Email to GenScript

Human  Mouse  Rat  Other  

Search Help

Human  Mouse  Rat  Other  

  • THAT   AND
  • THAT   AND


LAMP1 lysosomal-associated membrane protein 1 [Homo sapiens (human)]

Gene Symbol LAMP1
Entrez Gene ID 3916
Full Name lysosomal-associated membrane protein 1
Synonyms CD107a, LAMPA, LGP120
General protein information
Preferred Names
lysosome-associated membrane glycoprotein 1
Names
lysosome-associated membrane glycoprotein 1
LAMP-1
CD107 antigen-like family member A
lysosome-associated membrane protein 1
Gene Type protein-coding
Organism Homo sapiens (human)
Genome

13

13q34

Summary The protein encoded by this gene is a member of a family of membrane glycoproteins. This glycoprotein provides selectins with carbohydrate ligands. It may also play a role in tumor cell metastasis. [provided by RefSeq, Jul 2008]. lac of sum
Disorder MIM:

153330

Disorder Html:
CloneID RefSeq Accession Definition **Vector *Turnaround time Price
OHu58688 XM_011537494 PREDICTED: Homo sapiens lysosomal-associated membrane protein 1 (LAMP1), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK Not in stock 7-9 Starting from $99.00
OHu58689 XM_011537495 PREDICTED: Homo sapiens lysosomal-associated membrane protein 1 (LAMP1), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK Not in stock 7-9 Starting from $99.00
OHu09610 NM_005561 Homo sapiens lysosomal-associated membrane protein 1 (LAMP1), mRNA. pcDNA3.1-C-(k)DYK In stock 5-7 Starting from $99.00

*Business Day
**You may select a custom vector to replace pcDNA3.1-C-(k)DYK after clone is added to cart.



CloneID OHu58688D
Sequence Information ORF Nucleotide Sequence (Length: 1197bp)
Protein sequence
SNP
Vector pcDNA3.1-C-(k)DYK or customized vector
Clone information Clone Map
Tag on pcDNA3.1-C-(k)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product lysosome-associated membrane glycoprotein 1 isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_027140.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
ATGGGCCTCA TGCATTGTGC GTCAGCAGCA ATGTTTATGG TGAAAAATGG CAACGGGACC 
GCGTGCATAA TGGCCAACTT CTCTGCTGCC TTCTCAGTGA ACTACGACAC CAAGAGTGGC
CCTAAGAACA TGACCTTTGA CCTGCCATCA GATGCCACAG TGGTGCTCAA CCGCAGCTCC
TGTGGAAAAG AGAACACTTC TGACCCCAGT CTCGTGATTG CTTTTGGAAG AGGACATACA
CTCACTCTCA ATTTCACGAG AAATGCAACA CGTTACAGCG TCCAGCTCAT GAGTTTTGTT
TATAACTTGT CAGACACACA CCTTTTCCCC AATGCGAGCT CCAAAGAAAT CAAGACTGTG
GAATCTATAA CTGACATCAG GGCAGATATA GATAAAAAAT ACAGATGTGT TAGTGGCACC
CAGGTCCACA TGAACAACGT GACCGTAACG CTCCATGATG CCACCATCCA GGCGTACCTT
TCCAACAGCA GCTTCAGCCG GGGAGAGACA CGCTGTGAAC AAGACAGGCC TTCCCCAACC
ACAGCGCCCC CTGCGCCACC CAGCCCCTCG CCCTCACCCG TGCCCAAGAG CCCCTCTGTG
GACAAGTACA ACGTGAGCGG CACCAACGGG ACCTGCCTGC TGGCCAGCAT GGGGCTGCAG
CTGAACCTCA CCTATGAGAG GAAGGACAAC ACGACGGTGA CAAGGCTTCT CAACATCAAC
CCCAACAAGA CCTCGGCCAG CGGGAGCTGC GGCGCCCACC TGGTGACTCT GGAGCTGCAC
AGCGAGGGCA CCACCGTCCT GCTCTTCCAG TTCGGGATGA ATGCAAGTTC TAGCCGGTTT
TTCCTACAAG GAATCCAGTT GAATACAATT CTTCCTGACG CCAGAGACCC TGCCTTTAAA
GCTGCCAACG GCTCCCTGCG AGCGCTGCAG GCCACAGTCG GCAATTCCTA CAAGTGCAAC
GCGGAGGAGC ACGTCCGTGT CACGAAGGCG TTTTCAGTCA ATATATTCAA AGTGTGGGTC
CAGGCTTTCA AGGTGGAAGG TGGCCAGTTT GGCTCTGTGG AGGAGTGTCT GCTGGACGAG
AACAGCATGC TGATCCCCAT CGCTGTGGGT GGTGCCCTGG CGGGGCTGGT CCTCATCGTC
CTCATCGCCT ACCTCGTCGG CAGGAAGAGG AGTCACGCAG GCTACCAGAC TATCTAG
The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.
RefSeqXP_011535796.1
CDS16..1212
Misc Feature(1)289..1209(+)
Misc Feature(2)1099..1191(+)
Misc Feature(3)1102..1149(+)
Translation
Position Chain Variation Link
2 2 a, g dbSNP:559933880
20 20 a, g dbSNP:776655908
24 24 c, g dbSNP:375926415
26 26 c, t dbSNP:180717643
32 32 a, g dbSNP:200783496
33 33 g, t dbSNP:370111946
35 35 c, t dbSNP:199700645
36 36 a, g dbSNP:766554441
39 39 a, g dbSNP:751917334
45 45 a, g dbSNP:560950701
46 46 a, g dbSNP:564189253
50 50 g, t dbSNP:781372178
52 52 a, g dbSNP:748693352
57 57 a, g dbSNP:756632821
65 65 a, g dbSNP:74628343
69 69 c, g, t dbSNP:184787579
70 70 c, g dbSNP:775189716
75 75 c, t dbSNP:372572919
76 76 a, g dbSNP:768499433
77 77 c, t dbSNP:776227318
78 78 g, t dbSNP:375160189
81 81 c, t dbSNP:765152092
86 86 c, t dbSNP:773319736
89 89 c, t dbSNP:762996222
90 90 a, c, t dbSNP:766396501
94 94 c, t dbSNP:755089559
98 98 -, ctg dbSNP:757490846
100 100 g, t dbSNP:767939299
104 104 c, t dbSNP:752992439
116 116 a, c dbSNP:756753251
119 119 a, g dbSNP:778396638
120 120 c, t dbSNP:745423607
121 121 a, g dbSNP:201650159
149 149 c, t dbSNP:369224631
152 152 c, t dbSNP:751025906
159 159 a, g dbSNP:754696863
165 165 a, t dbSNP:77735431
167 167 a, g dbSNP:200032545
175 175 a, g dbSNP:769607827
182 182 c, t dbSNP:777478201
183 183 c, g, t dbSNP:369272384
185 185 a, t dbSNP:774558141
187 187 c, t dbSNP:61750829
188 188 a, g dbSNP:61750830
189 189 c, g dbSNP:775880078
192 192 c, t dbSNP:760942957
197 197 a, g dbSNP:764562689
205 205 a, g dbSNP:754236794
209 209 a, c dbSNP:762446154
210 210 c, t dbSNP:765628095
217 217 a, g dbSNP:751126775
229 229 a, g dbSNP:754467186
232 232 a, g dbSNP:780640418
252 252 c, t dbSNP:530562458
254 254 c, g dbSNP:755705842
262 262 c, g dbSNP:777603253
264 264 c, t dbSNP:749079016
265 265 a, g dbSNP:757261971
272 272 c, t dbSNP:377651869
273 273 a, g dbSNP:745772477
275 275 a, g dbSNP:549097040
280 280 g, t dbSNP:780652365
286 286 c, t dbSNP:370862051
287 287 a, g, t dbSNP:142333942
288 288 g, t dbSNP:768991422
294 294 c, t dbSNP:528276083
295 295 a, g dbSNP:374537669
299 299 a, t dbSNP:765586426
316 316 g, t dbSNP:376324908
317 317 a, g dbSNP:547401171
326 326 c, t dbSNP:773621462
332 332 a, c dbSNP:113219412
334 334 c, t dbSNP:767028185
337 337 c, g dbSNP:111455645
342 342 c, t dbSNP:755832333
347 347 a, g dbSNP:763705634
349 349 a, g dbSNP:753718205
350 350 c, t dbSNP:757027565
351 351 a, g dbSNP:778731588
354 354 a, c dbSNP:745800693
365 365 g, t dbSNP:761465679
369 369 c, g dbSNP:368162623
371 371 c, t dbSNP:750224091
372 372 -, tg dbSNP:773968025
392 392 c, t dbSNP:758445807
401 401 a, t dbSNP:780113794
403 403 a, g dbSNP:751491315
404 404 c, t dbSNP:755377731
438 438 a, g dbSNP:55898120
445 445 a, g dbSNP:373899040
447 447 g, t dbSNP:534819001
449 449 a, g dbSNP:375227374
453 453 c, t dbSNP:778066534
459 459 c, t dbSNP:371847599
460 460 a, g dbSNP:191812061
464 464 c, t dbSNP:774863907
465 465 a, c, g dbSNP:369180138
469 469 c, t dbSNP:776152874
470 470 a, c, g dbSNP:558852088
482 482 g, t dbSNP:764909087
483 483 c, g dbSNP:750230850
485 485 a, c, g dbSNP:372906564
486 486 a, g dbSNP:751544849
487 487 a, g dbSNP:754904750
488 488 c, t dbSNP:777432410
489 489 a, g dbSNP:752817199
491 491 a, g dbSNP:756331260
497 497 a, c dbSNP:778034561
504 504 c, g dbSNP:749464893
512 512 -, gcc dbSNP:199777509
514 514 a, c dbSNP:9577503
522 522 c, g dbSNP:779295072
523 523 a, t dbSNP:112228471
526 526 c, t dbSNP:371918328
527 527 a, g dbSNP:780627739
529 529 c, t dbSNP:747410684
530 530 a, g dbSNP:769380370
535 535 c, g dbSNP:559462906
536 536 a, g dbSNP:748999243
540 540 a, c dbSNP:770677734
551 551 c, g dbSNP:774354712
560 560 c, t dbSNP:759391093
561 561 a, g dbSNP:374933256
569 569 c, t dbSNP:9577229
570 570 a, g dbSNP:545159189
571 571 c, t dbSNP:764254468
581 581 c, t dbSNP:753888731
584 584 c, t dbSNP:200052831
585 585 a, g dbSNP:530779384
586 586 c, t dbSNP:750590451
588 588 c, t dbSNP:758798632
594 594 c, t dbSNP:376761620
595 595 a, g dbSNP:747575303
597 597 a, g dbSNP:755418751
598 598 c, t dbSNP:777467422
602 602 a, g dbSNP:748803182
603 603 a, g dbSNP:56313942
615 615 a, g dbSNP:770764042
620 620 a, g dbSNP:774159757
626 626 a, g dbSNP:745443481
627 627 c, t dbSNP:544828159
630 630 a, g dbSNP:775096058
633 633 c, g, t dbSNP:760712195
634 634 a, g dbSNP:776754723
635 635 a, g dbSNP:761898603
638 638 c, g dbSNP:548996606
642 642 c, t dbSNP:750678018
648 648 c, g dbSNP:763038744
686 686 c, t dbSNP:369669372
695 695 a, g dbSNP:567560779
705 705 a, c dbSNP:755576074
706 706 a, g dbSNP:781761301
709 709 a, c dbSNP:758133363
710 710 c, t dbSNP:370286796
712 712 a, g dbSNP:567894310
719 719 a, g dbSNP:768474200
730 730 a, g dbSNP:780920291
732 732 c, t dbSNP:748135694
736 736 c, t dbSNP:769689911
738 738 c, t dbSNP:773409402
741 741 c, g, t dbSNP:749315723
746 746 a, c, t dbSNP:774188089
749 749 c, t dbSNP:759790645
750 750 a, g dbSNP:768014512
756 756 c, t dbSNP:535315140
765 765 c, t dbSNP:761301142
766 766 a, g dbSNP:764500535
767 767 a, g dbSNP:750003380
768 768 c, t dbSNP:373542595
769 769 a, g dbSNP:765876942
773 773 a, g dbSNP:751196509
782 782 c, t dbSNP:754605658
797 797 c, g dbSNP:781006446
798 798 c, t dbSNP:747935241
799 799 a, g dbSNP:756102656
800 800 a, g dbSNP:761588000
804 804 c, t dbSNP:777585404
806 806 c, t dbSNP:749182188
810 810 c, t dbSNP:139701558
811 811 a, g dbSNP:774438040
814 814 -, ctg dbSNP:775776268
814 814 c, t dbSNP:746141077
819 819 c, t dbSNP:772389719
828 828 c, t dbSNP:776061850
829 829 a, c, g dbSNP:538647194
836 836 a, g dbSNP:375412629
841 841 a, c dbSNP:753635721
850 850 c, t dbSNP:757205414
851 851 a, g dbSNP:201021547
863 863 a, g dbSNP:371542422
865 865 a, g dbSNP:758552201
870 870 c, t dbSNP:41286618
872 872 a, g dbSNP:369159731
884 884 c, t dbSNP:9577230
894 894 c, t dbSNP:184805902
903 903 a, c, t dbSNP:200239310
909 909 c, t dbSNP:773115282
917 917 c, g dbSNP:41286620
921 921 a, c dbSNP:766409505
924 924 c, t dbSNP:2270393
925 925 a, g dbSNP:371034089
935 935 a, g dbSNP:767455348
938 938 c, t dbSNP:374678550
939 939 a, g dbSNP:200140748
945 945 a, g dbSNP:151133886
954 954 c, g, t dbSNP:374840461
962 962 c, g dbSNP:779485504
963 963 c, g dbSNP:746290302
968 968 a, g dbSNP:768240089
975 975 c, t dbSNP:201877351
976 976 a, g dbSNP:747877257
977 977 c, t dbSNP:769570200
978 978 a, g dbSNP:372087869
983 983 a, t dbSNP:762855305
987 987 c, t dbSNP:766211164
988 988 a, g dbSNP:558315912
990 990 a, c dbSNP:759344932
991 991 c, t dbSNP:767683537
992 992 a, g dbSNP:752685874
993 993 c, t dbSNP:116326724
999 999 a, g dbSNP:376013627
1003 1003 c, g dbSNP:753998031
1004 1004 c, t dbSNP:757618803
1005 1005 a, g dbSNP:368427348
1020 1020 a, g dbSNP:750958739
1023 1023 c, t dbSNP:372370740
1061 1061 a, g dbSNP:780823952
1087 1087 c, t dbSNP:760561796
1092 1092 c, t dbSNP:372917889
1093 1093 a, g dbSNP:377137046
1097 1097 a, g dbSNP:762166003
1098 1098 c, g dbSNP:765367131
1102 1102 a, g dbSNP:750605346
1107 1107 c, g dbSNP:763236095
1116 1116 c, t dbSNP:766726971
1119 1119 g, t dbSNP:752135257
1136 1136 c, t dbSNP:755522116
1137 1137 a, g dbSNP:763738666
1143 1143 -, gtcctcatc dbSNP:752470637
1144 1144 -, gtcctcatc dbSNP:756072872
1150 1150 a, g dbSNP:370899258
1152 1152 c, t dbSNP:374673267
1153 1153 a, g dbSNP:756990012
1155 1155 c, g dbSNP:778442876
1161 1161 c, t dbSNP:377066074
1162 1162 a, g dbSNP:758155412
1164 1164 c, t dbSNP:779771298
1170 1170 c, t dbSNP:563165417
1172 1172 c, t dbSNP:768578956
1173 1173 c, g dbSNP:776752641
1174 1174 a, g dbSNP:748195263
1179 1179 c, g, t dbSNP:371265207
1185 1185 c, g dbSNP:375930278
1191 1191 c, t dbSNP:367740277
1194 1194 a, t dbSNP:370190466
1197 1197 c, t dbSNP:760186534
1205 1205 c, g dbSNP:768122957
1207 1207 a, g dbSNP:753197971
1209 1209 c, g, t dbSNP:756724237
1212 1212 a, g dbSNP:750061748
1220 1220 a, c dbSNP:758043762
1222 1222 c, g, t dbSNP:779861274
1223 1223 a, g dbSNP:374070870
1225 1225 a, g dbSNP:367958563
1229 1229 a, c dbSNP:548499764
1231 1231 a, g dbSNP:769786955
1234 1234 a, g dbSNP:773319529
1235 1235 c, g dbSNP:749514943
1244 1244 a, g dbSNP:771275054
1245 1245 c, t dbSNP:774912689
1252 1252 c, t dbSNP:759990494
1253 1253 a, c dbSNP:767926770
1260 1260 c, t dbSNP:775891878
1262 1262 a, g dbSNP:559714284
1263 1263 g, t dbSNP:764698401
1274 1274 a, c dbSNP:138594896
1279 1279 a, g dbSNP:551815240
1296 1296 c, t dbSNP:551252413
1305 1305 -, c dbSNP:563042226
1315 1315 a, g dbSNP:184906622
1343 1343 c, t dbSNP:538015427
1348 1348 c, g dbSNP:189770497
1377 1377 c, t dbSNP:568279121
1463 1463 a, g dbSNP:535722985
1483 1483 -, g dbSNP:575035831
1508 1508 -, g dbSNP:533224363
1526 1526 c, g dbSNP:9577506
1527 1527 c, t dbSNP:185994999
1533 1533 -, g dbSNP:549449419
1541 1541 g, t dbSNP:112130650
1577 1577 c, t dbSNP:9577507
1578 1578 c, t dbSNP:9577508
1585 1585 -, g dbSNP:551904130
1590 1590 g, t dbSNP:577284312
1603 1603 c, g, t dbSNP:549254879
1609 1609 c, g dbSNP:574739452
1612 1612 a, g dbSNP:542108523
1626 1626 a, g dbSNP:370192792
1674 1674 c, t dbSNP:1803895
1675 1675 a, g dbSNP:560424821
1698 1698 g, t dbSNP:527248541
1780 1780 a, g dbSNP:551907417
1786 1786 c, t dbSNP:564172589
1787 1787 a, g dbSNP:186117631
1854 1854 a, c dbSNP:8001808
1941 1941 a, g dbSNP:766841804
1946 1946 c, t dbSNP:11541825
1947 1947 a, g dbSNP:202113105
1966 1966 c, t dbSNP:111453566
1972 1972 c, t dbSNP:372926640
1990 1990 c, t dbSNP:754290171
2010 2010 a, t dbSNP:535684469
2035 2035 a, t dbSNP:547671563
2036 2036 -, t, tt dbSNP:141255835
2036 2036 a, t dbSNP:9603825
2042 2042 a, t dbSNP:3945894
2045 2045 -, t dbSNP:3833987
2074 2074 a, g dbSNP:558666741
2076 2076 g, t dbSNP:778339998
2090 2090 a, t dbSNP:570855038
2092 2092 c, t dbSNP:1057122
2096 2096 a, g dbSNP:191066173
2098 2098 c, t dbSNP:556658397
2104 2104 c, t dbSNP:15203
2118 2118 g, t dbSNP:3197762
2120 2120 c, t dbSNP:148293839
2121 2121 a, g dbSNP:567211353
2127 2127 a, c dbSNP:1803896
2130 2130 a, g dbSNP:554014622
2151 2151 a, g dbSNP:182357515
2173 2173 a, g dbSNP:546510380
2219 2219 g, t dbSNP:3752960

Target ORF information:

RefSeq Version XM_011537494
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens lysosomal-associated membrane protein 1 (LAMP1), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1-C-(k)DYK
XM_011537494

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
ATGGGCCTCA TGCATTGTGC GTCAGCAGCA ATGTTTATGG TGAAAAATGG CAACGGGACC 
GCGTGCATAA TGGCCAACTT CTCTGCTGCC TTCTCAGTGA ACTACGACAC CAAGAGTGGC
CCTAAGAACA TGACCTTTGA CCTGCCATCA GATGCCACAG TGGTGCTCAA CCGCAGCTCC
TGTGGAAAAG AGAACACTTC TGACCCCAGT CTCGTGATTG CTTTTGGAAG AGGACATACA
CTCACTCTCA ATTTCACGAG AAATGCAACA CGTTACAGCG TCCAGCTCAT GAGTTTTGTT
TATAACTTGT CAGACACACA CCTTTTCCCC AATGCGAGCT CCAAAGAAAT CAAGACTGTG
GAATCTATAA CTGACATCAG GGCAGATATA GATAAAAAAT ACAGATGTGT TAGTGGCACC
CAGGTCCACA TGAACAACGT GACCGTAACG CTCCATGATG CCACCATCCA GGCGTACCTT
TCCAACAGCA GCTTCAGCCG GGGAGAGACA CGCTGTGAAC AAGACAGGCC TTCCCCAACC
ACAGCGCCCC CTGCGCCACC CAGCCCCTCG CCCTCACCCG TGCCCAAGAG CCCCTCTGTG
GACAAGTACA ACGTGAGCGG CACCAACGGG ACCTGCCTGC TGGCCAGCAT GGGGCTGCAG
CTGAACCTCA CCTATGAGAG GAAGGACAAC ACGACGGTGA CAAGGCTTCT CAACATCAAC
CCCAACAAGA CCTCGGCCAG CGGGAGCTGC GGCGCCCACC TGGTGACTCT GGAGCTGCAC
AGCGAGGGCA CCACCGTCCT GCTCTTCCAG TTCGGGATGA ATGCAAGTTC TAGCCGGTTT
TTCCTACAAG GAATCCAGTT GAATACAATT CTTCCTGACG CCAGAGACCC TGCCTTTAAA
GCTGCCAACG GCTCCCTGCG AGCGCTGCAG GCCACAGTCG GCAATTCCTA CAAGTGCAAC
GCGGAGGAGC ACGTCCGTGT CACGAAGGCG TTTTCAGTCA ATATATTCAA AGTGTGGGTC
CAGGCTTTCA AGGTGGAAGG TGGCCAGTTT GGCTCTGTGG AGGAGTGTCT GCTGGACGAG
AACAGCATGC TGATCCCCAT CGCTGTGGGT GGTGCCCTGG CGGGGCTGGT CCTCATCGTC
CTCATCGCCT ACCTCGTCGG CAGGAAGAGG AGTCACGCAG GCTACCAGAC TATCTAG

The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.


CloneID OHu58689D
Sequence Information ORF Nucleotide Sequence (Length: 1095bp)
Protein sequence
SNP
Vector pcDNA3.1-C-(k)DYK or customized vector
Clone information Clone Map
Tag on pcDNA3.1-C-(k)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product lysosome-associated membrane glycoprotein 1 isoform X2
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_027140.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
ATGGCGGCCC CCGGCAGCGC CCGGCGACCC CTGCTGCTGC TACTGCTGTT GCTGCTGCTC 
GGCCTCATGC ATTGTGCGTC AGCAGCAATG TTTATGGTGA AAAATGGCAA CGGGACCGCG
TGCATAATGG CCAACTTCTC TGCTGCCTTC TCAGTGAACT ACGACACCAA GAGTGGCCCT
AAGAACATGA CCTTTGACCT GCCATCAGAT GCCACAGTGG TGCTCAACCG CAGCTCCTGT
GGAAAAGAGA ACACTTCTGA CCCCAGTCTC GTGATTGCTT TTGGAAGAGG ACATACACTC
ACTCTCAATT TCACGAGAAA TGCAACACGT TACAGCGTCC AGCTCATGAG TTTTGTTTAT
AACTTGTCAG ACACACACCT TTTCCCCAAT GCGAGCTCCA AAGAGACACG CTGTGAACAA
GACAGGCCTT CCCCAACCAC AGCGCCCCCT GCGCCACCCA GCCCCTCGCC CTCACCCGTG
CCCAAGAGCC CCTCTGTGGA CAAGTACAAC GTGAGCGGCA CCAACGGGAC CTGCCTGCTG
GCCAGCATGG GGCTGCAGCT GAACCTCACC TATGAGAGGA AGGACAACAC GACGGTGACA
AGGCTTCTCA ACATCAACCC CAACAAGACC TCGGCCAGCG GGAGCTGCGG CGCCCACCTG
GTGACTCTGG AGCTGCACAG CGAGGGCACC ACCGTCCTGC TCTTCCAGTT CGGGATGAAT
GCAAGTTCTA GCCGGTTTTT CCTACAAGGA ATCCAGTTGA ATACAATTCT TCCTGACGCC
AGAGACCCTG CCTTTAAAGC TGCCAACGGC TCCCTGCGAG CGCTGCAGGC CACAGTCGGC
AATTCCTACA AGTGCAACGC GGAGGAGCAC GTCCGTGTCA CGAAGGCGTT TTCAGTCAAT
ATATTCAAAG TGTGGGTCCA GGCTTTCAAG GTGGAAGGTG GCCAGTTTGG CTCTGTGGAG
GAGTGTCTGC TGGACGAGAA CAGCATGCTG ATCCCCATCG CTGTGGGTGG TGCCCTGGCG
GGGCTGGTCC TCATCGTCCT CATCGCCTAC CTCGTCGGCA GGAAGAGGAG TCACGCAGGC
TACCAGACTA TCTAG
The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.
RefSeqXP_011535797.1
CDS315..1409
Misc Feature(1)645..1406(+)
Misc Feature(2)1296..1388(+)
Misc Feature(3)1299..1346(+)
Translation
Position Chain Variation Link
3 3 g, t dbSNP:575419670
63 63 c, g dbSNP:113228666
140 140 g, t dbSNP:536548948
148 148 g, t dbSNP:762261320
150 150 c, t dbSNP:769446555
158 158 c, t dbSNP:555433438
164 164 a, c dbSNP:775529395
173 173 c, t dbSNP:186336451
217 217 c, t dbSNP:570438289
263 263 a, c dbSNP:188339460
277 277 a, g dbSNP:764090399
282 282 a, c dbSNP:753909918
284 284 c, t dbSNP:553031096
285 285 c, t dbSNP:757341892
287 287 c, t dbSNP:7983578
294 294 c, g, t dbSNP:144852732
310 310 g, t dbSNP:563930959
359 359 a, g dbSNP:531065511
376 376 a, g dbSNP:776655908
380 380 c, g dbSNP:375926415
382 382 c, t dbSNP:180717643
388 388 a, g dbSNP:200783496
389 389 g, t dbSNP:370111946
391 391 c, t dbSNP:199700645
392 392 a, g dbSNP:766554441
395 395 a, g dbSNP:751917334
401 401 a, g dbSNP:560950701
402 402 a, g dbSNP:564189253
406 406 g, t dbSNP:781372178
408 408 a, g dbSNP:748693352
413 413 a, g dbSNP:756632821
421 421 a, g dbSNP:74628343
425 425 c, g, t dbSNP:184787579
426 426 c, g dbSNP:775189716
431 431 c, t dbSNP:372572919
432 432 a, g dbSNP:768499433
433 433 c, t dbSNP:776227318
434 434 g, t dbSNP:375160189
437 437 c, t dbSNP:765152092
442 442 c, t dbSNP:773319736
445 445 c, t dbSNP:762996222
446 446 a, c, t dbSNP:766396501
450 450 c, t dbSNP:755089559
454 454 -, ctg dbSNP:757490846
456 456 g, t dbSNP:767939299
460 460 c, t dbSNP:752992439
472 472 a, c dbSNP:756753251
475 475 a, g dbSNP:778396638
476 476 c, t dbSNP:745423607
477 477 a, g dbSNP:201650159
505 505 c, t dbSNP:369224631
508 508 c, t dbSNP:751025906
515 515 a, g dbSNP:754696863
521 521 a, t dbSNP:77735431
523 523 a, g dbSNP:200032545
531 531 a, g dbSNP:769607827
538 538 c, t dbSNP:777478201
539 539 c, g, t dbSNP:369272384
541 541 a, t dbSNP:774558141
543 543 c, t dbSNP:61750829
544 544 a, g dbSNP:61750830
545 545 c, g dbSNP:775880078
548 548 c, t dbSNP:760942957
553 553 a, g dbSNP:764562689
561 561 a, g dbSNP:754236794
565 565 a, c dbSNP:762446154
566 566 c, t dbSNP:765628095
573 573 a, g dbSNP:751126775
585 585 a, g dbSNP:754467186
588 588 a, g dbSNP:780640418
608 608 c, t dbSNP:530562458
610 610 c, g dbSNP:755705842
618 618 c, g dbSNP:777603253
620 620 c, t dbSNP:749079016
621 621 a, g dbSNP:757261971
628 628 c, t dbSNP:377651869
629 629 a, g dbSNP:745772477
631 631 a, g dbSNP:549097040
636 636 g, t dbSNP:780652365
642 642 c, t dbSNP:370862051
643 643 a, g, t dbSNP:142333942
644 644 g, t dbSNP:768991422
650 650 c, t dbSNP:528276083
651 651 a, g dbSNP:374537669
655 655 a, t dbSNP:765586426
672 672 g, t dbSNP:376324908
673 673 a, g dbSNP:547401171
682 682 c, t dbSNP:773621462
688 688 a, c dbSNP:113219412
690 690 c, t dbSNP:767028185
693 693 c, g dbSNP:111455645
698 698 c, t dbSNP:755832333
703 703 a, g dbSNP:763705634
705 705 a, g dbSNP:753718205
706 706 c, t dbSNP:757027565
707 707 a, g dbSNP:778731588
710 710 a, c dbSNP:745800693
719 719 c, g dbSNP:779295072
720 720 a, t dbSNP:112228471
723 723 c, t dbSNP:371918328
724 724 a, g dbSNP:780627739
726 726 c, t dbSNP:747410684
727 727 a, g dbSNP:769380370
732 732 c, g dbSNP:559462906
733 733 a, g dbSNP:748999243
737 737 a, c dbSNP:770677734
748 748 c, g dbSNP:774354712
757 757 c, t dbSNP:759391093
758 758 a, g dbSNP:374933256
766 766 c, t dbSNP:9577229
767 767 a, g dbSNP:545159189
768 768 c, t dbSNP:764254468
778 778 c, t dbSNP:753888731
781 781 c, t dbSNP:200052831
782 782 a, g dbSNP:530779384
783 783 c, t dbSNP:750590451
785 785 c, t dbSNP:758798632
791 791 c, t dbSNP:376761620
792 792 a, g dbSNP:747575303
794 794 a, g dbSNP:755418751
795 795 c, t dbSNP:777467422
799 799 a, g dbSNP:748803182
800 800 a, g dbSNP:56313942
812 812 a, g dbSNP:770764042
817 817 a, g dbSNP:774159757
823 823 a, g dbSNP:745443481
824 824 c, t dbSNP:544828159
827 827 a, g dbSNP:775096058
830 830 c, g, t dbSNP:760712195
831 831 a, g dbSNP:776754723
832 832 a, g dbSNP:761898603
835 835 c, g dbSNP:548996606
839 839 c, t dbSNP:750678018
845 845 c, g dbSNP:763038744
883 883 c, t dbSNP:369669372
892 892 a, g dbSNP:567560779
902 902 a, c dbSNP:755576074
903 903 a, g dbSNP:781761301
906 906 a, c dbSNP:758133363
907 907 c, t dbSNP:370286796
909 909 a, g dbSNP:567894310
916 916 a, g dbSNP:768474200
927 927 a, g dbSNP:780920291
929 929 c, t dbSNP:748135694
933 933 c, t dbSNP:769689911
935 935 c, t dbSNP:773409402
938 938 c, g, t dbSNP:749315723
943 943 a, c, t dbSNP:774188089
946 946 c, t dbSNP:759790645
947 947 a, g dbSNP:768014512
953 953 c, t dbSNP:535315140
962 962 c, t dbSNP:761301142
963 963 a, g dbSNP:764500535
964 964 a, g dbSNP:750003380
965 965 c, t dbSNP:373542595
966 966 a, g dbSNP:765876942
970 970 a, g dbSNP:751196509
979 979 c, t dbSNP:754605658
994 994 c, g dbSNP:781006446
995 995 c, t dbSNP:747935241
996 996 a, g dbSNP:756102656
997 997 a, g dbSNP:761588000
1001 1001 c, t dbSNP:777585404
1003 1003 c, t dbSNP:749182188
1007 1007 c, t dbSNP:139701558
1008 1008 a, g dbSNP:774438040
1011 1011 -, ctg dbSNP:775776268
1011 1011 c, t dbSNP:746141077
1016 1016 c, t dbSNP:772389719
1025 1025 c, t dbSNP:776061850
1026 1026 a, c, g dbSNP:538647194
1033 1033 a, g dbSNP:375412629
1038 1038 a, c dbSNP:753635721
1047 1047 c, t dbSNP:757205414
1048 1048 a, g dbSNP:201021547
1060 1060 a, g dbSNP:371542422
1062 1062 a, g dbSNP:758552201
1067 1067 c, t dbSNP:41286618
1069 1069 a, g dbSNP:369159731
1081 1081 c, t dbSNP:9577230
1091 1091 c, t dbSNP:184805902
1100 1100 a, c, t dbSNP:200239310
1106 1106 c, t dbSNP:773115282
1114 1114 c, g dbSNP:41286620
1118 1118 a, c dbSNP:766409505
1121 1121 c, t dbSNP:2270393
1122 1122 a, g dbSNP:371034089
1132 1132 a, g dbSNP:767455348
1135 1135 c, t dbSNP:374678550
1136 1136 a, g dbSNP:200140748
1142 1142 a, g dbSNP:151133886
1151 1151 c, g, t dbSNP:374840461
1159 1159 c, g dbSNP:779485504
1160 1160 c, g dbSNP:746290302
1165 1165 a, g dbSNP:768240089
1172 1172 c, t dbSNP:201877351
1173 1173 a, g dbSNP:747877257
1174 1174 c, t dbSNP:769570200
1175 1175 a, g dbSNP:372087869
1180 1180 a, t dbSNP:762855305
1184 1184 c, t dbSNP:766211164
1185 1185 a, g dbSNP:558315912
1187 1187 a, c dbSNP:759344932
1188 1188 c, t dbSNP:767683537
1189 1189 a, g dbSNP:752685874
1190 1190 c, t dbSNP:116326724
1196 1196 a, g dbSNP:376013627
1200 1200 c, g dbSNP:753998031
1201 1201 c, t dbSNP:757618803
1202 1202 a, g dbSNP:368427348
1217 1217 a, g dbSNP:750958739
1220 1220 c, t dbSNP:372370740
1258 1258 a, g dbSNP:780823952
1284 1284 c, t dbSNP:760561796
1289 1289 c, t dbSNP:372917889
1290 1290 a, g dbSNP:377137046
1294 1294 a, g dbSNP:762166003
1295 1295 c, g dbSNP:765367131
1299 1299 a, g dbSNP:750605346
1304 1304 c, g dbSNP:763236095
1313 1313 c, t dbSNP:766726971
1316 1316 g, t dbSNP:752135257
1333 1333 c, t dbSNP:755522116
1334 1334 a, g dbSNP:763738666
1340 1340 -, gtcctcatc dbSNP:752470637
1341 1341 -, gtcctcatc dbSNP:756072872
1347 1347 a, g dbSNP:370899258
1349 1349 c, t dbSNP:374673267
1350 1350 a, g dbSNP:756990012
1352 1352 c, g dbSNP:778442876
1358 1358 c, t dbSNP:377066074
1359 1359 a, g dbSNP:758155412
1361 1361 c, t dbSNP:779771298
1367 1367 c, t dbSNP:563165417
1369 1369 c, t dbSNP:768578956
1370 1370 c, g dbSNP:776752641
1371 1371 a, g dbSNP:748195263
1376 1376 c, g, t dbSNP:371265207
1382 1382 c, g dbSNP:375930278
1388 1388 c, t dbSNP:367740277
1391 1391 a, t dbSNP:370190466
1394 1394 c, t dbSNP:760186534
1402 1402 c, g dbSNP:768122957
1404 1404 a, g dbSNP:753197971
1406 1406 c, g, t dbSNP:756724237
1409 1409 a, g dbSNP:750061748
1417 1417 a, c dbSNP:758043762
1419 1419 c, g, t dbSNP:779861274
1420 1420 a, g dbSNP:374070870
1422 1422 a, g dbSNP:367958563
1426 1426 a, c dbSNP:548499764
1428 1428 a, g dbSNP:769786955
1431 1431 a, g dbSNP:773319529
1432 1432 c, g dbSNP:749514943
1441 1441 a, g dbSNP:771275054
1442 1442 c, t dbSNP:774912689
1449 1449 c, t dbSNP:759990494
1450 1450 a, c dbSNP:767926770
1457 1457 c, t dbSNP:775891878
1459 1459 a, g dbSNP:559714284
1460 1460 g, t dbSNP:764698401
1471 1471 a, c dbSNP:138594896
1476 1476 a, g dbSNP:551815240
1493 1493 c, t dbSNP:551252413
1502 1502 -, c dbSNP:563042226
1512 1512 a, g dbSNP:184906622
1540 1540 c, t dbSNP:538015427
1545 1545 c, g dbSNP:189770497
1574 1574 c, t dbSNP:568279121
1660 1660 a, g dbSNP:535722985
1680 1680 -, g dbSNP:575035831
1705 1705 -, g dbSNP:533224363
1723 1723 c, g dbSNP:9577506
1724 1724 c, t dbSNP:185994999
1730 1730 -, g dbSNP:549449419
1738 1738 g, t dbSNP:112130650
1774 1774 c, t dbSNP:9577507
1775 1775 c, t dbSNP:9577508
1782 1782 -, g dbSNP:551904130
1787 1787 g, t dbSNP:577284312
1800 1800 c, g, t dbSNP:549254879
1806 1806 c, g dbSNP:574739452
1809 1809 a, g dbSNP:542108523
1823 1823 a, g dbSNP:370192792
1871 1871 c, t dbSNP:1803895
1872 1872 a, g dbSNP:560424821
1895 1895 g, t dbSNP:527248541
1977 1977 a, g dbSNP:551907417
1983 1983 c, t dbSNP:564172589
1984 1984 a, g dbSNP:186117631
2051 2051 a, c dbSNP:8001808
2138 2138 a, g dbSNP:766841804
2143 2143 c, t dbSNP:11541825
2144 2144 a, g dbSNP:202113105
2163 2163 c, t dbSNP:111453566
2169 2169 c, t dbSNP:372926640
2187 2187 c, t dbSNP:754290171
2207 2207 a, t dbSNP:535684469
2232 2232 a, t dbSNP:547671563
2233 2233 -, t, tt dbSNP:141255835
2233 2233 a, t dbSNP:9603825
2239 2239 a, t dbSNP:3945894
2242 2242 -, t dbSNP:3833987
2271 2271 a, g dbSNP:558666741
2273 2273 g, t dbSNP:778339998
2287 2287 a, t dbSNP:570855038
2289 2289 c, t dbSNP:1057122
2293 2293 a, g dbSNP:191066173
2295 2295 c, t dbSNP:556658397
2301 2301 c, t dbSNP:15203
2315 2315 g, t dbSNP:3197762
2317 2317 c, t dbSNP:148293839
2318 2318 a, g dbSNP:567211353
2324 2324 a, c dbSNP:1803896
2327 2327 a, g dbSNP:554014622
2348 2348 a, g dbSNP:182357515
2370 2370 a, g dbSNP:546510380
2416 2416 g, t dbSNP:3752960

Target ORF information:

RefSeq Version XM_011537495
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens lysosomal-associated membrane protein 1 (LAMP1), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1-C-(k)DYK
XM_011537495

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
ATGGCGGCCC CCGGCAGCGC CCGGCGACCC CTGCTGCTGC TACTGCTGTT GCTGCTGCTC 
GGCCTCATGC ATTGTGCGTC AGCAGCAATG TTTATGGTGA AAAATGGCAA CGGGACCGCG
TGCATAATGG CCAACTTCTC TGCTGCCTTC TCAGTGAACT ACGACACCAA GAGTGGCCCT
AAGAACATGA CCTTTGACCT GCCATCAGAT GCCACAGTGG TGCTCAACCG CAGCTCCTGT
GGAAAAGAGA ACACTTCTGA CCCCAGTCTC GTGATTGCTT TTGGAAGAGG ACATACACTC
ACTCTCAATT TCACGAGAAA TGCAACACGT TACAGCGTCC AGCTCATGAG TTTTGTTTAT
AACTTGTCAG ACACACACCT TTTCCCCAAT GCGAGCTCCA AAGAGACACG CTGTGAACAA
GACAGGCCTT CCCCAACCAC AGCGCCCCCT GCGCCACCCA GCCCCTCGCC CTCACCCGTG
CCCAAGAGCC CCTCTGTGGA CAAGTACAAC GTGAGCGGCA CCAACGGGAC CTGCCTGCTG
GCCAGCATGG GGCTGCAGCT GAACCTCACC TATGAGAGGA AGGACAACAC GACGGTGACA
AGGCTTCTCA ACATCAACCC CAACAAGACC TCGGCCAGCG GGAGCTGCGG CGCCCACCTG
GTGACTCTGG AGCTGCACAG CGAGGGCACC ACCGTCCTGC TCTTCCAGTT CGGGATGAAT
GCAAGTTCTA GCCGGTTTTT CCTACAAGGA ATCCAGTTGA ATACAATTCT TCCTGACGCC
AGAGACCCTG CCTTTAAAGC TGCCAACGGC TCCCTGCGAG CGCTGCAGGC CACAGTCGGC
AATTCCTACA AGTGCAACGC GGAGGAGCAC GTCCGTGTCA CGAAGGCGTT TTCAGTCAAT
ATATTCAAAG TGTGGGTCCA GGCTTTCAAG GTGGAAGGTG GCCAGTTTGG CTCTGTGGAG
GAGTGTCTGC TGGACGAGAA CAGCATGCTG ATCCCCATCG CTGTGGGTGG TGCCCTGGCG
GGGCTGGTCC TCATCGTCCT CATCGCCTAC CTCGTCGGCA GGAAGAGGAG TCACGCAGGC
TACCAGACTA TCTAG

The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.


CloneID OHu09610D
Sequence Information ORF Nucleotide Sequence (Length: 1254bp)
Protein sequence
SNP
Vector pcDNA3.1-C-(k)DYK or customized vector
Clone information Clone Map
Tag on pcDNA3.1-C-(k)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 15-MAR-2015
Organism Homo sapiens (human)
Product lysosome-associated membrane glycoprotein 1 precursor
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DB462451.1, BU849686.1 and BC025335.1. On Aug 16, 2006 this sequence version replaced gi:7669500. Summary: The protein encoded by this gene is a member of a family of membrane glycoproteins. This glycoprotein provides selectins with carbohydrate ligands. It may also play a role in tumor cell metastasis. [provided by RefSeq, Jul 2008]. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC025335.1, BC093044.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
ATGGCGGCCC CCGGCAGCGC CCGGCGACCC CTGCTGCTGC TACTGCTGTT GCTGCTGCTC 
GGCCTCATGC ATTGTGCGTC AGCAGCAATG TTTATGGTGA AAAATGGCAA CGGGACCGCG
TGCATAATGG CCAACTTCTC TGCTGCCTTC TCAGTGAACT ACGACACCAA GAGTGGCCCT
AAGAACATGA CCTTTGACCT GCCATCAGAT GCCACAGTGG TGCTCAACCG CAGCTCCTGT
GGAAAAGAGA ACACTTCTGA CCCCAGTCTC GTGATTGCTT TTGGAAGAGG ACATACACTC
ACTCTCAATT TCACGAGAAA TGCAACACGT TACAGCGTCC AGCTCATGAG TTTTGTTTAT
AACTTGTCAG ACACACACCT TTTCCCCAAT GCGAGCTCCA AAGAAATCAA GACTGTGGAA
TCTATAACTG ACATCAGGGC AGATATAGAT AAAAAATACA GATGTGTTAG TGGCACCCAG
GTCCACATGA ACAACGTGAC CGTAACGCTC CATGATGCCA CCATCCAGGC GTACCTTTCC
AACAGCAGCT TCAGCAGGGG AGAGACACGC TGTGAACAAG ACAGGCCTTC CCCAACCACA
GCGCCCCCTG CGCCACCCAG CCCCTCGCCC TCACCCGTGC CCAAGAGCCC CTCTGTGGAC
AAGTACAACG TGAGCGGCAC CAACGGGACC TGCCTGCTGG CCAGCATGGG GCTGCAGCTG
AACCTCACCT ATGAGAGGAA GGACAACACG ACGGTGACAA GGCTTCTCAA CATCAACCCC
AACAAGACCT CGGCCAGCGG GAGCTGCGGC GCCCACCTGG TGACTCTGGA GCTGCACAGC
GAGGGCACCA CCGTCCTGCT CTTCCAGTTC GGGATGAATG CAAGTTCTAG CCGGTTTTTC
CTACAAGGAA TCCAGTTGAA TACAATTCTT CCTGACGCCA GAGACCCTGC CTTTAAAGCT
GCCAACGGCT CCCTGCGAGC GCTGCAGGCC ACAGTCGGCA ATTCCTACAA GTGCAACGCG
GAGGAGCACG TCCGTGTCAC GAAGGCGTTT TCAGTCAATA TATTCAAAGT GTGGGTCCAG
GCTTTCAAGG TGGAAGGTGG CCAGTTTGGC TCTGTGGAGG AGTGTCTGCT GGACGAGAAC
AGCATGCTGA TCCCCATCGC TGTGGGTGGT GCCCTGGCGG GGCTGGTCCT CATCGTCCTC
ATCGCCTACC TCGTCGGCAG GAAGAGGAGT CACGCAGGCT ACCAGACTAT CTAG
The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.
RefSeqNP_005552.3
CDS282..1535
Misc Feature(1)366..863(+)
Misc Feature(2)390..392(+)
Misc Feature(3)402..521(+)
Misc Feature(4)414..416(+)
Misc Feature(5)465..467(+)
Misc Feature(6)507..509(+)
Misc Feature(7)531..533(+)
Misc Feature(8)588..590(+)
Misc Feature(9)600..602(+)
Misc Feature(10)612..1532(+)
Misc Feature(11)642..644(+)
Misc Feature(12)669..671(+)
Misc Feature(13)744..854(+)
Misc Feature(14)774..776(+)
Misc Feature(15)822..824(+)
Misc Feature(16)864..962(+)
Misc Feature(17)870..872(+)
Misc Feature(18)876..878(+)
Misc Feature(19)879..881(+)
Misc Feature(20)900..902(+)
Misc Feature(21)906..908(+)
Misc Feature(22)912..914(+)
Misc Feature(23)948..950(+)
Misc Feature(24)963..1427(+)
Misc Feature(25)963..965(+)
Misc Feature(26)972..1088(+)
Misc Feature(27)1002..1004(+)
Misc Feature(28)1026..1028(+)
Misc Feature(29)1062..1064(+)
Misc Feature(30)1158..1160(+)
Misc Feature(31)1245..1247(+)
Misc Feature(32)1293..1406(+)
Misc Feature(33)1422..1514(+)
Misc Feature(34)1425..1472(+)
Misc Feature(35)1428..1496(+)
Exon (1)1..342
Gene:LAMP1
Gene Synonym:
Exon (2)343..464
Gene:LAMP1
Gene Synonym:
Exon (3)465..684
Gene:LAMP1
Gene Synonym:
Exon (4)685..843
Gene:LAMP1
Gene Synonym:
Exon (5)844..1031
Gene:LAMP1
Gene Synonym:
Exon (6)1032..1157
Gene:LAMP1
Gene Synonym:
Exon (7)1158..1224
Gene:LAMP1
Gene Synonym:
Exon (8)1225..1395
Gene:LAMP1
Gene Synonym:
Exon (9)1396..2540
Gene:LAMP1
Gene Synonym:
Translation
Position Chain Variation Link
30 30 c, g dbSNP:113228666
107 107 g, t dbSNP:536548948
115 115 g, t dbSNP:762261320
117 117 c, t dbSNP:769446555
125 125 c, t dbSNP:555433438
131 131 a, c dbSNP:775529395
140 140 c, t dbSNP:186336451
184 184 c, t dbSNP:570438289
230 230 a, c dbSNP:188339460
244 244 a, g dbSNP:764090399
249 249 a, c dbSNP:753909918
251 251 c, t dbSNP:553031096
252 252 c, t dbSNP:757341892
254 254 c, t dbSNP:7983578
261 261 c, g, t dbSNP:144852732
277 277 g, t dbSNP:563930959
326 326 a, g dbSNP:531065511
343 343 a, g dbSNP:776655908
347 347 c, g dbSNP:375926415
349 349 c, t dbSNP:180717643
355 355 a, g dbSNP:200783496
356 356 g, t dbSNP:370111946
358 358 c, t dbSNP:199700645
359 359 a, g dbSNP:766554441
362 362 a, g dbSNP:751917334
368 368 a, g dbSNP:560950701
369 369 a, g dbSNP:564189253
373 373 g, t dbSNP:781372178
375 375 a, g dbSNP:748693352
380 380 a, g dbSNP:756632821
388 388 a, g dbSNP:74628343
392 392 c, g, t dbSNP:184787579
393 393 c, g dbSNP:775189716
398 398 c, t dbSNP:372572919
399 399 a, g dbSNP:768499433
400 400 c, t dbSNP:776227318
401 401 g, t dbSNP:375160189
404 404 c, t dbSNP:765152092
409 409 c, t dbSNP:773319736
412 412 c, t dbSNP:762996222
413 413 a, c, t dbSNP:766396501
417 417 c, t dbSNP:755089559
421 421 -, ctg dbSNP:757490846
423 423 g, t dbSNP:767939299
427 427 c, t dbSNP:752992439
439 439 a, c dbSNP:756753251
442 442 a, g dbSNP:778396638
443 443 c, t dbSNP:745423607
444 444 a, g dbSNP:201650159
472 472 c, t dbSNP:369224631
475 475 c, t dbSNP:751025906
482 482 a, g dbSNP:754696863
488 488 a, t dbSNP:77735431
490 490 a, g dbSNP:200032545
498 498 a, g dbSNP:769607827
505 505 c, t dbSNP:777478201
506 506 c, g, t dbSNP:369272384
508 508 a, t dbSNP:774558141
510 510 c, t dbSNP:61750829
511 511 a, g dbSNP:61750830
512 512 c, g dbSNP:775880078
515 515 c, t dbSNP:760942957
520 520 a, g dbSNP:764562689
528 528 a, g dbSNP:754236794
532 532 a, c dbSNP:762446154
533 533 c, t dbSNP:765628095
540 540 a, g dbSNP:751126775
552 552 a, g dbSNP:754467186
555 555 a, g dbSNP:780640418
575 575 c, t dbSNP:530562458
577 577 c, g dbSNP:755705842
585 585 c, g dbSNP:777603253
587 587 c, t dbSNP:749079016
588 588 a, g dbSNP:757261971
595 595 c, t dbSNP:377651869
596 596 a, g dbSNP:745772477
598 598 a, g dbSNP:549097040
603 603 g, t dbSNP:780652365
609 609 c, t dbSNP:370862051
610 610 a, g, t dbSNP:142333942
611 611 g, t dbSNP:768991422
617 617 c, t dbSNP:528276083
618 618 a, g dbSNP:374537669
622 622 a, t dbSNP:765586426
639 639 g, t dbSNP:376324908
640 640 a, g dbSNP:547401171
649 649 c, t dbSNP:773621462
655 655 a, c dbSNP:113219412
657 657 c, t dbSNP:767028185
660 660 c, g dbSNP:111455645
665 665 c, t dbSNP:755832333
670 670 a, g dbSNP:763705634
672 672 a, g dbSNP:753718205
673 673 c, t dbSNP:757027565
674 674 a, g dbSNP:778731588
677 677 a, c dbSNP:745800693
688 688 g, t dbSNP:761465679
692 692 c, g dbSNP:368162623
694 694 c, t dbSNP:750224091
695 695 -, tg dbSNP:773968025
715 715 c, t dbSNP:758445807
724 724 a, t dbSNP:780113794
726 726 a, g dbSNP:751491315
727 727 c, t dbSNP:755377731
761 761 a, g dbSNP:55898120
768 768 a, g dbSNP:373899040
770 770 g, t dbSNP:534819001
772 772 a, g dbSNP:375227374
776 776 c, t dbSNP:778066534
782 782 c, t dbSNP:371847599
783 783 a, g dbSNP:191812061
787 787 c, t dbSNP:774863907
788 788 a, c, g dbSNP:369180138
792 792 c, t dbSNP:776152874
793 793 a, c, g dbSNP:558852088
805 805 g, t dbSNP:764909087
806 806 c, g dbSNP:750230850
808 808 a, c, g dbSNP:372906564
809 809 a, g dbSNP:751544849
810 810 a, g dbSNP:754904750
811 811 c, t dbSNP:777432410
812 812 a, g dbSNP:752817199
814 814 a, g dbSNP:756331260
820 820 a, c dbSNP:778034561
827 827 c, g dbSNP:749464893
835 835 -, gcc dbSNP:199777509
837 837 a, c dbSNP:9577503
845 845 c, g dbSNP:779295072
846 846 a, t dbSNP:112228471
849 849 c, t dbSNP:371918328
850 850 a, g dbSNP:780627739
852 852 c, t dbSNP:747410684
853 853 a, g dbSNP:769380370
858 858 c, g dbSNP:559462906
859 859 a, g dbSNP:748999243
863 863 a, c dbSNP:770677734
874 874 c, g dbSNP:774354712
883 883 c, t dbSNP:759391093
884 884 a, g dbSNP:374933256
892 892 c, t dbSNP:9577229
893 893 a, g dbSNP:545159189
894 894 c, t dbSNP:764254468
904 904 c, t dbSNP:753888731
907 907 c, t dbSNP:200052831
908 908 a, g dbSNP:530779384
909 909 c, t dbSNP:750590451
911 911 c, t dbSNP:758798632
917 917 c, t dbSNP:376761620
918 918 a, g dbSNP:747575303
920 920 a, g dbSNP:755418751
921 921 c, t dbSNP:777467422
925 925 a, g dbSNP:748803182
926 926 a, g dbSNP:56313942
938 938 a, g dbSNP:770764042
943 943 a, g dbSNP:774159757
949 949 a, g dbSNP:745443481
950 950 c, t dbSNP:544828159
953 953 a, g dbSNP:775096058
956 956 c, g, t dbSNP:760712195
957 957 a, g dbSNP:776754723
958 958 a, g dbSNP:761898603
961 961 c, g dbSNP:548996606
965 965 c, t dbSNP:750678018
971 971 c, g dbSNP:763038744
1009 1009 c, t dbSNP:369669372
1018 1018 a, g dbSNP:567560779
1028 1028 a, c dbSNP:755576074
1029 1029 a, g dbSNP:781761301
1032 1032 a, c dbSNP:758133363
1033 1033 c, t dbSNP:370286796
1035 1035 a, g dbSNP:567894310
1042 1042 a, g dbSNP:768474200
1053 1053 a, g dbSNP:780920291
1055 1055 c, t dbSNP:748135694
1059 1059 c, t dbSNP:769689911
1061 1061 c, t dbSNP:773409402
1064 1064 c, g, t dbSNP:749315723
1069 1069 a, c, t dbSNP:774188089
1072 1072 c, t dbSNP:759790645
1073 1073 a, g dbSNP:768014512
1079 1079 c, t dbSNP:535315140
1088 1088 c, t dbSNP:761301142
1089 1089 a, g dbSNP:764500535
1090 1090 a, g dbSNP:750003380
1091 1091 c, t dbSNP:373542595
1092 1092 a, g dbSNP:765876942
1096 1096 a, g dbSNP:751196509
1105 1105 c, t dbSNP:754605658
1120 1120 c, g dbSNP:781006446
1121 1121 c, t dbSNP:747935241
1122 1122 a, g dbSNP:756102656
1123 1123 a, g dbSNP:761588000
1127 1127 c, t dbSNP:777585404
1129 1129 c, t dbSNP:749182188
1133 1133 c, t dbSNP:139701558
1134 1134 a, g dbSNP:774438040
1137 1137 -, ctg dbSNP:775776268
1137 1137 c, t dbSNP:746141077
1142 1142 c, t dbSNP:772389719
1151 1151 c, t dbSNP:776061850
1152 1152 a, c, g dbSNP:538647194
1159 1159 a, g dbSNP:375412629
1164 1164 a, c dbSNP:753635721
1173 1173 c, t dbSNP:757205414
1174 1174 a, g dbSNP:201021547
1186 1186 a, g dbSNP:371542422
1188 1188 a, g dbSNP:758552201
1193 1193 c, t dbSNP:41286618
1195 1195 a, g dbSNP:369159731
1207 1207 c, t dbSNP:9577230
1217 1217 c, t dbSNP:184805902
1226 1226 a, c, t dbSNP:200239310
1232 1232 c, t dbSNP:773115282
1240 1240 c, g dbSNP:41286620
1244 1244 a, c dbSNP:766409505
1247 1247 c, t dbSNP:2270393
1248 1248 a, g dbSNP:371034089
1258 1258 a, g dbSNP:767455348
1261 1261 c, t dbSNP:374678550
1262 1262 a, g dbSNP:200140748
1268 1268 a, g dbSNP:151133886
1277 1277 c, g, t dbSNP:374840461
1285 1285 c, g dbSNP:779485504
1286 1286 c, g dbSNP:746290302
1291 1291 a, g dbSNP:768240089
1298 1298 c, t dbSNP:201877351
1299 1299 a, g dbSNP:747877257
1300 1300 c, t dbSNP:769570200
1301 1301 a, g dbSNP:372087869
1306 1306 a, t dbSNP:762855305
1310 1310 c, t dbSNP:766211164
1311 1311 a, g dbSNP:558315912
1313 1313 a, c dbSNP:759344932
1314 1314 c, t dbSNP:767683537
1315 1315 a, g dbSNP:752685874
1316 1316 c, t dbSNP:116326724
1322 1322 a, g dbSNP:376013627
1326 1326 c, g dbSNP:753998031
1327 1327 c, t dbSNP:757618803
1328 1328 a, g dbSNP:368427348
1343 1343 a, g dbSNP:750958739
1346 1346 c, t dbSNP:372370740
1384 1384 a, g dbSNP:780823952
1410 1410 c, t dbSNP:760561796
1415 1415 c, t dbSNP:372917889
1416 1416 a, g dbSNP:377137046
1420 1420 a, g dbSNP:762166003
1421 1421 c, g dbSNP:765367131
1425 1425 a, g dbSNP:750605346
1430 1430 c, g dbSNP:763236095
1439 1439 c, t dbSNP:766726971
1442 1442 g, t dbSNP:752135257
1459 1459 c, t dbSNP:755522116
1460 1460 a, g dbSNP:763738666
1466 1466 -, gtcctcatc dbSNP:752470637
1467 1467 -, gtcctcatc dbSNP:756072872
1473 1473 a, g dbSNP:370899258
1475 1475 c, t dbSNP:374673267
1476 1476 a, g dbSNP:756990012
1478 1478 c, g dbSNP:778442876
1484 1484 c, t dbSNP:377066074
1485 1485 a, g dbSNP:758155412
1487 1487 c, t dbSNP:779771298
1493 1493 c, t dbSNP:563165417
1495 1495 c, t dbSNP:768578956
1496 1496 c, g dbSNP:776752641
1497 1497 a, g dbSNP:748195263
1502 1502 c, g, t dbSNP:371265207
1508 1508 c, g dbSNP:375930278
1514 1514 c, t dbSNP:367740277
1517 1517 a, t dbSNP:370190466
1520 1520 c, t dbSNP:760186534
1528 1528 c, g dbSNP:768122957
1530 1530 a, g dbSNP:753197971
1532 1532 c, g, t dbSNP:756724237
1535 1535 a, g dbSNP:750061748
1543 1543 a, c dbSNP:758043762
1545 1545 c, g, t dbSNP:779861274
1546 1546 a, g dbSNP:374070870
1548 1548 a, g dbSNP:367958563
1552 1552 a, c dbSNP:548499764
1554 1554 a, g dbSNP:769786955
1557 1557 a, g dbSNP:773319529
1558 1558 c, g dbSNP:749514943
1567 1567 a, g dbSNP:771275054
1568 1568 c, t dbSNP:774912689
1575 1575 c, t dbSNP:759990494
1576 1576 a, c dbSNP:767926770
1583 1583 c, t dbSNP:775891878
1585 1585 a, g dbSNP:559714284
1586 1586 g, t dbSNP:764698401
1597 1597 a, c dbSNP:138594896
1602 1602 a, g dbSNP:551815240
1619 1619 c, t dbSNP:551252413
1628 1628 -, c dbSNP:563042226
1638 1638 a, g dbSNP:184906622
1666 1666 c, t dbSNP:538015427
1671 1671 c, g dbSNP:189770497
1700 1700 c, t dbSNP:568279121
1786 1786 a, g dbSNP:535722985
1806 1806 -, g dbSNP:575035831
1831 1831 -, g dbSNP:533224363
1849 1849 c, g dbSNP:9577506
1850 1850 c, t dbSNP:185994999
1856 1856 -, g dbSNP:549449419
1864 1864 g, t dbSNP:112130650
1900 1900 c, t dbSNP:9577507
1901 1901 c, t dbSNP:9577508
1908 1908 -, g dbSNP:551904130
1913 1913 g, t dbSNP:577284312
1926 1926 c, g, t dbSNP:549254879
1932 1932 c, g dbSNP:574739452
1935 1935 a, g dbSNP:542108523
1949 1949 a, g dbSNP:370192792
1997 1997 c, t dbSNP:1803895
1998 1998 a, g dbSNP:560424821
2021 2021 g, t dbSNP:527248541
2103 2103 a, g dbSNP:551907417
2109 2109 c, t dbSNP:564172589
2110 2110 a, g dbSNP:186117631
2177 2177 a, c dbSNP:8001808
2264 2264 a, g dbSNP:766841804
2269 2269 c, t dbSNP:11541825
2270 2270 a, g dbSNP:202113105
2289 2289 c, t dbSNP:111453566
2295 2295 c, t dbSNP:372926640
2313 2313 c, t dbSNP:754290171
2333 2333 a, t dbSNP:535684469
2358 2358 a, t dbSNP:547671563
2359 2359 -, t, tt dbSNP:141255835
2359 2359 a, t dbSNP:9603825
2365 2365 a, t dbSNP:3945894
2368 2368 -, t dbSNP:3833987
2397 2397 a, g dbSNP:558666741
2399 2399 g, t dbSNP:778339998
2413 2413 a, t dbSNP:570855038
2415 2415 c, t dbSNP:1057122
2419 2419 a, g dbSNP:191066173
2421 2421 c, t dbSNP:556658397
2427 2427 c, t dbSNP:15203
2441 2441 g, t dbSNP:3197762
2443 2443 c, t dbSNP:148293839
2444 2444 a, g dbSNP:567211353
2450 2450 a, c dbSNP:1803896
2453 2453 a, g dbSNP:554014622
2474 2474 a, g dbSNP:182357515
2496 2496 a, g dbSNP:546510380

Target ORF information:

RefSeq Version NM_005561
Organism Homo sapiens (human)
Definition Homo sapiens lysosomal-associated membrane protein 1 (LAMP1), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1-C-(k)DYK
NM_005561

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
ATGGCGGCCC CCGGCAGCGC CCGGCGACCC CTGCTGCTGC TACTGCTGTT GCTGCTGCTC 
GGCCTCATGC ATTGTGCGTC AGCAGCAATG TTTATGGTGA AAAATGGCAA CGGGACCGCG
TGCATAATGG CCAACTTCTC TGCTGCCTTC TCAGTGAACT ACGACACCAA GAGTGGCCCT
AAGAACATGA CCTTTGACCT GCCATCAGAT GCCACAGTGG TGCTCAACCG CAGCTCCTGT
GGAAAAGAGA ACACTTCTGA CCCCAGTCTC GTGATTGCTT TTGGAAGAGG ACATACACTC
ACTCTCAATT TCACGAGAAA TGCAACACGT TACAGCGTCC AGCTCATGAG TTTTGTTTAT
AACTTGTCAG ACACACACCT TTTCCCCAAT GCGAGCTCCA AAGAAATCAA GACTGTGGAA
TCTATAACTG ACATCAGGGC AGATATAGAT AAAAAATACA GATGTGTTAG TGGCACCCAG
GTCCACATGA ACAACGTGAC CGTAACGCTC CATGATGCCA CCATCCAGGC GTACCTTTCC
AACAGCAGCT TCAGCAGGGG AGAGACACGC TGTGAACAAG ACAGGCCTTC CCCAACCACA
GCGCCCCCTG CGCCACCCAG CCCCTCGCCC TCACCCGTGC CCAAGAGCCC CTCTGTGGAC
AAGTACAACG TGAGCGGCAC CAACGGGACC TGCCTGCTGG CCAGCATGGG GCTGCAGCTG
AACCTCACCT ATGAGAGGAA GGACAACACG ACGGTGACAA GGCTTCTCAA CATCAACCCC
AACAAGACCT CGGCCAGCGG GAGCTGCGGC GCCCACCTGG TGACTCTGGA GCTGCACAGC
GAGGGCACCA CCGTCCTGCT CTTCCAGTTC GGGATGAATG CAAGTTCTAG CCGGTTTTTC
CTACAAGGAA TCCAGTTGAA TACAATTCTT CCTGACGCCA GAGACCCTGC CTTTAAAGCT
GCCAACGGCT CCCTGCGAGC GCTGCAGGCC ACAGTCGGCA ATTCCTACAA GTGCAACGCG
GAGGAGCACG TCCGTGTCAC GAAGGCGTTT TCAGTCAATA TATTCAAAGT GTGGGTCCAG
GCTTTCAAGG TGGAAGGTGG CCAGTTTGGC TCTGTGGAGG AGTGTCTGCT GGACGAGAAC
AGCATGCTGA TCCCCATCGC TGTGGGTGGT GCCCTGGCGG GGCTGGTCCT CATCGTCCTC
ATCGCCTACC TCGTCGGCAG GAAGAGGAGT CACGCAGGCT ACCAGACTAT CTAG

The stop codons will be deleted if pcDNA3.1-C-(k)DYK vector is selected.