Misc Feature(5)898..1071(+)
Misc Feature(6)898..1068(+)
Misc Feature(7)904..1056(+)
Translation
Position Chain Variation Link
8 8 g, t dbSNP:527309936
141 141 a, g dbSNP:375357673
148 148 c, t dbSNP:780004247
181 181 c, t dbSNP:542907528
186 186 c, g dbSNP:745966328
193 193 a, g dbSNP:533000903
209 209 c, g dbSNP:757424954
210 210 a, g dbSNP:754032975
213 213 c, g dbSNP:777842782
214 214 a, g dbSNP:756543417
220 220 g, t dbSNP:752983974
225 225 a, c, g dbSNP:760080455
246 246 a, c dbSNP:752172261
247 247 c, g dbSNP:766793975
259 259 c, g dbSNP:368987512
277 277 c, g dbSNP:753262130
302 302 c, t dbSNP:763826373
355 355 c, g dbSNP:770060170
373 373 c, t dbSNP:748326948
379 379 a, c dbSNP:781554821
390 390 a, g dbSNP:755464037
402 402 a, c dbSNP:747349715
413 413 c, t dbSNP:780658108
414 414 c, t dbSNP:138880738
424 424 g, t dbSNP:753416011
430 430 c, t dbSNP:368544328
452 452 c, g dbSNP:764112046
465 465 c, g dbSNP:114083078
477 477 a, c dbSNP:185007094
501 501 a, c dbSNP:774057122
513 513 c, t dbSNP:368399322
514 514 g, t dbSNP:762036833
516 516 a, g dbSNP:776800689
519 519 a, g dbSNP:546749513
525 525 c, g dbSNP:769028128
534 534 c, g dbSNP:760908427
549 549 a, g dbSNP:150186287
554 554 a, g dbSNP:772377957
564 564 c, g dbSNP:572755316
576 576 c, t dbSNP:746238566
602 602 c, t dbSNP:114142278
612 612 c, t dbSNP:771379752
618 618 a, t dbSNP:753881753
630 630 a, g dbSNP:764121568
637 637 a, c dbSNP:756354677
651 651 g, t dbSNP:565893915
657 657 c, t dbSNP:756188084
672 672 g, t dbSNP:752798437
699 699 c, t dbSNP:767665614
705 705 c, t dbSNP:369599249
711 711 c, t dbSNP:116345380
717 717 c, t dbSNP:766789049
729 729 a, g dbSNP:141830577
744 744 c, t dbSNP:748394379
756 756 c, t dbSNP:770315479
759 759 a, c dbSNP:746525707
760 760 c, t dbSNP:201468383
789 789 c, g dbSNP:771625399
801 801 c, t dbSNP:745463090
805 805 a, g dbSNP:201011938
813 813 c, t dbSNP:778691163
816 816 a, c dbSNP:757184088
821 821 a, g dbSNP:749060535
823 823 a, g dbSNP:781352243
825 825 c, t dbSNP:777904963
828 828 c, g, t dbSNP:752726361
847 847 a, g dbSNP:756959110
849 849 a, g dbSNP:148096760
857 857 a, g dbSNP:748176324
870 870 g, t dbSNP:780988976
875 875 a, g dbSNP:200081104
894 894 c, g dbSNP:755129234
901 901 c, g dbSNP:751619203
912 912 a, c, g dbSNP:758583063
922 922 a, g dbSNP:141012050
924 924 c, g dbSNP:566259981
941 941 c, t dbSNP:778214950
948 948 a, g dbSNP:756534518
955 955 a, g dbSNP:753322621
957 957 g, t dbSNP:768108756
984 984 a, g dbSNP:758032415
999 999 g, t dbSNP:749855769
1003 1003 a, c, g dbSNP:761309017
1004 1004 a, t dbSNP:776502085
1007 1007 c, t dbSNP:763932135
1009 1009 g, t dbSNP:760455304
1020 1020 c, g dbSNP:775443266
1047 1047 c, t dbSNP:748826406
1077 1077 a, g dbSNP:777196788
1084 1084 c, t dbSNP:755776987
1091 1091 a, c dbSNP:142314211
1098 1098 c, g dbSNP:11789619
1103 1103 c, g dbSNP:113280031
1110 1110 a, g, t dbSNP:566096736
1122 1122 c, g dbSNP:751320966
1125 1125 c, t dbSNP:373399550
1127 1127 c, t dbSNP:758346959
1128 1128 a, c dbSNP:750546801
1129 1129 c, g dbSNP:765474854
1136 1136 a, g dbSNP:761983883
1137 1137 c, g dbSNP:776753440
1139 1139 a, c dbSNP:764350949
1142 1142 a, g, t dbSNP:775881165
1143 1143 a, c dbSNP:772460631
1145 1145 a, g dbSNP:746314669
1154 1154 c, g dbSNP:774825314
1165 1165 c, t dbSNP:769359783
1167 1167 c, t dbSNP:747634996
1180 1180 a, g dbSNP:780731428
1181 1181 c, t dbSNP:375958601
1197 1197 c, t dbSNP:746787054
1198 1198 c, t dbSNP:779843806
1225 1225 a, g dbSNP:757640214
1245 1245 c, t dbSNP:754435942
1293 1293 a, c, g dbSNP:111762068
1327 1327 c, t dbSNP:553377570
1331 1331 c, t dbSNP:62574049
1352 1352 c, t dbSNP:752889047
1363 1363 c, t dbSNP:146577566
1374 1374 c, t dbSNP:771038148
1395 1395 c, t dbSNP:774327745
1404 1404 c, g dbSNP:559013415
1412 1412 a, t dbSNP:537188302
1426 1426 a, g dbSNP:144247943
1448 1448 a, g dbSNP:377280960
1487 1487 a, g dbSNP:79029278
1495 1495 c, t dbSNP:535254636
1535 1535 a, g dbSNP:568357597
1584 1584 c, g dbSNP:368782107
1585 1585 c, t dbSNP:913935
1589 1589 a, c dbSNP:114536002
1603 1603 c, t dbSNP:139608708
1605 1605 g, t dbSNP:766481662
1610 1610 a, g dbSNP:552143673
1624 1624 c, g dbSNP:761648162

Target ORF information:

RefSeq Version XM_011518523
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens LIM homeobox 6 (LHX6), transcript variant X3, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_011518523

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
ATGTACTGGA AGCATGAGAA CGCCGCCCCG GCGTTGCCCG AGGGCTGCCG GCTGCCGGCC 
GAGGGCGGCC CCGCCACCGA CCAGGTGATG GCCCAGCCAG GGTCCGGCTG CAAAGCGACC
ACCCGCTGTC TTGAAGGGAC CGCGCCGCCC GCCATGGCTC AGTCTGACGC CGAGGCCCTG
GCAGGAGCTC TGGACAAGGA CGAGGGTCAG GCCTCCCCAT GTACGCCCAG CACGCCATCT
GTCTGCTCAC CGCCCTCTGC CGCCTCCTCC GTGCCGTCTG CAGGCAAGAA CATCTGCTCC
AGCTGCGGCC TCGAGATCCT GGACCGATAT CTGCTCAAGG TCAACAACCT CATCTGGCAC
GTGCGGTGCC TCGAGTGCTC CGTGTGTCGC ACGTCGCTGA GGCAGCAGAA CAGCTGCTAC
ATCAAGAACA AGGAGATCTT CTGCAAGATG GACTACTTCA GCCGATTCGG GACCAAGTGT
GCCCGGTGCG GCCGACAGAT CTACGCCAGC GACTGGGTGC GGAGAGCTCG CGGCAACGCC
TACCACCTGG CCTGCTTCGC CTGCTTCTCG TGCAAGCGCC AGCTGTCCAC TGGTGAGGAG
TTCGGCCTGG TCGAGGAGAA GGTGCTCTGC CGCATCCACT ACGACACCAT GATTGAGAAC
CTCAAGAGGG CCGCCGAGAA CGGGAACGGC CTCACGTTGG AGGGGGCAGT GCCCTCGGAA
CAGGACAGTC AACCCAAGCC GGCCAAGCGC GCGCGGACGT CCTTCACCGC GGAACAGCTG
CAGGTTATGC AGGCGCAGTT CGCGCAGGAC AACAACCCCG ACGCTCAGAC GCTGCAGAAG
CTGGCGGACA TGACGGGCCT CAGCCGGAGA GTCATCCAGG TGTGGTTTCA AAACTGCCGG
GCGCGTCATA AAAAGCACAC GCCGCAACAC CCAGTGCCGC CCTCGGGGGC GCCCCCGTCC
CGCCTTCCCT CCGCCCTGTC CGACGACATC CACTACACCC CGTTCAGCAG CCCCGAGCGG
GCGCGCATGG TCACCCTGCA CGGCTACATT GAGAGCCTTT CAGTGGGGAA CGGAGAGGGG
CAGGAGCTCG CCGCTGTGCC TGAAAGCCCT AAACGCAGTG TCTCCTTAGT TTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu43185
Accession Version XM_005251916.3 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 693bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector Document: User manual_GenEZ ORF Clone Products.pdf (pdf)
Clone information Clone Map
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags Document: MSDS_GenEZ ORF Clone Products.pdf (pdf)
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product LIM/homeobox protein Lhx6 isoform X4
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_008470.20) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 12, 2015 this sequence version replaced gi:578817321. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
ATGTACTGGA AGCATGAGAA CGCCGCCCCG GCGTTGCCCG AGGGCTGCCG GCTGCCGGCC 
GAGGGCGGCC CCGCCACCGA CCAGGTGATG GCCCAGCCAG GGTCCGGCTG CAAAGCGACC
ACCCGCTGTC TTGAAGGGAC CGCGCCGCCC GCCATGGCTC AGTCTGACGC CGAGGCCCTG
GCAGGAGCTC TGGACAAGGA CGAGGGTCAG GCCTCCCCAT GTACGCCCAG CACGCCATCT
GTCTGCTCAC CGCCCTCTGC CGCCTCCTCC GTGCCGTCTG CAGGCAAGAA CATCTGCTCC
AGCTGCGGCC TCGAGATCCT GGACCGATAT CTGCTCAAGG TCAACAACCT CATCTGGCAC
GTGCGGTGCC TCGAGTGCTC CGTGTGTCGC ACGTCGCTGA GGCAGCAGAA CAGCTGCTAC
ATCAAGAACA AGGAGATCTT CTGCAAGATG GACTACTTCA GCCGATTCGG GACCAAGTGT
GCCCGGTGCG GCCGACAGAT CTACGCCAGC GACTGGGTGC GGAGAGCTCG CGGCAACGCC
TACCACCTGG CCTGCTTCGC CTGCTTCTCG TGCAAGCGCC AGCTGTCCAC TGGTGAGGAG
TTCGGCCTGG TCGAGGAGAA GGTGCTCTGC CGCATCCACT ACGACACCAT GATTGAGAAC
CTCAAGAGGG CCGCCGAGAA CGGCTGCCAC TAG
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeqXP_005251973.1
CDS154..846
Misc Feature(1)448..609(+)
Misc Feature(2)448..606(+)
Misc Feature(3)631..795(+)
Misc Feature(4)631..792(+)
Translation
Position Chain Variation Link
8 8 g, t dbSNP:527309936
141 141 a, g dbSNP:375357673
148 148 c, t dbSNP:780004247
181 181 c, t dbSNP:542907528
186 186 c, g dbSNP:745966328
193 193 a, g dbSNP:533000903
209 209 c, g dbSNP:757424954
210 210 a, g dbSNP:754032975
213 213 c, g dbSNP:777842782
214 214 a, g dbSNP:756543417
220 220 g, t dbSNP:752983974
225 225 a, c, g dbSNP:760080455
246 246 a, c dbSNP:752172261
247 247 c, g dbSNP:766793975
259 259 c, g dbSNP:368987512
277 277 c, g dbSNP:753262130
302 302 c, t dbSNP:763826373
355 355 c, g dbSNP:770060170
373 373 c, t dbSNP:748326948
379 379 a, c dbSNP:781554821
390 390 a, g dbSNP:755464037
402 402 a, c dbSNP:747349715
413 413 c, t dbSNP:780658108
414 414 c, t dbSNP:138880738
424 424 g, t dbSNP:753416011
430 430 c, t dbSNP:368544328
452 452 c, g dbSNP:764112046
465 465 c, g dbSNP:114083078
477 477 a, c dbSNP:185007094
501 501 a, c dbSNP:774057122
513 513 c, t dbSNP:368399322
514 514 g, t dbSNP:762036833
516 516 a, g dbSNP:776800689
519 519 a, g dbSNP:546749513
525 525 c, g dbSNP:769028128
534 534 c, g dbSNP:760908427
549 549 a, g dbSNP:150186287
554 554 a, g dbSNP:772377957
564 564 c, g dbSNP:572755316
576 576 c, t dbSNP:746238566
602 602 c, t dbSNP:114142278
612 612 c, t dbSNP:771379752
618 618 a, t dbSNP:753881753
630 630 a, g dbSNP:764121568
637 637 a, c dbSNP:756354677
651 651 g, t dbSNP:565893915
657 657 c, t dbSNP:756188084
672 672 g, t dbSNP:752798437
699 699 c, t dbSNP:767665614
705 705 c, t dbSNP:369599249
711 711 c, t dbSNP:116345380
717 717 c, t dbSNP:766789049
729 729 a, g dbSNP:141830577
744 744 c, t dbSNP:748394379
756 756 c, t dbSNP:770315479
759 759 a, c dbSNP:746525707
760 760 c, t dbSNP:201468383
789 789 c, g dbSNP:771625399
801 801 c, t dbSNP:745463090
805 805 a, g dbSNP:201011938
813 813 c, t dbSNP:778691163
816 816 a, c dbSNP:757184088
821 821 a, g dbSNP:749060535
823 823 a, g dbSNP:781352243
825 825 c, t dbSNP:777904963
828 828 c, g, t dbSNP:752726361
840 840 c, t dbSNP:771666712
854 854 a, g dbSNP:759109852
855 855 c, g dbSNP:774186289
873 873 c, g dbSNP:770683861
874 874 c, t dbSNP:749116982
900 900 a, g dbSNP:756959110
902 902 a, g dbSNP:148096760
910 910 a, g dbSNP:748176324
923 923 g, t dbSNP:780988976

Target ORF information:

RefSeq Version XM_005251916
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens LIM homeobox 6 (LHX6), transcript variant X4, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_005251916

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
ATGTACTGGA AGCATGAGAA CGCCGCCCCG GCGTTGCCCG AGGGCTGCCG GCTGCCGGCC 
GAGGGCGGCC CCGCCACCGA CCAGGTGATG GCCCAGCCAG GGTCCGGCTG CAAAGCGACC
ACCCGCTGTC TTGAAGGGAC CGCGCCGCCC GCCATGGCTC AGTCTGACGC CGAGGCCCTG
GCAGGAGCTC TGGACAAGGA CGAGGGTCAG GCCTCCCCAT GTACGCCCAG CACGCCATCT
GTCTGCTCAC CGCCCTCTGC CGCCTCCTCC GTGCCGTCTG CAGGCAAGAA CATCTGCTCC
AGCTGCGGCC TCGAGATCCT GGACCGATAT CTGCTCAAGG TCAACAACCT CATCTGGCAC
GTGCGGTGCC TCGAGTGCTC CGTGTGTCGC ACGTCGCTGA GGCAGCAGAA CAGCTGCTAC
ATCAAGAACA AGGAGATCTT CTGCAAGATG GACTACTTCA GCCGATTCGG GACCAAGTGT
GCCCGGTGCG GCCGACAGAT CTACGCCAGC GACTGGGTGC GGAGAGCTCG CGGCAACGCC
TACCACCTGG CCTGCTTCGC CTGCTTCTCG TGCAAGCGCC AGCTGTCCAC TGGTGAGGAG
TTCGGCCTGG TCGAGGAGAA GGTGCTCTGC CGCATCCACT ACGACACCAT GATTGAGAAC
CTCAAGAGGG CCGCCGAGAA CGGCTGCCAC TAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu18448
Accession Version NM_014368.4 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1179bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector Document: User manual_GenEZ ORF Clone Products.pdf (pdf)
Clone information Clone Map
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags Document: MSDS_GenEZ ORF Clone Products.pdf (pdf)
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 15-MAR-2015
Organism Homo sapiens (human)
Product LIM/homeobox protein Lhx6 isoform 1
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AK299709.1, AK126982.1 and AI265821.1. This sequence is a reference standard in the RefSeqGene project. On May 27, 2011 this sequence version replaced gi:134284358. Summary: This gene encodes a member of a large protein family that contains the LIM domain, a unique cysteine-rich zinc-binding domain. The encoded protein may function as a transcriptional regulator and may be involved in the control of differentiation and development of neural and lymphoid cells. Two alternatively spliced transcript variants encoding distinct isoforms have been described for this gene. Alternatively spliced transcript variants have been identified, but their biological validity has not been determined. [provided by RefSeq, Jul 2008]. Transcript Variant: This variant (1) encodes the longest isoform (1). ##Evidence-Data-START## Transcript exon combination :: AL136570.1, BC103937.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2142680, SAMEA2148093 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
ATGTACTGGA AGCATGAGAA CGCCGCCCCG GCGTTGCCCG AGGGCTGCCG GCTGCCGGCC 
GAGGGCGGCC CCGCCACCGA CCAGGTGATG GCCCAGCCAG GGTCCGGCTG CAAAGCGACC
ACCCGCTGTC TTGAAGGGAC CGCGCCGCCC GCCATGGCTC AGTCTGACGC CGAGGCCCTG
GCAGGAGCTC TGGACAAGGA CGAGGGTCAG GCCTCCCCAT GTACGCCCAG CACGCCATCT
GTCTGCTCAC CGCCCTCTGC CGCCTCCTCC GTGCCGTCTG CAGGCAAGAA CATCTGCTCC
AGCTGCGGCC TCGAGATCCT GGACCGATAT CTGCTCAAGG TCAACAACCT CATCTGGCAC
GTGCGGTGCC TCGAGTGCTC CGTGTGTCGC ACGTCGCTGA GGCAGCAGAA CAGCTGCTAC
ATCAAGAACA AGGAGATCTT CTGCAAGATG GACTACTTCA GCCGATTCGG GACCAAGTGT
GCCCGGTGCG GCCGACAGAT CTACGCCAGC GACTGGGTGC GGAGAGCTCG CGGCAACGCC
TACCACCTGG CCTGCTTCGC CTGCTTCTCG TGCAAGCGCC AGCTGTCCAC TGGTGAGGAG
TTCGGCCTGG TCGAGGAGAA GGTGCTCTGC CGCATCCACT ACGACACCAT GATTGAGAAC
CTCAAGAGGG CCGCCGAGAA CGGGAACGGC CTCACGTTGG AGGGGGCAGT GCCCTCGGAA
CAGGACAGTC AACCCAAGCC GGCCAAGCGC GCGCGGACGT CCTTCACCGC GGAACAGCTG
CAGGTTATGC AGGCGCAGTT CGCGCAGGAC AACAACCCCG ACGCTCAGAC GCTGCAGAAG
CTGGCGGACA TGACGGGCCT CAGCCGGAGA GTCATCCAGG TGTGGTTTCA AAACTGCCGG
GCGCGTCATA AAAAGCACAC GCCGCAACAC CCAGTGCCGC CCTCGGGGGC GCCCCCGTCC
CGCCTTCCCT CCGCCCTGTC CGACGACATC CACTACACCC CGTTCAGCAG CCCCGAGCGG
GCGCGCATGG TCACCCTGCA CGGCTACATT GAGAGTCAGG TACAGTGCGG GCAGGTGCAC
TGCCGGCTGC CTTACACCGC ACCCCCCGTC CACCTCAAAG CCGATATGGA TGGGCCGCTC
TCCAACCGGG GTGAGAAGGT CATCCTTTTT CAGTACTAA
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeqNP_055183.2
CDS73..1251
Misc Feature(1)367..528(+)
Misc Feature(2)367..525(+)
Misc Feature(3)550..714(+)
Misc Feature(4)550..711(+)
Misc Feature(5)817..990(+)
Misc Feature(6)817..987(+)
Misc Feature(7)823..975(+)
Exon (1)1..156
Gene:LHX6
Gene Synonym:
Exon (2)157..228
Gene:LHX6
Gene Synonym:
Exon (3)229..411
Gene:LHX6
Gene Synonym:
Exon (4)412..533
Gene:LHX6
Gene Synonym:
Exon (5)534..754
Gene:LHX6
Gene Synonym:
Exon (6)755..855
Gene:LHX6
Gene Synonym:
Exon (7)856..951
Gene:LHX6
Gene Synonym:
Exon (8)952..1126
Gene:LHX6
Gene Synonym:
Exon (9)1127..1230
Gene:LHX6
Gene Synonym:
Exon (10)1231..3434
Gene:LHX6
Gene Synonym:
Translation
Position Chain Variation Link
60 60 a, g dbSNP:375357673
67 67 c, t dbSNP:780004247
100 100 c, t dbSNP:542907528
105 105 c, g dbSNP:745966328
112 112 a, g dbSNP:533000903
128 128 c, g dbSNP:757424954
129 129 a, g dbSNP:754032975
132 132 c, g dbSNP:777842782
133 133 a, g dbSNP:756543417
139 139 g, t dbSNP:752983974
144 144 a, c, g dbSNP:760080455
165 165 a, c dbSNP:752172261
166 166 c, g dbSNP:766793975
178 178 c, g dbSNP:368987512
196 196 c, g dbSNP:753262130
221 221 c, t dbSNP:763826373
274 274 c, g dbSNP:770060170
292 292 c, t dbSNP:748326948
298 298 a, c dbSNP:781554821
309 309 a, g dbSNP:755464037
321 321 a, c dbSNP:747349715
332 332 c, t dbSNP:780658108
333 333 c, t dbSNP:138880738
343 343 g, t dbSNP:753416011
349 349 c, t dbSNP:368544328
371 371 c, g dbSNP:764112046
384 384 c, g dbSNP:114083078
396 396 a, c dbSNP:185007094
420 420 a, c dbSNP:774057122
432 432 c, t dbSNP:368399322
433 433 g, t dbSNP:762036833
435 435 a, g dbSNP:776800689
438 438 a, g dbSNP:546749513
444 444 c, g dbSNP:769028128
453 453 c, g dbSNP:760908427
468 468 a, g dbSNP:150186287
473 473 a, g dbSNP:772377957
483 483 c, g dbSNP:572755316
495 495 c, t dbSNP:746238566
521 521 c, t dbSNP:114142278
531 531 c, t dbSNP:771379752
537 537 a, t dbSNP:753881753
549 549 a, g dbSNP:764121568
556 556 a, c dbSNP:756354677
570 570 g, t dbSNP:565893915
576 576 c, t dbSNP:756188084
591 591 g, t dbSNP:752798437
618 618 c, t dbSNP:767665614
624 624 c, t dbSNP:369599249
630 630 c, t dbSNP:116345380
636 636 c, t dbSNP:766789049
648 648 a, g dbSNP:141830577
663 663 c, t dbSNP:748394379
675 675 c, t dbSNP:770315479
678 678 a, c dbSNP:746525707
679 679 c, t dbSNP:201468383
708 708 c, g dbSNP:771625399
720 720 c, t dbSNP:745463090
724 724 a, g dbSNP:201011938
732 732 c, t dbSNP:778691163
735 735 a, c dbSNP:757184088
740 740 a, g dbSNP:749060535
742 742 a, g dbSNP:781352243
744 744 c, t dbSNP:777904963
747 747 c, g, t dbSNP:752726361
766 766 a, g dbSNP:756959110
768 768 a, g dbSNP:148096760
776 776 a, g dbSNP:748176324
789 789 g, t dbSNP:780988976
794 794 a, g dbSNP:200081104
813 813 c, g dbSNP:755129234
820 820 c, g dbSNP:751619203
831 831 a, c, g dbSNP:758583063
841 841 a, g dbSNP:141012050
843 843 c, g dbSNP:566259981
860 860 c, t dbSNP:778214950
867 867 a, g dbSNP:756534518
874 874 a, g dbSNP:753322621
876 876 g, t dbSNP:768108756
903 903 a, g dbSNP:758032415
918 918 g, t dbSNP:749855769
922 922 a, c, g dbSNP:761309017
923 923 a, t dbSNP:776502085
926 926 c, t dbSNP:763932135
928 928 g, t dbSNP:760455304
939 939 c, g dbSNP:775443266
966 966 c, t dbSNP:748826406
996 996 a, g dbSNP:777196788
1003 1003 c, t dbSNP:755776987
1010 1010 a, c dbSNP:142314211
1017 1017 c, g dbSNP:11789619
1022 1022 c, g dbSNP:113280031
1029 1029 a, g, t dbSNP:566096736
1041 1041 c, g dbSNP:751320966
1044 1044 c, t dbSNP:373399550
1046 1046 c, t dbSNP:758346959
1047 1047 a, c dbSNP:750546801
1048 1048 c, g dbSNP:765474854
1055 1055 a, g dbSNP:761983883
1056 1056 c, g dbSNP:776753440
1058 1058 a, c dbSNP:764350949
1061 1061 a, g, t dbSNP:775881165
1062 1062 a, c dbSNP:772460631
1064 1064 a, g dbSNP:746314669
1073 1073 c, g dbSNP:774825314
1084 1084 c, t dbSNP:769359783
1086 1086 c, t dbSNP:747634996
1099 1099 a, g dbSNP:780731428
1100 1100 c, t dbSNP:375958601
1116 1116 c, t dbSNP:746787054
1117 1117 c, t dbSNP:779843806
1132 1132 g, t dbSNP:745505125
1140 1140 c, t dbSNP:202183953
1141 1141 a, g dbSNP:373915153
1143 1143 a, g dbSNP:756132963
1152 1152 c, g dbSNP:547463991
1157 1157 a, g dbSNP:371503306
1158 1158 g, t dbSNP:759916051
1170 1170 c, t dbSNP:770537186
1171 1171 a, g dbSNP:766877341
1172 1172 c, t dbSNP:367663922
1174 1174 c, g dbSNP:773582289
1177 1177 a, c, g, t dbSNP:41273919
1178 1178 c, t dbSNP:771797999
1179 1179 a, c, g, t dbSNP:777365493
1180 1180 a, g dbSNP:771003127
1184 1184 a, c dbSNP:749304681
1185 1185 c, t dbSNP:777566727
1187 1187 a, t dbSNP:756257207
1194 1194 c, t dbSNP:752671229
1195 1195 a, g dbSNP:781424815
1196 1196 a, g dbSNP:200077245
1198 1198 a, g dbSNP:549579918
1200 1200 a, g dbSNP:531957865
1202 1202 a, g dbSNP:199844488
1204 1204 a, g dbSNP:758688851
1208 1208 c, t dbSNP:561275677
1209 1209 a, g dbSNP:765644564
1210 1210 a, c dbSNP:146076339
1212 1212 c, t dbSNP:775104521
1219 1219 c, t dbSNP:767286367
1220 1220 a, g, t dbSNP:774135453
1252 1252 c, t dbSNP:370814560
1253 1253 a, g, t dbSNP:11540516
1254 1254 c, t dbSNP:368168207
1258 1258 c, t dbSNP:748139868
1259 1259 a, g dbSNP:776544019
1261 1261 c, t dbSNP:537469731
1267 1267 c, t dbSNP:747066054
1268 1268 a, g, t dbSNP:374714258
1271 1271 c, t dbSNP:746252501
1277 1277 c, t dbSNP:779092541
1278 1278 a, g dbSNP:757630584
1283 1283 c, t dbSNP:754465240
1284 1284 a, g dbSNP:576331654
1285 1285 c, t dbSNP:370896775
1293 1293 c, t dbSNP:751064467
1295 1295 a, g dbSNP:766059909
1299 1299 c, t dbSNP:1065351
1300 1300 c, t dbSNP:762453660
1305 1305 c, t dbSNP:750075092
1306 1306 a, g dbSNP:377581457
1314 1314 c, t dbSNP:761563046
1321 1321 c, t dbSNP:776595541
1329 1329 c, t dbSNP:373668070
1330 1330 c, g dbSNP:760780193
1334 1334 a, c dbSNP:775368606
1340 1340 c, t dbSNP:760220548
1344 1344 c, t dbSNP:772355603
1348 1348 a, c dbSNP:746137540
1351 1351 c, t dbSNP:779194088
1352 1352 a, g dbSNP:771464673
1367 1367 c, t dbSNP:554648060
1391 1391 a, g dbSNP:536307841
1448 1448 c, t dbSNP:74370188
1455 1455 c, g dbSNP:546439326
1472 1472 c, t dbSNP:534499780
1476 1476 a, g dbSNP:371254182
1489 1489 c, t dbSNP:552150886
1492 1492 a, t dbSNP:191293623
1493 1493 a, g dbSNP:760500699
1535 1535 c, t dbSNP:563227502
1565 1565 a, g dbSNP:759978675
1585 1585 c, t dbSNP:78827082
1586 1586 a, g dbSNP:187853257
1619 1619 c, t dbSNP:559487193
1624 1624 c, t dbSNP:113235907
1704 1704 a, g dbSNP:574069441
1740 1740 c, g dbSNP:577333248
1742 1742 a, t dbSNP:565594336
1745 1745 c, t dbSNP:543712927
1759 1759 -, ta dbSNP:58532716
1760 1760 -, at dbSNP:10568818
1784 1784 c, g dbSNP:182728290
1841 1841 a, g dbSNP:3793617
1848 1848 c, t dbSNP:145835146
1852 1852 a, g dbSNP:572238142
1889 1889 g, t dbSNP:776899736
1907 1907 a, g dbSNP:553830896
1924 1924 a, t dbSNP:534831234
1949 1949 a, g dbSNP:190733724
1978 1978 a, g dbSNP:770983702
2005 2005 c, t dbSNP:552446731
2029 2029 c, t dbSNP:3750486
2038 2038 a, g dbSNP:530594773
2042 2042 a, g dbSNP:569955976
2117 2117 g, t dbSNP:548253864
2176 2176 a, g dbSNP:186265474
2186 2186 a, g dbSNP:777909019
2188 2188 a, g dbSNP:559505841
2205 2205 c, t dbSNP:547149567
2210 2210 a, g dbSNP:532744478
2213 2213 a, c dbSNP:565298105
2280 2280 g, t dbSNP:112237338
2292 2292 c, g dbSNP:769961542
2295 2295 a, g dbSNP:748197828
2351 2351 c, g, t dbSNP:543988171
2364 2364 g, t dbSNP:531930598
2396 2396 a, g dbSNP:149824889
2403 2403 c, t dbSNP:181437437
2404 2404 a, g dbSNP:558413348
2431 2431 a, c dbSNP:553873675
2434 2434 c, t dbSNP:545127186
2496 2496 a, g dbSNP:576979066
2502 2502 a, g dbSNP:772161755
2530 2530 c, g dbSNP:757099463
2587 2587 c, t dbSNP:116126639
2588 2588 a, g dbSNP:10985563
2596 2596 a, g dbSNP:139808718
2628 2628 a, g dbSNP:571065065
2657 2657 a, g dbSNP:760345182
2670 2670 a, g dbSNP:554870230
2694 2694 c, t dbSNP:752197643
2714 2714 c, t dbSNP:766944339
2735 2735 g, t dbSNP:760084124
2742 2742 a, g dbSNP:377359088
2812 2812 a, c dbSNP:536274625
2838 2838 c, t dbSNP:146087682
2840 2840 a, g dbSNP:367617466
2855 2855 a, c dbSNP:75374421
2873 2873 a, g dbSNP:144211662
2874 2874 a, c dbSNP:571314738
2965 2965 a, g dbSNP:778581577
2985 2985 c, g, t dbSNP:56092166
2986 2986 a, g dbSNP:554471050
3016 3016 a, g dbSNP:561264595
3033 3033 c, t dbSNP:542888720
3063 3063 c, t dbSNP:754740049
3107 3107 g, t dbSNP:763448997
3123 3123 c, t dbSNP:773741616
3168 3168 c, t dbSNP:770091433
3169 3169 a, g dbSNP:748332304
3230 3230 a, g dbSNP:190568182
3244 3244 c, g dbSNP:186921183
3256 3256 a, t dbSNP:545377153
3279 3279 -, a dbSNP:748615083
3296 3296 c, t dbSNP:578071695
3297 3297 a, c, g dbSNP:78509080
3299 3299 a, g dbSNP:75280874
3326 3326 a, t dbSNP:768681982
3353 3353 a, c, g dbSNP:79457316
3362 3362 c, t dbSNP:745801203
3433 3433 c, g dbSNP:541574885

Target ORF information:

RefSeq Version NM_014368
Organism Homo sapiens (human)
Definition Homo sapiens LIM homeobox 6 (LHX6), transcript variant 1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_014368

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
ATGTACTGGA AGCATGAGAA CGCCGCCCCG GCGTTGCCCG AGGGCTGCCG GCTGCCGGCC 
GAGGGCGGCC CCGCCACCGA CCAGGTGATG GCCCAGCCAG GGTCCGGCTG CAAAGCGACC
ACCCGCTGTC TTGAAGGGAC CGCGCCGCCC GCCATGGCTC AGTCTGACGC CGAGGCCCTG
GCAGGAGCTC TGGACAAGGA CGAGGGTCAG GCCTCCCCAT GTACGCCCAG CACGCCATCT
GTCTGCTCAC CGCCCTCTGC CGCCTCCTCC GTGCCGTCTG CAGGCAAGAA CATCTGCTCC
AGCTGCGGCC TCGAGATCCT GGACCGATAT CTGCTCAAGG TCAACAACCT CATCTGGCAC
GTGCGGTGCC TCGAGTGCTC CGTGTGTCGC ACGTCGCTGA GGCAGCAGAA CAGCTGCTAC
ATCAAGAACA AGGAGATCTT CTGCAAGATG GACTACTTCA GCCGATTCGG GACCAAGTGT
GCCCGGTGCG GCCGACAGAT CTACGCCAGC GACTGGGTGC GGAGAGCTCG CGGCAACGCC
TACCACCTGG CCTGCTTCGC CTGCTTCTCG TGCAAGCGCC AGCTGTCCAC TGGTGAGGAG
TTCGGCCTGG TCGAGGAGAA GGTGCTCTGC CGCATCCACT ACGACACCAT GATTGAGAAC
CTCAAGAGGG CCGCCGAGAA CGGGAACGGC CTCACGTTGG AGGGGGCAGT GCCCTCGGAA
CAGGACAGTC AACCCAAGCC GGCCAAGCGC GCGCGGACGT CCTTCACCGC GGAACAGCTG
CAGGTTATGC AGGCGCAGTT CGCGCAGGAC AACAACCCCG ACGCTCAGAC GCTGCAGAAG
CTGGCGGACA TGACGGGCCT CAGCCGGAGA GTCATCCAGG TGTGGTTTCA AAACTGCCGG
GCGCGTCATA AAAAGCACAC GCCGCAACAC CCAGTGCCGC CCTCGGGGGC GCCCCCGTCC
CGCCTTCCCT CCGCCCTGTC CGACGACATC CACTACACCC CGTTCAGCAG CCCCGAGCGG
GCGCGCATGG TCACCCTGCA CGGCTACATT GAGAGTCAGG TACAGTGCGG GCAGGTGCAC
TGCCGGCTGC CTTACACCGC ACCCCCCGTC CACCTCAAAG CCGATATGGA TGGGCCGCTC
TCCAACCGGG GTGAGAAGGT CATCCTTTTT CAGTACTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu11381
Accession Version NM_199160.3 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1134bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector Document: User manual_GenEZ ORF Clone Products.pdf (pdf)
Clone information Clone Map
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags Document: MSDS_GenEZ ORF Clone Products.pdf (pdf)
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 15-MAR-2015
Organism Homo sapiens (human)
Product LIM/homeobox protein Lhx6 isoform 2
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AK299709.1, BC103936.1, AK126982.1 and AI265821.1. On May 27, 2011 this sequence version replaced gi:134284360. Summary: This gene encodes a member of a large protein family that contains the LIM domain, a unique cysteine-rich zinc-binding domain. The encoded protein may function as a transcriptional regulator and may be involved in the control of differentiation and development of neural and lymphoid cells. Two alternatively spliced transcript variants encoding distinct isoforms have been described for this gene. Alternatively spliced transcript variants have been identified, but their biological validity has not been determined. [provided by RefSeq, Jul 2008]. Transcript Variant: This variant (2) lacks a segment in the coding region, which leads to a frameshift, compared to variant 1. The resulting isoform (2) contains a shorter and distinct C-terminus compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: BC103936.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2142680, SAMEA2154665 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
ATGTACTGGA AGCATGAGAA CGCCGCCCCG GCGTTGCCCG AGGGCTGCCG GCTGCCGGCC 
GAGGGCGGCC CCGCCACCGA CCAGGTGATG GCCCAGCCAG GGTCCGGCTG CAAAGCGACC
ACCCGCTGTC TTGAAGGGAC CGCGCCGCCC GCCATGGCTC AGTCTGACGC CGAGGCCCTG
GCAGGAGCTC TGGACAAGGA CGAGGGTCAG GCCTCCCCAT GTACGCCCAG CACGCCATCT
GTCTGCTCAC CGCCCTCTGC CGCCTCCTCC GTGCCGTCTG CAGGCAAGAA CATCTGCTCC
AGCTGCGGCC TCGAGATCCT GGACCGATAT CTGCTCAAGG TCAACAACCT CATCTGGCAC
GTGCGGTGCC TCGAGTGCTC CGTGTGTCGC ACGTCGCTGA GGCAGCAGAA CAGCTGCTAC
ATCAAGAACA AGGAGATCTT CTGCAAGATG GACTACTTCA GCCGATTCGG GACCAAGTGT
GCCCGGTGCG GCCGACAGAT CTACGCCAGC GACTGGGTGC GGAGAGCTCG CGGCAACGCC
TACCACCTGG CCTGCTTCGC CTGCTTCTCG TGCAAGCGCC AGCTGTCCAC TGGTGAGGAG
TTCGGCCTGG TCGAGGAGAA GGTGCTCTGC CGCATCCACT ACGACACCAT GATTGAGAAC
CTCAAGAGGG CCGCCGAGAA CGGGAACGGC CTCACGTTGG AGGGGGCAGT GCCCTCGGAA
CAGGACAGTC AACCCAAGCC GGCCAAGCGC GCGCGGACGT CCTTCACCGC GGAACAGCTG
CAGGTTATGC AGGCGCAGTT CGCGCAGGAC AACAACCCCG ACGCTCAGAC GCTGCAGAAG
CTGGCGGACA TGACGGGCCT CAGCCGGAGA GTCATCCAGG TGTGGTTTCA AAACTGCCGG
GCGCGTCATA AAAAGCACAC GCCGCAACAC CCAGTGCCGC CCTCGGGGGC GCCCCCGTCC
CGCCTTCCCT CCGCCCTGTC CGACGACATC CACTACACCC CGTTCAGCAG CCCCGAGCGG
GCGCGCATGG TCACCCTGCA CGGCTACATT GAGAGTCATC CTTTTTCAGT ACTAACGCTG
CCGGCACTTC CGCATCTGCC CGTGGGCGCC CCACAGCTGC CCCTCAGCCG CTGA
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeqNP_954629.2
CDS73..1206
Misc Feature(1)367..528(+)
Misc Feature(2)367..525(+)
Misc Feature(3)550..714(+)
Misc Feature(4)550..711(+)
Misc Feature(5)817..990(+)
Misc Feature(6)817..987(+)
Misc Feature(7)823..975(+)
Exon (1)1..156
Gene:LHX6
Gene Synonym:
Exon (2)157..228
Gene:LHX6
Gene Synonym:
Exon (3)229..411
Gene:LHX6
Gene Synonym:
Exon (4)412..533
Gene:LHX6
Gene Synonym:
Exon (5)534..754
Gene:LHX6
Gene Synonym:
Exon (6)755..855
Gene:LHX6
Gene Synonym:
Exon (7)856..951
Gene:LHX6
Gene Synonym:
Exon (8)952..1126
Gene:LHX6
Gene Synonym:
Exon (9)1127..3330
Gene:LHX6
Gene Synonym:
Translation
Position Chain Variation Link
60 60 a, g dbSNP:375357673
67 67 c, t dbSNP:780004247
100 100 c, t dbSNP:542907528
105 105 c, g dbSNP:745966328
112 112 a, g dbSNP:533000903
128 128 c, g dbSNP:757424954
129 129 a, g dbSNP:754032975
132 132 c, g dbSNP:777842782
133 133 a, g dbSNP:756543417
139 139 g, t dbSNP:752983974
144 144 a, c, g dbSNP:760080455
165 165 a, c dbSNP:752172261
166 166 c, g dbSNP:766793975
178 178 c, g dbSNP:368987512
196 196 c, g dbSNP:753262130
221 221 c, t dbSNP:763826373
274 274 c, g dbSNP:770060170
292 292 c, t dbSNP:748326948
298 298 a, c dbSNP:781554821
309 309 a, g dbSNP:755464037
321 321 a, c dbSNP:747349715
332 332 c, t dbSNP:780658108
333 333 c, t dbSNP:138880738
343 343 g, t dbSNP:753416011
349 349 c, t dbSNP:368544328
371 371 c, g dbSNP:764112046
384 384 c, g dbSNP:114083078
396 396 a, c dbSNP:185007094
420 420 a, c dbSNP:774057122
432 432 c, t dbSNP:368399322
433 433 g, t dbSNP:762036833
435 435 a, g dbSNP:776800689
438 438 a, g dbSNP:546749513
444 444 c, g dbSNP:769028128
453 453 c, g dbSNP:760908427
468 468 a, g dbSNP:150186287
473 473 a, g dbSNP:772377957
483 483 c, g dbSNP:572755316
495 495 c, t dbSNP:746238566
521 521 c, t dbSNP:114142278
531 531 c, t dbSNP:771379752
537 537 a, t dbSNP:753881753
549 549 a, g dbSNP:764121568
556 556 a, c dbSNP:756354677
570 570 g, t dbSNP:565893915
576 576 c, t dbSNP:756188084
591 591 g, t dbSNP:752798437
618 618 c, t dbSNP:767665614
624 624 c, t dbSNP:369599249
630 630 c, t dbSNP:116345380
636 636 c, t dbSNP:766789049
648 648 a, g dbSNP:141830577
663 663 c, t dbSNP:748394379
675 675 c, t dbSNP:770315479
678 678 a, c dbSNP:746525707
679 679 c, t dbSNP:201468383
708 708 c, g dbSNP:771625399
720 720 c, t dbSNP:745463090
724 724 a, g dbSNP:201011938
732 732 c, t dbSNP:778691163
735 735 a, c dbSNP:757184088
740 740 a, g dbSNP:749060535
742 742 a, g dbSNP:781352243
744 744 c, t dbSNP:777904963
747 747 c, g, t dbSNP:752726361
766 766 a, g dbSNP:756959110
768 768 a, g dbSNP:148096760
776 776 a, g dbSNP:748176324
789 789 g, t dbSNP:780988976
794 794 a, g dbSNP:200081104
813 813 c, g dbSNP:755129234
820 820 c, g dbSNP:751619203
831 831 a, c, g dbSNP:758583063
841 841 a, g dbSNP:141012050
843 843 c, g dbSNP:566259981
860 860 c, t dbSNP:778214950
867 867 a, g dbSNP:756534518
874 874 a, g dbSNP:753322621
876 876 g, t dbSNP:768108756
903 903 a, g dbSNP:758032415
918 918 g, t dbSNP:749855769
922 922 a, c, g dbSNP:761309017
923 923 a, t dbSNP:776502085
926 926 c, t dbSNP:763932135
928 928 g, t dbSNP:760455304
939 939 c, g dbSNP:775443266
966 966 c, t dbSNP:748826406
996 996 a, g dbSNP:777196788
1003 1003 c, t dbSNP:755776987
1010 1010 a, c dbSNP:142314211
1017 1017 c, g dbSNP:11789619
1022 1022 c, g dbSNP:113280031
1029 1029 a, g, t dbSNP:566096736
1041 1041 c, g dbSNP:751320966
1044 1044 c, t dbSNP:373399550
1046 1046 c, t dbSNP:758346959
1047 1047 a, c dbSNP:750546801
1048 1048 c, g dbSNP:765474854
1055 1055 a, g dbSNP:761983883
1056 1056 c, g dbSNP:776753440
1058 1058 a, c dbSNP:764350949
1061 1061 a, g, t dbSNP:775881165
1062 1062 a, c dbSNP:772460631
1064 1064 a, g dbSNP:746314669
1073 1073 c, g dbSNP:774825314
1084 1084 c, t dbSNP:769359783
1086 1086 c, t dbSNP:747634996
1099 1099 a, g dbSNP:780731428
1100 1100 c, t dbSNP:375958601
1116 1116 c, t dbSNP:746787054
1117 1117 c, t dbSNP:779843806
1148 1148 c, t dbSNP:370814560
1149 1149 a, g, t dbSNP:11540516
1150 1150 c, t dbSNP:368168207
1154 1154 c, t dbSNP:748139868
1155 1155 a, g dbSNP:776544019
1157 1157 c, t dbSNP:537469731
1163 1163 c, t dbSNP:747066054
1164 1164 a, g, t dbSNP:374714258
1167 1167 c, t dbSNP:746252501
1173 1173 c, t dbSNP:779092541
1174 1174 a, g dbSNP:757630584
1179 1179 c, t dbSNP:754465240
1180 1180 a, g dbSNP:576331654
1181 1181 c, t dbSNP:370896775
1189 1189 c, t dbSNP:751064467
1191 1191 a, g dbSNP:766059909
1195 1195 c, t dbSNP:1065351
1196 1196 c, t dbSNP:762453660
1201 1201 c, t dbSNP:750075092
1202 1202 a, g dbSNP:377581457
1210 1210 c, t dbSNP:761563046
1217 1217 c, t dbSNP:776595541
1225 1225 c, t dbSNP:373668070
1226 1226 c, g dbSNP:760780193
1230 1230 a, c dbSNP:775368606
1236 1236 c, t dbSNP:760220548
1240 1240 c, t dbSNP:772355603
1244 1244 a, c dbSNP:746137540
1247 1247 c, t dbSNP:779194088
1248 1248 a, g dbSNP:771464673
1263 1263 c, t dbSNP:554648060
1287 1287 a, g dbSNP:536307841
1344 1344 c, t dbSNP:74370188
1351 1351 c, g dbSNP:546439326
1368 1368 c, t dbSNP:534499780
1372 1372 a, g dbSNP:371254182
1385 1385 c, t dbSNP:552150886
1388 1388 a, t dbSNP:191293623
1389 1389 a, g dbSNP:760500699
1431 1431 c, t dbSNP:563227502
1461 1461 a, g dbSNP:759978675
1481 1481 c, t dbSNP:78827082
1482 1482 a, g dbSNP:187853257
1515 1515 c, t dbSNP:559487193
1520 1520 c, t dbSNP:113235907
1600 1600 a, g dbSNP:574069441
1636 1636 c, g dbSNP:577333248
1638 1638 a, t dbSNP:565594336
1641 1641 c, t dbSNP:543712927
1655 1655 -, ta dbSNP:58532716
1656 1656 -, at dbSNP:10568818
1680 1680 c, g dbSNP:182728290
1737 1737 a, g dbSNP:3793617
1744 1744 c, t dbSNP:145835146
1748 1748 a, g dbSNP:572238142
1785 1785 g, t dbSNP:776899736
1803 1803 a, g dbSNP:553830896
1820 1820 a, t dbSNP:534831234
1845 1845 a, g dbSNP:190733724
1874 1874 a, g dbSNP:770983702
1901 1901 c, t dbSNP:552446731
1925 1925 c, t dbSNP:3750486
1934 1934 a, g dbSNP:530594773
1938 1938 a, g dbSNP:569955976
2013 2013 g, t dbSNP:548253864
2072 2072 a, g dbSNP:186265474
2082 2082 a, g dbSNP:777909019
2084 2084 a, g dbSNP:559505841
2101 2101 c, t dbSNP:547149567
2106 2106 a, g dbSNP:532744478
2109 2109 a, c dbSNP:565298105
2176 2176 g, t dbSNP:112237338
2188 2188 c, g dbSNP:769961542
2191 2191 a, g dbSNP:748197828
2247 2247 c, g, t dbSNP:543988171
2260 2260 g, t dbSNP:531930598
2292 2292 a, g dbSNP:149824889
2299 2299 c, t dbSNP:181437437
2300 2300 a, g dbSNP:558413348
2327 2327 a, c dbSNP:553873675
2330 2330 c, t dbSNP:545127186
2392 2392 a, g dbSNP:576979066
2398 2398 a, g dbSNP:772161755
2426 2426 c, g dbSNP:757099463
2483 2483 c, t dbSNP:116126639
2484 2484 a, g dbSNP:10985563
2492 2492 a, g dbSNP:139808718
2524 2524 a, g dbSNP:571065065
2553 2553 a, g dbSNP:760345182
2566 2566 a, g dbSNP:554870230
2590 2590 c, t dbSNP:752197643
2610 2610 c, t dbSNP:766944339
2631 2631 g, t dbSNP:760084124
2638 2638 a, g dbSNP:377359088
2708 2708 a, c dbSNP:536274625
2734 2734 c, t dbSNP:146087682
2736 2736 a, g dbSNP:367617466
2751 2751 a, c dbSNP:75374421
2769 2769 a, g dbSNP:144211662
2770 2770 a, c dbSNP:571314738
2861 2861 a, g dbSNP:778581577
2881 2881 c, g, t dbSNP:56092166
2882 2882 a, g dbSNP:554471050
2912 2912 a, g dbSNP:561264595
2929 2929 c, t dbSNP:542888720
2959 2959 c, t dbSNP:754740049
3003 3003 g, t dbSNP:763448997
3019 3019 c, t dbSNP:773741616
3064 3064 c, t dbSNP:770091433
3065 3065 a, g dbSNP:748332304
3126 3126 a, g dbSNP:190568182
3140 3140 c, g dbSNP:186921183
3152 3152 a, t dbSNP:545377153
3175 3175 -, a dbSNP:748615083
3192 3192 c, t dbSNP:578071695
3193 3193 a, c, g dbSNP:78509080
3195 3195 a, g dbSNP:75280874
3222 3222 a, t dbSNP:768681982
3249 3249 a, c, g dbSNP:79457316
3258 3258 c, t dbSNP:745801203
3329 3329 c, g dbSNP:541574885

Target ORF information:

RefSeq Version NM_199160
Organism Homo sapiens (human)
Definition Homo sapiens LIM homeobox 6 (LHX6), transcript variant 2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_199160

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
ATGTACTGGA AGCATGAGAA CGCCGCCCCG GCGTTGCCCG AGGGCTGCCG GCTGCCGGCC 
GAGGGCGGCC CCGCCACCGA CCAGGTGATG GCCCAGCCAG GGTCCGGCTG CAAAGCGACC
ACCCGCTGTC TTGAAGGGAC CGCGCCGCCC GCCATGGCTC AGTCTGACGC CGAGGCCCTG
GCAGGAGCTC TGGACAAGGA CGAGGGTCAG GCCTCCCCAT GTACGCCCAG CACGCCATCT
GTCTGCTCAC CGCCCTCTGC CGCCTCCTCC GTGCCGTCTG CAGGCAAGAA CATCTGCTCC
AGCTGCGGCC TCGAGATCCT GGACCGATAT CTGCTCAAGG TCAACAACCT CATCTGGCAC
GTGCGGTGCC TCGAGTGCTC CGTGTGTCGC ACGTCGCTGA GGCAGCAGAA CAGCTGCTAC
ATCAAGAACA AGGAGATCTT CTGCAAGATG GACTACTTCA GCCGATTCGG GACCAAGTGT
GCCCGGTGCG GCCGACAGAT CTACGCCAGC GACTGGGTGC GGAGAGCTCG CGGCAACGCC
TACCACCTGG CCTGCTTCGC CTGCTTCTCG TGCAAGCGCC AGCTGTCCAC TGGTGAGGAG
TTCGGCCTGG TCGAGGAGAA GGTGCTCTGC CGCATCCACT ACGACACCAT GATTGAGAAC
CTCAAGAGGG CCGCCGAGAA CGGGAACGGC CTCACGTTGG AGGGGGCAGT GCCCTCGGAA
CAGGACAGTC AACCCAAGCC GGCCAAGCGC GCGCGGACGT CCTTCACCGC GGAACAGCTG
CAGGTTATGC AGGCGCAGTT CGCGCAGGAC AACAACCCCG ACGCTCAGAC GCTGCAGAAG
CTGGCGGACA TGACGGGCCT CAGCCGGAGA GTCATCCAGG TGTGGTTTCA AAACTGCCGG
GCGCGTCATA AAAAGCACAC GCCGCAACAC CCAGTGCCGC CCTCGGGGGC GCCCCCGTCC
CGCCTTCCCT CCGCCCTGTC CGACGACATC CACTACACCC CGTTCAGCAG CCCCGAGCGG
GCGCGCATGG TCACCCTGCA CGGCTACATT GAGAGTCATC CTTTTTCAGT ACTAACGCTG
CCGGCACTTC CGCATCTGCC CGTGGGCGCC CCACAGCTGC CCCTCAGCCG CTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu11300
Accession Version NM_001242333.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1101bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector Document: User manual_GenEZ ORF Clone Products.pdf (pdf)
Clone information Clone Map
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags Document: MSDS_GenEZ ORF Clone Products.pdf (pdf)
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 15-MAR-2015
Organism Homo sapiens (human)
Product LIM/homeobox protein Lhx6 isoform 3
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AK297175.1, BC103936.1, AK126982.1 and AI265821.1. Summary: This gene encodes a member of a large protein family that contains the LIM domain, a unique cysteine-rich zinc-binding domain. The encoded protein may function as a transcriptional regulator and may be involved in the control of differentiation and development of neural and lymphoid cells. Two alternatively spliced transcript variants encoding distinct isoforms have been described for this gene. Alternatively spliced transcript variants have been identified, but their biological validity has not been determined. [provided by RefSeq, Jul 2008]. Transcript Variant: This variant (3) differs in the 5' UTR and coding sequence and lacks a segment in the coding region, which leads to a frameshift, compared to variant 1. The resulting isoform (3) has shorter and distinct N- and C- termini compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: AK297175.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1968968, SAMEA2142680 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
ATGCGCCGGG GGTTGTGCCG GCGCAGCGCT GAGAATCCCG ACGCGGGGCC GGTGATGGCC 
CAGCCAGGGT CCGGCTGCAA AGCGACCACC CGCTGTCTTG AAGGGACCGC GCCGCCCGCC
ATGGCTCAGT CTGACGCCGA GGCCCTGGCA GGAGCTCTGG ACAAGGACGA GGGTCAGGCC
TCCCCATGTA CGCCCAGCAC GCCATCTGTC TGCTCACCGC CCTCTGCCGC CTCCTCCGTG
CCGTCTGCAG GCAAGAACAT CTGCTCCAGC TGCGGCCTCG AGATCCTGGA CCGATATCTG
CTCAAGGTCA ACAACCTCAT CTGGCACGTG CGGTGCCTCG AGTGCTCCGT GTGTCGCACG
TCGCTGAGGC AGCAGAACAG CTGCTACATC AAGAACAAGG AGATCTTCTG CAAGATGGAC
TACTTCAGCC GATTCGGGAC CAAGTGTGCC CGGTGCGGCC GACAGATCTA CGCCAGCGAC
TGGGTGCGGA GAGCTCGCGG CAACGCCTAC CACCTGGCCT GCTTCGCCTG CTTCTCGTGC
AAGCGCCAGC TGTCCACTGG TGAGGAGTTC GGCCTGGTCG AGGAGAAGGT GCTCTGCCGC
ATCCACTACG ACACCATGAT TGAGAACCTC AAGAGGGCCG CCGAGAACGG GAACGGCCTC
ACGTTGGAGG GGGCAGTGCC CTCGGAACAG GACAGTCAAC CCAAGCCGGC CAAGCGCGCG
CGGACGTCCT TCACCGCGGA ACAGCTGCAG GTTATGCAGG CGCAGTTCGC GCAGGACAAC
AACCCCGACG CTCAGACGCT GCAGAAGCTG GCGGACATGA CGGGCCTCAG CCGGAGAGTC
ATCCAGGTGT GGTTTCAAAA CTGCCGGGCG CGTCATAAAA AGCACACGCC GCAACACCCA
GTGCCGCCCT CGGGGGCGCC CCCGTCCCGC CTTCCCTCCG CCCTGTCCGA CGACATCCAC
TACACCCCGT TCAGCAGCCC CGAGCGGGCG CGCATGGTCA CCCTGCACGG CTACATTGAG
AGTCATCCTT TTTCAGTACT AACGCTGCCG GCACTTCCGC ATCTGCCCGT GGGCGCCCCA
CAGCTGCCCC TCAGCCGCTG A
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeqNP_001229262.1
CDS72..1172
Misc Feature(1)54..56(+)
Misc Feature(2)333..494(+)
Misc Feature(3)333..491(+)
Misc Feature(4)516..680(+)
Misc Feature(5)516..677(+)
Misc Feature(6)783..956(+)
Misc Feature(7)783..953(+)
Misc Feature(8)789..941(+)
Exon (1)1..122
Gene:LHX6
Gene Synonym:
Exon (2)123..194
Gene:LHX6
Gene Synonym:
Exon (3)195..377
Gene:LHX6
Gene Synonym:
Exon (4)378..499
Gene:LHX6
Gene Synonym:
Exon (5)500..720
Gene:LHX6
Gene Synonym:
Exon (6)721..821
Gene:LHX6
Gene Synonym:
Exon (7)822..917
Gene:LHX6
Gene Synonym:
Exon (8)918..1092
Gene:LHX6
Gene Synonym:
Exon (9)1093..3296
Gene:LHX6
Gene Synonym:
Translation
Position Chain Variation Link
70 70 c, g dbSNP:761218901
71 71 a, g dbSNP:776415238
79 79 c, g dbSNP:763620559
90 90 a, c dbSNP:760564270
116 116 a, g dbSNP:775213575
131 131 a, c dbSNP:752172261
132 132 c, g dbSNP:766793975
144 144 c, g dbSNP:368987512
162 162 c, g dbSNP:753262130
187 187 c, t dbSNP:763826373
240 240 c, g dbSNP:770060170
258 258 c, t dbSNP:748326948
264 264 a, c dbSNP:781554821
275 275 a, g dbSNP:755464037
287 287 a, c dbSNP:747349715
298 298 c, t dbSNP:780658108
299 299 c, t dbSNP:138880738
309 309 g, t dbSNP:753416011
315 315 c, t dbSNP:368544328
337 337 c, g dbSNP:764112046
350 350 c, g dbSNP:114083078
362 362 a, c dbSNP:185007094
386 386 a, c dbSNP:774057122
398 398 c, t dbSNP:368399322
399 399 g, t dbSNP:762036833
401 401 a, g dbSNP:776800689
404 404 a, g dbSNP:546749513
410 410 c, g dbSNP:769028128
419 419 c, g dbSNP:760908427
434 434 a, g dbSNP:150186287
439 439 a, g dbSNP:772377957
449 449 c, g dbSNP:572755316
461 461 c, t dbSNP:746238566
487 487 c, t dbSNP:114142278
497 497 c, t dbSNP:771379752
503 503 a, t dbSNP:753881753
515 515 a, g dbSNP:764121568
522 522 a, c dbSNP:756354677
536 536 g, t dbSNP:565893915
542 542 c, t dbSNP:756188084
557 557 g, t dbSNP:752798437
584 584 c, t dbSNP:767665614
590 590 c, t dbSNP:369599249
596 596 c, t dbSNP:116345380
602 602 c, t dbSNP:766789049
614 614 a, g dbSNP:141830577
629 629 c, t dbSNP:748394379
641 641 c, t dbSNP:770315479
644 644 a, c dbSNP:746525707
645 645 c, t dbSNP:201468383
674 674 c, g dbSNP:771625399
686 686 c, t dbSNP:745463090
690 690 a, g dbSNP:201011938
698 698 c, t dbSNP:778691163
701 701 a, c dbSNP:757184088
706 706 a, g dbSNP:749060535
708 708 a, g dbSNP:781352243
710 710 c, t dbSNP:777904963
713 713 c, g, t dbSNP:752726361
732 732 a, g dbSNP:756959110
734 734 a, g dbSNP:148096760
742 742 a, g dbSNP:748176324
755 755 g, t dbSNP:780988976
760 760 a, g dbSNP:200081104
779 779 c, g dbSNP:755129234
786 786 c, g dbSNP:751619203
797 797 a, c, g dbSNP:758583063
807 807 a, g dbSNP:141012050
809 809 c, g dbSNP:566259981
826 826 c, t dbSNP:778214950
833 833 a, g dbSNP:756534518
840 840 a, g dbSNP:753322621
842 842 g, t dbSNP:768108756
869 869 a, g dbSNP:758032415
884 884 g, t dbSNP:749855769
888 888 a, c, g dbSNP:761309017
889 889 a, t dbSNP:776502085
892 892 c, t dbSNP:763932135
894 894 g, t dbSNP:760455304
905 905 c, g dbSNP:775443266
932 932 c, t dbSNP:748826406
962 962 a, g dbSNP:777196788
969 969 c, t dbSNP:755776987
976 976 a, c dbSNP:142314211
983 983 c, g dbSNP:11789619
988 988 c, g dbSNP:113280031
995 995 a, g, t dbSNP:566096736
1007 1007 c, g dbSNP:751320966
1010 1010 c, t dbSNP:373399550
1012 1012 c, t dbSNP:758346959
1013 1013 a, c dbSNP:750546801
1014 1014 c, g dbSNP:765474854
1021 1021 a, g dbSNP:761983883
1022 1022 c, g dbSNP:776753440
1024 1024 a, c dbSNP:764350949
1027 1027 a, g, t dbSNP:775881165
1028 1028 a, c dbSNP:772460631
1030 1030 a, g dbSNP:746314669
1039 1039 c, g dbSNP:774825314
1050 1050 c, t dbSNP:769359783
1052 1052 c, t dbSNP:747634996
1065 1065 a, g dbSNP:780731428
1066 1066 c, t dbSNP:375958601
1082 1082 c, t dbSNP:746787054
1083 1083 c, t dbSNP:779843806
1114 1114 c, t dbSNP:370814560
1115 1115 a, g, t dbSNP:11540516
1116 1116 c, t dbSNP:368168207
1120 1120 c, t dbSNP:748139868
1121 1121 a, g dbSNP:776544019
1123 1123 c, t dbSNP:537469731
1129 1129 c, t dbSNP:747066054
1130 1130 a, g, t dbSNP:374714258
1133 1133 c, t dbSNP:746252501
1139 1139 c, t dbSNP:779092541
1140 1140 a, g dbSNP:757630584
1145 1145 c, t dbSNP:754465240
1146 1146 a, g dbSNP:576331654
1147 1147 c, t dbSNP:370896775
1155 1155 c, t dbSNP:751064467
1157 1157 a, g dbSNP:766059909
1161 1161 c, t dbSNP:1065351
1162 1162 c, t dbSNP:762453660
1167 1167 c, t dbSNP:750075092
1168 1168 a, g dbSNP:377581457
1176 1176 c, t dbSNP:761563046
1183 1183 c, t dbSNP:776595541
1191 1191 c, t dbSNP:373668070
1192 1192 c, g dbSNP:760780193
1196 1196 a, c dbSNP:775368606
1202 1202 c, t dbSNP:760220548
1206 1206 c, t dbSNP:772355603
1210 1210 a, c dbSNP:746137540
1213 1213 c, t dbSNP:779194088
1214 1214 a, g dbSNP:771464673
1229 1229 c, t dbSNP:554648060
1253 1253 a, g dbSNP:536307841
1310 1310 c, t dbSNP:74370188
1317 1317 c, g dbSNP:546439326
1334 1334 c, t dbSNP:534499780
1338 1338 a, g dbSNP:371254182
1351 1351 c, t dbSNP:552150886
1354 1354 a, t dbSNP:191293623
1355 1355 a, g dbSNP:760500699
1397 1397 c, t dbSNP:563227502
1427 1427 a, g dbSNP:759978675
1447 1447 c, t dbSNP:78827082
1448 1448 a, g dbSNP:187853257
1481 1481 c, t dbSNP:559487193
1486 1486 c, t dbSNP:113235907
1566 1566 a, g dbSNP:574069441
1602 1602 c, g dbSNP:577333248
1604 1604 a, t dbSNP:565594336
1607 1607 c, t dbSNP:543712927
1621 1621 -, ta dbSNP:58532716
1622 1622 -, at dbSNP:10568818
1646 1646 c, g dbSNP:182728290
1703 1703 a, g dbSNP:3793617
1710 1710 c, t dbSNP:145835146
1714 1714 a, g dbSNP:572238142
1751 1751 g, t dbSNP:776899736
1769 1769 a, g dbSNP:553830896
1786 1786 a, t dbSNP:534831234
1811 1811 a, g dbSNP:190733724
1840 1840 a, g dbSNP:770983702
1867 1867 c, t dbSNP:552446731
1891 1891 c, t dbSNP:3750486
1900 1900 a, g dbSNP:530594773
1904 1904 a, g dbSNP:569955976
1979 1979 g, t dbSNP:548253864
2038 2038 a, g dbSNP:186265474
2048 2048 a, g dbSNP:777909019
2050 2050 a, g dbSNP:559505841
2067 2067 c, t dbSNP:547149567
2072 2072 a, g dbSNP:532744478
2075 2075 a, c dbSNP:565298105
2142 2142 g, t dbSNP:112237338
2154 2154 c, g dbSNP:769961542
2157 2157 a, g dbSNP:748197828
2213 2213 c, g, t dbSNP:543988171
2226 2226 g, t dbSNP:531930598
2258 2258 a, g dbSNP:149824889
2265 2265 c, t dbSNP:181437437
2266 2266 a, g dbSNP:558413348
2293 2293 a, c dbSNP:553873675
2296 2296 c, t dbSNP:545127186
2358 2358 a, g dbSNP:576979066
2364 2364 a, g dbSNP:772161755
2392 2392 c, g dbSNP:757099463
2449 2449 c, t dbSNP:116126639
2450 2450 a, g dbSNP:10985563
2458 2458 a, g dbSNP:139808718
2490 2490 a, g dbSNP:571065065
2519 2519 a, g dbSNP:760345182
2532 2532 a, g dbSNP:554870230
2556 2556 c, t dbSNP:752197643
2576 2576 c, t dbSNP:766944339
2597 2597 g, t dbSNP:760084124
2604 2604 a, g dbSNP:377359088
2674 2674 a, c dbSNP:536274625
2700 2700 c, t dbSNP:146087682
2702 2702 a, g dbSNP:367617466
2717 2717 a, c dbSNP:75374421
2735 2735 a, g dbSNP:144211662
2736 2736 a, c dbSNP:571314738
2827 2827 a, g dbSNP:778581577
2847 2847 c, g, t dbSNP:56092166
2848 2848 a, g dbSNP:554471050
2878 2878 a, g dbSNP:561264595
2895 2895 c, t dbSNP:542888720
2925 2925 c, t dbSNP:754740049
2969 2969 g, t dbSNP:763448997
2985 2985 c, t dbSNP:773741616
3030 3030 c, t dbSNP:770091433
3031 3031 a, g dbSNP:748332304
3092 3092 a, g dbSNP:190568182
3106 3106 c, g dbSNP:186921183
3118 3118 a, t dbSNP:545377153
3141 3141 -, a dbSNP:748615083
3158 3158 c, t dbSNP:578071695
3159 3159 a, c, g dbSNP:78509080
3161 3161 a, g dbSNP:75280874
3188 3188 a, t dbSNP:768681982
3215 3215 a, c, g dbSNP:79457316
3224 3224 c, t dbSNP:745801203
3295 3295 c, g dbSNP:541574885

Target ORF information:

RefSeq Version NM_001242333
Organism Homo sapiens (human)
Definition Homo sapiens LIM homeobox 6 (LHX6), transcript variant 3, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_001242333

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
ATGCGCCGGG GGTTGTGCCG GCGCAGCGCT GAGAATCCCG ACGCGGGGCC GGTGATGGCC 
CAGCCAGGGT CCGGCTGCAA AGCGACCACC CGCTGTCTTG AAGGGACCGC GCCGCCCGCC
ATGGCTCAGT CTGACGCCGA GGCCCTGGCA GGAGCTCTGG ACAAGGACGA GGGTCAGGCC
TCCCCATGTA CGCCCAGCAC GCCATCTGTC TGCTCACCGC CCTCTGCCGC CTCCTCCGTG
CCGTCTGCAG GCAAGAACAT CTGCTCCAGC TGCGGCCTCG AGATCCTGGA CCGATATCTG
CTCAAGGTCA ACAACCTCAT CTGGCACGTG CGGTGCCTCG AGTGCTCCGT GTGTCGCACG
TCGCTGAGGC AGCAGAACAG CTGCTACATC AAGAACAAGG AGATCTTCTG CAAGATGGAC
TACTTCAGCC GATTCGGGAC CAAGTGTGCC CGGTGCGGCC GACAGATCTA CGCCAGCGAC
TGGGTGCGGA GAGCTCGCGG CAACGCCTAC CACCTGGCCT GCTTCGCCTG CTTCTCGTGC
AAGCGCCAGC TGTCCACTGG TGAGGAGTTC GGCCTGGTCG AGGAGAAGGT GCTCTGCCGC
ATCCACTACG ACACCATGAT TGAGAACCTC AAGAGGGCCG CCGAGAACGG GAACGGCCTC
ACGTTGGAGG GGGCAGTGCC CTCGGAACAG GACAGTCAAC CCAAGCCGGC CAAGCGCGCG
CGGACGTCCT TCACCGCGGA ACAGCTGCAG GTTATGCAGG CGCAGTTCGC GCAGGACAAC
AACCCCGACG CTCAGACGCT GCAGAAGCTG GCGGACATGA CGGGCCTCAG CCGGAGAGTC
ATCCAGGTGT GGTTTCAAAA CTGCCGGGCG CGTCATAAAA AGCACACGCC GCAACACCCA
GTGCCGCCCT CGGGGGCGCC CCCGTCCCGC CTTCCCTCCG CCCTGTCCGA CGACATCCAC
TACACCCCGT TCAGCAGCCC CGAGCGGGCG CGCATGGTCA CCCTGCACGG CTACATTGAG
AGTCATCCTT TTTCAGTACT AACGCTGCCG GCACTTCCGC ATCTGCCCGT GGGCGCCCCA
CAGCTGCCCC TCAGCCGCTG A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu12077
Accession Version NM_001242334.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1092bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector Document: User manual_GenEZ ORF Clone Products.pdf (pdf)
Clone information Clone Map
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags Document: MSDS_GenEZ ORF Clone Products.pdf (pdf)
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 15-MAR-2015
Organism Homo sapiens (human)
Product LIM/homeobox protein Lhx6 isoform 4
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AK289827.1, BC103936.1, AK126982.1 and AI265821.1. Summary: This gene encodes a member of a large protein family that contains the LIM domain, a unique cysteine-rich zinc-binding domain. The encoded protein may function as a transcriptional regulator and may be involved in the control of differentiation and development of neural and lymphoid cells. Two alternatively spliced transcript variants encoding distinct isoforms have been described for this gene. Alternatively spliced transcript variants have been identified, but their biological validity has not been determined. [provided by RefSeq, Jul 2008]. Transcript Variant: This variant (4) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (4) is shorter at the N-terminus compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: AK289827.1, AB031041.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968968, SAMEA2142680 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
ATGGCCCAGC CAGGGTCCGG CTGCAAAGCG ACCACCCGCT GTCTTGAAGG GACCGCGCCG 
CCCGCCATGG CTCAGTCTGA CGCCGAGGCC CTGGCAGGAG CTCTGGACAA GGACGAGGGT
CAGGCCTCCC CATGTACGCC CAGCACGCCA TCTGTCTGCT CACCGCCCTC TGCCGCCTCC
TCCGTGCCGT CTGCAGGCAA GAACATCTGC TCCAGCTGCG GCCTCGAGAT CCTGGACCGA
TATCTGCTCA AGGTCAACAA CCTCATCTGG CACGTGCGGT GCCTCGAGTG CTCCGTGTGT
CGCACGTCGC TGAGGCAGCA GAACAGCTGC TACATCAAGA ACAAGGAGAT CTTCTGCAAG
ATGGACTACT TCAGCCGATT CGGGACCAAG TGTGCCCGGT GCGGCCGACA GATCTACGCC
AGCGACTGGG TGCGGAGAGC TCGCGGCAAC GCCTACCACC TGGCCTGCTT CGCCTGCTTC
TCGTGCAAGC GCCAGCTGTC CACTGGTGAG GAGTTCGGCC TGGTCGAGGA GAAGGTGCTC
TGCCGCATCC ACTACGACAC CATGATTGAG AACCTCAAGA GGGCCGCCGA GAACGGGAAC
GGCCTCACGT TGGAGGGGGC AGTGCCCTCG GAACAGGACA GTCAACCCAA GCCGGCCAAG
CGCGCGCGGA CGTCCTTCAC CGCGGAACAG CTGCAGGTTA TGCAGGCGCA GTTCGCGCAG
GACAACAACC CCGACGCTCA GACGCTGCAG AAGCTGGCGG ACATGACGGG CCTCAGCCGG
AGAGTCATCC AGGTGTGGTT TCAAAACTGC CGGGCGCGTC ATAAAAAGCA CACGCCGCAA
CACCCAGTGC CGCCCTCGGG GGCGCCCCCG TCCCGCCTTC CCTCCGCCCT GTCCGACGAC
ATCCACTACA CCCCGTTCAG CAGCCCCGAG CGGGCGCGCA TGGTCACCCT GCACGGCTAC
ATTGAGAGTC AGGTACAGTG CGGGCAGGTG CACTGCCGGC TGCCTTACAC CGCACCCCCC
GTCCACCTCA AAGCCGATAT GGATGGGCCG CTCTCCAACC GGGGTGAGAA GGTCATCCTT
TTTCAGTACT AA
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeqNP_001229263.1
CDS110..1201
Misc Feature(1)272..691(+)
Misc Feature(2)317..478(+)
Misc Feature(3)317..475(+)
Misc Feature(4)500..664(+)
Misc Feature(5)500..661(+)
Misc Feature(6)767..940(+)
Misc Feature(7)767..937(+)
Misc Feature(8)773..925(+)
Exon (1)1..178
Gene:LHX6
Gene Synonym:
Exon (2)179..361
Gene:LHX6
Gene Synonym:
Exon (3)362..483
Gene:LHX6
Gene Synonym:
Exon (4)484..704
Gene:LHX6
Gene Synonym:
Exon (5)705..805
Gene:LHX6
Gene Synonym:
Exon (6)806..901
Gene:LHX6
Gene Synonym:
Exon (7)902..1076
Gene:LHX6
Gene Synonym:
Exon (8)1077..1180
Gene:LHX6
Gene Synonym:
Exon (9)1181..3384
Gene:LHX6
Gene Synonym:
Translation
Position Chain Variation Link
71 71 -, agc dbSNP:759252680
85 85 g, t dbSNP:745738479
88 88 c, t dbSNP:774427013
90 90 c, t dbSNP:567444926
92 92 a, c dbSNP:771098566
96 96 a, c, g dbSNP:778107789
97 97 a, c, g, t dbSNP:145964887
98 98 -, c dbSNP:771289498
98 98 -, c dbSNP:776088074
98 98 c, g dbSNP:755559018
99 99 -, tcc dbSNP:778098551
99 99 -, tc dbSNP:747440326
99 99 c, t dbSNP:566350165
115 115 a, c dbSNP:752172261
116 116 c, g dbSNP:766793975
128 128 c, g dbSNP:368987512
146 146 c, g dbSNP:753262130
171 171 c, t dbSNP:763826373
224 224 c, g dbSNP:770060170
242 242 c, t dbSNP:748326948
248 248 a, c dbSNP:781554821
259 259 a, g dbSNP:755464037
271 271 a, c dbSNP:747349715
282 282 c, t dbSNP:780658108
283 283 c, t dbSNP:138880738
293 293 g, t dbSNP:753416011
299 299 c, t dbSNP:368544328
321 321 c, g dbSNP:764112046
334 334 c, g dbSNP:114083078
346 346 a, c dbSNP:185007094
370 370 a, c dbSNP:774057122
382 382 c, t dbSNP:368399322
383 383 g, t dbSNP:762036833
385 385 a, g dbSNP:776800689
388 388 a, g dbSNP:546749513
394 394 c, g dbSNP:769028128
403 403 c, g dbSNP:760908427
418 418 a, g dbSNP:150186287
423 423 a, g dbSNP:772377957
433 433 c, g dbSNP:572755316
445 445 c, t dbSNP:746238566
471 471 c, t dbSNP:114142278
481 481 c, t dbSNP:771379752
487 487 a, t dbSNP:753881753
499 499 a, g dbSNP:764121568
506 506 a, c dbSNP:756354677
520 520 g, t dbSNP:565893915
526 526 c, t dbSNP:756188084
541 541 g, t dbSNP:752798437
568 568 c, t dbSNP:767665614
574 574 c, t dbSNP:369599249
580 580 c, t dbSNP:116345380
586 586 c, t dbSNP:766789049
598 598 a, g dbSNP:141830577
613 613 c, t dbSNP:748394379
625 625 c, t dbSNP:770315479
628 628 a, c dbSNP:746525707
629 629 c, t dbSNP:201468383
658 658 c, g dbSNP:771625399
670 670 c, t dbSNP:745463090
674 674 a, g dbSNP:201011938
682 682 c, t dbSNP:778691163
685 685 a, c dbSNP:757184088
690 690 a, g dbSNP:749060535
692 692 a, g dbSNP:781352243
694 694 c, t dbSNP:777904963
697 697 c, g, t dbSNP:752726361
716 716 a, g dbSNP:756959110
718 718 a, g dbSNP:148096760
726 726 a, g dbSNP:748176324
739 739 g, t dbSNP:780988976
744 744 a, g dbSNP:200081104
763 763 c, g dbSNP:755129234
770 770 c, g dbSNP:751619203
781 781 a, c, g dbSNP:758583063
791 791 a, g dbSNP:141012050
793 793 c, g dbSNP:566259981
810 810 c, t dbSNP:778214950
817 817 a, g dbSNP:756534518
824 824 a, g dbSNP:753322621
826 826 g, t dbSNP:768108756
853 853 a, g dbSNP:758032415
868 868 g, t dbSNP:749855769
872 872 a, c, g dbSNP:761309017
873 873 a, t dbSNP:776502085
876 876 c, t dbSNP:763932135
878 878 g, t dbSNP:760455304
889 889 c, g dbSNP:775443266
916 916 c, t dbSNP:748826406
946 946 a, g dbSNP:777196788
953 953 c, t dbSNP:755776987
960 960 a, c dbSNP:142314211
967 967 c, g dbSNP:11789619
972 972 c, g dbSNP:113280031
979 979 a, g, t dbSNP:566096736
991 991 c, g dbSNP:751320966
994 994 c, t dbSNP:373399550
996 996 c, t dbSNP:758346959
997 997 a, c dbSNP:750546801
998 998 c, g dbSNP:765474854
1005 1005 a, g dbSNP:761983883
1006 1006 c, g dbSNP:776753440
1008 1008 a, c dbSNP:764350949
1011 1011 a, g, t dbSNP:775881165
1012 1012 a, c dbSNP:772460631
1014 1014 a, g dbSNP:746314669
1023 1023 c, g dbSNP:774825314
1034 1034 c, t dbSNP:769359783
1036 1036 c, t dbSNP:747634996
1049 1049 a, g dbSNP:780731428
1050 1050 c, t dbSNP:375958601
1066 1066 c, t dbSNP:746787054
1067 1067 c, t dbSNP:779843806
1082 1082 g, t dbSNP:745505125
1090 1090 c, t dbSNP:202183953
1091 1091 a, g dbSNP:373915153
1093 1093 a, g dbSNP:756132963
1102 1102 c, g dbSNP:547463991
1107 1107 a, g dbSNP:371503306
1108 1108 g, t dbSNP:759916051
1120 1120 c, t dbSNP:770537186
1121 1121 a, g dbSNP:766877341
1122 1122 c, t dbSNP:367663922
1124 1124 c, g dbSNP:773582289
1127 1127 a, c, g, t dbSNP:41273919
1128 1128 c, t dbSNP:771797999
1129 1129 a, c, g, t dbSNP:777365493
1130 1130 a, g dbSNP:771003127
1134 1134 a, c dbSNP:749304681
1135 1135 c, t dbSNP:777566727
1137 1137 a, t dbSNP:756257207
1144 1144 c, t dbSNP:752671229
1145 1145 a, g dbSNP:781424815
1146 1146 a, g dbSNP:200077245
1148 1148 a, g dbSNP:549579918
1150 1150 a, g dbSNP:531957865
1152 1152 a, g dbSNP:199844488
1154 1154 a, g dbSNP:758688851
1158 1158 c, t dbSNP:561275677
1159 1159 a, g dbSNP:765644564
1160 1160 a, c dbSNP:146076339
1162 1162 c, t dbSNP:775104521
1169 1169 c, t dbSNP:767286367
1170 1170 a, g, t dbSNP:774135453
1202 1202 c, t dbSNP:370814560
1203 1203 a, g, t dbSNP:11540516
1204 1204 c, t dbSNP:368168207
1208 1208 c, t dbSNP:748139868
1209 1209 a, g dbSNP:776544019
1211 1211 c, t dbSNP:537469731
1217 1217 c, t dbSNP:747066054
1218 1218 a, g, t dbSNP:374714258
1221 1221 c, t dbSNP:746252501
1227 1227 c, t dbSNP:779092541
1228 1228 a, g dbSNP:757630584
1233 1233 c, t dbSNP:754465240
1234 1234 a, g dbSNP:576331654
1235 1235 c, t dbSNP:370896775
1243 1243 c, t dbSNP:751064467
1245 1245 a, g dbSNP:766059909
1249 1249 c, t dbSNP:1065351
1250 1250 c, t dbSNP:762453660
1255 1255 c, t dbSNP:750075092
1256 1256 a, g dbSNP:377581457
1264 1264 c, t dbSNP:761563046
1271 1271 c, t dbSNP:776595541
1279 1279 c, t dbSNP:373668070
1280 1280 c, g dbSNP:760780193
1284 1284 a, c dbSNP:775368606
1290 1290 c, t dbSNP:760220548
1294 1294 c, t dbSNP:772355603
1298 1298 a, c dbSNP:746137540
1301 1301 c, t dbSNP:779194088
1302 1302 a, g dbSNP:771464673
1317 1317 c, t dbSNP:554648060
1341 1341 a, g dbSNP:536307841
1398 1398 c, t dbSNP:74370188
1405 1405 c, g dbSNP:546439326
1422 1422 c, t dbSNP:534499780
1426 1426 a, g dbSNP:371254182
1439 1439 c, t dbSNP:552150886
1442 1442 a, t dbSNP:191293623
1443 1443 a, g dbSNP:760500699
1485 1485 c, t dbSNP:563227502
1515 1515 a, g dbSNP:759978675
1535 1535 c, t dbSNP:78827082
1536 1536 a, g dbSNP:187853257
1569 1569 c, t dbSNP:559487193
1574 1574 c, t dbSNP:113235907
1654 1654 a, g dbSNP:574069441
1690 1690 c, g dbSNP:577333248
1692 1692 a, t dbSNP:565594336
1695 1695 c, t dbSNP:543712927
1709 1709 -, ta dbSNP:58532716
1710 1710 -, at dbSNP:10568818
1734 1734 c, g dbSNP:182728290
1791 1791 a, g dbSNP:3793617
1798 1798 c, t dbSNP:145835146
1802 1802 a, g dbSNP:572238142
1839 1839 g, t dbSNP:776899736
1857 1857 a, g dbSNP:553830896
1874 1874 a, t dbSNP:534831234
1899 1899 a, g dbSNP:190733724
1928 1928 a, g dbSNP:770983702
1955 1955 c, t dbSNP:552446731
1979 1979 c, t dbSNP:3750486
1988 1988 a, g dbSNP:530594773
1992 1992 a, g dbSNP:569955976
2067 2067 g, t dbSNP:548253864
2126 2126 a, g dbSNP:186265474
2136 2136 a, g dbSNP:777909019
2138 2138 a, g dbSNP:559505841
2155 2155 c, t dbSNP:547149567
2160 2160 a, g dbSNP:532744478
2163 2163 a, c dbSNP:565298105
2230 2230 g, t dbSNP:112237338
2242 2242 c, g dbSNP:769961542
2245 2245 a, g dbSNP:748197828
2301 2301 c, g, t dbSNP:543988171
2314 2314 g, t dbSNP:531930598
2346 2346 a, g dbSNP:149824889
2353 2353 c, t dbSNP:181437437
2354 2354 a, g dbSNP:558413348
2381 2381 a, c dbSNP:553873675
2384 2384 c, t dbSNP:545127186
2446 2446 a, g dbSNP:576979066
2452 2452 a, g dbSNP:772161755
2480 2480 c, g dbSNP:757099463
2537 2537 c, t dbSNP:116126639
2538 2538 a, g dbSNP:10985563
2546 2546 a, g dbSNP:139808718
2578 2578 a, g dbSNP:571065065
2607 2607 a, g dbSNP:760345182
2620 2620 a, g dbSNP:554870230
2644 2644 c, t dbSNP:752197643
2664 2664 c, t dbSNP:766944339
2685 2685 g, t dbSNP:760084124
2692 2692 a, g dbSNP:377359088
2762 2762 a, c dbSNP:536274625
2788 2788 c, t dbSNP:146087682
2790 2790 a, g dbSNP:367617466
2805 2805 a, c dbSNP:75374421
2823 2823 a, g dbSNP:144211662
2824 2824 a, c dbSNP:571314738
2915 2915 a, g dbSNP:778581577
2935 2935 c, g, t dbSNP:56092166
2936 2936 a, g dbSNP:554471050
2966 2966 a, g dbSNP:561264595
2983 2983 c, t dbSNP:542888720
3013 3013 c, t dbSNP:754740049
3057 3057 g, t dbSNP:763448997
3073 3073 c, t dbSNP:773741616
3118 3118 c, t dbSNP:770091433
3119 3119 a, g dbSNP:748332304
3180 3180 a, g dbSNP:190568182
3194 3194 c, g dbSNP:186921183
3206 3206 a, t dbSNP:545377153
3229 3229 -, a dbSNP:748615083
3246 3246 c, t dbSNP:578071695
3247 3247 a, c, g dbSNP:78509080
3249 3249 a, g dbSNP:75280874
3276 3276 a, t dbSNP:768681982
3303 3303 a, c, g dbSNP:79457316
3312 3312 c, t dbSNP:745801203
3383 3383 c, g dbSNP:541574885

Target ORF information:

RefSeq Version NM_001242334
Organism Homo sapiens (human)
Definition Homo sapiens LIM homeobox 6 (LHX6), transcript variant 4, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_001242334

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
ATGGCCCAGC CAGGGTCCGG CTGCAAAGCG ACCACCCGCT GTCTTGAAGG GACCGCGCCG 
CCCGCCATGG CTCAGTCTGA CGCCGAGGCC CTGGCAGGAG CTCTGGACAA GGACGAGGGT
CAGGCCTCCC CATGTACGCC CAGCACGCCA TCTGTCTGCT CACCGCCCTC TGCCGCCTCC
TCCGTGCCGT CTGCAGGCAA GAACATCTGC TCCAGCTGCG GCCTCGAGAT CCTGGACCGA
TATCTGCTCA AGGTCAACAA CCTCATCTGG CACGTGCGGT GCCTCGAGTG CTCCGTGTGT
CGCACGTCGC TGAGGCAGCA GAACAGCTGC TACATCAAGA ACAAGGAGAT CTTCTGCAAG
ATGGACTACT TCAGCCGATT CGGGACCAAG TGTGCCCGGT GCGGCCGACA GATCTACGCC
AGCGACTGGG TGCGGAGAGC TCGCGGCAAC GCCTACCACC TGGCCTGCTT CGCCTGCTTC
TCGTGCAAGC GCCAGCTGTC CACTGGTGAG GAGTTCGGCC TGGTCGAGGA GAAGGTGCTC
TGCCGCATCC ACTACGACAC CATGATTGAG AACCTCAAGA GGGCCGCCGA GAACGGGAAC
GGCCTCACGT TGGAGGGGGC AGTGCCCTCG GAACAGGACA GTCAACCCAA GCCGGCCAAG
CGCGCGCGGA CGTCCTTCAC CGCGGAACAG CTGCAGGTTA TGCAGGCGCA GTTCGCGCAG
GACAACAACC CCGACGCTCA GACGCTGCAG AAGCTGGCGG ACATGACGGG CCTCAGCCGG
AGAGTCATCC AGGTGTGGTT TCAAAACTGC CGGGCGCGTC ATAAAAAGCA CACGCCGCAA
CACCCAGTGC CGCCCTCGGG GGCGCCCCCG TCCCGCCTTC CCTCCGCCCT GTCCGACGAC
ATCCACTACA CCCCGTTCAG CAGCCCCGAG CGGGCGCGCA TGGTCACCCT GCACGGCTAC
ATTGAGAGTC AGGTACAGTG CGGGCAGGTG CACTGCCGGC TGCCTTACAC CGCACCCCCC
GTCCACCTCA AAGCCGATAT GGATGGGCCG CTCTCCAACC GGGGTGAGAA GGTCATCCTT
TTTCAGTACT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu11090
Accession Version NM_001242335.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 531bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector Document: User manual_GenEZ ORF Clone Products.pdf (pdf)
Clone information Clone Map
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags Document: MSDS_GenEZ ORF Clone Products.pdf (pdf)
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 15-MAR-2015
Organism Homo sapiens (human)
Product LIM/homeobox protein Lhx6 isoform 5
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AK126982.1 and AI265821.1. Summary: This gene encodes a member of a large protein family that contains the LIM domain, a unique cysteine-rich zinc-binding domain. The encoded protein may function as a transcriptional regulator and may be involved in the control of differentiation and development of neural and lymphoid cells. Two alternatively spliced transcript variants encoding distinct isoforms have been described for this gene. Alternatively spliced transcript variants have been identified, but their biological validity has not been determined. [provided by RefSeq, Jul 2008]. Transcript Variant: This variant (5) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (5) is shorter at the N-terminus compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: AK126982.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2158188 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
421
481
ATGATTGAGA ACCTCAAGAG GGCCGCCGAG AACGGGAACG GCCTCACGTT GGAGGGGGCA 
GTGCCCTCGG AACAGGACAG TCAACCCAAG CCGGCCAAGC GCGCGCGGAC GTCCTTCACC
GCGGAACAGC TGCAGGTTAT GCAGGCGCAG TTCGCGCAGG ACAACAACCC CGACGCTCAG
ACGCTGCAGA AGCTGGCGGA CATGACGGGC CTCAGCCGGA GAGTCATCCA GGTGTGGTTT
CAAAACTGCC GGGCGCGTCA TAAAAAGCAC ACGCCGCAAC ACCCAGTGCC GCCCTCGGGG
GCGCCCCCGT CCCGCCTTCC CTCCGCCCTG TCCGACGACA TCCACTACAC CCCGTTCAGC
AGCCCCGAGC GGGCGCGCAT GGTCACCCTG CACGGCTACA TTGAGAGTCA GGTACAGTGC
GGGCAGGTGC ACTGCCGGCT GCCTTACACC GCACCCCCCG TCCACCTCAA AGCCGATATG
GATGGGCCGC TCTCCAACCG GGGTGAGAAG GTCATCCTTT TTCAGTACTA A
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeqNP_001229264.1
CDS880..1410
Misc Feature(1)616..618(+)
Misc Feature(2)976..1149(+)
Misc Feature(3)976..1146(+)
Misc Feature(4)982..1134(+)
Exon (1)1..692
Gene:LHX6
Gene Synonym:
Exon (2)693..913
Gene:LHX6
Gene Synonym:
Exon (3)914..1014
Gene:LHX6
Gene Synonym:
Exon (4)1015..1110
Gene:LHX6
Gene Synonym:
Exon (5)1111..1285
Gene:LHX6
Gene Synonym:
Exon (6)1286..1389
Gene:LHX6
Gene Synonym:
Exon (7)1390..3593
Gene:LHX6
Gene Synonym:
Translation
Position Chain Variation Link
1 1 g, t dbSNP:755337854
15 15 g, t dbSNP:780873419
49 49 a, t dbSNP:75665828
110 110 a, t dbSNP:533809181
136 136 g, t dbSNP:566312615
236 236 g, t dbSNP:913934
252 252 c, t dbSNP:763100906
265 265 a, g dbSNP:773424099
270 270 c, g dbSNP:765293023
313 313 c, g dbSNP:532820125
319 319 g, t dbSNP:761852473
349 349 a, g dbSNP:562754224
372 372 g, t dbSNP:368607870
381 381 c, g dbSNP:550804100
466 466 a, c dbSNP:529443749
473 473 c, t dbSNP:569747665
507 507 -, t dbSNP:61326516
512 512 a, t dbSNP:745843733
513 513 c, tt dbSNP:374598493
513 513 c, t dbSNP:540555822
514 514 c, t dbSNP:58897697
514 514 -, t dbSNP:372412177
585 585 c, t dbSNP:185460419
587 587 c, t dbSNP:546323211
624 624 g, t dbSNP:553290661
665 665 a, c dbSNP:757871640
671 671 c, g dbSNP:770855870
674 674 c, t dbSNP:116648391
696 696 a, t dbSNP:753881753
708 708 a, g dbSNP:764121568
715 715 a, c dbSNP:756354677
729 729 g, t dbSNP:565893915
735 735 c, t dbSNP:756188084
750 750 g, t dbSNP:752798437
777 777 c, t dbSNP:767665614
783 783 c, t dbSNP:369599249
789 789 c, t dbSNP:116345380
795 795 c, t dbSNP:766789049
807 807 a, g dbSNP:141830577
822 822 c, t dbSNP:748394379
834 834 c, t dbSNP:770315479
837 837 a, c dbSNP:746525707
838 838 c, t dbSNP:201468383
867 867 c, g dbSNP:771625399
879 879 c, t dbSNP:745463090
883 883 a, g dbSNP:201011938
891 891 c, t dbSNP:778691163
894 894 a, c dbSNP:757184088
899 899 a, g dbSNP:749060535
901 901 a, g dbSNP:781352243
903 903 c, t dbSNP:777904963
906 906 c, g, t dbSNP:752726361
925 925 a, g dbSNP:756959110
927 927 a, g dbSNP:148096760
935 935 a, g dbSNP:748176324
948 948 g, t dbSNP:780988976
953 953 a, g dbSNP:200081104
972 972 c, g dbSNP:755129234
979 979 c, g dbSNP:751619203
990 990 a, c, g dbSNP:758583063
1000 1000 a, g dbSNP:141012050
1002 1002 c, g dbSNP:566259981
1019 1019 c, t dbSNP:778214950
1026 1026 a, g dbSNP:756534518
1033 1033 a, g dbSNP:753322621
1035 1035 g, t dbSNP:768108756
1062 1062 a, g dbSNP:758032415
1077 1077 g, t dbSNP:749855769
1081 1081 a, c, g dbSNP:761309017
1082 1082 a, t dbSNP:776502085
1085 1085 c, t dbSNP:763932135
1087 1087 g, t dbSNP:760455304
1098 1098 c, g dbSNP:775443266
1125 1125 c, t dbSNP:748826406
1155 1155 a, g dbSNP:777196788
1162 1162 c, t dbSNP:755776987
1169 1169 a, c dbSNP:142314211
1176 1176 c, g dbSNP:11789619
1181 1181 c, g dbSNP:113280031
1188 1188 a, g, t dbSNP:566096736
1200 1200 c, g dbSNP:751320966
1203 1203 c, t dbSNP:373399550
1205 1205 c, t dbSNP:758346959
1206 1206 a, c dbSNP:750546801
1207 1207 c, g dbSNP:765474854
1214 1214 a, g dbSNP:761983883
1215 1215 c, g dbSNP:776753440
1217 1217 a, c dbSNP:764350949
1220 1220 a, g, t dbSNP:775881165
1221 1221 a, c dbSNP:772460631
1223 1223 a, g dbSNP:746314669
1232 1232 c, g dbSNP:774825314
1243 1243 c, t dbSNP:769359783
1245 1245 c, t dbSNP:747634996
1258 1258 a, g dbSNP:780731428
1259 1259 c, t dbSNP:375958601
1275 1275 c, t dbSNP:746787054
1276 1276 c, t dbSNP:779843806
1291 1291 g, t dbSNP:745505125
1299 1299 c, t dbSNP:202183953
1300 1300 a, g dbSNP:373915153
1302 1302 a, g dbSNP:756132963
1311 1311 c, g dbSNP:547463991
1316 1316 a, g dbSNP:371503306
1317 1317 g, t dbSNP:759916051
1329 1329 c, t dbSNP:770537186
1330 1330 a, g dbSNP:766877341
1331 1331 c, t dbSNP:367663922
1333 1333 c, g dbSNP:773582289
1336 1336 a, c, g, t dbSNP:41273919
1337 1337 c, t dbSNP:771797999
1338 1338 a, c, g, t dbSNP:777365493
1339 1339 a, g dbSNP:771003127
1343 1343 a, c dbSNP:749304681
1344 1344 c, t dbSNP:777566727
1346 1346 a, t dbSNP:756257207
1353 1353 c, t dbSNP:752671229
1354 1354 a, g dbSNP:781424815
1355 1355 a, g dbSNP:200077245
1357 1357 a, g dbSNP:549579918
1359 1359 a, g dbSNP:531957865
1361 1361 a, g dbSNP:199844488
1363 1363 a, g dbSNP:758688851
1367 1367 c, t dbSNP:561275677
1368 1368 a, g dbSNP:765644564
1369 1369 a, c dbSNP:146076339
1371 1371 c, t dbSNP:775104521
1378 1378 c, t dbSNP:767286367
1379 1379 a, g, t dbSNP:774135453
1411 1411 c, t dbSNP:370814560
1412 1412 a, g, t dbSNP:11540516
1413 1413 c, t dbSNP:368168207
1417 1417 c, t dbSNP:748139868
1418 1418 a, g dbSNP:776544019
1420 1420 c, t dbSNP:537469731
1426 1426 c, t dbSNP:747066054
1427 1427 a, g, t dbSNP:374714258
1430 1430 c, t dbSNP:746252501
1436 1436 c, t dbSNP:779092541
1437 1437 a, g dbSNP:757630584
1442 1442 c, t dbSNP:754465240
1443 1443 a, g dbSNP:576331654
1444 1444 c, t dbSNP:370896775
1452 1452 c, t dbSNP:751064467
1454 1454 a, g dbSNP:766059909
1458 1458 c, t dbSNP:1065351
1459 1459 c, t dbSNP:762453660
1464 1464 c, t dbSNP:750075092
1465 1465 a, g dbSNP:377581457
1473 1473 c, t dbSNP:761563046
1480 1480 c, t dbSNP:776595541
1488 1488 c, t dbSNP:373668070
1489 1489 c, g dbSNP:760780193
1493 1493 a, c dbSNP:775368606
1499 1499 c, t dbSNP:760220548
1503 1503 c, t dbSNP:772355603
1507 1507 a, c dbSNP:746137540
1510 1510 c, t dbSNP:779194088
1511 1511 a, g dbSNP:771464673
1526 1526 c, t dbSNP:554648060
1550 1550 a, g dbSNP:536307841
1607 1607 c, t dbSNP:74370188
1614 1614 c, g dbSNP:546439326
1631 1631 c, t dbSNP:534499780
1635 1635 a, g dbSNP:371254182
1648 1648 c, t dbSNP:552150886
1651 1651 a, t dbSNP:191293623
1652 1652 a, g dbSNP:760500699
1694 1694 c, t dbSNP:563227502
1724 1724 a, g dbSNP:759978675
1744 1744 c, t dbSNP:78827082
1745 1745 a, g dbSNP:187853257
1778 1778 c, t dbSNP:559487193
1783 1783 c, t dbSNP:113235907
1863 1863 a, g dbSNP:574069441
1899 1899 c, g dbSNP:577333248
1901 1901 a, t dbSNP:565594336
1904 1904 c, t dbSNP:543712927
1918 1918 -, ta dbSNP:58532716
1919 1919 -, at dbSNP:10568818
1943 1943 c, g dbSNP:182728290
2000 2000 a, g dbSNP:3793617
2007 2007 c, t dbSNP:145835146
2011 2011 a, g dbSNP:572238142
2048 2048 g, t dbSNP:776899736
2066 2066 a, g dbSNP:553830896
2083 2083 a, t dbSNP:534831234
2108 2108 a, g dbSNP:190733724
2137 2137 a, g dbSNP:770983702
2164 2164 c, t dbSNP:552446731
2188 2188 c, t dbSNP:3750486
2197 2197 a, g dbSNP:530594773
2201 2201 a, g dbSNP:569955976
2276 2276 g, t dbSNP:548253864
2335 2335 a, g dbSNP:186265474
2345 2345 a, g dbSNP:777909019
2347 2347 a, g dbSNP:559505841
2364 2364 c, t dbSNP:547149567
2369 2369 a, g dbSNP:532744478
2372 2372 a, c dbSNP:565298105
2439 2439 g, t dbSNP:112237338
2451 2451 c, g dbSNP:769961542
2454 2454 a, g dbSNP:748197828
2510 2510 c, g, t dbSNP:543988171
2523 2523 g, t dbSNP:531930598
2555 2555 a, g dbSNP:149824889
2562 2562 c, t dbSNP:181437437
2563 2563 a, g dbSNP:558413348
2590 2590 a, c dbSNP:553873675
2593 2593 c, t dbSNP:545127186
2655 2655 a, g dbSNP:576979066
2661 2661 a, g dbSNP:772161755
2689 2689 c, g dbSNP:757099463
2746 2746 c, t dbSNP:116126639
2747 2747 a, g dbSNP:10985563
2755 2755 a, g dbSNP:139808718
2787 2787 a, g dbSNP:571065065
2816 2816 a, g dbSNP:760345182
2829 2829 a, g dbSNP:554870230
2853 2853 c, t dbSNP:752197643
2873 2873 c, t dbSNP:766944339
2894 2894 g, t dbSNP:760084124
2901 2901 a, g dbSNP:377359088
2971 2971 a, c dbSNP:536274625
2997 2997 c, t dbSNP:146087682
2999 2999 a, g dbSNP:367617466
3014 3014 a, c dbSNP:75374421
3032 3032 a, g dbSNP:144211662
3033 3033 a, c dbSNP:571314738
3124 3124 a, g dbSNP:778581577
3144 3144 c, g, t dbSNP:56092166
3145 3145 a, g dbSNP:554471050
3175 3175 a, g dbSNP:561264595
3192 3192 c, t dbSNP:542888720
3222 3222 c, t dbSNP:754740049
3266 3266 g, t dbSNP:763448997
3282 3282 c, t dbSNP:773741616
3327 3327 c, t dbSNP:770091433
3328 3328 a, g dbSNP:748332304
3389 3389 a, g dbSNP:190568182
3403 3403 c, g dbSNP:186921183
3415 3415 a, t dbSNP:545377153
3438 3438 -, a dbSNP:748615083
3455 3455 c, t dbSNP:578071695
3456 3456 a, c, g dbSNP:78509080
3458 3458 a, g dbSNP:75280874
3485 3485 a, t dbSNP:768681982
3512 3512 a, c, g dbSNP:79457316
3521 3521 c, t dbSNP:745801203
3592 3592 c, g dbSNP:541574885

Target ORF information:

RefSeq Version NM_001242335
Organism Homo sapiens (human)
Definition Homo sapiens LIM homeobox 6 (LHX6), transcript variant 5, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_001242335

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
ATGATTGAGA ACCTCAAGAG GGCCGCCGAG AACGGGAACG GCCTCACGTT GGAGGGGGCA 
GTGCCCTCGG AACAGGACAG TCAACCCAAG CCGGCCAAGC GCGCGCGGAC GTCCTTCACC
GCGGAACAGC TGCAGGTTAT GCAGGCGCAG TTCGCGCAGG ACAACAACCC CGACGCTCAG
ACGCTGCAGA AGCTGGCGGA CATGACGGGC CTCAGCCGGA GAGTCATCCA GGTGTGGTTT
CAAAACTGCC GGGCGCGTCA TAAAAAGCAC ACGCCGCAAC ACCCAGTGCC GCCCTCGGGG
GCGCCCCCGT CCCGCCTTCC CTCCGCCCTG TCCGACGACA TCCACTACAC CCCGTTCAGC
AGCCCCGAGC GGGCGCGCAT GGTCACCCTG CACGGCTACA TTGAGAGTCA GGTACAGTGC
GGGCAGGTGC ACTGCCGGCT GCCTTACACC GCACCCCCCG TCCACCTCAA AGCCGATATG
GATGGGCCGC TCTCCAACCG GGGTGAGAAG GTCATCCTTT TTCAGTACTA A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.