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POLR1D polymerase (RNA) I polypeptide D, 16kDa [Homo sapiens (human)]

Gene Symbol POLR1D
Entrez Gene ID 51082
Full Name polymerase (RNA) I polypeptide D, 16kDa
Synonyms AC19, POLR1C, RPA16, RPA9, RPAC2, RPC16, RPO1-3, TCS2
General protein information
Preferred Names
DNA-directed RNA polymerases I and III subunit RPAC2
Names
DNA-directed RNA polymerases I and III subunit RPAC2
RNA polymerases I and III subunit AC2
DNA-directed RNA polymerase I subunit D
Gene Type protein-coding
Organism Homo sapiens (human)
Genome

13

13q12.2

Summary The protein encoded by this gene is a component of the RNA polymerase I and RNA polymerase III complexes, which function in the synthesis of ribosomal RNA precursors and small RNAs, respectively. Mutations in this gene are a cause of Treacher Collins syndrome (TCS), a craniofacial development disorder. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Apr 2011]. lac of sum
Disorder MIM:

613715

Disorder Html: Treacher Collins syndrome 2, 613717 (3)





The following POLR1D gene sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POLR1D gene which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

CloneID RefSeq Accession Definition **Vector *Turnaround time Price Select
OHu16733 XM_005266412 PREDICTED: Homo sapiens polymerase (RNA) I polypeptide D, 16kDa (POLR1D), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 5-7 $99
OHu16955 XM_005266414 PREDICTED: Homo sapiens polymerase (RNA) I polypeptide D, 16kDa (POLR1D), transcript variant X2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 5-7 $99
OHu16733 NM_015972 Homo sapiens polymerase (RNA) I polypeptide D, 16kDa (POLR1D), transcript variant 1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 5-7 $99
OHu16955 NM_152705 Homo sapiens polymerase (RNA) I polypeptide D, 16kDa (POLR1D), transcript variant 2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 5-7 $99
OHu18322 NM_001206559 Homo sapiens polymerase (RNA) I polypeptide D, 16kDa (POLR1D), transcript variant 3, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 5-7 $99

*Business Day
**You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.


CloneID OHu16733
Accession Version XM_005266412.1
Sequence Information ORF Nucleotide Sequence (Length: 402bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector
Clone information Clone Map
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product DNA-directed RNA polymerases I and III subunit RPAC2 isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_024524.15) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
ATGGAAGAGG ATCAGGAGCT GGAGAGAAAA ATATCTGGAT TGAAGACCTC AATGGCTGAA 
GGCGAGAGGA AGACAGCCCT GGAAATGGTC CAGGCAGCTG GAACAGATAG ACACTGTGTG
ACATTTGTAT TGCACGAGGA AGACCATACC CTAGGAAATT CTCTACGTTA CATGATCATG
AAGAACCCGG AAGTGGAATT TTGTGGTTAC ACTACGACCC ATCCTTCAGA GAGCAAAATT
AATTTACGCA TTCAGACTCG AGGTACCCTT CCAGCTGTTG AGCCATTTCA GAGAGGCCTG
AATGAGCTCA TGAATGTCTG CCAACATGTG CTTGACAAGT TTGAGGCCAG CATAAAGGAC
TATAAGGATC AAAAAGCAAG CAGAAATGAA TCCACATTCT AG
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeqXP_005266469.1
CDS1046..1447
Misc Feature(1)1133..1387(+)
Misc Feature(2)1163..>1255(+)
Misc Feature(3)1175..1381(+)
Misc Feature(4)1190..1270(+)
Misc Feature(5)1211..1270(+)
Misc Feature(6)1241..1243(+)
Translation
Position Chain Variation Link
23 23 c, g dbSNP:760797855
28 28 a, c dbSNP:565382779
56 56 a, c dbSNP:534322007
57 57 c, t dbSNP:532090062
64 64 c, t dbSNP:554609543
92 92 c, t dbSNP:113269948
100 100 a, c dbSNP:543575845
156 156 a, g dbSNP:556906809
167 167 g, t dbSNP:764533253
170 170 g, t dbSNP:618733
170 170 -, t dbSNP:200073353
171 171 g, t dbSNP:552785988
181 181 c, t dbSNP:565278863
184 184 a, g dbSNP:527643108
205 205 a, g dbSNP:541079085
219 219 c, g dbSNP:762091793
237 237 c, g dbSNP:372393530
249 249 a, g dbSNP:2232664
250 250 a, g dbSNP:530162395
265 265 a, g dbSNP:550333029
277 277 c, g dbSNP:775987815
303 303 c, g dbSNP:747756670
306 306 a, c dbSNP:113482227
328 328 c, g dbSNP:570193651
348 348 a, c dbSNP:377175053
367 367 c, t dbSNP:145332007
378 378 a, g dbSNP:2232665
393 393 a, g dbSNP:763019403
414 414 -, a dbSNP:543438329
415 415 a, c dbSNP:754011357
416 416 a, g dbSNP:761896904
420 420 c, t dbSNP:2232669
437 437 c, t dbSNP:2232670
451 451 c, t dbSNP:2232671
452 452 a, g dbSNP:11617035
477 477 c, t dbSNP:754425143
488 488 a, g, t dbSNP:113015696
507 507 a, g dbSNP:758942763
631 631 a, g dbSNP:546026113
646 646 g, t dbSNP:2232672
683 683 c, t dbSNP:573193850
729 729 c, g dbSNP:564534097
750 750 c, t dbSNP:2232673
757 757 c, t dbSNP:2232674
773 773 a, c dbSNP:543598838
790 790 c, g dbSNP:569344015
811 811 c, t dbSNP:532529167
814 814 a, g dbSNP:2232675
815 815 a, g dbSNP:559591760
830 830 c, g dbSNP:528812810
864 864 a, g dbSNP:548156105
886 886 c, t dbSNP:12875930
897 897 c, t dbSNP:2232676
904 904 c, t dbSNP:12875939
922 922 c, t dbSNP:537150165
923 923 c, t dbSNP:550361170
934 934 c, t dbSNP:570575220
936 936 a, c dbSNP:2232677
938 938 a, c dbSNP:553230423
939 939 c, t dbSNP:2232678
950 950 a, c dbSNP:535423507
958 958 c, g dbSNP:2232679
972 972 c, t dbSNP:574695978
978 978 a, g dbSNP:543808650
983 983 c, g dbSNP:563407988
995 995 a, g dbSNP:576947862
996 996 c, g dbSNP:376899179
999 999 a, c, t dbSNP:749220350
1001 1001 a, c dbSNP:754787294
1003 1003 a, c dbSNP:778495401
1006 1006 c, t dbSNP:375008435
1007 1007 a, c, t dbSNP:752330161
1007 1007 -, c dbSNP:764374705
1012 1012 a, c dbSNP:545965891
1016 1016 c, g dbSNP:559557492
1019 1019 a, c dbSNP:200891022
1025 1025 a, g, t dbSNP:2232680
1030 1030 a, g, t dbSNP:746196920
1044 1044 c, t dbSNP:775835096
1045 1045 g, t dbSNP:763146884
1046 1046 a, g dbSNP:768779873
1051 1051 a, g, t dbSNP:376051642
1087 1087 -, gaa dbSNP:752153066
1099 1099 c, g dbSNP:529013502
1102 1102 g, t dbSNP:776525888
1106 1106 a, g dbSNP:759527489
1109 1109 a, g dbSNP:765011144
1111 1111 a, g dbSNP:151041219
1119 1119 c, t dbSNP:777412814
1123 1123 c, t dbSNP:372189960
1124 1124 c, t dbSNP:763616303
1142 1142 c, g dbSNP:751267443
1151 1151 a, g dbSNP:756808529
1184 1184 a, g dbSNP:767196650
1189 1189 c, t dbSNP:750965300
1195 1195 c, g dbSNP:756626537
1205 1205 g, t dbSNP:142365486
1206 1206 c, g dbSNP:749563986
1210 1210 a, g dbSNP:755398859
1217 1217 a, c dbSNP:778970080
1222 1222 c, t dbSNP:144597856
1225 1225 a, g dbSNP:772125623
1231 1231 a, c dbSNP:376583398
1233 1233 c, g, t dbSNP:747105233
1234 1234 a, g dbSNP:201796232
1235 1235 c, g dbSNP:762626565
1236 1236 a, c dbSNP:768548528
1238 1238 a, g dbSNP:773864548
1240 1240 a, g dbSNP:147916084
1251 1251 c, g dbSNP:761628393
1256 1256 a, g dbSNP:767286477
1260 1260 c, t dbSNP:749892311
1261 1261 a, c, g, t dbSNP:186446705
1265 1265 c, t dbSNP:267603793
1278 1278 a, g dbSNP:754405433
1293 1293 g, t dbSNP:755275196
1301 1301 a, g dbSNP:111804506
1302 1302 c, t dbSNP:141637770
1305 1305 a, g dbSNP:752911625
1306 1306 a, g dbSNP:7334726
1308 1308 a, g dbSNP:777994039
1312 1312 c, t dbSNP:747051902
1313 1313 c, t dbSNP:373946311
1320 1320 c, g dbSNP:779835906
1326 1326 a, c dbSNP:749308962
1331 1331 c, t dbSNP:768334561
1352 1352 c, t dbSNP:774225871
1355 1355 a, g dbSNP:531499959
1369 1369 a, g, t dbSNP:771797869
1370 1370 c, t dbSNP:760229520
1374 1374 c, t dbSNP:138256149
1379 1379 g, t dbSNP:149222191
1384 1384 a, g dbSNP:377050034
1393 1393 c, t dbSNP:765667059
1394 1394 a, g dbSNP:143410332
1399 1399 a, g dbSNP:758795471
1407 1407 a, g dbSNP:777942743
1415 1415 c, t dbSNP:751829978
1425 1425 g, t dbSNP:534978633
1428 1428 a, g dbSNP:781403620
1444 1444 c, t dbSNP:778936453
1452 1452 g, t dbSNP:745943558
1453 1453 c, t dbSNP:768585316
1458 1458 a, g dbSNP:779011956
1461 1461 a, g dbSNP:747909163
1463 1463 a, g dbSNP:772029302
1468 1468 c, g dbSNP:376204257
1475 1475 c, g dbSNP:772974457
1477 1477 a, c dbSNP:8459
1482 1482 a, g dbSNP:771862796
1490 1490 a, c dbSNP:770341695
1496 1496 c, t dbSNP:7097
1540 1540 a, t dbSNP:553357664
1551 1551 c, t dbSNP:566833566
1559 1559 c, t dbSNP:138090002
1594 1594 a, c, g dbSNP:190867386
1608 1608 c, t dbSNP:116927792
1631 1631 c, t dbSNP:762950942
1632 1632 c, t dbSNP:766457613
1638 1638 a, t dbSNP:558455796

Target ORF information:

RefSeq Version XM_005266412
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens polymerase (RNA) I polypeptide D, 16kDa (POLR1D), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_005266412

ORF Insert Sequence:

1
61
121
181
241
301
361
ATGGAAGAGG ATCAGGAGCT GGAGAGAAAA ATATCTGGAT TGAAGACCTC AATGGCTGAA 
GGCGAGAGGA AGACAGCCCT GGAAATGGTC CAGGCAGCTG GAACAGATAG ACACTGTGTG
ACATTTGTAT TGCACGAGGA AGACCATACC CTAGGAAATT CTCTACGTTA CATGATCATG
AAGAACCCGG AAGTGGAATT TTGTGGTTAC ACTACGACCC ATCCTTCAGA GAGCAAAATT
AATTTACGCA TTCAGACTCG AGGTACCCTT CCAGCTGTTG AGCCATTTCA GAGAGGCCTG
AATGAGCTCA TGAATGTCTG CCAACATGTG CTTGACAAGT TTGAGGCCAG CATAAAGGAC
TATAAGGATC AAAAAGCAAG CAGAAATGAA TCCACATTCT AG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu16955
Accession Version XM_005266414.1
Sequence Information ORF Nucleotide Sequence (Length: 369bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector
Clone information Clone Map
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product DNA-directed RNA polymerases I and III subunit RPAC2 isoform X2
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_024524.15) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
ATGGAAGAGG ATCAGGAGCT GGAGAGGAAA GCAATAGAAG AACTGCTTAA GGAGGCAAAA 
CGTGGGAAAA CTAGAGCTGA AACAATGGGA CCCATGGGTT GGATGAAGTG TCCTCTTGCT
AGCACCAATA AAAGATTTCT AATTAACACA ATTAAAAACA CATTGCCCTC TCATAAAGAG
CAAGACCATG AACAAAAAGA GGGCGATAAG GAACCAGCGA AGAGCCAGGC CCAGAAAGAA
GAAAACCCGA AGAAACACAG AAGCCATCCT TACAAGCACA GCTTCCGCGC TCGAGGTTCC
GCCAGTTACT CCCCGCCACG AAAGCGGAGC AGCCAGGACA AGTACGAAAA GCGGTCCAAC
CGGCGGTGA
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeqXP_005266471.1
CDS1046..1414
Translation
Position Chain Variation Link
23 23 c, g dbSNP:760797855
28 28 a, c dbSNP:565382779
56 56 a, c dbSNP:534322007
57 57 c, t dbSNP:532090062
64 64 c, t dbSNP:554609543
92 92 c, t dbSNP:113269948
100 100 a, c dbSNP:543575845
156 156 a, g dbSNP:556906809
167 167 g, t dbSNP:764533253
170 170 g, t dbSNP:618733
170 170 -, t dbSNP:200073353
171 171 g, t dbSNP:552785988
181 181 c, t dbSNP:565278863
184 184 a, g dbSNP:527643108
205 205 a, g dbSNP:541079085
219 219 c, g dbSNP:762091793
237 237 c, g dbSNP:372393530
249 249 a, g dbSNP:2232664
250 250 a, g dbSNP:530162395
265 265 a, g dbSNP:550333029
277 277 c, g dbSNP:775987815
303 303 c, g dbSNP:747756670
306 306 a, c dbSNP:113482227
328 328 c, g dbSNP:570193651
348 348 a, c dbSNP:377175053
367 367 c, t dbSNP:145332007
378 378 a, g dbSNP:2232665
393 393 a, g dbSNP:763019403
414 414 -, a dbSNP:543438329
415 415 a, c dbSNP:754011357
416 416 a, g dbSNP:761896904
420 420 c, t dbSNP:2232669
437 437 c, t dbSNP:2232670
451 451 c, t dbSNP:2232671
452 452 a, g dbSNP:11617035
477 477 c, t dbSNP:754425143
488 488 a, g, t dbSNP:113015696
507 507 a, g dbSNP:758942763
631 631 a, g dbSNP:546026113
646 646 g, t dbSNP:2232672
683 683 c, t dbSNP:573193850
729 729 c, g dbSNP:564534097
750 750 c, t dbSNP:2232673
757 757 c, t dbSNP:2232674
773 773 a, c dbSNP:543598838
790 790 c, g dbSNP:569344015
811 811 c, t dbSNP:532529167
814 814 a, g dbSNP:2232675
815 815 a, g dbSNP:559591760
830 830 c, g dbSNP:528812810
864 864 a, g dbSNP:548156105
886 886 c, t dbSNP:12875930
897 897 c, t dbSNP:2232676
904 904 c, t dbSNP:12875939
922 922 c, t dbSNP:537150165
923 923 c, t dbSNP:550361170
934 934 c, t dbSNP:570575220
936 936 a, c dbSNP:2232677
938 938 a, c dbSNP:553230423
939 939 c, t dbSNP:2232678
950 950 a, c dbSNP:535423507
958 958 c, g dbSNP:2232679
972 972 c, t dbSNP:574695978
978 978 a, g dbSNP:543808650
983 983 c, g dbSNP:563407988
995 995 a, g dbSNP:576947862
996 996 c, g dbSNP:376899179
999 999 a, c, t dbSNP:749220350
1001 1001 a, c dbSNP:754787294
1003 1003 a, c dbSNP:778495401
1006 1006 c, t dbSNP:375008435
1007 1007 a, c, t dbSNP:752330161
1007 1007 -, c dbSNP:764374705
1012 1012 a, c dbSNP:545965891
1016 1016 c, g dbSNP:559557492
1019 1019 a, c dbSNP:200891022
1025 1025 a, g, t dbSNP:2232680
1030 1030 a, g, t dbSNP:746196920
1044 1044 c, t dbSNP:775835096
1045 1045 g, t dbSNP:763146884
1046 1046 a, g dbSNP:768779873
1051 1051 a, g, t dbSNP:376051642
1072 1072 a, g dbSNP:200478683
1074 1074 a, g dbSNP:748142776
1079 1079 a, g dbSNP:758252910
1081 1081 a, t dbSNP:777776296
1090 1090 a, g dbSNP:139003194
1106 1106 c, t dbSNP:770558990
1111 1111 a, g dbSNP:187533323
1120 1120 a, g dbSNP:745353709
1134 1134 g, t dbSNP:769345066
1145 1145 -, g dbSNP:36002780
1162 1162 c, t dbSNP:41291678
1191 1191 a, c dbSNP:777866161
1192 1192 c, t dbSNP:145936100
1196 1196 a, g dbSNP:769665364
1203 1203 a, c dbSNP:780876937
1206 1206 c, t dbSNP:377299762
1230 1230 a, t dbSNP:745567264
1233 1233 a, g dbSNP:769292014
1250 1250 a, g, t dbSNP:138599839
1254 1254 a, c dbSNP:572688780
1259 1259 c, t dbSNP:774756578
1264 1264 a, c, g dbSNP:11029
1267 1267 a, g dbSNP:773466756
1277 1277 a, c dbSNP:761043334
1292 1292 a, c dbSNP:766711201
1293 1293 c, t dbSNP:753910557
1294 1294 a, g dbSNP:14105
1297 1297 g, t dbSNP:200733557
1300 1300 a, g dbSNP:139130116
1301 1301 c, t dbSNP:543760382
1302 1302 a, g dbSNP:780917476
1303 1303 c, g dbSNP:149927279
1321 1321 c, g dbSNP:144175017
1323 1323 a, g dbSNP:118191175
1325 1325 a, g dbSNP:532679899
1326 1326 a, c, g dbSNP:565786176
1331 1331 c, t dbSNP:144660500
1332 1332 a, g dbSNP:768190130
1337 1337 c, g dbSNP:779448999
1340 1340 a, g dbSNP:748657620
1345 1345 a, c, t dbSNP:41291680
1346 1346 a, g, t dbSNP:773380196
1350 1350 -, t dbSNP:771323352
1350 1350 g, t dbSNP:200143431
1353 1353 a, c dbSNP:777024233
1354 1354 c, t dbSNP:370713004
1355 1355 c, t dbSNP:765291775
1359 1359 c, g dbSNP:751512677
1363 1363 a, c, g dbSNP:761590961
1365 1365 a, g dbSNP:750166122
1371 1371 a, g dbSNP:202004435
1373 1373 a, g dbSNP:779645216
1377 1377 c, g dbSNP:368524929
1380 1380 a, g dbSNP:142852632
1383 1383 a, g dbSNP:3742113
1391 1391 a, g, t dbSNP:778356800
1398 1398 c, g dbSNP:758774974
1399 1399 g, t dbSNP:75314566
1401 1401 a, c dbSNP:747337734
1406 1406 a, c dbSNP:141057739
1407 1407 a, g dbSNP:776979193
1409 1409 c, t dbSNP:201427232
1410 1410 c, g dbSNP:770058121
1412 1412 g, t dbSNP:201474841
1420 1420 a, c, g dbSNP:775372461
1433 1433 c, t dbSNP:767314108
1439 1439 c, t dbSNP:773170037
1445 1445 g, t dbSNP:760445177
1451 1451 a, g dbSNP:568728057
1456 1456 c, t dbSNP:530426478
1461 1461 -, gg dbSNP:772659247
1461 1461 a, c, g dbSNP:754522425
1461 1461 -, g dbSNP:557482249
1464 1464 a, c, g dbSNP:188886669
1466 1466 a, g dbSNP:757957762
1475 1475 a, g dbSNP:764415521
1561 1561 a, g dbSNP:570345582
1575 1575 -, a dbSNP:543960536
1601 1601 a, g dbSNP:17085862
1605 1605 a, g dbSNP:552628570
1606 1606 -, gg dbSNP:575575009
1640 1640 a, g dbSNP:181331406
1676 1676 g, t dbSNP:535239132
1693 1693 a, g dbSNP:367552487
1741 1741 c, g dbSNP:17085866
1744 1744 a, g dbSNP:745871311
1768 1768 a, g dbSNP:373822887
1780 1780 c, t dbSNP:575192284
1784 1784 c, t dbSNP:758236951
1802 1802 g, t dbSNP:537738736
1844 1844 c, t dbSNP:779521605
1874 1874 c, g dbSNP:17085868
1875 1875 a, g dbSNP:577146025
1933 1933 a, g dbSNP:374889440
1983 1983 c, t dbSNP:779945864
1988 1988 a, g dbSNP:561864229
2021 2021 c, t dbSNP:546297734
2034 2034 -, t dbSNP:34536885
2065 2065 a, t dbSNP:184883765
2096 2096 c, t dbSNP:3203071
2152 2152 a, c, g, t dbSNP:14144
2167 2167 a, g dbSNP:746665804
2193 2193 c, t dbSNP:768130152
2269 2269 c, t dbSNP:76546594
2271 2271 c, t dbSNP:41291682
2297 2297 a, g dbSNP:531279957
2317 2317 a, g dbSNP:550979413
2365 2365 a, g dbSNP:773498150
2385 2385 c, t dbSNP:11149483
2427 2427 a, g dbSNP:113777296
2447 2447 a, g dbSNP:9512781
2461 2461 -, ctcc dbSNP:141652077
2475 2475 g, t dbSNP:749233704
2479 2479 c, t dbSNP:144720546
2490 2490 c, t dbSNP:576767410
2494 2494 c, t dbSNP:566190239
2499 2499 a, g dbSNP:146681381
2535 2535 g, t dbSNP:14559
2564 2564 a, g dbSNP:77841090
2570 2570 a, g dbSNP:568942610
2585 2585 a, g dbSNP:189395988
2594 2594 c, t dbSNP:180957676
2611 2611 a, g dbSNP:9273
2647 2647 c, t dbSNP:539801023
2738 2738 a, c dbSNP:764360602
2749 2749 a, g dbSNP:775956693
2752 2752 c, t dbSNP:777024219
2755 2755 g, t dbSNP:115669672
2785 2785 c, t dbSNP:761952976
2796 2796 a, g dbSNP:185831294
2805 2805 a, t dbSNP:191139984
2807 2807 a, t dbSNP:367899589
2823 2823 a, c dbSNP:534587949
2826 2826 g, t dbSNP:536159124

Target ORF information:

RefSeq Version XM_005266414
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens polymerase (RNA) I polypeptide D, 16kDa (POLR1D), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_005266414

ORF Insert Sequence:

1
61
121
181
241
301
361
ATGGAAGAGG ATCAGGAGCT GGAGAGGAAA GCAATAGAAG AACTGCTTAA GGAGGCAAAA 
CGTGGGAAAA CTAGAGCTGA AACAATGGGA CCCATGGGTT GGATGAAGTG TCCTCTTGCT
AGCACCAATA AAAGATTTCT AATTAACACA ATTAAAAACA CATTGCCCTC TCATAAAGAG
CAAGACCATG AACAAAAAGA GGGCGATAAG GAACCAGCGA AGAGCCAGGC CCAGAAAGAA
GAAAACCCGA AGAAACACAG AAGCCATCCT TACAAGCACA GCTTCCGCGC TCGAGGTTCC
GCCAGTTACT CCCCGCCACG AAAGCGGAGC AGCCAGGACA AGTACGAAAA GCGGTCCAAC
CGGCGGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu16733
Accession Version NM_015972.3
Sequence Information ORF Nucleotide Sequence (Length: 402bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector
Clone information Clone Map
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 15-MAR-2015
Organism Homo sapiens (human)
Product DNA-directed RNA polymerases I and III subunit RPAC2 isoform 1
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DB455307.1, DB459107.1, BC000889.1 and BI253733.1. On Apr 28, 2011 this sequence version replaced gi:142366064. Summary: The protein encoded by this gene is a component of the RNA polymerase I and RNA polymerase III complexes, which function in the synthesis of ribosomal RNA precursors and small RNAs, respectively. Mutations in this gene are a cause of Treacher Collins syndrome (TCS), a craniofacial development disorder. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Apr 2011]. Transcript Variant: This variant (1) represents the shortest transcript but encodes the longest isoform (1). Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BI253733.1, DA734116.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
ATGGAAGAGG ATCAGGAGCT GGAGAGAAAA ATATCTGGAT TGAAGACCTC AATGGCTGAA 
GGCGAGAGGA AGACAGCCCT GGAAATGGTC CAGGCAGCTG GAACAGATAG ACACTGTGTG
ACATTTGTAT TGCACGAGGA AGACCATACC CTAGGAAATT CTCTACGTTA CATGATCATG
AAGAACCCGG AAGTGGAATT TTGTGGTTAC ACTACGACCC ATCCTTCAGA GAGCAAAATT
AATTTACGCA TTCAGACTCG AGGTACCCTT CCAGCTGTTG AGCCATTTCA GAGAGGCCTG
AATGAGCTCA TGAATGTCTG CCAACATGTG CTTGACAAGT TTGAGGCCAG CATAAAGGAC
TATAAGGATC AAAAAGCAAG CAGAAATGAA TCCACATTCT AG
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeqNP_057056.1
CDS206..607
Misc Feature(1)206..208(+)
Misc Feature(2)293..547(+)
Misc Feature(3)323..>415(+)
Misc Feature(4)335..541(+)
Misc Feature(5)350..430(+)
Misc Feature(6)371..430(+)
Misc Feature(7)401..403(+)
Exon (1)1..231
Gene:POLR1D
Gene Synonym:
Exon (2)232..810
Gene:POLR1D
Gene Synonym:
Translation
Position Chain Variation Link
24 24 a, g dbSNP:548156105
46 46 c, t dbSNP:12875930
57 57 c, t dbSNP:2232676
64 64 c, t dbSNP:12875939
82 82 c, t dbSNP:537150165
83 83 c, t dbSNP:550361170
94 94 c, t dbSNP:570575220
96 96 a, c dbSNP:2232677
98 98 a, c dbSNP:553230423
99 99 c, t dbSNP:2232678
110 110 a, c dbSNP:535423507
118 118 c, g dbSNP:2232679
132 132 c, t dbSNP:574695978
138 138 a, g dbSNP:543808650
143 143 c, g dbSNP:563407988
155 155 a, g dbSNP:576947862
156 156 c, g dbSNP:376899179
159 159 a, c, t dbSNP:749220350
161 161 a, c dbSNP:754787294
163 163 a, c dbSNP:778495401
166 166 c, t dbSNP:375008435
167 167 a, c, t dbSNP:752330161
167 167 -, c dbSNP:764374705
172 172 a, c dbSNP:545965891
176 176 c, g dbSNP:559557492
179 179 a, c dbSNP:200891022
185 185 a, g, t dbSNP:2232680
190 190 a, g, t dbSNP:746196920
204 204 c, t dbSNP:775835096
205 205 g, t dbSNP:763146884
206 206 a, g dbSNP:768779873
211 211 a, g, t dbSNP:376051642
247 247 -, gaa dbSNP:752153066
259 259 c, g dbSNP:529013502
262 262 g, t dbSNP:776525888
266 266 a, g dbSNP:759527489
269 269 a, g dbSNP:765011144
271 271 a, g dbSNP:151041219
279 279 c, t dbSNP:777412814
283 283 c, t dbSNP:372189960
284 284 c, t dbSNP:763616303
302 302 c, g dbSNP:751267443
311 311 a, g dbSNP:756808529
344 344 a, g dbSNP:767196650
349 349 c, t dbSNP:750965300
355 355 c, g dbSNP:756626537
365 365 g, t dbSNP:142365486
366 366 c, g dbSNP:749563986
370 370 a, g dbSNP:755398859
377 377 a, c dbSNP:778970080
382 382 c, t dbSNP:144597856
385 385 a, g dbSNP:772125623
391 391 a, c dbSNP:376583398
393 393 c, g, t dbSNP:747105233
394 394 a, g dbSNP:201796232
395 395 c, g dbSNP:762626565
396 396 a, c dbSNP:768548528
398 398 a, g dbSNP:773864548
400 400 a, g dbSNP:147916084
411 411 c, g dbSNP:761628393
416 416 a, g dbSNP:767286477
420 420 c, t dbSNP:749892311
421 421 a, c, g, t dbSNP:186446705
425 425 c, t dbSNP:267603793
438 438 a, g dbSNP:754405433
453 453 g, t dbSNP:755275196
461 461 a, g dbSNP:111804506
462 462 c, t dbSNP:141637770
465 465 a, g dbSNP:752911625
466 466 a, g dbSNP:7334726
468 468 a, g dbSNP:777994039
472 472 c, t dbSNP:747051902
473 473 c, t dbSNP:373946311
480 480 c, g dbSNP:779835906
486 486 a, c dbSNP:749308962
491 491 c, t dbSNP:768334561
512 512 c, t dbSNP:774225871
515 515 a, g dbSNP:531499959
529 529 a, g, t dbSNP:771797869
530 530 c, t dbSNP:760229520
534 534 c, t dbSNP:138256149
539 539 g, t dbSNP:149222191
544 544 a, g dbSNP:377050034
553 553 c, t dbSNP:765667059
554 554 a, g dbSNP:143410332
559 559 a, g dbSNP:758795471
567 567 a, g dbSNP:777942743
575 575 c, t dbSNP:751829978
585 585 g, t dbSNP:534978633
588 588 a, g dbSNP:781403620
604 604 c, t dbSNP:778936453
612 612 g, t dbSNP:745943558
613 613 c, t dbSNP:768585316
618 618 a, g dbSNP:779011956
621 621 a, g dbSNP:747909163
623 623 a, g dbSNP:772029302
628 628 c, g dbSNP:376204257
635 635 c, g dbSNP:772974457
637 637 a, c dbSNP:8459
642 642 a, g dbSNP:771862796
650 650 a, c dbSNP:770341695
656 656 c, t dbSNP:7097
700 700 a, t dbSNP:553357664
711 711 c, t dbSNP:566833566
719 719 c, t dbSNP:138090002
754 754 a, c, g dbSNP:190867386
768 768 c, t dbSNP:116927792
791 791 c, t dbSNP:762950942
792 792 c, t dbSNP:766457613
798 798 a, t dbSNP:558455796

Target ORF information:

RefSeq Version NM_015972
Organism Homo sapiens (human)
Definition Homo sapiens polymerase (RNA) I polypeptide D, 16kDa (POLR1D), transcript variant 1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_015972

ORF Insert Sequence:

1
61
121
181
241
301
361
ATGGAAGAGG ATCAGGAGCT GGAGAGAAAA ATATCTGGAT TGAAGACCTC AATGGCTGAA 
GGCGAGAGGA AGACAGCCCT GGAAATGGTC CAGGCAGCTG GAACAGATAG ACACTGTGTG
ACATTTGTAT TGCACGAGGA AGACCATACC CTAGGAAATT CTCTACGTTA CATGATCATG
AAGAACCCGG AAGTGGAATT TTGTGGTTAC ACTACGACCC ATCCTTCAGA GAGCAAAATT
AATTTACGCA TTCAGACTCG AGGTACCCTT CCAGCTGTTG AGCCATTTCA GAGAGGCCTG
AATGAGCTCA TGAATGTCTG CCAACATGTG CTTGACAAGT TTGAGGCCAG CATAAAGGAC
TATAAGGATC AAAAAGCAAG CAGAAATGAA TCCACATTCT AG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu16955
Accession Version NM_152705.2
Sequence Information ORF Nucleotide Sequence (Length: 369bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector
Clone information Clone Map
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 15-MAR-2015
Organism Homo sapiens (human)
Product DNA-directed RNA polymerases I and III subunit RPAC2 isoform 2
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DB455307.1, DB459107.1, BC015319.2, BQ004736.1 and DB518623.1. On Apr 28, 2011 this sequence version replaced gi:22749406. Summary: The protein encoded by this gene is a component of the RNA polymerase I and RNA polymerase III complexes, which function in the synthesis of ribosomal RNA precursors and small RNAs, respectively. Mutations in this gene are a cause of Treacher Collins syndrome (TCS), a craniofacial development disorder. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Apr 2011]. Transcript Variant: This variant (2) differs in the 3' coding region and 3' UTR, compared to variant 1. The encoded isoform (2) has a distinct and shorter C-terminus, compared to isoform 1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: DB455307.1, BC018528.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
ATGGAAGAGG ATCAGGAGCT GGAGAGGAAA GCAATAGAAG AACTGCTTAA GGAGGCAAAA 
CGTGGGAAAA CTAGAGCTGA AACAATGGGA CCCATGGGTT GGATGAAGTG TCCTCTTGCT
AGCACCAATA AAAGATTTCT AATTAACACA ATTAAAAACA CATTGCCCTC TCATAAAGAG
CAAGACCATG AACAAAAAGA GGGCGATAAG GAACCAGCGA AGAGCCAGGC CCAGAAAGAA
GAAAACCCGA AGAAACACAG AAGCCATCCT TACAAGCACA GCTTCCGCGC TCGAGGTTCC
GCCAGTTACT CCCCGCCACG AAAGCGGAGC AGCCAGGACA AGTACGAAAA GCGGTCCAAC
CGGCGGTGA
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeqNP_689918.1
CDS206..574
Exon (1)1..231
Gene:POLR1D
Gene Synonym:
Exon (2)232..306
Gene:POLR1D
Gene Synonym:
Exon (3)307..2043
Gene:POLR1D
Gene Synonym:
Translation
Position Chain Variation Link
24 24 a, g dbSNP:548156105
46 46 c, t dbSNP:12875930
57 57 c, t dbSNP:2232676
64 64 c, t dbSNP:12875939
82 82 c, t dbSNP:537150165
83 83 c, t dbSNP:550361170
94 94 c, t dbSNP:570575220
96 96 a, c dbSNP:2232677
98 98 a, c dbSNP:553230423
99 99 c, t dbSNP:2232678
110 110 a, c dbSNP:535423507
118 118 c, g dbSNP:2232679
132 132 c, t dbSNP:574695978
138 138 a, g dbSNP:543808650
143 143 c, g dbSNP:563407988
155 155 a, g dbSNP:576947862
156 156 c, g dbSNP:376899179
159 159 a, c, t dbSNP:749220350
161 161 a, c dbSNP:754787294
163 163 a, c dbSNP:778495401
166 166 c, t dbSNP:375008435
167 167 a, c, t dbSNP:752330161
167 167 -, c dbSNP:764374705
172 172 a, c dbSNP:545965891
176 176 c, g dbSNP:559557492
179 179 a, c dbSNP:200891022
185 185 a, g, t dbSNP:2232680
190 190 a, g, t dbSNP:746196920
204 204 c, t dbSNP:775835096
205 205 g, t dbSNP:763146884
206 206 a, g dbSNP:768779873
211 211 a, g, t dbSNP:376051642
232 232 a, g dbSNP:200478683
234 234 a, g dbSNP:748142776
239 239 a, g dbSNP:758252910
241 241 a, t dbSNP:777776296
250 250 a, g dbSNP:139003194
266 266 c, t dbSNP:770558990
271 271 a, g dbSNP:187533323
280 280 a, g dbSNP:745353709
294 294 g, t dbSNP:769345066
305 305 -, g dbSNP:36002780
322 322 c, t dbSNP:41291678
351 351 a, c dbSNP:777866161
352 352 c, t dbSNP:145936100
356 356 a, g dbSNP:769665364
363 363 a, c dbSNP:780876937
366 366 c, t dbSNP:377299762
390 390 a, t dbSNP:745567264
393 393 a, g dbSNP:769292014
410 410 a, g, t dbSNP:138599839
414 414 a, c dbSNP:572688780
419 419 c, t dbSNP:774756578
424 424 a, c, g dbSNP:11029
427 427 a, g dbSNP:773466756
437 437 a, c dbSNP:761043334
452 452 a, c dbSNP:766711201
453 453 c, t dbSNP:753910557
454 454 a, g dbSNP:14105
457 457 g, t dbSNP:200733557
460 460 a, g dbSNP:139130116
461 461 c, t dbSNP:543760382
462 462 a, g dbSNP:780917476
463 463 c, g dbSNP:149927279
481 481 c, g dbSNP:144175017
483 483 a, g dbSNP:118191175
485 485 a, g dbSNP:532679899
486 486 a, c, g dbSNP:565786176
491 491 c, t dbSNP:144660500
492 492 a, g dbSNP:768190130
497 497 c, g dbSNP:779448999
500 500 a, g dbSNP:748657620
505 505 a, c, t dbSNP:41291680
506 506 a, g, t dbSNP:773380196
510 510 -, t dbSNP:771323352
510 510 g, t dbSNP:200143431
513 513 a, c dbSNP:777024233
514 514 c, t dbSNP:370713004
515 515 c, t dbSNP:765291775
519 519 c, g dbSNP:751512677
523 523 a, c, g dbSNP:761590961
525 525 a, g dbSNP:750166122
531 531 a, g dbSNP:202004435
533 533 a, g dbSNP:779645216
537 537 c, g dbSNP:368524929
540 540 a, g dbSNP:142852632
543 543 a, g dbSNP:3742113
551 551 a, g, t dbSNP:778356800
558 558 c, g dbSNP:758774974
559 559 g, t dbSNP:75314566
561 561 a, c dbSNP:747337734
566 566 a, c dbSNP:141057739
567 567 a, g dbSNP:776979193
569 569 c, t dbSNP:201427232
570 570 c, g dbSNP:770058121
572 572 g, t dbSNP:201474841
580 580 a, c, g dbSNP:775372461
593 593 c, t dbSNP:767314108
599 599 c, t dbSNP:773170037
605 605 g, t dbSNP:760445177
611 611 a, g dbSNP:568728057
616 616 c, t dbSNP:530426478
621 621 -, gg dbSNP:772659247
621 621 a, c, g dbSNP:754522425
621 621 -, g dbSNP:557482249
624 624 a, c, g dbSNP:188886669
626 626 a, g dbSNP:757957762
635 635 a, g dbSNP:764415521
721 721 a, g dbSNP:570345582
735 735 -, a dbSNP:543960536
761 761 a, g dbSNP:17085862
765 765 a, g dbSNP:552628570
766 766 -, gg dbSNP:575575009
800 800 a, g dbSNP:181331406
836 836 g, t dbSNP:535239132
853 853 a, g dbSNP:367552487
901 901 c, g dbSNP:17085866
904 904 a, g dbSNP:745871311
928 928 a, g dbSNP:373822887
940 940 c, t dbSNP:575192284
944 944 c, t dbSNP:758236951
962 962 g, t dbSNP:537738736
1004 1004 c, t dbSNP:779521605
1034 1034 c, g dbSNP:17085868
1035 1035 a, g dbSNP:577146025
1093 1093 a, g dbSNP:374889440
1143 1143 c, t dbSNP:779945864
1148 1148 a, g dbSNP:561864229
1181 1181 c, t dbSNP:546297734
1194 1194 -, t dbSNP:34536885
1225 1225 a, t dbSNP:184883765
1256 1256 c, t dbSNP:3203071
1312 1312 a, c, g, t dbSNP:14144
1327 1327 a, g dbSNP:746665804
1353 1353 c, t dbSNP:768130152
1429 1429 c, t dbSNP:76546594
1431 1431 c, t dbSNP:41291682
1457 1457 a, g dbSNP:531279957
1477 1477 a, g dbSNP:550979413
1525 1525 a, g dbSNP:773498150
1545 1545 c, t dbSNP:11149483
1587 1587 a, g dbSNP:113777296
1607 1607 a, g dbSNP:9512781
1621 1621 -, ctcc dbSNP:141652077
1635 1635 g, t dbSNP:749233704
1639 1639 c, t dbSNP:144720546
1650 1650 c, t dbSNP:576767410
1654 1654 c, t dbSNP:566190239
1659 1659 a, g dbSNP:146681381
1695 1695 g, t dbSNP:14559
1724 1724 a, g dbSNP:77841090
1730 1730 a, g dbSNP:568942610
1745 1745 a, g dbSNP:189395988
1754 1754 c, t dbSNP:180957676
1771 1771 a, g dbSNP:9273
1807 1807 c, t dbSNP:539801023
1898 1898 a, c dbSNP:764360602
1909 1909 a, g dbSNP:775956693
1912 1912 c, t dbSNP:777024219
1915 1915 g, t dbSNP:115669672
1945 1945 c, t dbSNP:761952976
1956 1956 a, g dbSNP:185831294
1965 1965 a, t dbSNP:191139984
1967 1967 a, t dbSNP:367899589
1983 1983 a, c dbSNP:534587949
1986 1986 g, t dbSNP:536159124

Target ORF information:

RefSeq Version NM_152705
Organism Homo sapiens (human)
Definition Homo sapiens polymerase (RNA) I polypeptide D, 16kDa (POLR1D), transcript variant 2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_152705

ORF Insert Sequence:

1
61
121
181
241
301
361
ATGGAAGAGG ATCAGGAGCT GGAGAGGAAA GCAATAGAAG AACTGCTTAA GGAGGCAAAA 
CGTGGGAAAA CTAGAGCTGA AACAATGGGA CCCATGGGTT GGATGAAGTG TCCTCTTGCT
AGCACCAATA AAAGATTTCT AATTAACACA ATTAAAAACA CATTGCCCTC TCATAAAGAG
CAAGACCATG AACAAAAAGA GGGCGATAAG GAACCAGCGA AGAGCCAGGC CCAGAAAGAA
GAAAACCCGA AGAAACACAG AAGCCATCCT TACAAGCACA GCTTCCGCGC TCGAGGTTCC
GCCAGTTACT CCCCGCCACG AAAGCGGAGC AGCCAGGACA AGTACGAAAA GCGGTCCAAC
CGGCGGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu18322
Accession Version NM_001206559.1
Sequence Information ORF Nucleotide Sequence (Length: 285bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector
Clone information Clone Map
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 15-MAR-2015
Organism Homo sapiens (human)
Product DNA-directed RNA polymerases I and III subunit RPAC2 isoform 3
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DB123903.1, DR156229.1, AK307356.1, BC015319.2, BQ004736.1 and DB518623.1. This sequence is a reference standard in the RefSeqGene project. Summary: The protein encoded by this gene is a component of the RNA polymerase I and RNA polymerase III complexes, which function in the synthesis of ribosomal RNA precursors and small RNAs, respectively. Mutations in this gene are a cause of Treacher Collins syndrome (TCS), a craniofacial development disorder. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Apr 2011]. Transcript Variant: This variant (3) differs in both UTRs and in the coding region, compared to variant 1. The encoded isoform (3) shares identity with isoform 2 but is distinct and shorter, compared to isoform 1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AK307356.1, DB005195.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1968540 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
ATGGGACCCA TGGGTTGGAT GAAGTGTCCT CTTGCTAGCA CCAATAAAAG ATTTCTAATT 
AACACAATTA AAAACACATT GCCCTCTCAT AAAGAGCAAG ACCATGAACA AAAAGAGGGC
GATAAGGAAC CAGCGAAGAG CCAGGCCCAG AAAGAAGAAA ACCCGAAGAA ACACAGAAGC
CATCCTTACA AGCACAGCTT CCGCGCTCGA GGTTCCGCCA GTTACTCCCC GCCACGAAAG
CGGAGCAGCC AGGACAAGTA CGAAAAGCGG TCCAACCGGC GGTGA
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeqNP_001193488.1
CDS457..741
Misc Feature(1)298..300(+)
Misc Feature(2)628..>705(+)
Exon (1)1..398
Gene:POLR1D
Gene Synonym:
Exon (2)399..473
Gene:POLR1D
Gene Synonym:
Exon (3)474..2210
Gene:POLR1D
Gene Synonym:
Translation
Position Chain Variation Link
23 23 c, g dbSNP:760797855
28 28 a, c dbSNP:565382779
56 56 a, c dbSNP:534322007
57 57 c, t dbSNP:532090062
64 64 c, t dbSNP:554609543
92 92 c, t dbSNP:113269948
100 100 a, c dbSNP:543575845
156 156 a, g dbSNP:556906809
167 167 g, t dbSNP:764533253
170 170 g, t dbSNP:618733
170 170 -, t dbSNP:200073353
171 171 g, t dbSNP:552785988
181 181 c, t dbSNP:565278863
184 184 a, g dbSNP:527643108
205 205 a, g dbSNP:541079085
219 219 c, g dbSNP:762091793
237 237 c, g dbSNP:372393530
249 249 a, g dbSNP:2232664
250 250 a, g dbSNP:530162395
265 265 a, g dbSNP:550333029
277 277 c, g dbSNP:775987815
303 303 c, g dbSNP:747756670
306 306 a, c dbSNP:113482227
328 328 c, g dbSNP:570193651
348 348 a, c dbSNP:377175053
367 367 c, t dbSNP:145332007
378 378 a, g dbSNP:2232665
393 393 a, g dbSNP:763019403
399 399 a, g dbSNP:200478683
401 401 a, g dbSNP:748142776
406 406 a, g dbSNP:758252910
408 408 a, t dbSNP:777776296
417 417 a, g dbSNP:139003194
433 433 c, t dbSNP:770558990
438 438 a, g dbSNP:187533323
447 447 a, g dbSNP:745353709
461 461 g, t dbSNP:769345066
472 472 -, g dbSNP:36002780
489 489 c, t dbSNP:41291678
518 518 a, c dbSNP:777866161
519 519 c, t dbSNP:145936100
523 523 a, g dbSNP:769665364
530 530 a, c dbSNP:780876937
533 533 c, t dbSNP:377299762
557 557 a, t dbSNP:745567264
560 560 a, g dbSNP:769292014
577 577 a, g, t dbSNP:138599839
581 581 a, c dbSNP:572688780
586 586 c, t dbSNP:774756578
591 591 a, c, g dbSNP:11029
594 594 a, g dbSNP:773466756
604 604 a, c dbSNP:761043334
619 619 a, c dbSNP:766711201
620 620 c, t dbSNP:753910557
621 621 a, g dbSNP:14105
624 624 g, t dbSNP:200733557
627 627 a, g dbSNP:139130116
628 628 c, t dbSNP:543760382
629 629 a, g dbSNP:780917476
630 630 c, g dbSNP:149927279
648 648 c, g dbSNP:144175017
650 650 a, g dbSNP:118191175
652 652 a, g dbSNP:532679899
653 653 a, c, g dbSNP:565786176
658 658 c, t dbSNP:144660500
659 659 a, g dbSNP:768190130
664 664 c, g dbSNP:779448999
667 667 a, g dbSNP:748657620
672 672 a, c, t dbSNP:41291680
673 673 a, g, t dbSNP:773380196
677 677 -, t dbSNP:771323352
677 677 g, t dbSNP:200143431
680 680 a, c dbSNP:777024233
681 681 c, t dbSNP:370713004
682 682 c, t dbSNP:765291775
686 686 c, g dbSNP:751512677
690 690 a, c, g dbSNP:761590961
692 692 a, g dbSNP:750166122
698 698 a, g dbSNP:202004435
700 700 a, g dbSNP:779645216
704 704 c, g dbSNP:368524929
707 707 a, g dbSNP:142852632
710 710 a, g dbSNP:3742113
718 718 a, g, t dbSNP:778356800
725 725 c, g dbSNP:758774974
726 726 g, t dbSNP:75314566
728 728 a, c dbSNP:747337734
733 733 a, c dbSNP:141057739
734 734 a, g dbSNP:776979193
736 736 c, t dbSNP:201427232
737 737 c, g dbSNP:770058121
739 739 g, t dbSNP:201474841
747 747 a, c, g dbSNP:775372461
760 760 c, t dbSNP:767314108
766 766 c, t dbSNP:773170037
772 772 g, t dbSNP:760445177
778 778 a, g dbSNP:568728057
783 783 c, t dbSNP:530426478
788 788 -, gg dbSNP:772659247
788 788 a, c, g dbSNP:754522425
788 788 -, g dbSNP:557482249
791 791 a, c, g dbSNP:188886669
793 793 a, g dbSNP:757957762
802 802 a, g dbSNP:764415521
888 888 a, g dbSNP:570345582
902 902 -, a dbSNP:543960536
928 928 a, g dbSNP:17085862
932 932 a, g dbSNP:552628570
933 933 -, gg dbSNP:575575009
967 967 a, g dbSNP:181331406
1003 1003 g, t dbSNP:535239132
1020 1020 a, g dbSNP:367552487
1068 1068 c, g dbSNP:17085866
1071 1071 a, g dbSNP:745871311
1095 1095 a, g dbSNP:373822887
1107 1107 c, t dbSNP:575192284
1111 1111 c, t dbSNP:758236951
1129 1129 g, t dbSNP:537738736
1171 1171 c, t dbSNP:779521605
1201 1201 c, g dbSNP:17085868
1202 1202 a, g dbSNP:577146025
1260 1260 a, g dbSNP:374889440
1310 1310 c, t dbSNP:779945864
1315 1315 a, g dbSNP:561864229
1348 1348 c, t dbSNP:546297734
1361 1361 -, t dbSNP:34536885
1392 1392 a, t dbSNP:184883765
1423 1423 c, t dbSNP:3203071
1479 1479 a, c, g, t dbSNP:14144
1494 1494 a, g dbSNP:746665804
1520 1520 c, t dbSNP:768130152
1596 1596 c, t dbSNP:76546594
1598 1598 c, t dbSNP:41291682
1624 1624 a, g dbSNP:531279957
1644 1644 a, g dbSNP:550979413
1692 1692 a, g dbSNP:773498150
1712 1712 c, t dbSNP:11149483
1754 1754 a, g dbSNP:113777296
1774 1774 a, g dbSNP:9512781
1788 1788 -, ctcc dbSNP:141652077
1802 1802 g, t dbSNP:749233704
1806 1806 c, t dbSNP:144720546
1817 1817 c, t dbSNP:576767410
1821 1821 c, t dbSNP:566190239
1826 1826 a, g dbSNP:146681381
1862 1862 g, t dbSNP:14559
1891 1891 a, g dbSNP:77841090
1897 1897 a, g dbSNP:568942610
1912 1912 a, g dbSNP:189395988
1921 1921 c, t dbSNP:180957676
1938 1938 a, g dbSNP:9273
1974 1974 c, t dbSNP:539801023
2065 2065 a, c dbSNP:764360602
2076 2076 a, g dbSNP:775956693
2079 2079 c, t dbSNP:777024219
2082 2082 g, t dbSNP:115669672
2112 2112 c, t dbSNP:761952976
2123 2123 a, g dbSNP:185831294
2132 2132 a, t dbSNP:191139984
2134 2134 a, t dbSNP:367899589
2150 2150 a, c dbSNP:534587949
2153 2153 g, t dbSNP:536159124

Target ORF information:

RefSeq Version NM_001206559
Organism Homo sapiens (human)
Definition Homo sapiens polymerase (RNA) I polypeptide D, 16kDa (POLR1D), transcript variant 3, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_001206559

ORF Insert Sequence:

1
61
121
181
241
ATGGGACCCA TGGGTTGGAT GAAGTGTCCT CTTGCTAGCA CCAATAAAAG ATTTCTAATT 
AACACAATTA AAAACACATT GCCCTCTCAT AAAGAGCAAG ACCATGAACA AAAAGAGGGC
GATAAGGAAC CAGCGAAGAG CCAGGCCCAG AAAGAAGAAA ACCCGAAGAA ACACAGAAGC
CATCCTTACA AGCACAGCTT CCGCGCTCGA GGTTCCGCCA GTTACTCCCC GCCACGAAAG
CGGAGCAGCC AGGACAAGTA CGAAAAGCGG TCCAACCGGC GGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.