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HNF4A hepatocyte nuclear factor 4, alpha [Homo sapiens (human)]

Gene Symbol HNF4A
Entrez Gene ID 3172
Full Name hepatocyte nuclear factor 4, alpha
Synonyms FRTS4, HNF4, HNF4a7, HNF4a8, HNF4a9, HNF4alpha, MODY, MODY1, NR2A1, NR2A21, TCF, TCF14
General protein information
Preferred Names
hepatocyte nuclear factor 4-alpha
Names
hepatocyte nuclear factor 4-alpha
TCF-14
HNF4alpha10/11/12
transcription factor 14
transcription factor HNF-4
hepatic nuclear factor 4 alpha
nuclear receptor subfamily 2 group A member 1
Gene Type protein-coding
Organism Homo sapiens (human)
Genome

20

20q13.12

Summary The protein encoded by this gene is a nuclear transcription factor which binds DNA as a homodimer. The encoded protein controls the expression of several genes, including hepatocyte nuclear factor 1 alpha, a transcription factor which regulates the expression of several hepatic genes. This gene may play a role in development of the liver, kidney, and intestines. Mutations in this gene have been associated with monogenic autosomal dominant non-insulin-dependent diabetes mellitus type I. Alternative splicing of this gene results in multiple transcript variants encoding several different isoforms. [provided by RefSeq, Apr 2012]. lac of sum
Disorder MIM:

600281

Disorder Html: MODY, type I, 125850 (3); {Diabetes mellitus, noninsulin-dependent},





The following HNF4A gene sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the HNF4A gene which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

CloneID RefSeq Accession Definition **Vector *Turnaround time Price Select
OHu25204 NM_001287183 Homo sapiens hepatocyte nuclear factor 4, alpha (HNF4A), transcript variant 9, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $319
OHu58272 XM_011528797 PREDICTED: Homo sapiens hepatocyte nuclear factor 4, alpha (HNF4A), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $319
OHu58273 XM_011528798 PREDICTED: Homo sapiens hepatocyte nuclear factor 4, alpha (HNF4A), transcript variant X2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $319
OHu52995 XM_005260407 PREDICTED: Homo sapiens hepatocyte nuclear factor 4, alpha (HNF4A), transcript variant X3, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $439
OHu25247 NM_001030003 Homo sapiens hepatocyte nuclear factor 4, alpha (HNF4A), transcript variant 4, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $319
OHu25302 NM_001030004 Homo sapiens hepatocyte nuclear factor 4, alpha (HNF4A), transcript variant 6, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $319
OHu25149 NM_175914 Homo sapiens hepatocyte nuclear factor 4, alpha (HNF4A), transcript variant 5, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $379
OHu25290 NM_000457 Homo sapiens hepatocyte nuclear factor 4, alpha (HNF4A), transcript variant 2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector
in pcDNA3.1+/C-(K)DYK
$399
OHu25120 NM_178849 Homo sapiens hepatocyte nuclear factor 4, alpha (HNF4A), transcript variant 1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 5-7 $389
OHu25127 NM_178850 Homo sapiens hepatocyte nuclear factor 4, alpha (HNF4A), transcript variant 3, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $319
OHu25191 NM_001258355 Homo sapiens hepatocyte nuclear factor 4, alpha (HNF4A), transcript variant 7, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $319
OHu25252 NM_001287182 Homo sapiens hepatocyte nuclear factor 4, alpha (HNF4A), transcript variant 8, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $319
OHu25281 NM_001287184 Homo sapiens hepatocyte nuclear factor 4, alpha (HNF4A), transcript variant 10, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $319

*Business Day
**You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.


CloneID OHu25204
Accession Version NM_001287183.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1350bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector Document: User manual_GenEZ ORF Clone Products.pdf (pdf)
Clone information Clone Map
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags Document: MSDS_GenEZ ORF Clone Products.pdf (pdf)
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 15-OCT-2014
Organism Homo sapiens (human)
Product hepatocyte nuclear factor 4-alpha isoform HNF4alpha11
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AY680697.1, FJ608822.1, AL132772.14 and AW134564.1. This sequence is a reference standard in the RefSeqGene project. Summary: The protein encoded by this gene is a nuclear transcription factor which binds DNA as a homodimer. The encoded protein controls the expression of several genes, including hepatocyte nuclear factor 1 alpha, a transcription factor which regulates the expression of several hepatic genes. This gene may play a role in development of the liver, kidney, and intestines. Mutations in this gene have been associated with monogenic autosomal dominant non-insulin-dependent diabetes mellitus type I. Alternative splicing of this gene results in multiple transcript variants encoding several different isoforms. [provided by RefSeq, Apr 2012]. Transcript Variant: This variant (9) differs at the 5' end, which results in translation initiation from an alternate upstream start codon compared to variant 2. The resulting shorter isoform (HNF4alpha11) has a distinct N-terminus compared to isoform HNF4alpha2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##RefSeq-Attributes-START## inferred exon combination :: PMID: 19353766 ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
ATGTCGGACT GGGGCCAGGG CTTCCCCCAG GACCCACCAG ACACGTCCCC ATCAGAAGGC 
ACCAACCTCA ACGCGCCCAA CAGCCTGGGT GTCAGCGCCC TGTGTGCCAT CTGCGGGGAC
CGGGCCACGG GCAAACACTA CGGTGCCTCG AGCTGTGACG GCTGCAAGGG CTTCTTCCGG
AGGAGCGTGC GGAAGAACCA CATGTACTCC TGCAGATTTA GCCGGCAGTG CGTGGTGGAC
AAAGACAAGA GGAACCAGTG CCGCTACTGC AGGCTCAAGA AATGCTTCCG GGCTGGCATG
AAGAAGGAAG CCGTCCAGAA TGAGCGGGAC CGGATCAGCA CTCGAAGGTC AAGCTATGAG
GACAGCAGCC TGCCCTCCAT CAATGCGCTC CTGCAGGCGG AGGTCCTGTC CCGACAGATC
ACCTCCCCCG TCTCCGGGAT CAACGGCGAC ATTCGGGCGA AGAAGATTGC CAGCATCGCA
GATGTGTGTG AGTCCATGAA GGAGCAGCTG CTGGTTCTCG TTGAGTGGGC CAAGTACATC
CCAGCTTTCT GCGAGCTCCC CCTGGACGAC CAGGTGGCCC TGCTCAGAGC CCATGCTGGC
GAGCACCTGC TGCTCGGAGC CACCAAGAGA TCCATGGTGT TCAAGGACGT GCTGCTCCTA
GGCAATGACT ACATTGTCCC TCGGCACTGC CCGGAGCTGG CGGAGATGAG CCGGGTGTCC
ATACGCATCC TTGACGAGCT GGTGCTGCCC TTCCAGGAGC TGCAGATCGA TGACAATGAG
TATGCCTACC TCAAAGCCAT CATCTTCTTT GACCCAGATG CCAAGGGGCT GAGCGATCCA
GGGAAGATCA AGCGGCTGCG TTCCCAGGTG CAGGTGAGCT TGGAGGACTA CATCAACGAC
CGCCAGTATG ACTCGCGTGG CCGCTTTGGA GAGCTGCTGC TGCTGCTGCC CACCTTGCAG
AGCATCACCT GGCAGATGAT CGAGCAGATC CAGTTCATCA AGCTCTTCGG CATGGCCAAG
ATTGACAACC TGTTGCAGGA GATGCTGCTG GGAGGGTCCC CCAGCGATGC ACCCCATGCC
CACCACCCCC TGCACCCTCA CCTGATGCAG GAACATATGG GAACCAACGT CATCGTTGCC
AACACAATGC CCACTCACCT CAGCAACGGA CAGATGTGTG AGTGGCCCCG ACCCAGGGGA
CAGGCAGCCA CCCCTGAGAC CCCACAGCCC TCACCGCCAG GTGGCTCAGG GTCTGAGCCC
TATAAGCTCC TGCCGGGAGC CGTCGCCACA ATCGTCAAGC CCCTCTCTGC CATCCCCCAG
CCGACCATCA CCAAGCAGGA AGTTATCTAG
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeqNP_001274112.1
CDS236..1585
Misc Feature(1)122..124(+)
Misc Feature(2)338..565(+)
Misc Feature(3)338..505(+)
Misc Feature(4)356..559(+)
Misc Feature(5)449..499(+)
Misc Feature(6)611..1279(+)
Misc Feature(7)710..1234(+)
Misc Feature(8)755..1279(+)
Misc Feature(9)971..1207(+)
Exon (1)1..53
Gene:HNF4A
Gene Synonym:
Exon (2)54..275
Gene:HNF4A
Gene Synonym:
Exon (3)276..450
Gene:HNF4A
Gene Synonym:
Exon (4)451..545
Gene:HNF4A
Gene Synonym:
Exon (5)546..652
Gene:HNF4A
Gene Synonym:
Exon (6)653..808
Gene:HNF4A
Gene Synonym:
Exon (7)809..896
Gene:HNF4A
Gene Synonym:
Exon (8)897..1052
Gene:HNF4A
Gene Synonym:
Exon (9)1053..1289
Gene:HNF4A
Gene Synonym:
Exon (10)1290..1442
Gene:HNF4A
Gene Synonym:
Exon (11)1443..4765
Gene:HNF4A
Gene Synonym:
Translation
Position Chain Variation Link
1 1 a, g dbSNP:375625743
11 11 a, c dbSNP:779464983
14 14 a, g dbSNP:746433493
19 19 c, t dbSNP:772641374
26 26 c, t dbSNP:775770184
28 28 c, t dbSNP:761046168
29 29 a, g dbSNP:769394388
34 34 c, t dbSNP:772889022
37 37 a, g dbSNP:548411497
39 39 c, t dbSNP:754071908
53 53 a, g dbSNP:765862207
75 75 c, t dbSNP:113891426
78 78 c, t dbSNP:564859402
80 80 c, g dbSNP:779053525
83 83 a, c dbSNP:527367304
89 89 c, t dbSNP:547483668
107 107 c, t dbSNP:746121422
118 118 a, g dbSNP:569783548
125 125 c, t dbSNP:150728570
136 136 a, g dbSNP:758477249
140 140 c, t dbSNP:757356290
149 149 c, t dbSNP:780069025
168 168 c, t dbSNP:778796252
194 194 a, g dbSNP:745978135
210 210 c, t dbSNP:529465378
211 211 a, g dbSNP:758778895
240 240 c, t dbSNP:780566668
258 258 c, t dbSNP:8113950
259 259 a, c dbSNP:549449127
277 277 c, t dbSNP:777271181
279 279 c, t dbSNP:199796094
280 280 a, g dbSNP:765851861
294 294 a, g dbSNP:773661614
302 302 a, c dbSNP:753285226
307 307 c, t dbSNP:570058788
309 309 c, t dbSNP:140143857
310 310 a, g, t dbSNP:41282026
312 312 a, c dbSNP:763529905
322 322 a, g dbSNP:753361755
328 328 c, t dbSNP:757140477
330 330 a, g, t dbSNP:201545824
331 331 c, t dbSNP:199678287
332 332 a, c, g dbSNP:376906221
349 349 c, t dbSNP:147552575
350 350 a, g dbSNP:769007443
352 352 c, g dbSNP:781364773
357 357 a, g dbSNP:561302824
361 361 c, t dbSNP:736823
363 363 c, t dbSNP:773633446
364 364 a, g dbSNP:145845882
382 382 c, t dbSNP:201852387
385 385 a, g, t dbSNP:774781031
388 388 c, t dbSNP:763756456
394 394 c, t dbSNP:753302065
413 413 c, t dbSNP:587777732
422 422 a, g dbSNP:369182343
429 429 a, g dbSNP:765133569
436 436 c, t dbSNP:370689680
454 454 c, t dbSNP:776310756
457 457 c, t dbSNP:761295403
458 458 a, c dbSNP:780813696
459 459 a, g dbSNP:371557531
467 467 a, g, t dbSNP:772786482
478 478 a, g dbSNP:3204261
507 507 c, gg dbSNP:193922471
517 517 a, g dbSNP:766365045
525 525 a, g dbSNP:751274258
526 526 g, t dbSNP:373320902
541 541 a, g dbSNP:142116849
547 547 c, t dbSNP:138290205
548 548 a, g dbSNP:377476335
560 560 a, c, t dbSNP:370239205
566 566 c, t dbSNP:137853336
567 567 a, g dbSNP:149611886
568 568 g, t dbSNP:753828250
573 573 c, g dbSNP:757405041
575 575 a, g dbSNP:779271027
576 576 c, t dbSNP:1800961
579 579 a, g dbSNP:764196059
584 584 c, t dbSNP:780342162
586 586 a, g dbSNP:747399563
587 587 a, g dbSNP:193922472
595 595 a, g dbSNP:772959288
607 607 a, g dbSNP:193922473
610 610 c, g dbSNP:770532574
619 619 c, t dbSNP:113308087
621 621 a, c, t dbSNP:147342965
622 622 a, g dbSNP:370329321
625 625 c, g dbSNP:760556271
628 628 a, g dbSNP:764197818
633 633 c, t dbSNP:754143633
634 634 a, g dbSNP:374298096
647 647 c, t dbSNP:137853335
648 648 a, g dbSNP:765237979
649 649 a, c dbSNP:533132109
653 653 a, g dbSNP:368759794
662 662 c, t dbSNP:758036527
664 664 c, t dbSNP:569395318
665 665 a, g dbSNP:142204928
669 669 c, g dbSNP:768495780
670 670 c, t dbSNP:146307320
671 671 a, g dbSNP:747928745
674 674 a, t dbSNP:769976671
676 676 c, t dbSNP:773473316
677 677 a, g dbSNP:763010207
679 679 a, c, t dbSNP:557888367
680 680 a, g dbSNP:760038979
688 688 c, t dbSNP:767940230
689 689 c, g, t dbSNP:753072592
690 690 a, g dbSNP:142883089
693 693 c, t dbSNP:371827863
694 694 a, g dbSNP:758124162
707 707 a, g dbSNP:779555087
712 712 c, t dbSNP:746527431
713 713 a, g dbSNP:754907741
725 725 c, g dbSNP:781033951
742 742 a, g dbSNP:577918667
744 744 a, t dbSNP:201086670
749 749 a, g dbSNP:769636511
754 754 c, t dbSNP:376530197
778 778 a, g dbSNP:35078168
779 779 c, g dbSNP:193922474
787 787 c, t dbSNP:749446315
788 788 a, g dbSNP:771156648
794 794 c, t dbSNP:112945683
795 795 c, t dbSNP:201749293
802 802 c, t dbSNP:759574096
803 803 a, g dbSNP:768043933
820 820 c, g dbSNP:777099767
824 824 g, t dbSNP:762312899
826 826 c, t dbSNP:766035524
835 835 c, t dbSNP:751231466
836 836 a, g dbSNP:753476712
850 850 a, c, t dbSNP:759084238
859 859 a, c dbSNP:754623231
873 873 c, t dbSNP:752216751
877 877 c, t dbSNP:755998338
882 882 a, t dbSNP:777727657
883 883 c, t dbSNP:376586083
884 884 a, c, g, t dbSNP:202105574
886 886 gct, tcaa dbSNP:193922476
887 887 c, t dbSNP:772349653
895 895 a, g dbSNP:139591750
898 898 a, c dbSNP:748537070
900 900 a, g dbSNP:770348231
908 908 a, g dbSNP:773402510
917 917 c, t dbSNP:376013528
922 922 c, t dbSNP:150078978
924 924 g, t dbSNP:775178928
928 928 a, g dbSNP:760173369
936 936 c, t dbSNP:145542196
937 937 a, g dbSNP:776127911
947 947 c, t dbSNP:761602960
948 948 g, t dbSNP:200985945
949 949 a, c, g dbSNP:372639360
950 950 a, g dbSNP:139779712
952 952 a, g dbSNP:145280017
970 970 c, t dbSNP:6031592
971 971 a, g dbSNP:781364316
987 987 c, t dbSNP:748284293
989 989 c, t dbSNP:137853334
993 993 a, c dbSNP:756539709
994 994 c, g dbSNP:193922477
1006 1006 c, t dbSNP:141943140
1017 1017 a, g, t dbSNP:748714111
1020 1020 c, g dbSNP:746602886
1023 1023 a, t dbSNP:768316428
1025 1025 a, g dbSNP:6093980
1029 1029 a, g dbSNP:775961355
1066 1066 a, g dbSNP:181559088
1067 1067 a, g dbSNP:201777208
1069 1069 c, t dbSNP:757774160
1070 1070 a, g dbSNP:145902391
1084 1084 c, g dbSNP:746259207
1088 1088 c, t dbSNP:768263630
1089 1089 a, g, t dbSNP:371124358
1091 1091 c, t dbSNP:769417218
1093 1093 a, g dbSNP:772605539
1096 1096 c, t dbSNP:539311311
1101 1101 a, t dbSNP:771015255
1105 1105 -, g dbSNP:770549079
1108 1108 c, g dbSNP:774250260
1114 1114 c, g dbSNP:759446088
1132 1132 a, c, t dbSNP:186151007
1134 1134 -, ccc dbSNP:146497108
1137 1137 a, g dbSNP:753027685
1138 1138 a, c, g dbSNP:760811566
1142 1142 c, t dbSNP:753881645
1143 1143 a, g dbSNP:751457664
1147 1147 c, t dbSNP:151168174
1149 1149 c, g, t dbSNP:779433584
1150 1150 a, g, t dbSNP:140146223
1151 1151 c, t dbSNP:193922479
1152 1152 a, g dbSNP:369429452
1157 1157 c, t dbSNP:193922480
1164 1164 g, t dbSNP:777290134
1168 1168 -, gct dbSNP:776489992
1175 1175 c, t dbSNP:748839686
1214 1214 a, g dbSNP:770962344
1216 1216 c, t dbSNP:534709673
1217 1217 c, g dbSNP:759399251
1225 1225 c, g, t dbSNP:150247632
1228 1228 a, g dbSNP:760902451
1237 1237 a, g dbSNP:138874078
1238 1238 c, g dbSNP:776656815
1241 1241 c, t dbSNP:761927262
1243 1243 c, t dbSNP:142268325
1244 1244 a, g dbSNP:555432665
1246 1246 c, g dbSNP:758836138
1247 1247 a, g dbSNP:766712393
1252 1252 c, t dbSNP:751892618
1256 1256 a, g dbSNP:755751378
1257 1257 c, t dbSNP:777332317
1258 1258 a, t dbSNP:145880201
1263 1263 a, g dbSNP:756892403
1278 1278 g, t dbSNP:137853338
1291 1291 a, g dbSNP:771448170
1295 1295 c, g, t dbSNP:201319115
1296 1296 c, t dbSNP:369301806
1299 1299 a, g dbSNP:760091853
1300 1300 c, t dbSNP:767934753
1302 1302 a, g dbSNP:565460600
1307 1307 a, c dbSNP:761517690
1309 1309 c, t dbSNP:267605945
1312 1312 c, t dbSNP:765018556
1314 1314 c, t dbSNP:200760863
1315 1315 a, c dbSNP:757901790
1321 1321 a, c dbSNP:372765956
1323 1323 a, c, g dbSNP:193922469
1350 1350 a, g dbSNP:780920425
1353 1353 c, t dbSNP:199956600
1356 1356 a, g dbSNP:769972803
1363 1363 c, t dbSNP:61737145
1364 1364 a, g dbSNP:137853337
1369 1369 c, t dbSNP:749375393
1370 1370 a, g dbSNP:377151067
1376 1376 a, g dbSNP:774500766
1377 1377 a, g dbSNP:759909412
1379 1379 a, g dbSNP:772736726
1382 1382 a, g dbSNP:530264224
1383 1383 c, t dbSNP:761166336
1386 1386 a, c, t dbSNP:148745312
1387 1387 a, c dbSNP:750106349
1391 1391 a, c dbSNP:762669064
1402 1402 c, t dbSNP:141448616
1403 1403 a, g dbSNP:757897768
1411 1411 a, g dbSNP:550287415
1413 1413 c, g dbSNP:193922470
1425 1425 a, g dbSNP:202073574
1427 1427 c, t dbSNP:752467976
1434 1434 a, g, t dbSNP:755961897
1446 1446 c, t dbSNP:375150423
1449 1449 c, t dbSNP:6031602
1469 1469 c, t dbSNP:150776703
1471 1471 a, g, t dbSNP:3746576
1474 1474 a, c dbSNP:753697717
1476 1476 g, t dbSNP:748399403
1483 1483 a, c dbSNP:757388599
1493 1493 c, t dbSNP:1063239
1497 1497 a, g dbSNP:541597911
1508 1508 c, t dbSNP:758614339
1510 1510 a, g dbSNP:377052026
1516 1516 a, c, t dbSNP:530389600
1517 1517 a, g dbSNP:776824742
1519 1519 c, t dbSNP:748590780
1520 1520 a, g dbSNP:371405335
1526 1526 a, g dbSNP:774111430
1528 1528 c, t dbSNP:199884828
1529 1529 a, c, g dbSNP:145314165
1531 1531 a, c dbSNP:760563887
1542 1542 c, t dbSNP:764131853
1547 1547 a, g dbSNP:147638455
1552 1552 c, g dbSNP:757133445
1554 1554 a, g dbSNP:371132556
1555 1555 a, g dbSNP:750605792
1557 1557 c, t dbSNP:374856505
1558 1558 a, g dbSNP:780234320
1563 1563 c, t dbSNP:747118735
1565 1565 a, c dbSNP:755410149
1571 1571 c, t dbSNP:781747330
1574 1574 a, g dbSNP:748452860
1586 1586 a, c dbSNP:201330472
1589 1589 a, g dbSNP:193922468
1591 1591 c, t dbSNP:745467816
1592 1592 a, g dbSNP:186057842
1599 1599 -, t dbSNP:778598065
1600 1600 c, t dbSNP:774946064
1607 1607 c, t dbSNP:760278026
1610 1610 c, t dbSNP:768461125
1618 1618 c, g dbSNP:776697151
1619 1619 a, c dbSNP:761660235
1625 1625 a, c, g dbSNP:765022455
1626 1626 c, t dbSNP:763229129
1630 1630 c, t dbSNP:766749757
1661 1661 a, g, t dbSNP:11574743
1673 1673 c, t dbSNP:368269334
1723 1723 g, t dbSNP:189021164
1729 1729 a, g dbSNP:758563381
1730 1730 a, t dbSNP:200905283
1740 1740 a, g dbSNP:41280258
1744 1744 c, t dbSNP:372267883
1752 1752 a, t dbSNP:11574744
1764 1764 c, t dbSNP:375531386
1765 1765 a, g dbSNP:568037328
1781 1781 a, c dbSNP:781309225
1790 1790 g, t dbSNP:79556791
1792 1792 c, g dbSNP:77241436
1804 1804 g, t dbSNP:752507527
1813 1813 c, t dbSNP:368812069
1827 1827 c, t dbSNP:41282030
1856 1856 c, t dbSNP:11574745
1862 1862 a, c, t dbSNP:149998598
1866 1866 g, t dbSNP:535253422
1878 1878 a, g, t dbSNP:771184618
1890 1890 a, g dbSNP:56343153
1900 1900 a, g dbSNP:575245692
1911 1911 a, t dbSNP:544107343
1935 1935 c, t dbSNP:557365502
1945 1945 c, t dbSNP:186247245
1950 1950 a, g dbSNP:745994702
1977 1977 g, t dbSNP:11086926
1978 1978 a, g dbSNP:190373692
2012 2012 g, t dbSNP:144306069
2017 2017 a, g dbSNP:528538602
2031 2031 a, g dbSNP:548013860
2106 2106 a, g dbSNP:111466682
2111 2111 c, t dbSNP:530757862
2153 2153 a, g dbSNP:142417840
2157 2157 a, c dbSNP:761017274
2175 2175 a, g dbSNP:182948721
2199 2199 -, c dbSNP:377438371
2216 2216 c, t dbSNP:539420495
2219 2219 a, g dbSNP:558148858
2234 2234 a, g dbSNP:546250091
2242 2242 a, g dbSNP:3212209
2272 2272 c, t dbSNP:186263782
2285 2285 c, t dbSNP:114764820
2319 2319 c, t dbSNP:781146027
2328 2328 a, g dbSNP:190998330
2338 2338 -, cc dbSNP:533628234
2349 2349 c, t dbSNP:537782818
2370 2370 a, g dbSNP:557646293
2383 2383 a, g dbSNP:762455549
2424 2424 a, g dbSNP:146872823
2451 2451 c, t dbSNP:546202459
2491 2491 a, c, t dbSNP:3212210
2492 2492 a, g dbSNP:541914675
2517 2517 -, gaggaagaatggtgtggga dbSNP:766784440
2518 2518 -, gaggaagaatggtgtggga dbSNP:113151070
2522 2522 -, aagaatggtgtgggagagg dbSNP:72137187
2522 2522 a, g dbSNP:199960698
2554 2554 a, g dbSNP:561584948
2562 2562 c, g dbSNP:367907885
2584 2584 c, g dbSNP:768250110
2598 2598 a, g dbSNP:767537996
2605 2605 a, g dbSNP:183246640
2632 2632 a, t dbSNP:114300820
2653 2653 c, t dbSNP:189064084
2654 2654 a, g dbSNP:752736483
2663 2663 a, g dbSNP:573432571
2672 2672 c, g dbSNP:540463510
2672 2672 -, g dbSNP:201949427
2674 2674 -, g dbSNP:749515492
2680 2680 a, g dbSNP:192208246
2691 2691 a, g dbSNP:753675648
2712 2712 c, t dbSNP:757386171
2717 2717 c, t dbSNP:6130615
2728 2728 a, g dbSNP:745916958
2741 2741 a, g dbSNP:140700826
2742 2742 a, c dbSNP:144534776
2835 2835 a, g dbSNP:776986023
2857 2857 c, t dbSNP:772201090
2861 2861 c, t dbSNP:558596485
2878 2878 c, t dbSNP:182919150
2884 2884 -, tcctccct dbSNP:3834658
2884 2884 -, tcctccct dbSNP:397840964
2894 2894 c, t dbSNP:780536345
2938 2938 c, t dbSNP:557247391
2948 2948 c, t dbSNP:769165584
2949 2949 a, g dbSNP:187923731
2953 2953 c, t dbSNP:765577569
2980 2980 c, t dbSNP:568456380
3033 3033 a, c dbSNP:553377991
3057 3057 c, t dbSNP:6103734
3073 3073 c, t dbSNP:572889729
3077 3077 c, t dbSNP:191802763
3145 3145 a, c dbSNP:184324368
3146 3146 c, t dbSNP:762268655
3272 3272 c, t dbSNP:770458305
3300 3300 -, agg dbSNP:768698665
3300 3300 a, g dbSNP:189107638
3358 3358 a, g dbSNP:544409770
3364 3364 -, g dbSNP:549193414
3368 3368 g, t dbSNP:564110189
3405 3405 g, t dbSNP:533285929
3407 3407 a, g dbSNP:368930947
3412 3412 a, g dbSNP:540153780
3413 3413 a, g dbSNP:759101859
3417 3417 a, g dbSNP:4812832
3485 3485 c, t dbSNP:528906469
3522 3522 g, t dbSNP:764268817
3530 3530 c, t dbSNP:548955829
3560 3560 a, g dbSNP:140719706
3581 3581 a, g dbSNP:192144605
3591 3591 c, t dbSNP:150112206
3612 3612 a, g dbSNP:537789084
3642 3642 c, t dbSNP:751533730
3658 3658 c, g dbSNP:752256167
3738 3738 c, t dbSNP:760628227
3748 3748 c, t dbSNP:764110762
3767 3767 a, g dbSNP:138556808
3778 3778 c, t dbSNP:148871044
3816 3816 c, t dbSNP:532748454
3833 3833 c, t dbSNP:553258114
3837 3837 c, g dbSNP:545314214
3841 3841 c, g dbSNP:537829031
3846 3846 a, c dbSNP:535477938
3847 3847 a, g dbSNP:375374469
3918 3918 c, t dbSNP:762096625
3940 3940 c, t dbSNP:555307252
3943 3943 a, t dbSNP:557732423
3947 3947 g, t dbSNP:575366181
3950 3950 g, t dbSNP:537930559
3951 3951 c, g dbSNP:3212211
3959 3959 c, g dbSNP:373068234
4006 4006 c, t dbSNP:765367052
4018 4018 a, g dbSNP:185388702
4065 4065 c, t dbSNP:560466546
4118 4118 a, g dbSNP:76705771
4123 4123 g, t dbSNP:3212212
4140 4140 a, g dbSNP:750712699
4144 4144 a, g dbSNP:758625843
4157 4157 g, t dbSNP:527521356
4158 4158 g, t dbSNP:780051318
4172 4172 a, c dbSNP:3212213
4193 4193 c, t dbSNP:747113436
4229 4229 c, t dbSNP:11698414
4241 4241 a, g dbSNP:146992858
4258 4258 c, t dbSNP:370576653
4263 4263 -, tcttttt dbSNP:770066410
4263 4263 -, tt dbSNP:761222838
4263 4263 c, t dbSNP:3212214
4264 4264 -, t dbSNP:763408425
4282 4282 -, ttttttt dbSNP:568934867
4288 4288 -, t dbSNP:11450239
4288 4288 -, t dbSNP:398035765
4356 4356 a, g dbSNP:562455396
4364 4364 a, c dbSNP:755438203
4371 4371 c, t dbSNP:113417800
4381 4381 -, ac dbSNP:548863430
4396 4396 g, t dbSNP:781742192
4399 4399 a, g dbSNP:748438530
4424 4424 g, t dbSNP:551178163
4477 4477 a, t dbSNP:190730430
4577 4577 c, t dbSNP:770250175
4583 4583 a, g dbSNP:568592149
4585 4585 a, g dbSNP:529373041
4598 4598 a, g dbSNP:773868595
4602 4602 a, c, t dbSNP:377181880
4603 4603 a, g dbSNP:533361991
4637 4637 a, g dbSNP:546761850
4640 4640 a, c dbSNP:745444170
4653 4653 c, t dbSNP:753843962
4671 4671 c, t dbSNP:551080524
4687 4687 g, t dbSNP:775086593
4713 4713 -, tg dbSNP:760095436
4724 4724 -, a dbSNP:141563916
4728 4728 g, t dbSNP:535731605
4733 4733 c, t dbSNP:548993228
4738 4738 a, c dbSNP:569302875
4751 4751 a, g dbSNP:369168365

Target ORF information:

RefSeq Version NM_001287183
Organism Homo sapiens (human)
Definition Homo sapiens hepatocyte nuclear factor 4, alpha (HNF4A), transcript variant 9, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_001287183

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
ATGTCGGACT GGGGCCAGGG CTTCCCCCAG GACCCACCAG ACACGTCCCC ATCAGAAGGC 
ACCAACCTCA ACGCGCCCAA CAGCCTGGGT GTCAGCGCCC TGTGTGCCAT CTGCGGGGAC
CGGGCCACGG GCAAACACTA CGGTGCCTCG AGCTGTGACG GCTGCAAGGG CTTCTTCCGG
AGGAGCGTGC GGAAGAACCA CATGTACTCC TGCAGATTTA GCCGGCAGTG CGTGGTGGAC
AAAGACAAGA GGAACCAGTG CCGCTACTGC AGGCTCAAGA AATGCTTCCG GGCTGGCATG
AAGAAGGAAG CCGTCCAGAA TGAGCGGGAC CGGATCAGCA CTCGAAGGTC AAGCTATGAG
GACAGCAGCC TGCCCTCCAT CAATGCGCTC CTGCAGGCGG AGGTCCTGTC CCGACAGATC
ACCTCCCCCG TCTCCGGGAT CAACGGCGAC ATTCGGGCGA AGAAGATTGC CAGCATCGCA
GATGTGTGTG AGTCCATGAA GGAGCAGCTG CTGGTTCTCG TTGAGTGGGC CAAGTACATC
CCAGCTTTCT GCGAGCTCCC CCTGGACGAC CAGGTGGCCC TGCTCAGAGC CCATGCTGGC
GAGCACCTGC TGCTCGGAGC CACCAAGAGA TCCATGGTGT TCAAGGACGT GCTGCTCCTA
GGCAATGACT ACATTGTCCC TCGGCACTGC CCGGAGCTGG CGGAGATGAG CCGGGTGTCC
ATACGCATCC TTGACGAGCT GGTGCTGCCC TTCCAGGAGC TGCAGATCGA TGACAATGAG
TATGCCTACC TCAAAGCCAT CATCTTCTTT GACCCAGATG CCAAGGGGCT GAGCGATCCA
GGGAAGATCA AGCGGCTGCG TTCCCAGGTG CAGGTGAGCT TGGAGGACTA CATCAACGAC
CGCCAGTATG ACTCGCGTGG CCGCTTTGGA GAGCTGCTGC TGCTGCTGCC CACCTTGCAG
AGCATCACCT GGCAGATGAT CGAGCAGATC CAGTTCATCA AGCTCTTCGG CATGGCCAAG
ATTGACAACC TGTTGCAGGA GATGCTGCTG GGAGGGTCCC CCAGCGATGC ACCCCATGCC
CACCACCCCC TGCACCCTCA CCTGATGCAG GAACATATGG GAACCAACGT CATCGTTGCC
AACACAATGC CCACTCACCT CAGCAACGGA CAGATGTGTG AGTGGCCCCG ACCCAGGGGA
CAGGCAGCCA CCCCTGAGAC CCCACAGCCC TCACCGCCAG GTGGCTCAGG GTCTGAGCCC
TATAAGCTCC TGCCGGGAGC CGTCGCCACA ATCGTCAAGC CCCTCTCTGC CATCCCCCAG
CCGACCATCA CCAAGCAGGA AGTTATCTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu58272
Accession Version XM_011528797.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1443bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector Document: User manual_GenEZ ORF Clone Products.pdf (pdf)
Clone information Clone Map
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags Document: MSDS_GenEZ ORF Clone Products.pdf (pdf)
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product hepatocyte nuclear factor 4-alpha isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_011362.11) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
ATGCAGGACT CTGTTGTTGC CACTCACCAA GTGAGATTCA TATCAGCAAC ATGTCCGTTT 
GTCTCTGAGC AGATTTTGTT GCCGCTGCGT CTCGCCAGAT TGAGGCATCC CCTCCGACAT
CACTGGAGCA TATCTGGAGG GGTGGACAGT TCTCCACAGG GAGACACGTC CCCATCAGAA
GGCACCAACC TCAACGCGCC CAACAGCCTG GGTGTCAGCG CCCTGTGTGC CATCTGCGGG
GACCGGGCCA CGGGCAAACA CTACGGTGCC TCGAGCTGTG ACGGCTGCAA GGGCTTCTTC
CGGAGGAGCG TGCGGAAGAA CCACATGTAC TCCTGCAGAT TTAGCCGGCA GTGCGTGGTG
GACAAAGACA AGAGGAACCA GTGCCGCTAC TGCAGGCTCA AGAAATGCTT CCGGGCTGGC
ATGAAGAAGG AAGCCGTCCA GAATGAGCGG GACCGGATCA GCACTCGAAG GTCAAGCTAT
GAGGACAGCA GCCTGCCCTC CATCAATGCG CTCCTGCAGG CGGAGGTCCT GTCCCGACAG
ATCACCTCCC CCGTCTCCGG GATCAACGGC GACATTCGGG CGAAGAAGAT TGCCAGCATC
GCAGATGTGT GTGAGTCCAT GAAGGAGCAG CTGCTGGTTC TCGTTGAGTG GGCCAAGTAC
ATCCCAGCTT TCTGCGAGCT CCCCCTGGAC GACCAGGTGG CCCTGCTCAG AGCCCATGCT
GGCGAGCACC TGCTGCTCGG AGCCACCAAG AGATCCATGG TGTTCAAGGA CGTGCTGCTC
CTAGGCAATG ACTACATTGT CCCTCGGCAC TGCCCGGAGC TGGCGGAGAT GAGCCGGGTG
TCCATACGCA TCCTTGACGA GCTGGTGCTG CCCTTCCAGG AGCTGCAGAT CGATGACAAT
GAGTATGCCT ACCTCAAAGC CATCATCTTC TTTGACCCAG ATGCCAAGGG GCTGAGCGAT
CCAGGGAAGA TCAAGCGGCT GCGTTCCCAG GTGCAGGTGA GCTTGGAGGA CTACATCAAC
GACCGCCAGT ATGACTCGCG TGGCCGCTTT GGAGAGCTGC TGCTGCTGCT GCCCACCTTG
CAGAGCATCA CCTGGCAGAT GATCGAGCAG ATCCAGTTCA TCAAGCTCTT CGGCATGGCC
AAGATTGACA ACCTGTTGCA GGAGATGCTG CTGGGAGGGT CCCCCAGCGA TGCACCCCAT
GCCCACCACC CCCTGCACCC TCACCTGATG CAGGAACATA TGGGAACCAA CGTCATCGTT
GCCAACACAA TGCCCACTCA CCTCAGCAAC GGACAGATGT CCACCCCTGA GACCCCACAG
CCCTCACCGC CAGGTGGCTC AGGGTCTGAG CCCTATAAGC TCCTGCCGGG AGCCGTCGCC
ACAATCGTCA AGCCCCTCTC TGCCATCCCC CAGCCGACCA TCACCAAGCA GGAAGTTATC
TAG
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeqXP_011527099.1
CDS16..1458
Misc Feature(1)241..468(+)
Misc Feature(2)241..408(+)
Misc Feature(3)259..462(+)
Misc Feature(4)352..402(+)
Misc Feature(5)514..1182(+)
Misc Feature(6)613..1137(+)
Misc Feature(7)658..1182(+)
Misc Feature(8)874..1110(+)
Translation
Position Chain Variation Link
11 11 c, t dbSNP:568743694
19 19 c, t dbSNP:537625805
30 30 c, t dbSNP:557673469
35 35 c, t dbSNP:577528070
55 55 a, g dbSNP:368027314
56 56 c, t dbSNP:767889047
57 57 a, g dbSNP:753307309
58 58 a, t dbSNP:756431538
59 59 c, g dbSNP:778134686
67 67 -, tgtccgtt dbSNP:758915820
72 72 a, g dbSNP:754271243
93 93 c, g, t dbSNP:758079111
95 95 c, t dbSNP:746482984
98 98 c, t dbSNP:768327289
99 99 a, g dbSNP:372041644
100 100 c, t dbSNP:748180394
103 103 a, c, t dbSNP:769620848
104 104 a, g dbSNP:754042731
109 109 a, g, t dbSNP:573523251
111 111 c, t dbSNP:759600856
115 115 c, t dbSNP:767705804
116 116 g, t dbSNP:752726625
118 118 a, g dbSNP:542742235
119 119 a, g dbSNP:764535198
120 120 a, g dbSNP:754220058
130 130 c, t dbSNP:757731931
131 131 a, g dbSNP:187118966
135 135 c, t dbSNP:751311624
146 146 c, t dbSNP:531178712
162 162 c, t dbSNP:368909707
165 165 -, t dbSNP:777736369
177 177 a, c dbSNP:747623361
180 180 c, t dbSNP:777271181
182 182 c, t dbSNP:199796094
183 183 a, g dbSNP:765851861
197 197 a, g dbSNP:773661614
205 205 a, c dbSNP:753285226
210 210 c, t dbSNP:570058788
212 212 c, t dbSNP:140143857
213 213 a, g, t dbSNP:41282026
215 215 a, c dbSNP:763529905
225 225 a, g dbSNP:753361755
231 231 c, t dbSNP:757140477
233 233 a, g, t dbSNP:201545824
234 234 c, t dbSNP:199678287
235 235 a, c, g dbSNP:376906221
252 252 c, t dbSNP:147552575
253 253 a, g dbSNP:769007443
255 255 c, g dbSNP:781364773
260 260 a, g dbSNP:561302824
264 264 c, t dbSNP:736823
266 266 c, t dbSNP:773633446
267 267 a, g dbSNP:145845882
285 285 c, t dbSNP:201852387
288 288 a, g, t dbSNP:774781031
291 291 c, t dbSNP:763756456
297 297 c, t dbSNP:753302065
316 316 c, t dbSNP:587777732
325 325 a, g dbSNP:369182343
332 332 a, g dbSNP:765133569
339 339 c, t dbSNP:370689680
357 357 c, t dbSNP:776310756
360 360 c, t dbSNP:761295403
361 361 a, c dbSNP:780813696
362 362 a, g dbSNP:371557531
370 370 a, g, t dbSNP:772786482
381 381 a, g dbSNP:3204261
410 410 c, gg dbSNP:193922471
420 420 a, g dbSNP:766365045
428 428 a, g dbSNP:751274258
429 429 g, t dbSNP:373320902
444 444 a, g dbSNP:142116849
450 450 c, t dbSNP:138290205
451 451 a, g dbSNP:377476335
463 463 a, c, t dbSNP:370239205
469 469 c, t dbSNP:137853336
470 470 a, g dbSNP:149611886
471 471 g, t dbSNP:753828250
476 476 c, g dbSNP:757405041
478 478 a, g dbSNP:779271027
479 479 c, t dbSNP:1800961
482 482 a, g dbSNP:764196059
487 487 c, t dbSNP:780342162
489 489 a, g dbSNP:747399563
490 490 a, g dbSNP:193922472
498 498 a, g dbSNP:772959288
510 510 a, g dbSNP:193922473
513 513 c, g dbSNP:770532574
522 522 c, t dbSNP:113308087
524 524 a, c, t dbSNP:147342965
525 525 a, g dbSNP:370329321
528 528 c, g dbSNP:760556271
531 531 a, g dbSNP:764197818
536 536 c, t dbSNP:754143633
537 537 a, g dbSNP:374298096
550 550 c, t dbSNP:137853335
551 551 a, g dbSNP:765237979
552 552 a, c dbSNP:533132109
556 556 a, g dbSNP:368759794
565 565 c, t dbSNP:758036527
567 567 c, t dbSNP:569395318
568 568 a, g dbSNP:142204928
572 572 c, g dbSNP:768495780
573 573 c, t dbSNP:146307320
574 574 a, g dbSNP:747928745
577 577 a, t dbSNP:769976671
579 579 c, t dbSNP:773473316
580 580 a, g dbSNP:763010207
582 582 a, c, t dbSNP:557888367
583 583 a, g dbSNP:760038979
591 591 c, t dbSNP:767940230
592 592 c, g, t dbSNP:753072592
593 593 a, g dbSNP:142883089
596 596 c, t dbSNP:371827863
597 597 a, g dbSNP:758124162
610 610 a, g dbSNP:779555087
615 615 c, t dbSNP:746527431
616 616 a, g dbSNP:754907741
628 628 c, g dbSNP:781033951
645 645 a, g dbSNP:577918667
647 647 a, t dbSNP:201086670
652 652 a, g dbSNP:769636511
657 657 c, t dbSNP:376530197
681 681 a, g dbSNP:35078168
682 682 c, g dbSNP:193922474
690 690 c, t dbSNP:749446315
691 691 a, g dbSNP:771156648
697 697 c, t dbSNP:112945683
698 698 c, t dbSNP:201749293
705 705 c, t dbSNP:759574096
706 706 a, g dbSNP:768043933
723 723 c, g dbSNP:777099767
727 727 g, t dbSNP:762312899
729 729 c, t dbSNP:766035524
738 738 c, t dbSNP:751231466
739 739 a, g dbSNP:753476712
753 753 a, c, t dbSNP:759084238
762 762 a, c dbSNP:754623231
776 776 c, t dbSNP:752216751
780 780 c, t dbSNP:755998338
785 785 a, t dbSNP:777727657
786 786 c, t dbSNP:376586083
787 787 a, c, g, t dbSNP:202105574
789 789 gct, tcaa dbSNP:193922476
790 790 c, t dbSNP:772349653
798 798 a, g dbSNP:139591750
801 801 a, c dbSNP:748537070
803 803 a, g dbSNP:770348231
811 811 a, g dbSNP:773402510
820 820 c, t dbSNP:376013528
825 825 c, t dbSNP:150078978
827 827 g, t dbSNP:775178928
831 831 a, g dbSNP:760173369
839 839 c, t dbSNP:145542196
840 840 a, g dbSNP:776127911
850 850 c, t dbSNP:761602960
851 851 g, t dbSNP:200985945
852 852 a, c, g dbSNP:372639360
853 853 a, g dbSNP:139779712
855 855 a, g dbSNP:145280017
873 873 c, t dbSNP:6031592
874 874 a, g dbSNP:781364316
890 890 c, t dbSNP:748284293
892 892 c, t dbSNP:137853334
896 896 a, c dbSNP:756539709
897 897 c, g dbSNP:193922477
909 909 c, t dbSNP:141943140
920 920 a, g, t dbSNP:748714111
923 923 c, g dbSNP:746602886
926 926 a, t dbSNP:768316428
928 928 a, g dbSNP:6093980
932 932 a, g dbSNP:775961355
969 969 a, g dbSNP:181559088
970 970 a, g dbSNP:201777208
972 972 c, t dbSNP:757774160
973 973 a, g dbSNP:145902391
987 987 c, g dbSNP:746259207
991 991 c, t dbSNP:768263630
992 992 a, g, t dbSNP:371124358
994 994 c, t dbSNP:769417218
996 996 a, g dbSNP:772605539
999 999 c, t dbSNP:539311311
1004 1004 a, t dbSNP:771015255
1008 1008 -, g dbSNP:770549079
1011 1011 c, g dbSNP:774250260
1017 1017 c, g dbSNP:759446088
1035 1035 a, c, t dbSNP:186151007
1037 1037 -, ccc dbSNP:146497108
1040 1040 a, g dbSNP:753027685
1041 1041 a, c, g dbSNP:760811566
1045 1045 c, t dbSNP:753881645
1046 1046 a, g dbSNP:751457664
1050 1050 c, t dbSNP:151168174
1052 1052 c, g, t dbSNP:779433584
1053 1053 a, g, t dbSNP:140146223
1054 1054 c, t dbSNP:193922479
1055 1055 a, g dbSNP:369429452
1060 1060 c, t dbSNP:193922480
1067 1067 g, t dbSNP:777290134
1071 1071 -, gct dbSNP:776489992
1078 1078 c, t dbSNP:748839686
1117 1117 a, g dbSNP:770962344
1119 1119 c, t dbSNP:534709673
1120 1120 c, g dbSNP:759399251
1128 1128 c, g, t dbSNP:150247632
1131 1131 a, g dbSNP:760902451
1140 1140 a, g dbSNP:138874078
1141 1141 c, g dbSNP:776656815
1144 1144 c, t dbSNP:761927262
1146 1146 c, t dbSNP:142268325
1147 1147 a, g dbSNP:555432665
1149 1149 c, g dbSNP:758836138
1150 1150 a, g dbSNP:766712393
1155 1155 c, t dbSNP:751892618
1159 1159 a, g dbSNP:755751378
1160 1160 c, t dbSNP:777332317
1161 1161 a, t dbSNP:145880201
1166 1166 a, g dbSNP:756892403
1181 1181 g, t dbSNP:137853338
1194 1194 a, g dbSNP:771448170
1198 1198 c, g, t dbSNP:201319115
1199 1199 c, t dbSNP:369301806
1202 1202 a, g dbSNP:760091853
1203 1203 c, t dbSNP:767934753
1205 1205 a, g dbSNP:565460600
1210 1210 a, c dbSNP:761517690
1212 1212 c, t dbSNP:267605945
1215 1215 c, t dbSNP:765018556
1217 1217 c, t dbSNP:200760863
1218 1218 a, c dbSNP:757901790
1224 1224 a, c dbSNP:372765956
1226 1226 a, c, g dbSNP:193922469
1253 1253 a, g dbSNP:780920425
1256 1256 c, t dbSNP:199956600
1259 1259 a, g dbSNP:769972803
1266 1266 c, t dbSNP:61737145
1267 1267 a, g dbSNP:137853337
1272 1272 c, t dbSNP:749375393
1273 1273 a, g dbSNP:377151067
1279 1279 a, g dbSNP:774500766
1280 1280 a, g dbSNP:759909412
1282 1282 a, g dbSNP:772736726
1285 1285 a, g dbSNP:530264224
1286 1286 c, t dbSNP:761166336
1289 1289 a, c, t dbSNP:148745312
1290 1290 a, c dbSNP:750106349
1294 1294 a, c dbSNP:762669064
1305 1305 c, t dbSNP:141448616
1306 1306 a, g dbSNP:757897768
1314 1314 a, g dbSNP:550287415
1319 1319 c, t dbSNP:375150423
1322 1322 c, t dbSNP:6031602
1342 1342 c, t dbSNP:150776703
1344 1344 a, g, t dbSNP:3746576
1347 1347 a, c dbSNP:753697717
1349 1349 g, t dbSNP:748399403
1356 1356 a, c dbSNP:757388599
1366 1366 c, t dbSNP:1063239
1370 1370 a, g dbSNP:541597911
1381 1381 c, t dbSNP:758614339
1383 1383 a, g dbSNP:377052026
1389 1389 a, c, t dbSNP:530389600
1390 1390 a, g dbSNP:776824742
1392 1392 c, t dbSNP:748590780
1393 1393 a, g dbSNP:371405335
1399 1399 a, g dbSNP:774111430
1401 1401 c, t dbSNP:199884828
1402 1402 a, c, g dbSNP:145314165
1404 1404 a, c dbSNP:760563887
1415 1415 c, t dbSNP:764131853
1420 1420 a, g dbSNP:147638455
1425 1425 c, g dbSNP:757133445
1427 1427 a, g dbSNP:371132556
1428 1428 a, g dbSNP:750605792
1430 1430 c, t dbSNP:374856505
1431 1431 a, g dbSNP:780234320
1436 1436 c, t dbSNP:747118735
1438 1438 a, c dbSNP:755410149
1444 1444 c, t dbSNP:781747330
1447 1447 a, g dbSNP:748452860
1459 1459 a, c dbSNP:201330472
1462 1462 a, g dbSNP:193922468
1464 1464 c, t dbSNP:745467816
1465 1465 a, g dbSNP:186057842
1472 1472 -, t dbSNP:778598065
1473 1473 c, t dbSNP:774946064
1480 1480 c, t dbSNP:760278026
1483 1483 c, t dbSNP:768461125
1491 1491 c, g dbSNP:776697151
1492 1492 a, c dbSNP:761660235
1498 1498 a, c, g dbSNP:765022455
1499 1499 c, t dbSNP:763229129
1503 1503 c, t dbSNP:766749757
1534 1534 a, g, t dbSNP:11574743
1546 1546 c, t dbSNP:368269334
1596 1596 g, t dbSNP:189021164
1602 1602 a, g dbSNP:758563381
1603 1603 a, t dbSNP:200905283
1613 1613 a, g dbSNP:41280258
1617 1617 c, t dbSNP:372267883
1625 1625 a, t dbSNP:11574744
1637 1637 c, t dbSNP:375531386
1638 1638 a, g dbSNP:568037328
1654 1654 a, c dbSNP:781309225
1663 1663 g, t dbSNP:79556791
1665 1665 c, g dbSNP:77241436
1677 1677 g, t dbSNP:752507527
1686 1686 c, t dbSNP:368812069
1700 1700 c, t dbSNP:41282030
1729 1729 c, t dbSNP:11574745
1735 1735 a, c, t dbSNP:149998598
1739 1739 g, t dbSNP:535253422
1751 1751 a, g, t dbSNP:771184618
1763 1763 a, g dbSNP:56343153
1773 1773 a, g dbSNP:575245692
1784 1784 a, t dbSNP:544107343
1808 1808 c, t dbSNP:557365502
1818 1818 c, t dbSNP:186247245
1823 1823 a, g dbSNP:745994702
1850 1850 g, t dbSNP:11086926
1851 1851 a, g dbSNP:190373692
1885 1885 g, t dbSNP:144306069
1890 1890 a, g dbSNP:528538602
1904 1904 a, g dbSNP:548013860
1979 1979 a, g dbSNP:111466682
1984 1984 c, t dbSNP:530757862
2026 2026 a, g dbSNP:142417840
2030 2030 a, c dbSNP:761017274
2048 2048 a, g dbSNP:182948721
2072 2072 -, c dbSNP:377438371
2089 2089 c, t dbSNP:539420495
2092 2092 a, g dbSNP:558148858
2107 2107 a, g dbSNP:546250091
2115 2115 a, g dbSNP:3212209
2145 2145 c, t dbSNP:186263782
2158 2158 c, t dbSNP:114764820
2192 2192 c, t dbSNP:781146027
2201 2201 a, g dbSNP:190998330
2211 2211 -, cc dbSNP:533628234
2222 2222 c, t dbSNP:537782818
2243 2243 a, g dbSNP:557646293
2256 2256 a, g dbSNP:762455549
2297 2297 a, g dbSNP:146872823
2324 2324 c, t dbSNP:546202459
2364 2364 a, c, t dbSNP:3212210
2365 2365 a, g dbSNP:541914675
2390 2390 -, gaggaagaatggtgtggga dbSNP:766784440
2391 2391 -, gaggaagaatggtgtggga dbSNP:113151070
2395 2395 -, aagaatggtgtgggagagg dbSNP:72137187
2395 2395 a, g dbSNP:199960698
2427 2427 a, g dbSNP:561584948
2435 2435 c, g dbSNP:367907885
2457 2457 c, g dbSNP:768250110
2471 2471 a, g dbSNP:767537996
2478 2478 a, g dbSNP:183246640
2505 2505 a, t dbSNP:114300820
2526 2526 c, t dbSNP:189064084
2527 2527 a, g dbSNP:752736483
2536 2536 a, g dbSNP:573432571
2545 2545 c, g dbSNP:540463510
2545 2545 -, g dbSNP:201949427
2547 2547 -, g dbSNP:749515492
2553 2553 a, g dbSNP:192208246
2564 2564 a, g dbSNP:753675648
2585 2585 c, t dbSNP:757386171
2590 2590 c, t dbSNP:6130615
2601 2601 a, g dbSNP:745916958
2614 2614 a, g dbSNP:140700826
2615 2615 a, c dbSNP:144534776
2708 2708 a, g dbSNP:776986023
2730 2730 c, t dbSNP:772201090
2734 2734 c, t dbSNP:558596485
2751 2751 c, t dbSNP:182919150
2757 2757 -, tcctccct dbSNP:3834658
2757 2757 -, tcctccct dbSNP:397840964
2767 2767 c, t dbSNP:780536345
2811 2811 c, t dbSNP:557247391
2821 2821 c, t dbSNP:769165584
2822 2822 a, g dbSNP:187923731
2826 2826 c, t dbSNP:765577569
2853 2853 c, t dbSNP:568456380
2906 2906 a, c dbSNP:553377991
2930 2930 c, t dbSNP:6103734
2946 2946 c, t dbSNP:572889729
2950 2950 c, t dbSNP:191802763
3018 3018 a, c dbSNP:184324368
3019 3019 c, t dbSNP:762268655
3145 3145 c, t dbSNP:770458305
3173 3173 -, agg dbSNP:768698665
3173 3173 a, g dbSNP:189107638
3231 3231 a, g dbSNP:544409770
3237 3237 -, g dbSNP:549193414
3241 3241 g, t dbSNP:564110189
3278 3278 g, t dbSNP:533285929
3280 3280 a, g dbSNP:368930947
3285 3285 a, g dbSNP:540153780
3286 3286 a, g dbSNP:759101859
3290 3290 a, g dbSNP:4812832
3358 3358 c, t dbSNP:528906469
3395 3395 g, t dbSNP:764268817
3403 3403 c, t dbSNP:548955829
3433 3433 a, g dbSNP:140719706
3454 3454 a, g dbSNP:192144605
3464 3464 c, t dbSNP:150112206
3485 3485 a, g dbSNP:537789084
3515 3515 c, t dbSNP:751533730
3531 3531 c, g dbSNP:752256167
3611 3611 c, t dbSNP:760628227
3621 3621 c, t dbSNP:764110762
3640 3640 a, g dbSNP:138556808
3651 3651 c, t dbSNP:148871044
3689 3689 c, t dbSNP:532748454
3706 3706 c, t dbSNP:553258114
3710 3710 c, g dbSNP:545314214
3714 3714 c, g dbSNP:537829031
3719 3719 a, c dbSNP:535477938
3720 3720 a, g dbSNP:375374469
3791 3791 c, t dbSNP:762096625
3813 3813 c, t dbSNP:555307252
3816 3816 a, t dbSNP:557732423
3820 3820 g, t dbSNP:575366181
3823 3823 g, t dbSNP:537930559
3824 3824 c, g dbSNP:3212211
3832 3832 c, g dbSNP:373068234
3879 3879 c, t dbSNP:765367052
3891 3891 a, g dbSNP:185388702
3938 3938 c, t dbSNP:560466546
3991 3991 a, g dbSNP:76705771
3996 3996 g, t dbSNP:3212212
4013 4013 a, g dbSNP:750712699
4017 4017 a, g dbSNP:758625843
4030 4030 g, t dbSNP:527521356
4031 4031 g, t dbSNP:780051318
4045 4045 a, c dbSNP:3212213
4066 4066 c, t dbSNP:747113436
4102 4102 c, t dbSNP:11698414
4114 4114 a, g dbSNP:146992858
4131 4131 c, t dbSNP:370576653
4136 4136 -, tcttttt dbSNP:770066410
4136 4136 -, tt dbSNP:761222838
4136 4136 c, t dbSNP:3212214
4137 4137 -, t dbSNP:763408425
4155 4155 -, ttttttt dbSNP:568934867
4161 4161 -, t dbSNP:11450239
4161 4161 -, t dbSNP:398035765
4229 4229 a, g dbSNP:562455396
4237 4237 a, c dbSNP:755438203
4244 4244 c, t dbSNP:113417800
4254 4254 -, ac dbSNP:548863430
4269 4269 g, t dbSNP:781742192
4272 4272 a, g dbSNP:748438530
4297 4297 g, t dbSNP:551178163
4350 4350 a, t dbSNP:190730430
4450 4450 c, t dbSNP:770250175
4456 4456 a, g dbSNP:568592149
4458 4458 a, g dbSNP:529373041
4471 4471 a, g dbSNP:773868595
4475 4475 a, c, t dbSNP:377181880
4476 4476 a, g dbSNP:533361991
4510 4510 a, g dbSNP:546761850
4513 4513 a, c dbSNP:745444170
4526 4526 c, t dbSNP:753843962
4544 4544 c, t dbSNP:551080524
4560 4560 g, t dbSNP:775086593
4586 4586 -, tg dbSNP:760095436
4597 4597 -, a dbSNP:141563916
4601 4601 g, t dbSNP:535731605
4606 4606 c, t dbSNP:548993228
4611 4611 a, c dbSNP:569302875
4624 4624 a, g dbSNP:369168365

Target ORF information:

RefSeq Version XM_011528797
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens hepatocyte nuclear factor 4, alpha (HNF4A), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_011528797

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
ATGCAGGACT CTGTTGTTGC CACTCACCAA GTGAGATTCA TATCAGCAAC ATGTCCGTTT 
GTCTCTGAGC AGATTTTGTT GCCGCTGCGT CTCGCCAGAT TGAGGCATCC CCTCCGACAT
CACTGGAGCA TATCTGGAGG GGTGGACAGT TCTCCACAGG GAGACACGTC CCCATCAGAA
GGCACCAACC TCAACGCGCC CAACAGCCTG GGTGTCAGCG CCCTGTGTGC CATCTGCGGG
GACCGGGCCA CGGGCAAACA CTACGGTGCC TCGAGCTGTG ACGGCTGCAA GGGCTTCTTC
CGGAGGAGCG TGCGGAAGAA CCACATGTAC TCCTGCAGAT TTAGCCGGCA GTGCGTGGTG
GACAAAGACA AGAGGAACCA GTGCCGCTAC TGCAGGCTCA AGAAATGCTT CCGGGCTGGC
ATGAAGAAGG AAGCCGTCCA GAATGAGCGG GACCGGATCA GCACTCGAAG GTCAAGCTAT
GAGGACAGCA GCCTGCCCTC CATCAATGCG CTCCTGCAGG CGGAGGTCCT GTCCCGACAG
ATCACCTCCC CCGTCTCCGG GATCAACGGC GACATTCGGG CGAAGAAGAT TGCCAGCATC
GCAGATGTGT GTGAGTCCAT GAAGGAGCAG CTGCTGGTTC TCGTTGAGTG GGCCAAGTAC
ATCCCAGCTT TCTGCGAGCT CCCCCTGGAC GACCAGGTGG CCCTGCTCAG AGCCCATGCT
GGCGAGCACC TGCTGCTCGG AGCCACCAAG AGATCCATGG TGTTCAAGGA CGTGCTGCTC
CTAGGCAATG ACTACATTGT CCCTCGGCAC TGCCCGGAGC TGGCGGAGAT GAGCCGGGTG
TCCATACGCA TCCTTGACGA GCTGGTGCTG CCCTTCCAGG AGCTGCAGAT CGATGACAAT
GAGTATGCCT ACCTCAAAGC CATCATCTTC TTTGACCCAG ATGCCAAGGG GCTGAGCGAT
CCAGGGAAGA TCAAGCGGCT GCGTTCCCAG GTGCAGGTGA GCTTGGAGGA CTACATCAAC
GACCGCCAGT ATGACTCGCG TGGCCGCTTT GGAGAGCTGC TGCTGCTGCT GCCCACCTTG
CAGAGCATCA CCTGGCAGAT GATCGAGCAG ATCCAGTTCA TCAAGCTCTT CGGCATGGCC
AAGATTGACA ACCTGTTGCA GGAGATGCTG CTGGGAGGGT CCCCCAGCGA TGCACCCCAT
GCCCACCACC CCCTGCACCC TCACCTGATG CAGGAACATA TGGGAACCAA CGTCATCGTT
GCCAACACAA TGCCCACTCA CCTCAGCAAC GGACAGATGT CCACCCCTGA GACCCCACAG
CCCTCACCGC CAGGTGGCTC AGGGTCTGAG CCCTATAAGC TCCTGCCGGG AGCCGTCGCC
ACAATCGTCA AGCCCCTCTC TGCCATCCCC CAGCCGACCA TCACCAAGCA GGAAGTTATC
TAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu58273
Accession Version XM_011528798.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1473bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector Document: User manual_GenEZ ORF Clone Products.pdf (pdf)
Clone information Clone Map
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags Document: MSDS_GenEZ ORF Clone Products.pdf (pdf)
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product hepatocyte nuclear factor 4-alpha isoform X2
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_011362.11) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
ATGCAGGACT CTGTTGTTGC CACTCACCAA GTGAGATTCA TATCAGCAAC ATGTCCGTTT 
GTCTCTGAGC AGATTTTGTT GCCGCTGCGT CTCGCCAGAT TGAGGCATCC CCTCCGACAT
CACTGGAGCA TATCTGGAGG GGTGGACAGT TCTCCACAGG GAGACACGTC CCCATCAGAA
GGCACCAACC TCAACGCGCC CAACAGCCTG GGTGTCAGCG CCCTGTGTGC CATCTGCGGG
GACCGGGCCA CGGGCAAACA CTACGGTGCC TCGAGCTGTG ACGGCTGCAA GGGCTTCTTC
CGGAGGAGCG TGCGGAAGAA CCACATGTAC TCCTGCAGAT TTAGCCGGCA GTGCGTGGTG
GACAAAGACA AGAGGAACCA GTGCCGCTAC TGCAGGCTCA AGAAATGCTT CCGGGCTGGC
ATGAAGAAGG AAGCCGTCCA GAATGAGCGG GACCGGATCA GCACTCGAAG GTCAAGCTAT
GAGGACAGCA GCCTGCCCTC CATCAATGCG CTCCTGCAGG CGGAGGTCCT GTCCCGACAG
ATCACCTCCC CCGTCTCCGG GATCAACGGC GACATTCGGG CGAAGAAGAT TGCCAGCATC
GCAGATGTGT GTGAGTCCAT GAAGGAGCAG CTGCTGGTTC TCGTTGAGTG GGCCAAGTAC
ATCCCAGCTT TCTGCGAGCT CCCCCTGGAC GACCAGGTGG CCCTGCTCAG AGCCCATGCT
GGCGAGCACC TGCTGCTCGG AGCCACCAAG AGATCCATGG TGTTCAAGGA CGTGCTGCTC
CTAGGCAATG ACTACATTGT CCCTCGGCAC TGCCCGGAGC TGGCGGAGAT GAGCCGGGTG
TCCATACGCA TCCTTGACGA GCTGGTGCTG CCCTTCCAGG AGCTGCAGAT CGATGACAAT
GAGTATGCCT ACCTCAAAGC CATCATCTTC TTTGACCCAG ATGCCAAGGG GCTGAGCGAT
CCAGGGAAGA TCAAGCGGCT GCGTTCCCAG GTGCAGGTGA GCTTGGAGGA CTACATCAAC
GACCGCCAGT ATGACTCGCG TGGCCGCTTT GGAGAGCTGC TGCTGCTGCT GCCCACCTTG
CAGAGCATCA CCTGGCAGAT GATCGAGCAG ATCCAGTTCA TCAAGCTCTT CGGCATGGCC
AAGATTGACA ACCTGTTGCA GGAGATGCTG CTGGGAGGGT CCCCCAGCGA TGCACCCCAT
GCCCACCACC CCCTGCACCC TCACCTGATG CAGGAACATA TGGGAACCAA CGTCATCGTT
GCCAACACAA TGCCCACTCA CCTCAGCAAC GGACAGATGT GTGAGTGGCC CCGACCCAGG
GGACAGGCAG CCACCCCTGA GACCCCACAG CCCTCACCGC CAGGTGGCTC AGGGTCTGAG
CCCTATAAGC TCCTGCCGGG AGCCGTCGCC ACAATCGTCA AGCCCCTCTC TGCCATCCCC
CAGCCGACCA TCACCAAGCA GGAAGTTATC TAG
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeqXP_011527100.1
CDS166..1638
Misc Feature(1)391..618(+)
Misc Feature(2)391..558(+)
Misc Feature(3)409..612(+)
Misc Feature(4)502..552(+)
Misc Feature(5)664..1332(+)
Misc Feature(6)763..1287(+)
Misc Feature(7)808..1332(+)
Misc Feature(8)1024..1260(+)
Translation
Position Chain Variation Link
106 106 g, t dbSNP:566706011
123 123 c, t dbSNP:763942692
133 133 c, t dbSNP:115786018
135 135 c, g dbSNP:535963541
137 137 c, t dbSNP:555405118
161 161 c, t dbSNP:568743694
169 169 c, t dbSNP:537625805
180 180 c, t dbSNP:557673469
185 185 c, t dbSNP:577528070
205 205 a, g dbSNP:368027314
206 206 c, t dbSNP:767889047
207 207 a, g dbSNP:753307309
208 208 a, t dbSNP:756431538
209 209 c, g dbSNP:778134686
217 217 -, tgtccgtt dbSNP:758915820
222 222 a, g dbSNP:754271243
243 243 c, g, t dbSNP:758079111
245 245 c, t dbSNP:746482984
248 248 c, t dbSNP:768327289
249 249 a, g dbSNP:372041644
250 250 c, t dbSNP:748180394
253 253 a, c, t dbSNP:769620848
254 254 a, g dbSNP:754042731
259 259 a, g, t dbSNP:573523251
261 261 c, t dbSNP:759600856
265 265 c, t dbSNP:767705804
266 266 g, t dbSNP:752726625
268 268 a, g dbSNP:542742235
269 269 a, g dbSNP:764535198
270 270 a, g dbSNP:754220058
280 280 c, t dbSNP:757731931
281 281 a, g dbSNP:187118966
285 285 c, t dbSNP:751311624
296 296 c, t dbSNP:531178712
312 312 c, t dbSNP:368909707
315 315 -, t dbSNP:777736369
327 327 a, c dbSNP:747623361
330 330 c, t dbSNP:777271181
332 332 c, t dbSNP:199796094
333 333 a, g dbSNP:765851861
347 347 a, g dbSNP:773661614
355 355 a, c dbSNP:753285226
360 360 c, t dbSNP:570058788
362 362 c, t dbSNP:140143857
363 363 a, g, t dbSNP:41282026
365 365 a, c dbSNP:763529905
375 375 a, g dbSNP:753361755
381 381 c, t dbSNP:757140477
383 383 a, g, t dbSNP:201545824
384 384 c, t dbSNP:199678287
385 385 a, c, g dbSNP:376906221
402 402 c, t dbSNP:147552575
403 403 a, g dbSNP:769007443
405 405 c, g dbSNP:781364773
410 410 a, g dbSNP:561302824
414 414 c, t dbSNP:736823
416 416 c, t dbSNP:773633446
417 417 a, g dbSNP:145845882
435 435 c, t dbSNP:201852387
438 438 a, g, t dbSNP:774781031
441 441 c, t dbSNP:763756456
447 447 c, t dbSNP:753302065
466 466 c, t dbSNP:587777732
475 475 a, g dbSNP:369182343
482 482 a, g dbSNP:765133569
489 489 c, t dbSNP:370689680
507 507 c, t dbSNP:776310756
510 510 c, t dbSNP:761295403
511 511 a, c dbSNP:780813696
512 512 a, g dbSNP:371557531
520 520 a, g, t dbSNP:772786482
531 531 a, g dbSNP:3204261
560 560 c, gg dbSNP:193922471
570 570 a, g dbSNP:766365045
578 578 a, g dbSNP:751274258
579 579 g, t dbSNP:373320902
594 594 a, g dbSNP:142116849
600 600 c, t dbSNP:138290205
601 601 a, g dbSNP:377476335
613 613 a, c, t dbSNP:370239205
619 619 c, t dbSNP:137853336
620 620 a, g dbSNP:149611886
621 621 g, t dbSNP:753828250
626 626 c, g dbSNP:757405041
628 628 a, g dbSNP:779271027
629 629 c, t dbSNP:1800961
632 632 a, g dbSNP:764196059
637 637 c, t dbSNP:780342162
639 639 a, g dbSNP:747399563
640 640 a, g dbSNP:193922472
648 648 a, g dbSNP:772959288
660 660 a, g dbSNP:193922473
663 663 c, g dbSNP:770532574
672 672 c, t dbSNP:113308087
674 674 a, c, t dbSNP:147342965
675 675 a, g dbSNP:370329321
678 678 c, g dbSNP:760556271
681 681 a, g dbSNP:764197818
686 686 c, t dbSNP:754143633
687 687 a, g dbSNP:374298096
700 700 c, t dbSNP:137853335
701 701 a, g dbSNP:765237979
702 702 a, c dbSNP:533132109
706 706 a, g dbSNP:368759794
715 715 c, t dbSNP:758036527
717 717 c, t dbSNP:569395318
718 718 a, g dbSNP:142204928
722 722 c, g dbSNP:768495780
723 723 c, t dbSNP:146307320
724 724 a, g dbSNP:747928745
727 727 a, t dbSNP:769976671
729 729 c, t dbSNP:773473316
730 730 a, g dbSNP:763010207
732 732 a, c, t dbSNP:557888367
733 733 a, g dbSNP:760038979
741 741 c, t dbSNP:767940230
742 742 c, g, t dbSNP:753072592
743 743 a, g dbSNP:142883089
746 746 c, t dbSNP:371827863
747 747 a, g dbSNP:758124162
760 760 a, g dbSNP:779555087
765 765 c, t dbSNP:746527431
766 766 a, g dbSNP:754907741
778 778 c, g dbSNP:781033951
795 795 a, g dbSNP:577918667
797 797 a, t dbSNP:201086670
802 802 a, g dbSNP:769636511
807 807 c, t dbSNP:376530197
831 831 a, g dbSNP:35078168
832 832 c, g dbSNP:193922474
840 840 c, t dbSNP:749446315
841 841 a, g dbSNP:771156648
847 847 c, t dbSNP:112945683
848 848 c, t dbSNP:201749293
855 855 c, t dbSNP:759574096
856 856 a, g dbSNP:768043933
873 873 c, g dbSNP:777099767
877 877 g, t dbSNP:762312899
879 879 c, t dbSNP:766035524
888 888 c, t dbSNP:751231466
889 889 a, g dbSNP:753476712
903 903 a, c, t dbSNP:759084238
912 912 a, c dbSNP:754623231
926 926 c, t dbSNP:752216751
930 930 c, t dbSNP:755998338
935 935 a, t dbSNP:777727657
936 936 c, t dbSNP:376586083
937 937 a, c, g, t dbSNP:202105574
939 939 gct, tcaa dbSNP:193922476
940 940 c, t dbSNP:772349653
948 948 a, g dbSNP:139591750
951 951 a, c dbSNP:748537070
953 953 a, g dbSNP:770348231
961 961 a, g dbSNP:773402510
970 970 c, t dbSNP:376013528
975 975 c, t dbSNP:150078978
977 977 g, t dbSNP:775178928
981 981 a, g dbSNP:760173369
989 989 c, t dbSNP:145542196
990 990 a, g dbSNP:776127911
1000 1000 c, t dbSNP:761602960
1001 1001 g, t dbSNP:200985945
1002 1002 a, c, g dbSNP:372639360
1003 1003 a, g dbSNP:139779712
1005 1005 a, g dbSNP:145280017
1023 1023 c, t dbSNP:6031592
1024 1024 a, g dbSNP:781364316
1040 1040 c, t dbSNP:748284293
1042 1042 c, t dbSNP:137853334
1046 1046 a, c dbSNP:756539709
1047 1047 c, g dbSNP:193922477
1059 1059 c, t dbSNP:141943140
1070 1070 a, g, t dbSNP:748714111
1073 1073 c, g dbSNP:746602886
1076 1076 a, t dbSNP:768316428
1078 1078 a, g dbSNP:6093980
1082 1082 a, g dbSNP:775961355
1119 1119 a, g dbSNP:181559088
1120 1120 a, g dbSNP:201777208
1122 1122 c, t dbSNP:757774160
1123 1123 a, g dbSNP:145902391
1137 1137 c, g dbSNP:746259207
1141 1141 c, t dbSNP:768263630
1142 1142 a, g, t dbSNP:371124358
1144 1144 c, t dbSNP:769417218
1146 1146 a, g dbSNP:772605539
1149 1149 c, t dbSNP:539311311
1154 1154 a, t dbSNP:771015255
1158 1158 -, g dbSNP:770549079
1161 1161 c, g dbSNP:774250260
1167 1167 c, g dbSNP:759446088
1185 1185 a, c, t dbSNP:186151007
1187 1187 -, ccc dbSNP:146497108
1190 1190 a, g dbSNP:753027685
1191 1191 a, c, g dbSNP:760811566
1195 1195 c, t dbSNP:753881645
1196 1196 a, g dbSNP:751457664
1200 1200 c, t dbSNP:151168174
1202 1202 c, g, t dbSNP:779433584
1203 1203 a, g, t dbSNP:140146223
1204 1204 c, t dbSNP:193922479
1205 1205 a, g dbSNP:369429452
1210 1210 c, t dbSNP:193922480
1217 1217 g, t dbSNP:777290134
1221 1221 -, gct dbSNP:776489992
1228 1228 c, t dbSNP:748839686
1267 1267 a, g dbSNP:770962344
1269 1269 c, t dbSNP:534709673
1270 1270 c, g dbSNP:759399251
1278 1278 c, g, t dbSNP:150247632
1281 1281 a, g dbSNP:760902451
1290 1290 a, g dbSNP:138874078
1291 1291 c, g dbSNP:776656815
1294 1294 c, t dbSNP:761927262
1296 1296 c, t dbSNP:142268325
1297 1297 a, g dbSNP:555432665
1299 1299 c, g dbSNP:758836138
1300 1300 a, g dbSNP:766712393
1305 1305 c, t dbSNP:751892618
1309 1309 a, g dbSNP:755751378
1310 1310 c, t dbSNP:777332317
1311 1311 a, t dbSNP:145880201
1316 1316 a, g dbSNP:756892403
1331 1331 g, t dbSNP:137853338
1344 1344 a, g dbSNP:771448170
1348 1348 c, g, t dbSNP:201319115
1349 1349 c, t dbSNP:369301806
1352 1352 a, g dbSNP:760091853
1353 1353 c, t dbSNP:767934753
1355 1355 a, g dbSNP:565460600
1360 1360 a, c dbSNP:761517690
1362 1362 c, t dbSNP:267605945
1365 1365 c, t dbSNP:765018556
1367 1367 c, t dbSNP:200760863
1368 1368 a, c dbSNP:757901790
1374 1374 a, c dbSNP:372765956
1376 1376 a, c, g dbSNP:193922469
1403 1403 a, g dbSNP:780920425
1406 1406 c, t dbSNP:199956600
1409 1409 a, g dbSNP:769972803
1416 1416 c, t dbSNP:61737145
1417 1417 a, g dbSNP:137853337
1422 1422 c, t dbSNP:749375393
1423 1423 a, g dbSNP:377151067
1429 1429 a, g dbSNP:774500766
1430 1430 a, g dbSNP:759909412
1432 1432 a, g dbSNP:772736726
1435 1435 a, g dbSNP:530264224
1436 1436 c, t dbSNP:761166336
1439 1439 a, c, t dbSNP:148745312
1440 1440 a, c dbSNP:750106349
1444 1444 a, c dbSNP:762669064
1455 1455 c, t dbSNP:141448616
1456 1456 a, g dbSNP:757897768
1464 1464 a, g dbSNP:550287415
1466 1466 c, g dbSNP:193922470
1478 1478 a, g dbSNP:202073574
1480 1480 c, t dbSNP:752467976
1487 1487 a, g, t dbSNP:755961897
1499 1499 c, t dbSNP:375150423
1502 1502 c, t dbSNP:6031602
1522 1522 c, t dbSNP:150776703
1524 1524 a, g, t dbSNP:3746576
1527 1527 a, c dbSNP:753697717
1529 1529 g, t dbSNP:748399403
1536 1536 a, c dbSNP:757388599
1546 1546 c, t dbSNP:1063239
1550 1550 a, g dbSNP:541597911
1561 1561 c, t dbSNP:758614339
1563 1563 a, g dbSNP:377052026
1569 1569 a, c, t dbSNP:530389600
1570 1570 a, g dbSNP:776824742
1572 1572 c, t dbSNP:748590780
1573 1573 a, g dbSNP:371405335
1579 1579 a, g dbSNP:774111430
1581 1581 c, t dbSNP:199884828
1582 1582 a, c, g dbSNP:145314165
1584 1584 a, c dbSNP:760563887
1595 1595 c, t dbSNP:764131853
1600 1600 a, g dbSNP:147638455
1605 1605 c, g dbSNP:757133445
1607 1607 a, g dbSNP:371132556
1608 1608 a, g dbSNP:750605792
1610 1610 c, t dbSNP:374856505
1611 1611 a, g dbSNP:780234320
1616 1616 c, t dbSNP:747118735
1618 1618 a, c dbSNP:755410149
1624 1624 c, t dbSNP:781747330
1627 1627 a, g dbSNP:748452860
1639 1639 a, c dbSNP:201330472
1642 1642 a, g dbSNP:193922468
1644 1644 c, t dbSNP:745467816
1645 1645 a, g dbSNP:186057842
1652 1652 -, t dbSNP:778598065
1653 1653 c, t dbSNP:774946064
1660 1660 c, t dbSNP:760278026
1663 1663 c, t dbSNP:768461125
1671 1671 c, g dbSNP:776697151
1672 1672 a, c dbSNP:761660235
1678 1678 a, c, g dbSNP:765022455
1679 1679 c, t dbSNP:763229129
1683 1683 c, t dbSNP:766749757
1714 1714 a, g, t dbSNP:11574743
1726 1726 c, t dbSNP:368269334
1776 1776 g, t dbSNP:189021164
1782 1782 a, g dbSNP:758563381
1783 1783 a, t dbSNP:200905283
1793 1793 a, g dbSNP:41280258
1797 1797 c, t dbSNP:372267883
1805 1805 a, t dbSNP:11574744
1817 1817 c, t dbSNP:375531386
1818 1818 a, g dbSNP:568037328
1834 1834 a, c dbSNP:781309225
1843 1843 g, t dbSNP:79556791
1845 1845 c, g dbSNP:77241436
1857 1857 g, t dbSNP:752507527
1866 1866 c, t dbSNP:368812069
1880 1880 c, t dbSNP:41282030
1909 1909 c, t dbSNP:11574745
1915 1915 a, c, t dbSNP:149998598
1919 1919 g, t dbSNP:535253422
1931 1931 a, g, t dbSNP:771184618
1943 1943 a, g dbSNP:56343153
1953 1953 a, g dbSNP:575245692
1964 1964 a, t dbSNP:544107343
1988 1988 c, t dbSNP:557365502
1998 1998 c, t dbSNP:186247245
2003 2003 a, g dbSNP:745994702
2030 2030 g, t dbSNP:11086926
2031 2031 a, g dbSNP:190373692
2065 2065 g, t dbSNP:144306069
2070 2070 a, g dbSNP:528538602
2084 2084 a, g dbSNP:548013860
2159 2159 a, g dbSNP:111466682
2164 2164 c, t dbSNP:530757862
2206 2206 a, g dbSNP:142417840
2210 2210 a, c dbSNP:761017274
2228 2228 a, g dbSNP:182948721
2252 2252 -, c dbSNP:377438371
2269 2269 c, t dbSNP:539420495
2272 2272 a, g dbSNP:558148858
2287 2287 a, g dbSNP:546250091
2295 2295 a, g dbSNP:3212209
2325 2325 c, t dbSNP:186263782
2338 2338 c, t dbSNP:114764820
2372 2372 c, t dbSNP:781146027
2381 2381 a, g dbSNP:190998330
2391 2391 -, cc dbSNP:533628234
2402 2402 c, t dbSNP:537782818
2423 2423 a, g dbSNP:557646293
2436 2436 a, g dbSNP:762455549
2477 2477 a, g dbSNP:146872823
2504 2504 c, t dbSNP:546202459
2544 2544 a, c, t dbSNP:3212210
2545 2545 a, g dbSNP:541914675
2570 2570 -, gaggaagaatggtgtggga dbSNP:766784440
2571 2571 -, gaggaagaatggtgtggga dbSNP:113151070
2575 2575 -, aagaatggtgtgggagagg dbSNP:72137187
2575 2575 a, g dbSNP:199960698
2607 2607 a, g dbSNP:561584948
2615 2615 c, g dbSNP:367907885
2637 2637 c, g dbSNP:768250110
2651 2651 a, g dbSNP:767537996
2658 2658 a, g dbSNP:183246640
2685 2685 a, t dbSNP:114300820
2706 2706 c, t dbSNP:189064084
2707 2707 a, g dbSNP:752736483
2716 2716 a, g dbSNP:573432571
2725 2725 c, g dbSNP:540463510
2725 2725 -, g dbSNP:201949427
2727 2727 -, g dbSNP:749515492
2733 2733 a, g dbSNP:192208246
2744 2744 a, g dbSNP:753675648
2765 2765 c, t dbSNP:757386171
2770 2770 c, t dbSNP:6130615
2781 2781 a, g dbSNP:745916958
2794 2794 a, g dbSNP:140700826
2795 2795 a, c dbSNP:144534776
2888 2888 a, g dbSNP:776986023
2910 2910 c, t dbSNP:772201090
2914 2914 c, t dbSNP:558596485
2931 2931 c, t dbSNP:182919150
2937 2937 -, tcctccct dbSNP:3834658
2937 2937 -, tcctccct dbSNP:397840964
2947 2947 c, t dbSNP:780536345
2991 2991 c, t dbSNP:557247391
3001 3001 c, t dbSNP:769165584
3002 3002 a, g dbSNP:187923731
3006 3006 c, t dbSNP:765577569
3033 3033 c, t dbSNP:568456380
3086 3086 a, c dbSNP:553377991
3110 3110 c, t dbSNP:6103734
3126 3126 c, t dbSNP:572889729
3130 3130 c, t dbSNP:191802763
3198 3198 a, c dbSNP:184324368
3199 3199 c, t dbSNP:762268655
3325 3325 c, t dbSNP:770458305
3353 3353 -, agg dbSNP:768698665
3353 3353 a, g dbSNP:189107638
3411 3411 a, g dbSNP:544409770
3417 3417 -, g dbSNP:549193414
3421 3421 g, t dbSNP:564110189
3458 3458 g, t dbSNP:533285929
3460 3460 a, g dbSNP:368930947
3465 3465 a, g dbSNP:540153780
3466 3466 a, g dbSNP:759101859
3470 3470 a, g dbSNP:4812832
3538 3538 c, t dbSNP:528906469
3575 3575 g, t dbSNP:764268817
3583 3583 c, t dbSNP:548955829
3613 3613 a, g dbSNP:140719706
3634 3634 a, g dbSNP:192144605
3644 3644 c, t dbSNP:150112206
3665 3665 a, g dbSNP:537789084
3695 3695 c, t dbSNP:751533730
3711 3711 c, g dbSNP:752256167
3791 3791 c, t dbSNP:760628227
3801 3801 c, t dbSNP:764110762
3820 3820 a, g dbSNP:138556808
3831 3831 c, t dbSNP:148871044
3869 3869 c, t dbSNP:532748454
3886 3886 c, t dbSNP:553258114
3890 3890 c, g dbSNP:545314214
3894 3894 c, g dbSNP:537829031
3899 3899 a, c dbSNP:535477938
3900 3900 a, g dbSNP:375374469
3971 3971 c, t dbSNP:762096625
3993 3993 c, t dbSNP:555307252
3996 3996 a, t dbSNP:557732423
4000 4000 g, t dbSNP:575366181
4003 4003 g, t dbSNP:537930559
4004 4004 c, g dbSNP:3212211
4012 4012 c, g dbSNP:373068234
4059 4059 c, t dbSNP:765367052
4071 4071 a, g dbSNP:185388702
4118 4118 c, t dbSNP:560466546
4171 4171 a, g dbSNP:76705771
4176 4176 g, t dbSNP:3212212
4193 4193 a, g dbSNP:750712699
4197 4197 a, g dbSNP:758625843
4210 4210 g, t dbSNP:527521356
4211 4211 g, t dbSNP:780051318
4225 4225 a, c dbSNP:3212213
4246 4246 c, t dbSNP:747113436
4282 4282 c, t dbSNP:11698414
4294 4294 a, g dbSNP:146992858
4311 4311 c, t dbSNP:370576653
4316 4316 -, tcttttt dbSNP:770066410
4316 4316 -, tt dbSNP:761222838
4316 4316 c, t dbSNP:3212214
4317 4317 -, t dbSNP:763408425
4335 4335 -, ttttttt dbSNP:568934867
4341 4341 -, t dbSNP:11450239
4341 4341 -, t dbSNP:398035765
4409 4409 a, g dbSNP:562455396
4417 4417 a, c dbSNP:755438203
4424 4424 c, t dbSNP:113417800
4434 4434 -, ac dbSNP:548863430
4449 4449 g, t dbSNP:781742192
4452 4452 a, g dbSNP:748438530
4477 4477 g, t dbSNP:551178163
4530 4530 a, t dbSNP:190730430
4630 4630 c, t dbSNP:770250175
4636 4636 a, g dbSNP:568592149
4638 4638 a, g dbSNP:529373041
4651 4651 a, g dbSNP:773868595
4655 4655 a, c, t dbSNP:377181880
4656 4656 a, g dbSNP:533361991
4690 4690 a, g dbSNP:546761850
4693 4693 a, c dbSNP:745444170
4706 4706 c, t dbSNP:753843962
4724 4724 c, t dbSNP:551080524
4740 4740 g, t dbSNP:775086593
4766 4766 -, tg dbSNP:760095436
4777 4777 -, a dbSNP:141563916
4781 4781 g, t dbSNP:535731605
4786 4786 c, t dbSNP:548993228
4791 4791 a, c dbSNP:569302875
4804 4804 a, g dbSNP:369168365

Target ORF information:

RefSeq Version XM_011528798
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens hepatocyte nuclear factor 4, alpha (HNF4A), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_011528798

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
ATGCAGGACT CTGTTGTTGC CACTCACCAA GTGAGATTCA TATCAGCAAC ATGTCCGTTT 
GTCTCTGAGC AGATTTTGTT GCCGCTGCGT CTCGCCAGAT TGAGGCATCC CCTCCGACAT
CACTGGAGCA TATCTGGAGG GGTGGACAGT TCTCCACAGG GAGACACGTC CCCATCAGAA
GGCACCAACC TCAACGCGCC CAACAGCCTG GGTGTCAGCG CCCTGTGTGC CATCTGCGGG
GACCGGGCCA CGGGCAAACA CTACGGTGCC TCGAGCTGTG ACGGCTGCAA GGGCTTCTTC
CGGAGGAGCG TGCGGAAGAA CCACATGTAC TCCTGCAGAT TTAGCCGGCA GTGCGTGGTG
GACAAAGACA AGAGGAACCA GTGCCGCTAC TGCAGGCTCA AGAAATGCTT CCGGGCTGGC
ATGAAGAAGG AAGCCGTCCA GAATGAGCGG GACCGGATCA GCACTCGAAG GTCAAGCTAT
GAGGACAGCA GCCTGCCCTC CATCAATGCG CTCCTGCAGG CGGAGGTCCT GTCCCGACAG
ATCACCTCCC CCGTCTCCGG GATCAACGGC GACATTCGGG CGAAGAAGAT TGCCAGCATC
GCAGATGTGT GTGAGTCCAT GAAGGAGCAG CTGCTGGTTC TCGTTGAGTG GGCCAAGTAC
ATCCCAGCTT TCTGCGAGCT CCCCCTGGAC GACCAGGTGG CCCTGCTCAG AGCCCATGCT
GGCGAGCACC TGCTGCTCGG AGCCACCAAG AGATCCATGG TGTTCAAGGA CGTGCTGCTC
CTAGGCAATG ACTACATTGT CCCTCGGCAC TGCCCGGAGC TGGCGGAGAT GAGCCGGGTG
TCCATACGCA TCCTTGACGA GCTGGTGCTG CCCTTCCAGG AGCTGCAGAT CGATGACAAT
GAGTATGCCT ACCTCAAAGC CATCATCTTC TTTGACCCAG ATGCCAAGGG GCTGAGCGAT
CCAGGGAAGA TCAAGCGGCT GCGTTCCCAG GTGCAGGTGA GCTTGGAGGA CTACATCAAC
GACCGCCAGT ATGACTCGCG TGGCCGCTTT GGAGAGCTGC TGCTGCTGCT GCCCACCTTG
CAGAGCATCA CCTGGCAGAT GATCGAGCAG ATCCAGTTCA TCAAGCTCTT CGGCATGGCC
AAGATTGACA ACCTGTTGCA GGAGATGCTG CTGGGAGGGT CCCCCAGCGA TGCACCCCAT
GCCCACCACC CCCTGCACCC TCACCTGATG CAGGAACATA TGGGAACCAA CGTCATCGTT
GCCAACACAA TGCCCACTCA CCTCAGCAAC GGACAGATGT GTGAGTGGCC CCGACCCAGG
GGACAGGCAG CCACCCCTGA GACCCCACAG CCCTCACCGC CAGGTGGCTC AGGGTCTGAG
CCCTATAAGC TCCTGCCGGG AGCCGTCGCC ACAATCGTCA AGCCCCTCTC TGCCATCCCC
CAGCCGACCA TCACCAAGCA GGAAGTTATC TAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu52995
Accession Version XM_005260407.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1542bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector Document: User manual_GenEZ ORF Clone Products.pdf (pdf)
Clone information Clone Map
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags Document: MSDS_GenEZ ORF Clone Products.pdf (pdf)
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product hepatocyte nuclear factor 4-alpha isoform X3
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_011362.11) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 12, 2015 this sequence version replaced gi:530418096. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
ATGCGACTCT CCAAAACCCT CGTCGACATG GACATGGCCG ACTACAGTGC TGCACTGGAC 
CCAGCCTACA CCACCCTGGA ATTTGAGAAT GTGCAGGTGT TGACGATGGG CAATGGTAGG
TGGGGGCAGA TGTGCCCAGG TATTTTGTTG CCGCTGCGTC TCGCCAGATT GAGGCATCCC
CTCCGACATC ACTGGAGCAT ATCTGGAGGG GTGGACAGTT CTCCACAGGG AGACACGTCC
CCATCAGAAG GCACCAACCT CAACGCGCCC AACAGCCTGG GTGTCAGCGC CCTGTGTGCC
ATCTGCGGGG ACCGGGCCAC GGGCAAACAC TACGGTGCCT CGAGCTGTGA CGGCTGCAAG
GGCTTCTTCC GGAGGAGCGT GCGGAAGAAC CACATGTACT CCTGCAGATT TAGCCGGCAG
TGCGTGGTGG ACAAAGACAA GAGGAACCAG TGCCGCTACT GCAGGCTCAA GAAATGCTTC
CGGGCTGGCA TGAAGAAGGA AGCCGTCCAG AATGAGCGGG ACCGGATCAG CACTCGAAGG
TCAAGCTATG AGGACAGCAG CCTGCCCTCC ATCAATGCGC TCCTGCAGGC GGAGGTCCTG
TCCCGACAGA TCACCTCCCC CGTCTCCGGG ATCAACGGCG ACATTCGGGC GAAGAAGATT
GCCAGCATCG CAGATGTGTG TGAGTCCATG AAGGAGCAGC TGCTGGTTCT CGTTGAGTGG
GCCAAGTACA TCCCAGCTTT CTGCGAGCTC CCCCTGGACG ACCAGGTGGC CCTGCTCAGA
GCCCATGCTG GCGAGCACCT GCTGCTCGGA GCCACCAAGA GATCCATGGT GTTCAAGGAC
GTGCTGCTCC TAGGCAATGA CTACATTGTC CCTCGGCACT GCCCGGAGCT GGCGGAGATG
AGCCGGGTGT CCATACGCAT CCTTGACGAG CTGGTGCTGC CCTTCCAGGA GCTGCAGATC
GATGACAATG AGTATGCCTA CCTCAAAGCC ATCATCTTCT TTGACCCAGA TGCCAAGGGG
CTGAGCGATC CAGGGAAGAT CAAGCGGCTG CGTTCCCAGG TGCAGGTGAG CTTGGAGGAC
TACATCAACG ACCGCCAGTA TGACTCGCGT GGCCGCTTTG GAGAGCTGCT GCTGCTGCTG
CCCACCTTGC AGAGCATCAC CTGGCAGATG ATCGAGCAGA TCCAGTTCAT CAAGCTCTTC
GGCATGGCCA AGATTGACAA CCTGTTGCAG GAGATGCTGC TGGGAGGGTC CCCCAGCGAT
GCACCCCATG CCCACCACCC CCTGCACCCT CACCTGATGC AGGAACATAT GGGAACCAAC
GTCATCGTTG CCAACACAAT GCCCACTCAC CTCAGCAACG GACAGATGTG TGAGTGGCCC
CGACCCAGGG GACAGGCAGC CACCCCTGAG ACCCCACAGC CCTCACCGCC AGGTGGCTCA
GGGTCTGAGC CCTATAAGCT CCTGCCGGGA GCCGTCGCCA CAATCGTCAA GCCCCTCTCT
GCCATCCCCC AGCCGACCAT CACCAAGCAG GAAGTTATCT AG
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeqXP_005260464.1
CDS89..1630
Misc Feature(1)383..610(+)
Misc Feature(2)383..550(+)
Misc Feature(3)401..604(+)
Misc Feature(4)494..544(+)
Misc Feature(5)656..1324(+)
Misc Feature(6)755..1279(+)
Misc Feature(7)800..1324(+)
Misc Feature(8)1016..1252(+)
Translation
Position Chain Variation Link
7 7 a, g dbSNP:546643401
14 14 -, ggagggc dbSNP:555295035
21 21 a, g dbSNP:566155738
28 28 a, g dbSNP:75356504
38 38 a, g dbSNP:548649568
39 39 g, t dbSNP:772836091
40 40 c, g dbSNP:748958106
41 41 a, g dbSNP:770620294
45 45 a, g dbSNP:773686626
46 46 c, t dbSNP:759117225
47 47 a, g dbSNP:767533595
54 54 g, t dbSNP:775618492
68 68 c, t dbSNP:371913805
69 69 a, g dbSNP:755924647
70 70 c, t dbSNP:201377684
71 71 a, c, g dbSNP:1063240
73 73 c, t dbSNP:765514916
74 74 a, g dbSNP:568730599
82 82 a, g dbSNP:758542858
86 86 a, g dbSNP:780513636
89 89 a, c dbSNP:747571524
92 92 c, t dbSNP:755329974
93 93 a, g dbSNP:781467980
97 97 a, c, t dbSNP:748558393
109 109 c, t dbSNP:774093087
110 110 a, g dbSNP:537703038
112 112 c, t dbSNP:771767442
116 116 a, g, t dbSNP:775567227
119 119 a, g dbSNP:200655531
127 127 c, g dbSNP:373591956
128 128 a, g dbSNP:761696474
134 134 a, g dbSNP:765342557
140 140 a, g dbSNP:750703108
153 153 a, c dbSNP:758457314
154 154 c, t dbSNP:766511087
157 157 c, t dbSNP:377103999
158 158 a, t dbSNP:369693799
168 168 a, c dbSNP:781738246
180 180 c, t dbSNP:752973948
192 192 c, t dbSNP:756553207
193 193 a, g dbSNP:778418332
196 196 a, g, t dbSNP:745604501
199 199 c, t dbSNP:779657238
200 200 a, g dbSNP:746544497
201 201 a, c dbSNP:768670371
211 211 a, g dbSNP:369478495
217 217 -, gatgtg dbSNP:760033218
220 220 a, g dbSNP:761488506
224 224 -, ccag dbSNP:753184398
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467 467 a, g dbSNP:369182343
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562 562 a, g dbSNP:766365045
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620 620 a, g dbSNP:779271027
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1911 1911 g, t dbSNP:535253422
1923 1923 a, g, t dbSNP:771184618
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1945 1945 a, g dbSNP:575245692
1956 1956 a, t dbSNP:544107343
1980 1980 c, t dbSNP:557365502
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4308