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HLA-DQA1 cDNA ORF clone, Homo sapiens (human)

Gene Symbol HLA-DQA1
Entrez Gene ID 3117
Full Name major histocompatibility complex, class II, DQ alpha 1
Synonyms CD, CELIAC1, DQ-A1, GSE, HLA-DQA
General protein information
Preferred Names
HLA class II histocompatibility antigen, DQ alpha 1 chain
Names
HLA class II histocompatibility antigen, DQ alpha 1 chain
HLA-DCA
DC-alpha
DC-1 alpha chain
MHC HLA-DQ alpha
MHC class II DQA1
MHC class II antigen
leucocyte antigen DQA1
MHC class II HLA-DQ-alpha-1
leukocyte antigen alpha chain
MHC class II surface glycoprotein
MHC class II HLA-D alpha glycoprotein
HLA class II histocompatibility antigen, DQ(W3) alpha chain
Gene Type protein-coding
Organism Homo sapiens (human)
Genome

6

6p21.3

Summary HLA-DQA1 belongs to the HLA class II alpha chain paralogues. The class II molecule is a heterodimer consisting of an alpha (DQA) and a beta chain (DQB), both anchored in the membrane. It plays a central role in the immune system by presenting peptides derived from extracellular proteins. Class II molecules are expressed in antigen presenting cells (APC: B Lymphocytes, dendritic cells, macrophages). The alpha chain is approximately 33-35 kDa. It is encoded by 5 exons; exon 1 encodes the leader peptide, exons 2 and 3 encode the two extracellular domains, and exon 4 encodes the transmembrane domain and the cytoplasmic tail. Within the DQ molecule both the alpha chain and the beta chain contain the polymorphisms specifying the peptide binding specificities, resulting in up to four different molecules. Typing for these polymorphisms is routinely done for bone marrow transplantation. [provided by RefSeq, Jul 2008]. lac of sum
Disorder MIM:

146880

Disorder Html: {Celiac disease, susceptibility to}, 212750 (3)

mRNA and Protein(s)

mRNA Protein Name
XM_006715079 XP_006715142 HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X1
XM_006725484 XP_006725547 HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X4
XM_005274953 XP_005275010 HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X4
XM_011547645 XP_011545947 HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X2
XM_005275108 XP_005275165 HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X4
XM_011547876 XP_011546178 HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X3
XM_003846468 XP_003846516 HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X4
XM_006725999 XP_006726062 HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X4
XM_005275542 XP_005275599 HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X4
NM_002122 NP_002113 HLA class II histocompatibility antigen, DQ alpha 1 chain precursor



Homo sapiens (human) HLA-DQA1 NP_002113.2
Pan troglodytes (chimpanzee) PATR-DQA1 XP_003950844.1
Macaca mulatta (Rhesus monkey) HLA-DQA1 XP_001115365.1
Macaca mulatta (Rhesus monkey) MAMU-DQA1 NP_001127767.1
Bos taurus (cattle) LOC100848815 XP_003587740.1
Mus musculus (house mouse) H2-Aa NP_034508.2
Rattus norvegicus (Norway rat) RT1-Ba NP_001008831.1


GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following HLA-DQA1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the HLA-DQA1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID RefSeq Accession Definition **Vector *Turnaround time Price Select
OHu40288 XM_006715079 PREDICTED: Homo sapiens major histocompatibility complex, class II, DQ alpha 1 (HLA-DQA1), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $139.30
$199.00
OHu54837 XM_006725484 PREDICTED: Homo sapiens major histocompatibility complex, class II, DQ alpha 1 (HLA-DQA1), transcript variant X2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 5-7 $139.30
$199.00
OHu32852 XM_005274953 PREDICTED: Homo sapiens major histocompatibility complex, class II, DQ alpha 1 (HLA-DQA1), transcript variant X3, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 5-7 $139.30
$199.00
OHu58237 XM_011547645 PREDICTED: Homo sapiens major histocompatibility complex, class II, DQ alpha 1 (HLA-DQA1), transcript variant X4, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $139.30
$199.00
OHu32852 XM_005275108 PREDICTED: Homo sapiens major histocompatibility complex, class II, DQ alpha 1 (HLA-DQA1), transcript variant X5, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 5-7 $139.30
$199.00
OHu58237 XM_011547876 PREDICTED: Homo sapiens major histocompatibility complex, class II, DQ alpha 1 (HLA-DQA1), transcript variant X6, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $139.30
$199.00
OHu55023 XM_003846468 PREDICTED: Homo sapiens major histocompatibility complex, class II, DQ alpha 1 (HLA-DQA1), transcript variant X7, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $139.30
$199.00
OHu54837 XM_006725999 PREDICTED: Homo sapiens major histocompatibility complex, class II, DQ alpha 1 (HLA-DQA1), transcript variant X8, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 5-7 $139.30
$199.00
OHu55079 XM_005275542 PREDICTED: Homo sapiens major histocompatibility complex, class II, DQ alpha 1 (HLA-DQA1), transcript variant X9, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 5-7 $139.30
$199.00
OHu18636
NM_002122 Homo sapiens major histocompatibility complex, class II, DQ alpha 1 (HLA-DQA1), mRNA. pcDNA3.1+/C-(K)DYK or customized vector
in pcDNA3.1+/C-(K)DYK
$49.50-$69.30
$99.00
Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.


CloneID OHu40288
Clone ID Related Accession (Same CDS sequence) XM_006715079
Accession Version XM_006715079.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 621bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_007592.16) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 12, 2015 this sequence version replaced gi:578811643. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
ATGATCCTAA ACAAAGCTCT GCTGCTGGGG GCCCTCGCTC TGACCACCGT GATGAGCCCC 
TGTGGAGGTG AAGACATTGT GGCTGACCAC GTTGCCTCTT GTGGTGTAAA CTTGTACCAG
TTTTACGGTC CCTCTGGCCA GTACACCCAT GAATTTGATG GAGATGAGCA GTTCTACGTG
GACCTGGAGA GGAAGGAGAC TGCCTGGCGG TGGCCTGAGT TCAGCAAATT TGGAGGTTTT
GACCCGCAGG GTGCACTGAG AAACATGGCT GTGGCAAAAC ACAACTTGAA CATCATGATT
AAACGCTACA ACTCTACCGC TGCTACCAAT GAGGTTCCTG AGGTCACAGT GTTTTCCAAG
TCTCCCGTGA CACTGGGTCA GCCCAACACC CTCATTTGTC TTGTGGACAA CATCTTTCCT
CCTGTGGTCA ACATCACATG GCTGAGCAAT GGGCAGTCAG TCACAGAAGG TGTTTCTGAG
ACCAGCTTCC TCTCCAAGAG TGATCATTCC TTCTTCAAGA TCAGTTACCT CACCTTCCTC
CCTTCTGCTG ATGAGATTTA TGACTGCAAG GTGGAGCACT GGGGCCTGGA CCAGCCTCTT
CTGAAACACT GGGTTGAATG A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006715142.1
CDS64..684
Misc Feature(1)148..393(+)
Misc Feature(2)397..678(+)
Misc Feature(3)409..591(+)
Misc Feature(4)439..642(+)
Misc Feature(5)481..591(+)
Translation

Target ORF information:

RefSeq Version XM_006715079
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens major histocompatibility complex, class II, DQ alpha 1 (HLA-DQA1), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_006715079

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
ATGATCCTAA ACAAAGCTCT GCTGCTGGGG GCCCTCGCTC TGACCACCGT GATGAGCCCC 
TGTGGAGGTG AAGACATTGT GGCTGACCAC GTTGCCTCTT GTGGTGTAAA CTTGTACCAG
TTTTACGGTC CCTCTGGCCA GTACACCCAT GAATTTGATG GAGATGAGCA GTTCTACGTG
GACCTGGAGA GGAAGGAGAC TGCCTGGCGG TGGCCTGAGT TCAGCAAATT TGGAGGTTTT
GACCCGCAGG GTGCACTGAG AAACATGGCT GTGGCAAAAC ACAACTTGAA CATCATGATT
AAACGCTACA ACTCTACCGC TGCTACCAAT GAGGTTCCTG AGGTCACAGT GTTTTCCAAG
TCTCCCGTGA CACTGGGTCA GCCCAACACC CTCATTTGTC TTGTGGACAA CATCTTTCCT
CCTGTGGTCA ACATCACATG GCTGAGCAAT GGGCAGTCAG TCACAGAAGG TGTTTCTGAG
ACCAGCTTCC TCTCCAAGAG TGATCATTCC TTCTTCAAGA TCAGTTACCT CACCTTCCTC
CCTTCTGCTG ATGAGATTTA TGACTGCAAG GTGGAGCACT GGGGCCTGGA CCAGCCTCTT
CTGAAACACT GGGTTGAATG A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu54837
Clone ID Related Accession (Same CDS sequence) XM_006725484 , XM_006725999
Accession Version XM_006725484.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 765bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X4
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_113891.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 12, 2015 this sequence version replaced gi:578840832. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
ATGATCCTAA ACAAAGCTCT GATGCTGGGG GCCCTTGCCC TGACCACCGT GATGAGCCCC 
TGTGGAGGTG AAGACATTGT GGCTGACCAC GTCGCCTCTT ATGGTGTAAA CTTGTACCAG
TCTTACGGTC CCTCTGGCCA GTACACCCAT GAATTTGATG GAGATGAGCA GTTCTACGTG
GACCTGGGGA GGAAGGAGAC TGTCTGGTGT TTGCCTGTTC TCAGACAATT TAGATTTGAC
CCGCAATTTG CACTGACAAA CATCGCTGTC CTAAAACATA ACTTGAACAG TCTGATTAAA
CGCTCCAACT CTACCGCTGC TACCAATGAG GTTCCTGAGG TCACAGTGTT TTCCAAGTCT
CCCGTGACAC TGGGTCAGCC CAACATCCTC ATCTGTCTTG TGGACAACAT CTTTCCTCCT
GTGGTCAACA TCACATGGCT GAGCAATGGG CACTCAGTCA CAGAAGGTGT TTCTGAGACC
AGCTTCCTCT CCAAGAGTGA TCATTCCTTC TTCAAGATCA GTTACCTCAC CCTCCTCCCT
TCTGCTGAGG AGAGTTATGA CTGCAAGGTG GAGCACTGGG GCCTGGACAA GCCTCTTCTG
AAACACTGGG AGCCTGAGAT TCCAGCCCCT ATGTCAGAGC TCACAGAGAC TGTGGTCTGC
GCCCTGGGAT TGTCTGTGGG CCTCGTGGGC ATTGTGGTGG GCACTGTCTT CATCATCCGA
GGCCTGCGTT CAGTTGGTGC TTCCAGACAC CAAGGGCCCT TGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006725547.1
CDS65..829
Misc Feature(1)149..391(+)
Misc Feature(2)395..676(+)
Misc Feature(3)407..589(+)
Misc Feature(4)479..589(+)
Translation

Target ORF information:

RefSeq Version XM_006725484
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens major histocompatibility complex, class II, DQ alpha 1 (HLA-DQA1), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_006725484

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
ATGATCCTAA ACAAAGCTCT GATGCTGGGG GCCCTTGCCC TGACCACCGT GATGAGCCCC 
TGTGGAGGTG AAGACATTGT GGCTGACCAC GTCGCCTCTT ATGGTGTAAA CTTGTACCAG
TCTTACGGTC CCTCTGGCCA GTACACCCAT GAATTTGATG GAGATGAGCA GTTCTACGTG
GACCTGGGGA GGAAGGAGAC TGTCTGGTGT TTGCCTGTTC TCAGACAATT TAGATTTGAC
CCGCAATTTG CACTGACAAA CATCGCTGTC CTAAAACATA ACTTGAACAG TCTGATTAAA
CGCTCCAACT CTACCGCTGC TACCAATGAG GTTCCTGAGG TCACAGTGTT TTCCAAGTCT
CCCGTGACAC TGGGTCAGCC CAACATCCTC ATCTGTCTTG TGGACAACAT CTTTCCTCCT
GTGGTCAACA TCACATGGCT GAGCAATGGG CACTCAGTCA CAGAAGGTGT TTCTGAGACC
AGCTTCCTCT CCAAGAGTGA TCATTCCTTC TTCAAGATCA GTTACCTCAC CCTCCTCCCT
TCTGCTGAGG AGAGTTATGA CTGCAAGGTG GAGCACTGGG GCCTGGACAA GCCTCTTCTG
AAACACTGGG AGCCTGAGAT TCCAGCCCCT ATGTCAGAGC TCACAGAGAC TGTGGTCTGC
GCCCTGGGAT TGTCTGTGGG CCTCGTGGGC ATTGTGGTGG GCACTGTCTT CATCATCCGA
GGCCTGCGTT CAGTTGGTGC TTCCAGACAC CAAGGGCCCT TGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu32852
Clone ID Related Accession (Same CDS sequence) XM_005274953 , XM_005275108
Accession Version XM_005274953.3 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 765bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X4
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_167245.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 12, 2015 this sequence version replaced gi:578841359. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
ATGATCCTAA ACAAAGCTCT GATGCTGGGG GCCCTCGCCC TGACCACCGT GATGAGCCCT 
TGTGGAGGTG AAGACATTGT GGCTGACCAC GTTGCCTCTT ACGGTGTAAA CTTGTACCAG
TCTTACGGTC CCTCTGGCCA GTTCACCCAT GAATTTGATG GAGACGAGGA GTTCTATGTG
GACCTGGAGA GGAAGGAGAC TGTCTGGAAG TTGCCTCTGT TCCACAGACT TAGATTTGAC
CCGCAATTTG CACTGACAAA CATCGCTGTG CTAAAACATA ACTTGAACAT CCTGATTAAA
CGCTCCAACT CTACCGCTGC TACCAATGAG GTTCCTGAGG TCACAGTGTT TTCCAAGTCT
CCCGTGACAC TGGGTCAGCC CAACACCCTC ATCTGTCTTG TGGACAACAT CTTTCCTCCT
GTGGTCAACA TCACCTGGCT GAGCAATGGG CACTCAGTCA CAGAAGGTGT TTCTGAGACC
AGCTTCCTCT CCAAGAGTGA TCATTCCTTC TTCAAGATCA GTTACCTCAC CTTCCTCCCT
TCTGCTGATG AGATTTATGA CTGCAAGGTG GAGCACTGGG GCCTGGATGA GCCTCTTCTG
AAACACTGGG AGCCTGAGAT TCCAGCACCT ATGTCAGAGC TCACAGAGAC TGTGGTCTGT
GCCCTGGGGT TGTCTGTGGG CCTCGTGGGC ATTGTGGTGG GGACCGTCTT GATCATCCGA
GGCCTGCGTT CAGTTGGTGC TTCCAGACAC CAAGGGCCCT TGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005275010.1
CDS59..823
Misc Feature(1)143..385(+)
Misc Feature(2)389..670(+)
Misc Feature(3)401..583(+)
Misc Feature(4)473..583(+)
Translation

Target ORF information:

RefSeq Version XM_005274953
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens major histocompatibility complex, class II, DQ alpha 1 (HLA-DQA1), transcript variant X3, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_005274953

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
ATGATCCTAA ACAAAGCTCT GATGCTGGGG GCCCTCGCCC TGACCACCGT GATGAGCCCT 
TGTGGAGGTG AAGACATTGT GGCTGACCAC GTTGCCTCTT ACGGTGTAAA CTTGTACCAG
TCTTACGGTC CCTCTGGCCA GTTCACCCAT GAATTTGATG GAGACGAGGA GTTCTATGTG
GACCTGGAGA GGAAGGAGAC TGTCTGGAAG TTGCCTCTGT TCCACAGACT TAGATTTGAC
CCGCAATTTG CACTGACAAA CATCGCTGTG CTAAAACATA ACTTGAACAT CCTGATTAAA
CGCTCCAACT CTACCGCTGC TACCAATGAG GTTCCTGAGG TCACAGTGTT TTCCAAGTCT
CCCGTGACAC TGGGTCAGCC CAACACCCTC ATCTGTCTTG TGGACAACAT CTTTCCTCCT
GTGGTCAACA TCACCTGGCT GAGCAATGGG CACTCAGTCA CAGAAGGTGT TTCTGAGACC
AGCTTCCTCT CCAAGAGTGA TCATTCCTTC TTCAAGATCA GTTACCTCAC CTTCCTCCCT
TCTGCTGATG AGATTTATGA CTGCAAGGTG GAGCACTGGG GCCTGGATGA GCCTCTTCTG
AAACACTGGG AGCCTGAGAT TCCAGCACCT ATGTCAGAGC TCACAGAGAC TGTGGTCTGT
GCCCTGGGGT TGTCTGTGGG CCTCGTGGGC ATTGTGGTGG GGACCGTCTT GATCATCCGA
GGCCTGCGTT CAGTTGGTGC TTCCAGACAC CAAGGGCCCT TGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu58237
Clone ID Related Accession (Same CDS sequence) XM_011547645 , XM_011547876
Accession Version XM_011547645.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 624bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X2
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_167245.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
ATGATCCTAA ACAAAGCTCT GATGCTGGGG GCCCTCGCCC TGACCACCGT GATGAGCCCT 
TGTGGAGGTG AAGACATTGT GGCTGACCAC GTTGCCTCTT ACGGTGTAAA CTTGTACCAG
TCTTACGGTC CCTCTGGCCA GTTCACCCAT GAATTTGATG GAGACGAGGA GTTCTATGTG
GACCTGGAGA GGAAGGAGAC TGTCTGGAAG TTGCCTCTGT TCCACAGACT TAGATTTGAC
CCGCAATTTG CACTGACAAA CATCGCTGTG CTAAAACATA ACTTGAACAT CCTGATTAAA
CGCTCCAACT CTACCGCTGC TACCAATGAG GTTCCTGAGG TCACAGTGTT TTCCAAGTCT
CCCGTGACAC TGGGTCAGCC CAACACCCTC ATCTGTCTTG TGGACAACAT CTTTCCTCCT
GTGGTCAACA TCACCTGGCT GAGCAATGGG CACTCAGTCA CAGAAGGTGT TTCTGAGACC
AGCTTCCTCT CCAAGAGTGA TCATTCCTTC TTCAAGATCA GTTACCTCAC CTTCCTCCCT
TCTGCTGATG AGATTTATGA CTGCAAGGTG GAGCACTGGG GCCTGGATGA GCCTCTTCTG
AAACACTGGG GTGTTACCTA CTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_011545947.1
CDS59..682
Misc Feature(1)143..385(+)
Misc Feature(2)389..667(+)
Misc Feature(3)401..583(+)
Misc Feature(4)473..583(+)
Translation

Target ORF information:

RefSeq Version XM_011547645
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens major histocompatibility complex, class II, DQ alpha 1 (HLA-DQA1), transcript variant X4, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_011547645

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
ATGATCCTAA ACAAAGCTCT GATGCTGGGG GCCCTCGCCC TGACCACCGT GATGAGCCCT 
TGTGGAGGTG AAGACATTGT GGCTGACCAC GTTGCCTCTT ACGGTGTAAA CTTGTACCAG
TCTTACGGTC CCTCTGGCCA GTTCACCCAT GAATTTGATG GAGACGAGGA GTTCTATGTG
GACCTGGAGA GGAAGGAGAC TGTCTGGAAG TTGCCTCTGT TCCACAGACT TAGATTTGAC
CCGCAATTTG CACTGACAAA CATCGCTGTG CTAAAACATA ACTTGAACAT CCTGATTAAA
CGCTCCAACT CTACCGCTGC TACCAATGAG GTTCCTGAGG TCACAGTGTT TTCCAAGTCT
CCCGTGACAC TGGGTCAGCC CAACACCCTC ATCTGTCTTG TGGACAACAT CTTTCCTCCT
GTGGTCAACA TCACCTGGCT GAGCAATGGG CACTCAGTCA CAGAAGGTGT TTCTGAGACC
AGCTTCCTCT CCAAGAGTGA TCATTCCTTC TTCAAGATCA GTTACCTCAC CTTCCTCCCT
TCTGCTGATG AGATTTATGA CTGCAAGGTG GAGCACTGGG GCCTGGATGA GCCTCTTCTG
AAACACTGGG GTGTTACCTA CTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu32852
Clone ID Related Accession (Same CDS sequence) XM_005274953 , XM_005275108
Accession Version XM_005275108.3 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 765bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X4
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_167246.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 12, 2015 this sequence version replaced gi:578841636. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
ATGATCCTAA ACAAAGCTCT GATGCTGGGG GCCCTCGCCC TGACCACCGT GATGAGCCCT 
TGTGGAGGTG AAGACATTGT GGCTGACCAC GTTGCCTCTT ACGGTGTAAA CTTGTACCAG
TCTTACGGTC CCTCTGGCCA GTTCACCCAT GAATTTGATG GAGACGAGGA GTTCTATGTG
GACCTGGAGA GGAAGGAGAC TGTCTGGAAG TTGCCTCTGT TCCACAGACT TAGATTTGAC
CCGCAATTTG CACTGACAAA CATCGCTGTG CTAAAACATA ACTTGAACAT CCTGATTAAA
CGCTCCAACT CTACCGCTGC TACCAATGAG GTTCCTGAGG TCACAGTGTT TTCCAAGTCT
CCCGTGACAC TGGGTCAGCC CAACACCCTC ATCTGTCTTG TGGACAACAT CTTTCCTCCT
GTGGTCAACA TCACCTGGCT GAGCAATGGG CACTCAGTCA CAGAAGGTGT TTCTGAGACC
AGCTTCCTCT CCAAGAGTGA TCATTCCTTC TTCAAGATCA GTTACCTCAC CTTCCTCCCT
TCTGCTGATG AGATTTATGA CTGCAAGGTG GAGCACTGGG GCCTGGATGA GCCTCTTCTG
AAACACTGGG AGCCTGAGAT TCCAGCACCT ATGTCAGAGC TCACAGAGAC TGTGGTCTGT
GCCCTGGGGT TGTCTGTGGG CCTCGTGGGC ATTGTGGTGG GGACCGTCTT GATCATCCGA
GGCCTGCGTT CAGTTGGTGC TTCCAGACAC CAAGGGCCCT TGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005275165.1
CDS59..823
Misc Feature(1)143..385(+)
Misc Feature(2)389..670(+)
Misc Feature(3)401..583(+)
Misc Feature(4)473..583(+)
Translation

Target ORF information:

RefSeq Version XM_005275108
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens major histocompatibility complex, class II, DQ alpha 1 (HLA-DQA1), transcript variant X5, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_005275108

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
ATGATCCTAA ACAAAGCTCT GATGCTGGGG GCCCTCGCCC TGACCACCGT GATGAGCCCT 
TGTGGAGGTG AAGACATTGT GGCTGACCAC GTTGCCTCTT ACGGTGTAAA CTTGTACCAG
TCTTACGGTC CCTCTGGCCA GTTCACCCAT GAATTTGATG GAGACGAGGA GTTCTATGTG
GACCTGGAGA GGAAGGAGAC TGTCTGGAAG TTGCCTCTGT TCCACAGACT TAGATTTGAC
CCGCAATTTG CACTGACAAA CATCGCTGTG CTAAAACATA ACTTGAACAT CCTGATTAAA
CGCTCCAACT CTACCGCTGC TACCAATGAG GTTCCTGAGG TCACAGTGTT TTCCAAGTCT
CCCGTGACAC TGGGTCAGCC CAACACCCTC ATCTGTCTTG TGGACAACAT CTTTCCTCCT
GTGGTCAACA TCACCTGGCT GAGCAATGGG CACTCAGTCA CAGAAGGTGT TTCTGAGACC
AGCTTCCTCT CCAAGAGTGA TCATTCCTTC TTCAAGATCA GTTACCTCAC CTTCCTCCCT
TCTGCTGATG AGATTTATGA CTGCAAGGTG GAGCACTGGG GCCTGGATGA GCCTCTTCTG
AAACACTGGG AGCCTGAGAT TCCAGCACCT ATGTCAGAGC TCACAGAGAC TGTGGTCTGT
GCCCTGGGGT TGTCTGTGGG CCTCGTGGGC ATTGTGGTGG GGACCGTCTT GATCATCCGA
GGCCTGCGTT CAGTTGGTGC TTCCAGACAC CAAGGGCCCT TGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu58237
Clone ID Related Accession (Same CDS sequence) XM_011547645 , XM_011547876
Accession Version XM_011547876.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 624bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X3
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_167246.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
ATGATCCTAA ACAAAGCTCT GATGCTGGGG GCCCTCGCCC TGACCACCGT GATGAGCCCT 
TGTGGAGGTG AAGACATTGT GGCTGACCAC GTTGCCTCTT ACGGTGTAAA CTTGTACCAG
TCTTACGGTC CCTCTGGCCA GTTCACCCAT GAATTTGATG GAGACGAGGA GTTCTATGTG
GACCTGGAGA GGAAGGAGAC TGTCTGGAAG TTGCCTCTGT TCCACAGACT TAGATTTGAC
CCGCAATTTG CACTGACAAA CATCGCTGTG CTAAAACATA ACTTGAACAT CCTGATTAAA
CGCTCCAACT CTACCGCTGC TACCAATGAG GTTCCTGAGG TCACAGTGTT TTCCAAGTCT
CCCGTGACAC TGGGTCAGCC CAACACCCTC ATCTGTCTTG TGGACAACAT CTTTCCTCCT
GTGGTCAACA TCACCTGGCT GAGCAATGGG CACTCAGTCA CAGAAGGTGT TTCTGAGACC
AGCTTCCTCT CCAAGAGTGA TCATTCCTTC TTCAAGATCA GTTACCTCAC CTTCCTCCCT
TCTGCTGATG AGATTTATGA CTGCAAGGTG GAGCACTGGG GCCTGGATGA GCCTCTTCTG
AAACACTGGG GTGTTACCTA CTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_011546178.1
CDS59..682
Misc Feature(1)143..385(+)
Misc Feature(2)389..667(+)
Misc Feature(3)401..583(+)
Misc Feature(4)473..583(+)
Translation

Target ORF information:

RefSeq Version XM_011547876
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens major histocompatibility complex, class II, DQ alpha 1 (HLA-DQA1), transcript variant X6, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_011547876

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
ATGATCCTAA ACAAAGCTCT GATGCTGGGG GCCCTCGCCC TGACCACCGT GATGAGCCCT 
TGTGGAGGTG AAGACATTGT GGCTGACCAC GTTGCCTCTT ACGGTGTAAA CTTGTACCAG
TCTTACGGTC CCTCTGGCCA GTTCACCCAT GAATTTGATG GAGACGAGGA GTTCTATGTG
GACCTGGAGA GGAAGGAGAC TGTCTGGAAG TTGCCTCTGT TCCACAGACT TAGATTTGAC
CCGCAATTTG CACTGACAAA CATCGCTGTG CTAAAACATA ACTTGAACAT CCTGATTAAA
CGCTCCAACT CTACCGCTGC TACCAATGAG GTTCCTGAGG TCACAGTGTT TTCCAAGTCT
CCCGTGACAC TGGGTCAGCC CAACACCCTC ATCTGTCTTG TGGACAACAT CTTTCCTCCT
GTGGTCAACA TCACCTGGCT GAGCAATGGG CACTCAGTCA CAGAAGGTGT TTCTGAGACC
AGCTTCCTCT CCAAGAGTGA TCATTCCTTC TTCAAGATCA GTTACCTCAC CTTCCTCCCT
TCTGCTGATG AGATTTATGA CTGCAAGGTG GAGCACTGGG GCCTGGATGA GCCTCTTCTG
AAACACTGGG GTGTTACCTA CTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu55023
Clone ID Related Accession (Same CDS sequence) XM_003846468
Accession Version XM_003846468.4 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 768bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X4
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_167247.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 12, 2015 this sequence version replaced gi:578841861. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
ATGATCCTAA ACAAAGCTCT GATGCTGGGG GCCCTCGCCC TGACCACCGT GATGAGCCCT 
TGTGGAGGTG AAGACATTGT GGCTGACCAT GTTGCCTCTT ACGGTGTAAA CTTGTACCAG
TCTTATGGTC CCTCTGGGCA GTACAGCCAT GAATTTGATG GAGACGAGGA GTTCTATGTG
GACCTGGAGA GGAAGGAGAC TGTCTGGCAG TTGCCTCTGT TCCGCAGATT TAGAAGATTT
GACCCGCAAT TTGCACTGAC AAACATCGCT GTGCTAAAAC ATAACTTGAA CATCGTGATT
AAACGCTCCA ACTCTACCGC TGCTACCAAT GAGGTTCCTG AGGTCACAGT GTTTTCCAAG
TCTCCCGTGA CACTGGGTCA GCCCAACACC CTCATCTGTC TTGTGGACAA CATCTTTCCT
CCTGTGGTCA ACATCACCTG GCTGAGCAAT GGGCACTCAG TCACAGAAGG TGTTTCTGAG
ACCAGCTTCC TCTCCAAGAG TGATCATTCC TTCTTCAAGA TCAGTTACCT CACCTTCCTC
CCTTCTGATG ATGAGATTTA TGACTGCAAG GTGGAGCACT GGGGCCTGGA TGAGCCTCTT
CTGAAACACT GGGAGCCTGA GATTCCAACA CCTATGTCAG AGCTCACAGA GACTGTGGTC
TGCGCCCTGG GGTTGTCTGT GGGCCTCGTG GGCATTGTGG TGGGGACCGT CTTGATCATC
CGAGGCCTGC GTTCAGTTGG TGCTTCCAGA CACCAAGGGC CCTTGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_003846516.1
CDS65..832
Misc Feature(1)149..394(+)
Misc Feature(2)398..679(+)
Misc Feature(3)410..592(+)
Misc Feature(4)440..643(+)
Misc Feature(5)482..592(+)
Translation

Target ORF information:

RefSeq Version XM_003846468
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens major histocompatibility complex, class II, DQ alpha 1 (HLA-DQA1), transcript variant X7, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_003846468

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
ATGATCCTAA ACAAAGCTCT GATGCTGGGG GCCCTCGCCC TGACCACCGT GATGAGCCCT 
TGTGGAGGTG AAGACATTGT GGCTGACCAT GTTGCCTCTT ACGGTGTAAA CTTGTACCAG
TCTTATGGTC CCTCTGGGCA GTACAGCCAT GAATTTGATG GAGACGAGGA GTTCTATGTG
GACCTGGAGA GGAAGGAGAC TGTCTGGCAG TTGCCTCTGT TCCGCAGATT TAGAAGATTT
GACCCGCAAT TTGCACTGAC AAACATCGCT GTGCTAAAAC ATAACTTGAA CATCGTGATT
AAACGCTCCA ACTCTACCGC TGCTACCAAT GAGGTTCCTG AGGTCACAGT GTTTTCCAAG
TCTCCCGTGA CACTGGGTCA GCCCAACACC CTCATCTGTC TTGTGGACAA CATCTTTCCT
CCTGTGGTCA ACATCACCTG GCTGAGCAAT GGGCACTCAG TCACAGAAGG TGTTTCTGAG
ACCAGCTTCC TCTCCAAGAG TGATCATTCC TTCTTCAAGA TCAGTTACCT CACCTTCCTC
CCTTCTGATG ATGAGATTTA TGACTGCAAG GTGGAGCACT GGGGCCTGGA TGAGCCTCTT
CTGAAACACT GGGAGCCTGA GATTCCAACA CCTATGTCAG AGCTCACAGA GACTGTGGTC
TGCGCCCTGG GGTTGTCTGT GGGCCTCGTG GGCATTGTGG TGGGGACCGT CTTGATCATC
CGAGGCCTGC GTTCAGTTGG TGCTTCCAGA CACCAAGGGC CCTTGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu54837
Clone ID Related Accession (Same CDS sequence) XM_006725484 , XM_006725999
Accession Version XM_006725999.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 765bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X4
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_167248.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 12, 2015 this sequence version replaced gi:578842077. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
ATGATCCTAA ACAAAGCTCT GATGCTGGGG GCCCTTGCCC TGACCACCGT GATGAGCCCC 
TGTGGAGGTG AAGACATTGT GGCTGACCAC GTCGCCTCTT ATGGTGTAAA CTTGTACCAG
TCTTACGGTC CCTCTGGCCA GTACACCCAT GAATTTGATG GAGATGAGCA GTTCTACGTG
GACCTGGGGA GGAAGGAGAC TGTCTGGTGT TTGCCTGTTC TCAGACAATT TAGATTTGAC
CCGCAATTTG CACTGACAAA CATCGCTGTC CTAAAACATA ACTTGAACAG TCTGATTAAA
CGCTCCAACT CTACCGCTGC TACCAATGAG GTTCCTGAGG TCACAGTGTT TTCCAAGTCT
CCCGTGACAC TGGGTCAGCC CAACATCCTC ATCTGTCTTG TGGACAACAT CTTTCCTCCT
GTGGTCAACA TCACATGGCT GAGCAATGGG CACTCAGTCA CAGAAGGTGT TTCTGAGACC
AGCTTCCTCT CCAAGAGTGA TCATTCCTTC TTCAAGATCA GTTACCTCAC CCTCCTCCCT
TCTGCTGAGG AGAGTTATGA CTGCAAGGTG GAGCACTGGG GCCTGGACAA GCCTCTTCTG
AAACACTGGG AGCCTGAGAT TCCAGCCCCT ATGTCAGAGC TCACAGAGAC TGTGGTCTGC
GCCCTGGGAT TGTCTGTGGG CCTCGTGGGC ATTGTGGTGG GCACTGTCTT CATCATCCGA
GGCCTGCGTT CAGTTGGTGC TTCCAGACAC CAAGGGCCCT TGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006726062.1
CDS65..829
Misc Feature(1)149..391(+)
Misc Feature(2)395..676(+)
Misc Feature(3)407..589(+)
Misc Feature(4)479..589(+)
Translation

Target ORF information:

RefSeq Version XM_006725999
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens major histocompatibility complex, class II, DQ alpha 1 (HLA-DQA1), transcript variant X8, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_006725999

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
ATGATCCTAA ACAAAGCTCT GATGCTGGGG GCCCTTGCCC TGACCACCGT GATGAGCCCC 
TGTGGAGGTG AAGACATTGT GGCTGACCAC GTCGCCTCTT ATGGTGTAAA CTTGTACCAG
TCTTACGGTC CCTCTGGCCA GTACACCCAT GAATTTGATG GAGATGAGCA GTTCTACGTG
GACCTGGGGA GGAAGGAGAC TGTCTGGTGT TTGCCTGTTC TCAGACAATT TAGATTTGAC
CCGCAATTTG CACTGACAAA CATCGCTGTC CTAAAACATA ACTTGAACAG TCTGATTAAA
CGCTCCAACT CTACCGCTGC TACCAATGAG GTTCCTGAGG TCACAGTGTT TTCCAAGTCT
CCCGTGACAC TGGGTCAGCC CAACATCCTC ATCTGTCTTG TGGACAACAT CTTTCCTCCT
GTGGTCAACA TCACATGGCT GAGCAATGGG CACTCAGTCA CAGAAGGTGT TTCTGAGACC
AGCTTCCTCT CCAAGAGTGA TCATTCCTTC TTCAAGATCA GTTACCTCAC CCTCCTCCCT
TCTGCTGAGG AGAGTTATGA CTGCAAGGTG GAGCACTGGG GCCTGGACAA GCCTCTTCTG
AAACACTGGG AGCCTGAGAT TCCAGCCCCT ATGTCAGAGC TCACAGAGAC TGTGGTCTGC
GCCCTGGGAT TGTCTGTGGG CCTCGTGGGC ATTGTGGTGG GCACTGTCTT CATCATCCGA
GGCCTGCGTT CAGTTGGTGC TTCCAGACAC CAAGGGCCCT TGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu55079
Clone ID Related Accession (Same CDS sequence) XM_005275542
Accession Version XM_005275542.3 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 768bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X4
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_167249.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 12, 2015 this sequence version replaced gi:578842310. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
ATGATCCTAA ACAAAGCTCT GATGCTGGGG GCCCTCGCCC TGACCACCGT GATGAGCCCT 
TGTGGAGGTG AAGACATTGT GGCTGACCAT GTTGCCTCTT ACGGTGTAAA CTTGTACCAG
TCTTATGGTC CCTCTGGGCA GTACAGCCAT GAATTTGATG GAGACGAGGA GTTCTATGTG
GACCTGGAGA GGAAGGAGAC TGTCTGGCAG TTGCCTCTGT TCCGCAGATT TAGAAGATTT
GACCCGCAAT TTGCACTGAC AAACATCGCT GTGCTAAAAC ATAACTTGAA CATCGTGATT
AAACGCTCCA ACTCTACCGC TGCTACCAAT GAGGTTCCTG AGGTCACAGT GTTTTCCAAG
TCTCCCGTGA CACTGGGTCA GCCCAACACC CTCATCTGTC TTGTGGACAA CATCTTTCCT
CCTGTGGTCA ACATCACCTG GCTGAGCAAT GGGCACTCAG TCACAGAAGG TGTTTCTGAG
ACCAGCTTCC TCTCCAAGAG TGATCATTCC TTCTTCAAGA TCAGTTACCT CACCTTCCTC
CCTTCTGCTG ATGAGATTTA TGACTGCAAG GTGGAGCACT GGGGCCTGGA TGAGCCTCTT
CTGAAACACT GGGAGCCTGA GATTCCAACA CCTATGTCAG AGCTCACAGA GACTGTGGTC
TGCGCCCTGG GGTTGTCTGT GGGCCTCGTG GGCATTGTGG TGGGGACCGT CTTGATCATC
CGAGGCCTGC GTTCAGTTGG TGCTTCCAGA CACCAAGGGC CCTTGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005275599.1
CDS64..831
Misc Feature(1)148..393(+)
Misc Feature(2)397..678(+)
Misc Feature(3)409..591(+)
Misc Feature(4)481..591(+)
Translation

Target ORF information:

RefSeq Version XM_005275542
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens major histocompatibility complex, class II, DQ alpha 1 (HLA-DQA1), transcript variant X9, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_005275542

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
ATGATCCTAA ACAAAGCTCT GATGCTGGGG GCCCTCGCCC TGACCACCGT GATGAGCCCT 
TGTGGAGGTG AAGACATTGT GGCTGACCAT GTTGCCTCTT ACGGTGTAAA CTTGTACCAG
TCTTATGGTC CCTCTGGGCA GTACAGCCAT GAATTTGATG GAGACGAGGA GTTCTATGTG
GACCTGGAGA GGAAGGAGAC TGTCTGGCAG TTGCCTCTGT TCCGCAGATT TAGAAGATTT
GACCCGCAAT TTGCACTGAC AAACATCGCT GTGCTAAAAC ATAACTTGAA CATCGTGATT
AAACGCTCCA ACTCTACCGC TGCTACCAAT GAGGTTCCTG AGGTCACAGT GTTTTCCAAG
TCTCCCGTGA CACTGGGTCA GCCCAACACC CTCATCTGTC TTGTGGACAA CATCTTTCCT
CCTGTGGTCA ACATCACCTG GCTGAGCAAT GGGCACTCAG TCACAGAAGG TGTTTCTGAG
ACCAGCTTCC TCTCCAAGAG TGATCATTCC TTCTTCAAGA TCAGTTACCT CACCTTCCTC
CCTTCTGCTG ATGAGATTTA TGACTGCAAG GTGGAGCACT GGGGCCTGGA TGAGCCTCTT
CTGAAACACT GGGAGCCTGA GATTCCAACA CCTATGTCAG AGCTCACAGA GACTGTGGTC
TGCGCCCTGG GGTTGTCTGT GGGCCTCGTG GGCATTGTGG TGGGGACCGT CTTGATCATC
CGAGGCCTGC GTTCAGTTGG TGCTTCCAGA CACCAAGGGC CCTTGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu18636
Clone ID Related Accession (Same CDS sequence) NM_002122
Accession Version NM_002122.3 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 768bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags COA
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 15-MAR-2015
Organism Homo sapiens (human)
Product HLA class II histocompatibility antigen, DQ alpha 1 chain precursor
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AK130811.1, M20431.1, BU617246.1 and AF533896.1. This sequence is a reference standard in the RefSeqGene project. On or before Aug 31, 2013 this sequence version replaced gi:530429123, gi:18426974. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AK130838.1, AK130598.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1968189 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
421
481
541
601
661
721
ATGATCCTAA ACAAAGCTCT GCTGCTGGGG GCCCTCGCTC TGACCACCGT GATGAGCCCC 
TGTGGAGGTG AAGACATTGT GGCTGACCAC GTTGCCTCTT GTGGTGTAAA CTTGTACCAG
TTTTACGGTC CCTCTGGCCA GTACACCCAT GAATTTGATG GAGATGAGCA GTTCTACGTG
GACCTGGAGA GGAAGGAGAC TGCCTGGCGG TGGCCTGAGT TCAGCAAATT TGGAGGTTTT
GACCCGCAGG GTGCACTGAG AAACATGGCT GTGGCAAAAC ACAACTTGAA CATCATGATT
AAACGCTACA ACTCTACCGC TGCTACCAAT GAGGTTCCTG AGGTCACAGT GTTTTCCAAG
TCTCCCGTGA CACTGGGTCA GCCCAACACC CTCATTTGTC TTGTGGACAA CATCTTTCCT
CCTGTGGTCA ACATCACATG GCTGAGCAAT GGGCAGTCAG TCACAGAAGG TGTTTCTGAG
ACCAGCTTCC TCTCCAAGAG TGATCATTCC TTCTTCAAGA TCAGTTACCT CACCTTCCTC
CCTTCTGCTG ATGAGATTTA TGACTGCAAG GTGGAGCACT GGGGCCTGGA CCAGCCTCTT
CTGAAACACT GGGAGCCTGA GATTCCAGCC CCTATGTCAG AGCTCACAGA GACTGTGGTC
TGTGCCCTGG GGTTGTCTGT GGGCCTCATG GGCATTGTGG TGGGCACTGT CTTCATCATC
CAAGGCCTGC GTTCAGTTGG TGCTTCCAGA CACCAAGGGC CATTGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_002113.2
CDS54..821
Misc Feature(1)33..35(+)
Misc Feature(2)138..383(+)
Misc Feature(3)387..668(+)
Misc Feature(4)399..581(+)
Misc Feature(5)429..632(+)
Misc Feature(6)471..581(+)
Exon (1)1..135
Gene:HLA-DQA1
Gene Synonym:
Exon (2)136..384
Gene:HLA-DQA1
Gene Synonym:
Exon (3)385..666
Gene:HLA-DQA1
Gene Synonym:
Exon (4)667..841
Gene:HLA-DQA1
Gene Synonym:
Exon (5)842..1542
Gene:HLA-DQA1
Gene Synonym:
Translation

Target ORF information:

RefSeq Version NM_002122
Organism Homo sapiens (human)
Definition Homo sapiens major histocompatibility complex, class II, DQ alpha 1 (HLA-DQA1), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_002122

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
ATGATCCTAA ACAAAGCTCT GCTGCTGGGG GCCCTCGCTC TGACCACCGT GATGAGCCCC 
TGTGGAGGTG AAGACATTGT GGCTGACCAC GTTGCCTCTT GTGGTGTAAA CTTGTACCAG
TTTTACGGTC CCTCTGGCCA GTACACCCAT GAATTTGATG GAGATGAGCA GTTCTACGTG
GACCTGGAGA GGAAGGAGAC TGCCTGGCGG TGGCCTGAGT TCAGCAAATT TGGAGGTTTT
GACCCGCAGG GTGCACTGAG AAACATGGCT GTGGCAAAAC ACAACTTGAA CATCATGATT
AAACGCTACA ACTCTACCGC TGCTACCAAT GAGGTTCCTG AGGTCACAGT GTTTTCCAAG
TCTCCCGTGA CACTGGGTCA GCCCAACACC CTCATTTGTC TTGTGGACAA CATCTTTCCT
CCTGTGGTCA ACATCACATG GCTGAGCAAT GGGCAGTCAG TCACAGAAGG TGTTTCTGAG
ACCAGCTTCC TCTCCAAGAG TGATCATTCC TTCTTCAAGA TCAGTTACCT CACCTTCCTC
CCTTCTGCTG ATGAGATTTA TGACTGCAAG GTGGAGCACT GGGGCCTGGA CCAGCCTCTT
CTGAAACACT GGGAGCCTGA GATTCCAGCC CCTATGTCAG AGCTCACAGA GACTGTGGTC
TGTGCCCTGG GGTTGTCTGT GGGCCTCATG GGCATTGTGG TGGGCACTGT CTTCATCATC
CAAGGCCTGC GTTCAGTTGG TGCTTCCAGA CACCAAGGGC CATTGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

 
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