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RARA retinoic acid receptor, alpha [Homo sapiens (human)]

Gene Symbol RARA
Entrez Gene ID 5914
Full Name retinoic acid receptor, alpha
Synonyms NR1B1, RAR
General protein information
Preferred Names
retinoic acid receptor alpha
Names
retinoic acid receptor alpha
RAR-alpha
retinoic acid receptor, alpha polypeptide
nuclear receptor subfamily 1 group B member 1
retinoic acid nuclear receptor alpha variant 1
retinoic acid nuclear receptor alpha variant 2
nucleophosmin-retinoic acid receptor alpha fusion protein NPM-RAR long form
Gene Type protein-coding
Organism Homo sapiens (human)
Genome

17

17q21

Summary This gene represents a nuclear retinoic acid receptor. The encoded protein, retinoic acid receptor alpha, regulates transcription in a ligand-dependent manner. This gene has been implicated in regulation of development, differentiation, apoptosis, granulopoeisis, and transcription of clock genes. Translocations between this locus and several other loci have been associated with acute promyelocytic leukemia. Alternatively spliced transcript variants have been found for this locus.[provided by RefSeq, Sep 2010]. lac of sum
Disorder MIM:

180240

Disorder Html: Leukemia, acute promyelocytic, 612376 (1)





The following RARA gene sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the RARA gene which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

CloneID RefSeq Accession Definition **Vector *Turnaround time Price Select
OHu26893 XM_005257554 PREDICTED: Homo sapiens retinoic acid receptor, alpha (RARA), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector
in pcDNA3.1+/C-(K)DYK
$319
OHu26893 XM_011525095 PREDICTED: Homo sapiens retinoic acid receptor, alpha (RARA), transcript variant X2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector
in pcDNA3.1+/C-(K)DYK
$319
OHu26893 XM_005257553 PREDICTED: Homo sapiens retinoic acid receptor, alpha (RARA), transcript variant X3, mRNA. pcDNA3.1+/C-(K)DYK or customized vector
in pcDNA3.1+/C-(K)DYK
$319
OHu60195 XM_011525096 PREDICTED: Homo sapiens retinoic acid receptor, alpha (RARA), transcript variant X4, mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $319
OHu50570 XM_005257552 PREDICTED: Homo sapiens retinoic acid receptor, alpha (RARA), transcript variant X5, mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $319
OHu21799 NM_001024809 Homo sapiens retinoic acid receptor, alpha (RARA), transcript variant 2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector
in pcDNA3.1+/C-(K)DYK
$379
OHu26893 NM_001145301 Homo sapiens retinoic acid receptor, alpha (RARA), transcript variant 3, mRNA. pcDNA3.1+/C-(K)DYK or customized vector
in pcDNA3.1+/C-(K)DYK
$379
OHu26893 NM_000964 Homo sapiens retinoic acid receptor, alpha (RARA), transcript variant 1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector
in pcDNA3.1+/C-(K)DYK
$379
OHu20979 NM_001145302 Homo sapiens retinoic acid receptor, alpha (RARA), transcript variant 4, mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $309

*Business Day
**You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.


CloneID OHu26893
Accession Version XM_005257554.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1389bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector Document: User manual_GenEZ ORF Clone Products.pdf (pdf)
Clone information Clone Map
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags Document: MSDS_GenEZ ORF Clone Products.pdf (pdf)
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear Document: OHu26893D_COA.pdf (pdf)
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product retinoic acid receptor alpha isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_010783.16) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGCCAGCA ACAGCAGCTC CTGCCCGACA CCTGGGGGCG GGCACCTCAA TGGGTACCCG 
GTGCCTCCCT ACGCCTTCTT CTTCCCCCCT ATGCTGGGTG GACTCTCCCC GCCAGGCGCT
CTGACCACTC TCCAGCACCA GCTTCCAGTT AGTGGATATA GCACACCATC CCCAGCCACC
ATTGAGACCC AGAGCAGCAG TTCTGAAGAG ATAGTGCCCA GCCCTCCCTC GCCACCCCCT
CTACCCCGCA TCTACAAGCC TTGCTTTGTC TGTCAGGACA AGTCCTCAGG CTACCACTAT
GGGGTCAGCG CCTGTGAGGG CTGCAAGGGC TTCTTCCGCC GCAGCATCCA GAAGAACATG
GTGTACACGT GTCACCGGGA CAAGAACTGC ATCATCAACA AGGTGACCCG GAACCGCTGC
CAGTACTGCC GACTGCAGAA GTGCTTTGAA GTGGGCATGT CCAAGGAGTC TGTGAGAAAC
GACCGAAACA AGAAGAAGAA GGAGGTGCCC AAGCCCGAGT GCTCTGAGAG CTACACGCTG
ACGCCGGAGG TGGGGGAGCT CATTGAGAAG GTGCGCAAAG CGCACCAGGA AACCTTCCCT
GCCCTCTGCC AGCTGGGCAA ATACACTACG AACAACAGCT CAGAACAACG TGTCTCTCTG
GACATTGACC TCTGGGACAA GTTCAGTGAA CTCTCCACCA AGTGCATCAT TAAGACTGTG
GAGTTCGCCA AGCAGCTGCC CGGCTTCACC ACCCTCACCA TCGCCGACCA GATCACCCTC
CTCAAGGCTG CCTGCCTGGA CATCCTGATC CTGCGGATCT GCACGCGGTA CACGCCCGAG
CAGGACACCA TGACCTTCTC GGACGGGCTG ACCCTGAACC GGACCCAGAT GCACAACGCT
GGCTTCGGCC CCCTCACCGA CCTGGTCTTT GCCTTCGCCA ACCAGCTGCT GCCCCTGGAG
ATGGATGATG CGGAGACGGG GCTGCTCAGC GCCATCTGCC TCATCTGCGG AGACCGCCAG
GACCTGGAGC AGCCGGACCG GGTGGACATG CTGCAGGAGC CGCTGCTGGA GGCGCTAAAG
GTCTACGTGC GGAAGCGGAG GCCCAGCCGC CCCCACATGT TCCCCAAGAT GCTAATGAAG
ATTACTGACC TGCGAAGCAT CAGCGCCAAG GGGGCTGAGC GGGTGATCAC GCTGAAGATG
GAGATCCCGG GCTCCATGCC GCCTCTCATC CAGGAAATGT TGGAGAACTC AGAGGGCCTG
GACACTCTGA GCGGACAGCC GGGGGGTGGG GGGCGGGACG GGGGTGGCCT GGCCCCCCCG
CCAGGCAGCT GTAGCCCCAG CCTCAGCCCC AGCTCCAACA GAAGCAGCCC GGCCACCCAC
TCCCCGTGA
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeqXP_005257611.1
CDS632..2020
Misc Feature(1)686..>835(+)
Misc Feature(2)875..1129(+)
Misc Feature(3)893..1060(+)
Misc Feature(4)923..1108(+)
Misc Feature(5)1034..1054(+)
Misc Feature(6)1187..1879(+)
Misc Feature(7)1313..1873(+)
Misc Feature(8)1349..1870(+)
Misc Feature(9)1574..1789(+)
Translation
Position Chain Variation Link
7 7 a, g dbSNP:570934288
24 24 a, c dbSNP:74757201
25 25 a, g, t dbSNP:80181302
29 29 a, g dbSNP:771387955
50 50 c, t dbSNP:780386430
59 59 g, t dbSNP:751663251
208 208 c, t dbSNP:533906369
229 229 c, t dbSNP:556046155
236 236 a, g dbSNP:116682671
240 240 c, g dbSNP:544874441
256 256 a, g dbSNP:556836727
305 305 g, t dbSNP:550692831
346 346 c, t dbSNP:143366253
376 376 a, g dbSNP:535249147
382 382 c, t dbSNP:765127095
404 404 c, t dbSNP:539890007
471 471 g, t dbSNP:551496545
480 480 c, g dbSNP:566814220
499 499 a, t dbSNP:769075062
500 500 a, g dbSNP:534271469
547 547 a, c dbSNP:182564001
578 578 a, c dbSNP:574319362
581 581 -, ag dbSNP:773082864
586 586 c, t dbSNP:200235947
602 602 c, g dbSNP:748177728
604 604 g, t dbSNP:144842676
606 606 c, t dbSNP:778106143
608 608 c, g dbSNP:374636114
613 613 -, ctga dbSNP:755958399
624 624 c, t dbSNP:575427178
640 640 c, t dbSNP:545841176
641 641 a, c dbSNP:759886628
649 649 c, t dbSNP:770268838
651 651 -, cctgc dbSNP:777315412
651 651 c, g dbSNP:150291626
657 657 c, t dbSNP:762408148
658 658 a, g dbSNP:563927918
665 665 -, g dbSNP:748767479
666 666 c, g dbSNP:137929765
669 669 a, g dbSNP:761512575
670 670 c, t dbSNP:767138451
674 674 c, t dbSNP:750162967
681 681 a, g dbSNP:368040095
689 689 c, g dbSNP:201015843
690 690 c, t dbSNP:773378786
691 691 a, c, g dbSNP:753861488
703 703 c, t dbSNP:148576098
704 704 a, g, t dbSNP:371882393
706 706 c, t dbSNP:781275602
709 709 a, c dbSNP:746187167
721 721 c, t dbSNP:770175416
725 725 a, c, t dbSNP:775872347
730 730 g, t dbSNP:769208251
741 741 c, t dbSNP:561629991
742 742 a, g dbSNP:376736940
748 748 c, t dbSNP:767135725
749 749 a, c, g, t dbSNP:576185106
751 751 c, t dbSNP:766250061
752 752 c, g, t dbSNP:138781565
759 759 c, g dbSNP:116538651
769 769 a, c dbSNP:562304039
770 770 c, t dbSNP:757297600
786 786 a, g dbSNP:781428265
789 789 -, tagcacacc dbSNP:770639799
790 790 c, t dbSNP:746045441
794 794 a, c dbSNP:756376800
795 795 c, t dbSNP:780381092
796 796 a, c dbSNP:749718384
800 800 c, t dbSNP:200014376
806 806 g, t dbSNP:774732066
815 815 a, g dbSNP:753325918
843 843 c, t dbSNP:533798657
862 862 a, g dbSNP:2229771
866 866 c, g dbSNP:752378107
868 868 c, t dbSNP:758087141
869 869 c, g dbSNP:777603974
879 879 a, g dbSNP:751370458
880 880 c, t dbSNP:757149784
885 885 a, g dbSNP:781003431
889 889 a, g dbSNP:749331027
917 917 g, t dbSNP:768888762
928 928 c, t dbSNP:779169422
935 935 a, g dbSNP:748355308
940 940 c, t dbSNP:148477186
941 941 a, g dbSNP:773619675
968 968 c, t dbSNP:779120079
982 982 a, g dbSNP:748302448
1000 1000 a, g dbSNP:772273628
1008 1008 a, g dbSNP:367912717
1022 1022 a, c dbSNP:747353115
1033 1033 c, g dbSNP:543704273
1047 1047 a, g dbSNP:565178707
1069 1069 a, g dbSNP:760015790
1072 1072 a, g dbSNP:770345333
1075 1075 c, t dbSNP:774978534
1081 1081 a, c dbSNP:762461183
1093 1093 c, t dbSNP:763751907
1095 1095 a, g dbSNP:773905498
1105 1105 a, g dbSNP:746179870
1111 1111 c, t dbSNP:756501234
1113 1113 a, g dbSNP:780436052
1116 1116 a, g dbSNP:749735817
1121 1121 -, aag dbSNP:751811710
1126 1126 a, g dbSNP:769259949
1129 1129 a, g dbSNP:142718201
1140 1140 c, t dbSNP:747695319
1146 1146 a, c dbSNP:771789973
1147 1147 c, g dbSNP:543538391
1148 1148 c, g dbSNP:369501728
1155 1155 c, t dbSNP:770822935
1160 1160 a, g dbSNP:776543112
1163 1163 c, t dbSNP:759379591
1167 1167 c, t dbSNP:375401606
1171 1171 a, g dbSNP:765287704
1173 1173 c, t dbSNP:367821941
1174 1174 a, g dbSNP:376136601
1176 1176 c, t dbSNP:767684695
1177 1177 a, g dbSNP:200393055
1183 1183 g, t dbSNP:756376673
1188 1188 a, g dbSNP:79997555
1191 1191 c, t dbSNP:112626578
1200 1200 a, g dbSNP:780378953
1206 1206 a, g dbSNP:754292583
1209 1209 a, g dbSNP:755371276
1212 1212 c, t dbSNP:779485530
1213 1213 a, c, g dbSNP:113014668
1216 1216 a, c dbSNP:771740867
1246 1246 a, g dbSNP:777467407
1266 1266 a, g dbSNP:750455956
1287 1287 c, g dbSNP:540062273
1304 1304 c, t dbSNP:201919660
1308 1308 a, t dbSNP:745604036
1334 1334 a, t dbSNP:769597380
1350 1350 c, t dbSNP:775194260
1354 1354 a, g dbSNP:749205858
1357 1357 c, t dbSNP:150816475
1358 1358 g, t dbSNP:773208934
1372 1372 c, g, t dbSNP:139260459
1373 1373 a, g dbSNP:373673287
1374 1374 a, g dbSNP:200827868
1384 1384 c, g dbSNP:369508611
1390 1390 a, c dbSNP:199944788
1393 1393 c, t dbSNP:753171450
1394 1394 a, g dbSNP:758973243
1396 1396 c, t dbSNP:144249834
1399 1399 c, t dbSNP:751059985
1405 1405 c, t dbSNP:756853250
1411 1411 a, c dbSNP:768510672
1435 1435 c, t dbSNP:41283421
1455 1455 c, t dbSNP:757750800
1456 1456 a, g dbSNP:767037674
1457 1457 c, t dbSNP:786205678
1465 1465 a, g, t dbSNP:749963678
1468 1468 a, c, t dbSNP:77633370
1486 1486 c, g dbSNP:377203949
1492 1492 a, g dbSNP:370610393
1495 1495 c, t dbSNP:748057828
1504 1504 c, t dbSNP:771962505
1525 1525 c, t dbSNP:781328154
1528 1528 c, t dbSNP:745943626
1537 1537 c, t dbSNP:35163502
1544 1544 c, g dbSNP:374550237
1550 1550 a, g dbSNP:763372641
1564 1564 c, t dbSNP:769117786
1567 1567 c, t dbSNP:200326853
1569 1569 c, t dbSNP:762374504
1576 1576 a, g dbSNP:368477125
1579 1579 a, g dbSNP:767909639
1584 1584 a, c, g dbSNP:145829003
1586 1586 c, t dbSNP:371856851
1600 1600 c, g, t dbSNP:148999974
1603 1603 a, g dbSNP:778667068
1608 1608 c, t dbSNP:752501819
1609 1609 a, g dbSNP:373590342
1612 1612 a, g dbSNP:777589328
1614 1614 a, t dbSNP:777033193
1618 1618 c, t dbSNP:143827534
1621 1621 c, t dbSNP:147971091
1627 1627 c, t dbSNP:780324094
1630 1630 c, t dbSNP:749505398
1636 1636 c, t dbSNP:769064528
1638 1638 g, t dbSNP:774786141
1639 1639 c, t dbSNP:762097729
1660 1660 a, g dbSNP:140714166
1665 1665 c, t dbSNP:568539129
1666 1666 a, c, g dbSNP:74349261
1670 1670 a, c, t dbSNP:138717943
1671 1671 a, g, t dbSNP:762709825
1672 1672 c, g dbSNP:751435156
1682 1682 a, c dbSNP:757192084
1683 1683 a, t dbSNP:767570841
1684 1684 g, t dbSNP:753916674
1691 1691 c, t dbSNP:755139197
1705 1705 a, g dbSNP:201508544
1717 1717 c, t dbSNP:142769381
1721 1721 a, c dbSNP:758706699
1728 1728 a, g dbSNP:777998360
1735 1735 c, t dbSNP:747378986
1737 1737 a, g dbSNP:771371291
1742 1742 c, t dbSNP:777149587
1745 1745 a, c dbSNP:745346700
1772 1772 a, g dbSNP:769158319
1785 1785 a, g dbSNP:775118101
1790 1790 a, g dbSNP:376831612
1795 1795 c, t dbSNP:763804925
1796 1796 a, g dbSNP:773956341
1801 1801 a, g dbSNP:761720053
1810 1810 a, g dbSNP:146977371
1813 1813 a, g dbSNP:752662972
1822 1822 a, g dbSNP:374319630
1828 1828 a, g dbSNP:764185871
1839 1839 c, t dbSNP:762998209
1840 1840 g, t dbSNP:751753990
1852 1852 a, c, g, t dbSNP:759685297
1858 1858 c, t dbSNP:750788268
1861 1861 c, t dbSNP:571769665
1871 1871 c, t dbSNP:780629597
1879 1879 c, t dbSNP:748702615
1899 1899 c, t dbSNP:768180703
1902 1902 c, g dbSNP:778615243
1903 1903 c, t dbSNP:747786910
1907 1907 a, c dbSNP:771916537
1912 1912 a, g dbSNP:773076606
1915 1915 g, t dbSNP:376329242
1916 1916 g, t dbSNP:539116380
1917 1917 a, g dbSNP:776663600
1919 1919 c, g dbSNP:759435121
1924 1924 g, t dbSNP:764141225
1926 1926 g, t dbSNP:774473938
1930 1930 a, c, t dbSNP:762021232
1932 1932 a, g dbSNP:553921530
1933 1933 a, g dbSNP:756528903
1936 1936 g, t dbSNP:766689873
1937 1937 a, g dbSNP:572392003
1943 1943 -, c dbSNP:745553450
1945 1945 c, t dbSNP:755494022
1948 1948 c, g dbSNP:778562003
1950 1950 c, t dbSNP:747666789
1951 1951 a, g dbSNP:758066997
1966 1966 c, t dbSNP:777592493
1967 1967 c, t dbSNP:746742357
2001 2001 c, t dbSNP:536574354
2016 2016 c, t dbSNP:770732457
2017 2017 a, g dbSNP:776342037
2022 2022 c, t dbSNP:2229773
2023 2023 a, g dbSNP:769793497
2029 2029 a, g dbSNP:576294738
2041 2041 c, g, t dbSNP:761900323
2044 2044 a, c dbSNP:773450052
2048 2048 c, t dbSNP:760854493
2057 2057 c, t dbSNP:543619460
2060 2060 c, t dbSNP:143781383
2068 2068 c, t dbSNP:755468217
2096 2096 c, t dbSNP:752624786
2111 2111 c, g dbSNP:2229772
2113 2113 a, c, g dbSNP:758015735
2125 2125 c, t dbSNP:746653550
2136 2136 g, t dbSNP:11544351
2155 2155 c, t dbSNP:545072314
2156 2156 a, g dbSNP:781040511
2166 2166 a, g dbSNP:559919766
2167 2167 a, g dbSNP:527302805
2173 2173 c, t dbSNP:139482076
2175 2175 a, g dbSNP:190879195
2184 2184 a, g, t dbSNP:183204850
2186 2186 -, gact dbSNP:777091819
2221 2221 c, g dbSNP:760945393
2230 2230 c, t dbSNP:571460851
2234 2234 c, t dbSNP:776997866
2235 2235 a, g dbSNP:538792963
2244 2244 c, t dbSNP:765801130
2245 2245 a, g dbSNP:547849750
2246 2246 a, c dbSNP:375417623
2251 2251 a, t dbSNP:763607614
2272 2272 a, g dbSNP:747078113
2294 2294 c, t dbSNP:763649611
2304 2304 c, t dbSNP:149687193
2305 2305 a, g dbSNP:536667337
2359 2359 c, t dbSNP:780727297
2365 2365 a, g dbSNP:115635151
2378 2378 a, c dbSNP:117770216
2386 2386 a, g dbSNP:537346006
2422 2422 c, t dbSNP:749208030
2428 2428 c, g dbSNP:367819767
2439 2439 c, t dbSNP:558760636
2440 2440 g, t dbSNP:370334154
2457 2457 c, g dbSNP:200674161
2461 2461 g, t dbSNP:375909325
2462 2462 a, t dbSNP:368586881
2464 2464 -, a dbSNP:748455062
2468 2468 g, t dbSNP:771137228
2469 2469 -, g dbSNP:770479738
2470 2470 c, g dbSNP:553845872
2476 2476 g, t dbSNP:759880021
2477 2477 c, t dbSNP:770262951
2490 2490 a, c dbSNP:371896486
2508 2508 c, t dbSNP:763553004
2511 2511 g, t dbSNP:764517107
2522 2522 c, t dbSNP:751026996
2523 2523 a, g dbSNP:761257563
2555 2555 c, t dbSNP:767090750
2565 2565 a, t dbSNP:185566558
2596 2596 a, t dbSNP:755818342
2619 2619 c, t dbSNP:542645312
2713 2713 c, g dbSNP:375581332
2743 2743 -, a dbSNP:779503010
2774 2774 c, t dbSNP:777254933
2787 2787 g, t dbSNP:759983760
2799 2799 c, g, t dbSNP:190326404
2926 2926 a, c dbSNP:531673704
2948 2948 a, g dbSNP:543728371
2977 2977 c, t dbSNP:767236403
3102 3102 c, g dbSNP:564963890
3121 3121 c, t dbSNP:532360714
3123 3123 c, t dbSNP:115248059
3126 3126 a, g dbSNP:74396306
3127 3127 c, t dbSNP:182891484
3128 3128 a, g dbSNP:376581605
3129 3129 -, ca dbSNP:536023561
3130 3130 a, g dbSNP:756956672
3136 3136 -, acaa dbSNP:552625476
3137 3137 c, t dbSNP:548225262
3139 3139 a, c, g dbSNP:368001358
3196 3196 c, t dbSNP:537376620
3201 3201 -, c dbSNP:71355453
3272 3272 g, t dbSNP:558844389
3323 3323 c, t dbSNP:571021564
3336 3336 c, t dbSNP:756042544
3366 3366 a, g dbSNP:140111856
3383 3383 -, gttg dbSNP:575638278

Target ORF information:

RefSeq Version XM_005257554
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens retinoic acid receptor, alpha (RARA), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_005257554

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGCCAGCA ACAGCAGCTC CTGCCCGACA CCTGGGGGCG GGCACCTCAA TGGGTACCCG 
GTGCCTCCCT ACGCCTTCTT CTTCCCCCCT ATGCTGGGTG GACTCTCCCC GCCAGGCGCT
CTGACCACTC TCCAGCACCA GCTTCCAGTT AGTGGATATA GCACACCATC CCCAGCCACC
ATTGAGACCC AGAGCAGCAG TTCTGAAGAG ATAGTGCCCA GCCCTCCCTC GCCACCCCCT
CTACCCCGCA TCTACAAGCC TTGCTTTGTC TGTCAGGACA AGTCCTCAGG CTACCACTAT
GGGGTCAGCG CCTGTGAGGG CTGCAAGGGC TTCTTCCGCC GCAGCATCCA GAAGAACATG
GTGTACACGT GTCACCGGGA CAAGAACTGC ATCATCAACA AGGTGACCCG GAACCGCTGC
CAGTACTGCC GACTGCAGAA GTGCTTTGAA GTGGGCATGT CCAAGGAGTC TGTGAGAAAC
GACCGAAACA AGAAGAAGAA GGAGGTGCCC AAGCCCGAGT GCTCTGAGAG CTACACGCTG
ACGCCGGAGG TGGGGGAGCT CATTGAGAAG GTGCGCAAAG CGCACCAGGA AACCTTCCCT
GCCCTCTGCC AGCTGGGCAA ATACACTACG AACAACAGCT CAGAACAACG TGTCTCTCTG
GACATTGACC TCTGGGACAA GTTCAGTGAA CTCTCCACCA AGTGCATCAT TAAGACTGTG
GAGTTCGCCA AGCAGCTGCC CGGCTTCACC ACCCTCACCA TCGCCGACCA GATCACCCTC
CTCAAGGCTG CCTGCCTGGA CATCCTGATC CTGCGGATCT GCACGCGGTA CACGCCCGAG
CAGGACACCA TGACCTTCTC GGACGGGCTG ACCCTGAACC GGACCCAGAT GCACAACGCT
GGCTTCGGCC CCCTCACCGA CCTGGTCTTT GCCTTCGCCA ACCAGCTGCT GCCCCTGGAG
ATGGATGATG CGGAGACGGG GCTGCTCAGC GCCATCTGCC TCATCTGCGG AGACCGCCAG
GACCTGGAGC AGCCGGACCG GGTGGACATG CTGCAGGAGC CGCTGCTGGA GGCGCTAAAG
GTCTACGTGC GGAAGCGGAG GCCCAGCCGC CCCCACATGT TCCCCAAGAT GCTAATGAAG
ATTACTGACC TGCGAAGCAT CAGCGCCAAG GGGGCTGAGC GGGTGATCAC GCTGAAGATG
GAGATCCCGG GCTCCATGCC GCCTCTCATC CAGGAAATGT TGGAGAACTC AGAGGGCCTG
GACACTCTGA GCGGACAGCC GGGGGGTGGG GGGCGGGACG GGGGTGGCCT GGCCCCCCCG
CCAGGCAGCT GTAGCCCCAG CCTCAGCCCC AGCTCCAACA GAAGCAGCCC GGCCACCCAC
TCCCCGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu26893
Accession Version XM_011525095.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1389bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector Document: User manual_GenEZ ORF Clone Products.pdf (pdf)
Clone information Clone Map
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags Document: MSDS_GenEZ ORF Clone Products.pdf (pdf)
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear Document: OHu26893D_COA.pdf (pdf)
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product retinoic acid receptor alpha isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_010783.16) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGCCAGCA ACAGCAGCTC CTGCCCGACA CCTGGGGGCG GGCACCTCAA TGGGTACCCG 
GTGCCTCCCT ACGCCTTCTT CTTCCCCCCT ATGCTGGGTG GACTCTCCCC GCCAGGCGCT
CTGACCACTC TCCAGCACCA GCTTCCAGTT AGTGGATATA GCACACCATC CCCAGCCACC
ATTGAGACCC AGAGCAGCAG TTCTGAAGAG ATAGTGCCCA GCCCTCCCTC GCCACCCCCT
CTACCCCGCA TCTACAAGCC TTGCTTTGTC TGTCAGGACA AGTCCTCAGG CTACCACTAT
GGGGTCAGCG CCTGTGAGGG CTGCAAGGGC TTCTTCCGCC GCAGCATCCA GAAGAACATG
GTGTACACGT GTCACCGGGA CAAGAACTGC ATCATCAACA AGGTGACCCG GAACCGCTGC
CAGTACTGCC GACTGCAGAA GTGCTTTGAA GTGGGCATGT CCAAGGAGTC TGTGAGAAAC
GACCGAAACA AGAAGAAGAA GGAGGTGCCC AAGCCCGAGT GCTCTGAGAG CTACACGCTG
ACGCCGGAGG TGGGGGAGCT CATTGAGAAG GTGCGCAAAG CGCACCAGGA AACCTTCCCT
GCCCTCTGCC AGCTGGGCAA ATACACTACG AACAACAGCT CAGAACAACG TGTCTCTCTG
GACATTGACC TCTGGGACAA GTTCAGTGAA CTCTCCACCA AGTGCATCAT TAAGACTGTG
GAGTTCGCCA AGCAGCTGCC CGGCTTCACC ACCCTCACCA TCGCCGACCA GATCACCCTC
CTCAAGGCTG CCTGCCTGGA CATCCTGATC CTGCGGATCT GCACGCGGTA CACGCCCGAG
CAGGACACCA TGACCTTCTC GGACGGGCTG ACCCTGAACC GGACCCAGAT GCACAACGCT
GGCTTCGGCC CCCTCACCGA CCTGGTCTTT GCCTTCGCCA ACCAGCTGCT GCCCCTGGAG
ATGGATGATG CGGAGACGGG GCTGCTCAGC GCCATCTGCC TCATCTGCGG AGACCGCCAG
GACCTGGAGC AGCCGGACCG GGTGGACATG CTGCAGGAGC CGCTGCTGGA GGCGCTAAAG
GTCTACGTGC GGAAGCGGAG GCCCAGCCGC CCCCACATGT TCCCCAAGAT GCTAATGAAG
ATTACTGACC TGCGAAGCAT CAGCGCCAAG GGGGCTGAGC GGGTGATCAC GCTGAAGATG
GAGATCCCGG GCTCCATGCC GCCTCTCATC CAGGAAATGT TGGAGAACTC AGAGGGCCTG
GACACTCTGA GCGGACAGCC GGGGGGTGGG GGGCGGGACG GGGGTGGCCT GGCCCCCCCG
CCAGGCAGCT GTAGCCCCAG CCTCAGCCCC AGCTCCAACA GAAGCAGCCC GGCCACCCAC
TCCCCGTGA
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeqXP_011523397.1
CDS529..1917
Misc Feature(1)583..>732(+)
Misc Feature(2)772..1026(+)
Misc Feature(3)790..957(+)
Misc Feature(4)820..1005(+)
Misc Feature(5)931..951(+)
Misc Feature(6)1084..1776(+)
Misc Feature(7)1210..1770(+)
Misc Feature(8)1246..1767(+)
Misc Feature(9)1471..1686(+)
Translation
Position Chain Variation Link
6 6 a, g, t dbSNP:566123904
42 42 c, g dbSNP:533911041
48 48 c, t dbSNP:768334912
111 111 c, t dbSNP:547812892
129 129 c, t dbSNP:190676187
157 157 c, t dbSNP:530302985
202 202 g, t dbSNP:550692831
243 243 c, t dbSNP:143366253
273 273 a, g dbSNP:535249147
279 279 c, t dbSNP:765127095
301 301 c, t dbSNP:539890007
368 368 g, t dbSNP:551496545
377 377 c, g dbSNP:566814220
396 396 a, t dbSNP:769075062
397 397 a, g dbSNP:534271469
444 444 a, c dbSNP:182564001
475 475 a, c dbSNP:574319362
478 478 -, ag dbSNP:773082864
483 483 c, t dbSNP:200235947
499 499 c, g dbSNP:748177728
501 501 g, t dbSNP:144842676
503 503 c, t dbSNP:778106143
505 505 c, g dbSNP:374636114
510 510 -, ctga dbSNP:755958399
521 521 c, t dbSNP:575427178
537 537 c, t dbSNP:545841176
538 538 a, c dbSNP:759886628
546 546 c, t dbSNP:770268838
548 548 -, cctgc dbSNP:777315412
548 548 c, g dbSNP:150291626
554 554 c, t dbSNP:762408148
555 555 a, g dbSNP:563927918
562 562 -, g dbSNP:748767479
563 563 c, g dbSNP:137929765
566 566 a, g dbSNP:761512575
567 567 c, t dbSNP:767138451
571 571 c, t dbSNP:750162967
578 578 a, g dbSNP:368040095
586 586 c, g dbSNP:201015843
587 587 c, t dbSNP:773378786
588 588 a, c, g dbSNP:753861488
600 600 c, t dbSNP:148576098
601 601 a, g, t dbSNP:371882393
603 603 c, t dbSNP:781275602
606 606 a, c dbSNP:746187167
618 618 c, t dbSNP:770175416
622 622 a, c, t dbSNP:775872347
627 627 g, t dbSNP:769208251
638 638 c, t dbSNP:561629991
639 639 a, g dbSNP:376736940
645 645 c, t dbSNP:767135725
646 646 a, c, g, t dbSNP:576185106
648 648 c, t dbSNP:766250061
649 649 c, g, t dbSNP:138781565
656 656 c, g dbSNP:116538651
666 666 a, c dbSNP:562304039
667 667 c, t dbSNP:757297600
683 683 a, g dbSNP:781428265
686 686 -, tagcacacc dbSNP:770639799
687 687 c, t dbSNP:746045441
691 691 a, c dbSNP:756376800
692 692 c, t dbSNP:780381092
693 693 a, c dbSNP:749718384
697 697 c, t dbSNP:200014376
703 703 g, t dbSNP:774732066
712 712 a, g dbSNP:753325918
740 740 c, t dbSNP:533798657
759 759 a, g dbSNP:2229771
763 763 c, g dbSNP:752378107
765 765 c, t dbSNP:758087141
766 766 c, g dbSNP:777603974
776 776 a, g dbSNP:751370458
777 777 c, t dbSNP:757149784
782 782 a, g dbSNP:781003431
786 786 a, g dbSNP:749331027
814 814 g, t dbSNP:768888762
825 825 c, t dbSNP:779169422
832 832 a, g dbSNP:748355308
837 837 c, t dbSNP:148477186
838 838 a, g dbSNP:773619675
865 865 c, t dbSNP:779120079
879 879 a, g dbSNP:748302448
897 897 a, g dbSNP:772273628
905 905 a, g dbSNP:367912717
919 919 a, c dbSNP:747353115
930 930 c, g dbSNP:543704273
944 944 a, g dbSNP:565178707
966 966 a, g dbSNP:760015790
969 969 a, g dbSNP:770345333
972 972 c, t dbSNP:774978534
978 978 a, c dbSNP:762461183
990 990 c, t dbSNP:763751907
992 992 a, g dbSNP:773905498
1002 1002 a, g dbSNP:746179870
1008 1008 c, t dbSNP:756501234
1010 1010 a, g dbSNP:780436052
1013 1013 a, g dbSNP:749735817
1018 1018 -, aag dbSNP:751811710
1023 1023 a, g dbSNP:769259949
1026 1026 a, g dbSNP:142718201
1037 1037 c, t dbSNP:747695319
1043 1043 a, c dbSNP:771789973
1044 1044 c, g dbSNP:543538391
1045 1045 c, g dbSNP:369501728
1052 1052 c, t dbSNP:770822935
1057 1057 a, g dbSNP:776543112
1060 1060 c, t dbSNP:759379591
1064 1064 c, t dbSNP:375401606
1068 1068 a, g dbSNP:765287704
1070 1070 c, t dbSNP:367821941
1071 1071 a, g dbSNP:376136601
1073 1073 c, t dbSNP:767684695
1074 1074 a, g dbSNP:200393055
1080 1080 g, t dbSNP:756376673
1085 1085 a, g dbSNP:79997555
1088 1088 c, t dbSNP:112626578
1097 1097 a, g dbSNP:780378953
1103 1103 a, g dbSNP:754292583
1106 1106 a, g dbSNP:755371276
1109 1109 c, t dbSNP:779485530
1110 1110 a, c, g dbSNP:113014668
1113 1113 a, c dbSNP:771740867
1143 1143 a, g dbSNP:777467407
1163 1163 a, g dbSNP:750455956
1184 1184 c, g dbSNP:540062273
1201 1201 c, t dbSNP:201919660
1205 1205 a, t dbSNP:745604036
1231 1231 a, t dbSNP:769597380
1247 1247 c, t dbSNP:775194260
1251 1251 a, g dbSNP:749205858
1254 1254 c, t dbSNP:150816475
1255 1255 g, t dbSNP:773208934
1269 1269 c, g, t dbSNP:139260459
1270 1270 a, g dbSNP:373673287
1271 1271 a, g dbSNP:200827868
1281 1281 c, g dbSNP:369508611
1287 1287 a, c dbSNP:199944788
1290 1290 c, t dbSNP:753171450
1291 1291 a, g dbSNP:758973243
1293 1293 c, t dbSNP:144249834
1296 1296 c, t dbSNP:751059985
1302 1302 c, t dbSNP:756853250
1308 1308 a, c dbSNP:768510672
1332 1332 c, t dbSNP:41283421
1352 1352 c, t dbSNP:757750800
1353 1353 a, g dbSNP:767037674
1354 1354 c, t dbSNP:786205678
1362 1362 a, g, t dbSNP:749963678
1365 1365 a, c, t dbSNP:77633370
1383 1383 c, g dbSNP:377203949
1389 1389 a, g dbSNP:370610393
1392 1392 c, t dbSNP:748057828
1401 1401 c, t dbSNP:771962505
1422 1422 c, t dbSNP:781328154
1425 1425 c, t dbSNP:745943626
1434 1434 c, t dbSNP:35163502
1441 1441 c, g dbSNP:374550237
1447 1447 a, g dbSNP:763372641
1461 1461 c, t dbSNP:769117786
1464 1464 c, t dbSNP:200326853
1466 1466 c, t dbSNP:762374504
1473 1473 a, g dbSNP:368477125
1476 1476 a, g dbSNP:767909639
1481 1481 a, c, g dbSNP:145829003
1483 1483 c, t dbSNP:371856851
1497 1497 c, g, t dbSNP:148999974
1500 1500 a, g dbSNP:778667068
1505 1505 c, t dbSNP:752501819
1506 1506 a, g dbSNP:373590342
1509 1509 a, g dbSNP:777589328
1511 1511 a, t dbSNP:777033193
1515 1515 c, t dbSNP:143827534
1518 1518 c, t dbSNP:147971091
1524 1524 c, t dbSNP:780324094
1527 1527 c, t dbSNP:749505398
1533 1533 c, t dbSNP:769064528
1535 1535 g, t dbSNP:774786141
1536 1536 c, t dbSNP:762097729
1557 1557 a, g dbSNP:140714166
1562 1562 c, t dbSNP:568539129
1563 1563 a, c, g dbSNP:74349261
1567 1567 a, c, t dbSNP:138717943
1568 1568 a, g, t dbSNP:762709825
1569 1569 c, g dbSNP:751435156
1579 1579 a, c dbSNP:757192084
1580 1580 a, t dbSNP:767570841
1581 1581 g, t dbSNP:753916674
1588 1588 c, t dbSNP:755139197
1602 1602 a, g dbSNP:201508544
1614 1614 c, t dbSNP:142769381
1618 1618 a, c dbSNP:758706699
1625 1625 a, g dbSNP:777998360
1632 1632 c, t dbSNP:747378986
1634 1634 a, g dbSNP:771371291
1639 1639 c, t dbSNP:777149587
1642 1642 a, c dbSNP:745346700
1669 1669 a, g dbSNP:769158319
1682 1682 a, g dbSNP:775118101
1687 1687 a, g dbSNP:376831612
1692 1692 c, t dbSNP:763804925
1693 1693 a, g dbSNP:773956341
1698 1698 a, g dbSNP:761720053
1707 1707 a, g dbSNP:146977371
1710 1710 a, g dbSNP:752662972
1719 1719 a, g dbSNP:374319630
1725 1725 a, g dbSNP:764185871
1736 1736 c, t dbSNP:762998209
1737 1737 g, t dbSNP:751753990
1749 1749 a, c, g, t dbSNP:759685297
1755 1755 c, t dbSNP:750788268
1758 1758 c, t dbSNP:571769665
1768 1768 c, t dbSNP:780629597
1776 1776 c, t dbSNP:748702615
1796 1796 c, t dbSNP:768180703
1799 1799 c, g dbSNP:778615243
1800 1800 c, t dbSNP:747786910
1804 1804 a, c dbSNP:771916537
1809 1809 a, g dbSNP:773076606
1812 1812 g, t dbSNP:376329242
1813 1813 g, t dbSNP:539116380
1814 1814 a, g dbSNP:776663600
1816 1816 c, g dbSNP:759435121
1821 1821 g, t dbSNP:764141225
1823 1823 g, t dbSNP:774473938
1827 1827 a, c, t dbSNP:762021232
1829 1829 a, g dbSNP:553921530
1830 1830 a, g dbSNP:756528903
1833 1833 g, t dbSNP:766689873
1834 1834 a, g dbSNP:572392003
1840 1840 -, c dbSNP:745553450
1842 1842 c, t dbSNP:755494022
1845 1845 c, g dbSNP:778562003
1847 1847 c, t dbSNP:747666789
1848 1848 a, g dbSNP:758066997
1863 1863 c, t dbSNP:777592493
1864 1864 c, t dbSNP:746742357
1898 1898 c, t dbSNP:536574354
1913 1913 c, t dbSNP:770732457
1914 1914 a, g dbSNP:776342037
1919 1919 c, t dbSNP:2229773
1920 1920 a, g dbSNP:769793497
1926 1926 a, g dbSNP:576294738
1938 1938 c, g, t dbSNP:761900323
1941 1941 a, c dbSNP:773450052
1945 1945 c, t dbSNP:760854493
1954 1954 c, t dbSNP:543619460
1957 1957 c, t dbSNP:143781383
1965 1965 c, t dbSNP:755468217
1993 1993 c, t dbSNP:752624786
2008 2008 c, g dbSNP:2229772
2010 2010 a, c, g dbSNP:758015735
2022 2022 c, t dbSNP:746653550
2033 2033 g, t dbSNP:11544351
2052 2052 c, t dbSNP:545072314
2053 2053 a, g dbSNP:781040511
2063 2063 a, g dbSNP:559919766
2064 2064 a, g dbSNP:527302805
2070 2070 c, t dbSNP:139482076
2072 2072 a, g dbSNP:190879195
2081 2081 a, g, t dbSNP:183204850
2083 2083 -, gact dbSNP:777091819
2118 2118 c, g dbSNP:760945393
2127 2127 c, t dbSNP:571460851
2131 2131 c, t dbSNP:776997866
2132 2132 a, g dbSNP:538792963
2141 2141 c, t dbSNP:765801130
2142 2142 a, g dbSNP:547849750
2143 2143 a, c dbSNP:375417623
2148 2148 a, t dbSNP:763607614
2169 2169 a, g dbSNP:747078113
2191 2191 c, t dbSNP:763649611
2201 2201 c, t dbSNP:149687193
2202 2202 a, g dbSNP:536667337
2256 2256 c, t dbSNP:780727297
2262 2262 a, g dbSNP:115635151
2275 2275 a, c dbSNP:117770216
2283 2283 a, g dbSNP:537346006
2319 2319 c, t dbSNP:749208030
2325 2325 c, g dbSNP:367819767
2336 2336 c, t dbSNP:558760636
2337 2337 g, t dbSNP:370334154
2354 2354 c, g dbSNP:200674161
2358 2358 g, t dbSNP:375909325
2359 2359 a, t dbSNP:368586881
2361 2361 -, a dbSNP:748455062
2365 2365 g, t dbSNP:771137228
2366 2366 -, g dbSNP:770479738
2367 2367 c, g dbSNP:553845872
2373 2373 g, t dbSNP:759880021
2374 2374 c, t dbSNP:770262951
2387 2387 a, c dbSNP:371896486
2405 2405 c, t dbSNP:763553004
2408 2408 g, t dbSNP:764517107
2419 2419 c, t dbSNP:751026996
2420 2420 a, g dbSNP:761257563
2452 2452 c, t dbSNP:767090750
2462 2462 a, t dbSNP:185566558
2493 2493 a, t dbSNP:755818342
2516 2516 c, t dbSNP:542645312
2610 2610 c, g dbSNP:375581332
2640 2640 -, a dbSNP:779503010
2671 2671 c, t dbSNP:777254933
2684 2684 g, t dbSNP:759983760
2696 2696 c, g, t dbSNP:190326404
2823 2823 a, c dbSNP:531673704
2845 2845 a, g dbSNP:543728371
2874 2874 c, t dbSNP:767236403
2999 2999 c, g dbSNP:564963890
3018 3018 c, t dbSNP:532360714
3020 3020 c, t dbSNP:115248059
3023 3023 a, g dbSNP:74396306
3024 3024 c, t dbSNP:182891484
3025 3025 a, g dbSNP:376581605
3026 3026 -, ca dbSNP:536023561
3027 3027 a, g dbSNP:756956672
3033 3033 -, acaa dbSNP:552625476
3034 3034 c, t dbSNP:548225262
3036 3036 a, c, g dbSNP:368001358
3093 3093 c, t dbSNP:537376620
3098 3098 -, c dbSNP:71355453
3169 3169 g, t dbSNP:558844389
3220 3220 c, t dbSNP:571021564
3233 3233 c, t dbSNP:756042544
3263 3263 a, g dbSNP:140111856
3280 3280 -, gttg dbSNP:575638278

Target ORF information:

RefSeq Version XM_011525095
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens retinoic acid receptor, alpha (RARA), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_011525095

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGCCAGCA ACAGCAGCTC CTGCCCGACA CCTGGGGGCG GGCACCTCAA TGGGTACCCG 
GTGCCTCCCT ACGCCTTCTT CTTCCCCCCT ATGCTGGGTG GACTCTCCCC GCCAGGCGCT
CTGACCACTC TCCAGCACCA GCTTCCAGTT AGTGGATATA GCACACCATC CCCAGCCACC
ATTGAGACCC AGAGCAGCAG TTCTGAAGAG ATAGTGCCCA GCCCTCCCTC GCCACCCCCT
CTACCCCGCA TCTACAAGCC TTGCTTTGTC TGTCAGGACA AGTCCTCAGG CTACCACTAT
GGGGTCAGCG CCTGTGAGGG CTGCAAGGGC TTCTTCCGCC GCAGCATCCA GAAGAACATG
GTGTACACGT GTCACCGGGA CAAGAACTGC ATCATCAACA AGGTGACCCG GAACCGCTGC
CAGTACTGCC GACTGCAGAA GTGCTTTGAA GTGGGCATGT CCAAGGAGTC TGTGAGAAAC
GACCGAAACA AGAAGAAGAA GGAGGTGCCC AAGCCCGAGT GCTCTGAGAG CTACACGCTG
ACGCCGGAGG TGGGGGAGCT CATTGAGAAG GTGCGCAAAG CGCACCAGGA AACCTTCCCT
GCCCTCTGCC AGCTGGGCAA ATACACTACG AACAACAGCT CAGAACAACG TGTCTCTCTG
GACATTGACC TCTGGGACAA GTTCAGTGAA CTCTCCACCA AGTGCATCAT TAAGACTGTG
GAGTTCGCCA AGCAGCTGCC CGGCTTCACC ACCCTCACCA TCGCCGACCA GATCACCCTC
CTCAAGGCTG CCTGCCTGGA CATCCTGATC CTGCGGATCT GCACGCGGTA CACGCCCGAG
CAGGACACCA TGACCTTCTC GGACGGGCTG ACCCTGAACC GGACCCAGAT GCACAACGCT
GGCTTCGGCC CCCTCACCGA CCTGGTCTTT GCCTTCGCCA ACCAGCTGCT GCCCCTGGAG
ATGGATGATG CGGAGACGGG GCTGCTCAGC GCCATCTGCC TCATCTGCGG AGACCGCCAG
GACCTGGAGC AGCCGGACCG GGTGGACATG CTGCAGGAGC CGCTGCTGGA GGCGCTAAAG
GTCTACGTGC GGAAGCGGAG GCCCAGCCGC CCCCACATGT TCCCCAAGAT GCTAATGAAG
ATTACTGACC TGCGAAGCAT CAGCGCCAAG GGGGCTGAGC GGGTGATCAC GCTGAAGATG
GAGATCCCGG GCTCCATGCC GCCTCTCATC CAGGAAATGT TGGAGAACTC AGAGGGCCTG
GACACTCTGA GCGGACAGCC GGGGGGTGGG GGGCGGGACG GGGGTGGCCT GGCCCCCCCG
CCAGGCAGCT GTAGCCCCAG CCTCAGCCCC AGCTCCAACA GAAGCAGCCC GGCCACCCAC
TCCCCGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu26893
Accession Version XM_005257553.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1389bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector Document: User manual_GenEZ ORF Clone Products.pdf (pdf)
Clone information Clone Map
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags Document: MSDS_GenEZ ORF Clone Products.pdf (pdf)
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear Document: OHu26893D_COA.pdf (pdf)
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product retinoic acid receptor alpha isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_010783.16) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGCCAGCA ACAGCAGCTC CTGCCCGACA CCTGGGGGCG GGCACCTCAA TGGGTACCCG 
GTGCCTCCCT ACGCCTTCTT CTTCCCCCCT ATGCTGGGTG GACTCTCCCC GCCAGGCGCT
CTGACCACTC TCCAGCACCA GCTTCCAGTT AGTGGATATA GCACACCATC CCCAGCCACC
ATTGAGACCC AGAGCAGCAG TTCTGAAGAG ATAGTGCCCA GCCCTCCCTC GCCACCCCCT
CTACCCCGCA TCTACAAGCC TTGCTTTGTC TGTCAGGACA AGTCCTCAGG CTACCACTAT
GGGGTCAGCG CCTGTGAGGG CTGCAAGGGC TTCTTCCGCC GCAGCATCCA GAAGAACATG
GTGTACACGT GTCACCGGGA CAAGAACTGC ATCATCAACA AGGTGACCCG GAACCGCTGC
CAGTACTGCC GACTGCAGAA GTGCTTTGAA GTGGGCATGT CCAAGGAGTC TGTGAGAAAC
GACCGAAACA AGAAGAAGAA GGAGGTGCCC AAGCCCGAGT GCTCTGAGAG CTACACGCTG
ACGCCGGAGG TGGGGGAGCT CATTGAGAAG GTGCGCAAAG CGCACCAGGA AACCTTCCCT
GCCCTCTGCC AGCTGGGCAA ATACACTACG AACAACAGCT CAGAACAACG TGTCTCTCTG
GACATTGACC TCTGGGACAA GTTCAGTGAA CTCTCCACCA AGTGCATCAT TAAGACTGTG
GAGTTCGCCA AGCAGCTGCC CGGCTTCACC ACCCTCACCA TCGCCGACCA GATCACCCTC
CTCAAGGCTG CCTGCCTGGA CATCCTGATC CTGCGGATCT GCACGCGGTA CACGCCCGAG
CAGGACACCA TGACCTTCTC GGACGGGCTG ACCCTGAACC GGACCCAGAT GCACAACGCT
GGCTTCGGCC CCCTCACCGA CCTGGTCTTT GCCTTCGCCA ACCAGCTGCT GCCCCTGGAG
ATGGATGATG CGGAGACGGG GCTGCTCAGC GCCATCTGCC TCATCTGCGG AGACCGCCAG
GACCTGGAGC AGCCGGACCG GGTGGACATG CTGCAGGAGC CGCTGCTGGA GGCGCTAAAG
GTCTACGTGC GGAAGCGGAG GCCCAGCCGC CCCCACATGT TCCCCAAGAT GCTAATGAAG
ATTACTGACC TGCGAAGCAT CAGCGCCAAG GGGGCTGAGC GGGTGATCAC GCTGAAGATG
GAGATCCCGG GCTCCATGCC GCCTCTCATC CAGGAAATGT TGGAGAACTC AGAGGGCCTG
GACACTCTGA GCGGACAGCC GGGGGGTGGG GGGCGGGACG GGGGTGGCCT GGCCCCCCCG
CCAGGCAGCT GTAGCCCCAG CCTCAGCCCC AGCTCCAACA GAAGCAGCCC GGCCACCCAC
TCCCCGTGA
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeqXP_005257610.1
CDS383..1771
Misc Feature(1)437..>586(+)
Misc Feature(2)626..880(+)
Misc Feature(3)644..811(+)
Misc Feature(4)674..859(+)
Misc Feature(5)785..805(+)
Misc Feature(6)938..1630(+)
Misc Feature(7)1064..1624(+)
Misc Feature(8)1100..1621(+)
Misc Feature(9)1325..1540(+)
Translation
Position Chain Variation Link
56 56 g, t dbSNP:550692831
97 97 c, t dbSNP:143366253
127 127 a, g dbSNP:535249147
133 133 c, t dbSNP:765127095
155 155 c, t dbSNP:539890007
222 222 g, t dbSNP:551496545
231 231 c, g dbSNP:566814220
250 250 a, t dbSNP:769075062
251 251 a, g dbSNP:534271469
298 298 a, c dbSNP:182564001
329 329 a, c dbSNP:574319362
332 332 -, ag dbSNP:773082864
337 337 c, t dbSNP:200235947
353 353 c, g dbSNP:748177728
355 355 g, t dbSNP:144842676
357 357 c, t dbSNP:778106143
359 359 c, g dbSNP:374636114
364 364 -, ctga dbSNP:755958399
375 375 c, t dbSNP:575427178
391 391 c, t dbSNP:545841176
392 392 a, c dbSNP:759886628
400 400 c, t dbSNP:770268838
402 402 -, cctgc dbSNP:777315412
402 402 c, g dbSNP:150291626
408 408 c, t dbSNP:762408148
409 409 a, g dbSNP:563927918
416 416 -, g dbSNP:748767479
417 417 c, g dbSNP:137929765
420 420 a, g dbSNP:761512575
421 421 c, t dbSNP:767138451
425 425 c, t dbSNP:750162967
432 432 a, g dbSNP:368040095
440 440 c, g dbSNP:201015843
441 441 c, t dbSNP:773378786
442 442 a, c, g dbSNP:753861488
454 454 c, t dbSNP:148576098
455 455 a, g, t dbSNP:371882393
457 457 c, t dbSNP:781275602
460 460 a, c dbSNP:746187167
472 472 c, t dbSNP:770175416
476 476 a, c, t dbSNP:775872347
481 481 g, t dbSNP:769208251
492 492 c, t dbSNP:561629991
493 493 a, g dbSNP:376736940
499 499 c, t dbSNP:767135725
500 500 a, c, g, t dbSNP:576185106
502 502 c, t dbSNP:766250061
503 503 c, g, t dbSNP:138781565
510 510 c, g dbSNP:116538651
520 520 a, c dbSNP:562304039
521 521 c, t dbSNP:757297600
537 537 a, g dbSNP:781428265
540 540 -, tagcacacc dbSNP:770639799
541 541 c, t dbSNP:746045441
545 545 a, c dbSNP:756376800
546 546 c, t dbSNP:780381092
547 547 a, c dbSNP:749718384
551 551 c, t dbSNP:200014376
557 557 g, t dbSNP:774732066
566 566 a, g dbSNP:753325918
594 594 c, t dbSNP:533798657
613 613 a, g dbSNP:2229771
617 617 c, g dbSNP:752378107
619 619 c, t dbSNP:758087141
620 620 c, g dbSNP:777603974
630 630 a, g dbSNP:751370458
631 631 c, t dbSNP:757149784
636 636 a, g dbSNP:781003431
640 640 a, g dbSNP:749331027
668 668 g, t dbSNP:768888762
679 679 c, t dbSNP:779169422
686 686 a, g dbSNP:748355308
691 691 c, t dbSNP:148477186
692 692 a, g dbSNP:773619675
719 719 c, t dbSNP:779120079
733 733 a, g dbSNP:748302448
751 751 a, g dbSNP:772273628
759 759 a, g dbSNP:367912717
773 773 a, c dbSNP:747353115
784 784 c, g dbSNP:543704273
798 798 a, g dbSNP:565178707
820 820 a, g dbSNP:760015790
823 823 a, g dbSNP:770345333
826 826 c, t dbSNP:774978534
832 832 a, c dbSNP:762461183
844 844 c, t dbSNP:763751907
846 846 a, g dbSNP:773905498
856 856 a, g dbSNP:746179870
862 862 c, t dbSNP:756501234
864 864 a, g dbSNP:780436052
867 867 a, g dbSNP:749735817
872 872 -, aag dbSNP:751811710
877 877 a, g dbSNP:769259949
880 880 a, g dbSNP:142718201
891 891 c, t dbSNP:747695319
897 897 a, c dbSNP:771789973
898 898 c, g dbSNP:543538391
899 899 c, g dbSNP:369501728
906 906 c, t dbSNP:770822935
911 911 a, g dbSNP:776543112
914 914 c, t dbSNP:759379591
918 918 c, t dbSNP:375401606
922 922 a, g dbSNP:765287704
924 924 c, t dbSNP:367821941
925 925 a, g dbSNP:376136601
927 927 c, t dbSNP:767684695
928 928 a, g dbSNP:200393055
934 934 g, t dbSNP:756376673
939 939 a, g dbSNP:79997555
942 942 c, t dbSNP:112626578
951 951 a, g dbSNP:780378953
957 957 a, g dbSNP:754292583
960 960 a, g dbSNP:755371276
963 963 c, t dbSNP:779485530
964 964 a, c, g dbSNP:113014668
967 967 a, c dbSNP:771740867
997 997 a, g dbSNP:777467407
1017 1017 a, g dbSNP:750455956
1038 1038 c, g dbSNP:540062273
1055 1055 c, t dbSNP:201919660
1059 1059 a, t dbSNP:745604036
1085 1085 a, t dbSNP:769597380
1101 1101 c, t dbSNP:775194260
1105 1105 a, g dbSNP:749205858
1108 1108 c, t dbSNP:150816475
1109 1109 g, t dbSNP:773208934
1123 1123 c, g, t dbSNP:139260459
1124 1124 a, g dbSNP:373673287
1125 1125 a, g dbSNP:200827868
1135 1135 c, g dbSNP:369508611
1141 1141 a, c dbSNP:199944788
1144 1144 c, t dbSNP:753171450
1145 1145 a, g dbSNP:758973243
1147 1147 c, t dbSNP:144249834
1150 1150 c, t dbSNP:751059985
1156 1156 c, t dbSNP:756853250
1162 1162 a, c dbSNP:768510672
1186 1186 c, t dbSNP:41283421
1206 1206 c, t dbSNP:757750800
1207 1207 a, g dbSNP:767037674
1208 1208 c, t dbSNP:786205678
1216 1216 a, g, t dbSNP:749963678
1219 1219 a, c, t dbSNP:77633370
1237 1237 c, g dbSNP:377203949
1243 1243 a, g dbSNP:370610393
1246 1246 c, t dbSNP:748057828
1255 1255 c, t dbSNP:771962505
1276 1276 c, t dbSNP:781328154
1279 1279 c, t dbSNP:745943626
1288 1288 c, t dbSNP:35163502
1295 1295 c, g dbSNP:374550237
1301 1301 a, g dbSNP:763372641
1315 1315 c, t dbSNP:769117786
1318 1318 c, t dbSNP:200326853
1320 1320 c, t dbSNP:762374504
1327 1327 a, g dbSNP:368477125
1330 1330 a, g dbSNP:767909639
1335 1335 a, c, g dbSNP:145829003
1337 1337 c, t dbSNP:371856851
1351 1351 c, g, t dbSNP:148999974
1354 1354 a, g dbSNP:778667068
1359 1359 c, t dbSNP:752501819
1360 1360 a, g dbSNP:373590342
1363 1363 a, g dbSNP:777589328
1365 1365 a, t dbSNP:777033193
1369 1369 c, t dbSNP:143827534
1372 1372 c, t dbSNP:147971091
1378 1378 c, t dbSNP:780324094
1381 1381 c, t dbSNP:749505398
1387 1387 c, t dbSNP:769064528
1389 1389 g, t dbSNP:774786141
1390 1390 c, t dbSNP:762097729
1411 1411 a, g dbSNP:140714166
1416 1416 c, t dbSNP:568539129
1417 1417 a, c, g dbSNP:74349261
1421 1421 a, c, t dbSNP:138717943
1422 1422 a, g, t dbSNP:762709825
1423 1423 c, g dbSNP:751435156
1433 1433 a, c dbSNP:757192084
1434 1434 a, t dbSNP:767570841
1435 1435 g, t dbSNP:753916674
1442 1442 c, t dbSNP:755139197
1456 1456 a, g dbSNP:201508544
1468 1468 c, t dbSNP:142769381
1472 1472 a, c dbSNP:758706699
1479 1479 a, g dbSNP:777998360
1486 1486 c, t dbSNP:747378986
1488 1488 a, g dbSNP:771371291
1493 1493 c, t dbSNP:777149587
1496 1496 a, c dbSNP:745346700
1523 1523 a, g dbSNP:769158319
1536 1536 a, g dbSNP:775118101
1541 1541 a, g dbSNP:376831612
1546 1546 c, t dbSNP:763804925
1547 1547 a, g dbSNP:773956341
1552 1552 a, g dbSNP:761720053
1561 1561 a, g dbSNP:146977371
1564 1564 a, g dbSNP:752662972
1573 1573 a, g dbSNP:374319630
1579 1579 a, g dbSNP:764185871
1590 1590 c, t dbSNP:762998209
1591 1591 g, t dbSNP:751753990
1603 1603 a, c, g, t dbSNP:759685297
1609 1609 c, t dbSNP:750788268
1612 1612 c, t dbSNP:571769665
1622 1622 c, t dbSNP:780629597
1630 1630 c, t dbSNP:748702615
1650 1650 c, t dbSNP:768180703
1653 1653 c, g dbSNP:778615243
1654 1654 c, t dbSNP:747786910
1658 1658 a, c dbSNP:771916537
1663 1663 a, g dbSNP:773076606
1666 1666 g, t dbSNP:376329242
1667 1667 g, t dbSNP:539116380
1668 1668 a, g dbSNP:776663600
1670 1670 c, g dbSNP:759435121
1675 1675 g, t dbSNP:764141225
1677 1677 g, t dbSNP:774473938
1681 1681 a, c, t dbSNP:762021232
1683 1683 a, g dbSNP:553921530
1684 1684 a, g dbSNP:756528903
1687 1687 g, t dbSNP:766689873
1688 1688 a, g dbSNP:572392003
1694 1694 -, c dbSNP:745553450
1696 1696 c, t dbSNP:755494022
1699 1699 c, g dbSNP:778562003
1701 1701 c, t dbSNP:747666789
1702 1702 a, g dbSNP:758066997
1717 1717 c, t dbSNP:777592493
1718 1718 c, t dbSNP:746742357
1752 1752 c, t dbSNP:536574354
1767 1767 c, t dbSNP:770732457
1768 1768 a, g dbSNP:776342037
1773 1773 c, t dbSNP:2229773
1774 1774 a, g dbSNP:769793497
1780 1780 a, g dbSNP:576294738
1792 1792 c, g, t dbSNP:761900323
1795 1795 a, c dbSNP:773450052
1799 1799 c, t dbSNP:760854493
1808 1808 c, t dbSNP:543619460
1811 1811 c, t dbSNP:143781383
1819 1819 c, t dbSNP:755468217
1847 1847 c, t dbSNP:752624786
1862 1862 c, g dbSNP:2229772
1864 1864 a, c, g dbSNP:758015735
1876 1876 c, t dbSNP:746653550
1887 1887 g, t dbSNP:11544351
1906 1906 c, t dbSNP:545072314
1907 1907 a, g dbSNP:781040511
1917 1917 a, g dbSNP:559919766
1918 1918 a, g dbSNP:527302805
1924 1924 c, t dbSNP:139482076
1926 1926 a, g dbSNP:190879195
1935 1935 a, g, t dbSNP:183204850
1937 1937 -, gact dbSNP:777091819
1972 1972 c, g dbSNP:760945393
1981 1981 c, t dbSNP:571460851
1985 1985 c, t dbSNP:776997866
1986 1986 a, g dbSNP:538792963
1995 1995 c, t dbSNP:765801130
1996 1996 a, g dbSNP:547849750
1997 1997 a, c dbSNP:375417623
2002 2002 a, t dbSNP:763607614
2023 2023 a, g dbSNP:747078113
2045 2045 c, t dbSNP:763649611
2055 2055 c, t dbSNP:149687193
2056 2056 a, g dbSNP:536667337
2110 2110 c, t dbSNP:780727297
2116 2116 a, g dbSNP:115635151
2129 2129 a, c dbSNP:117770216
2137 2137 a, g dbSNP:537346006
2173 2173 c, t dbSNP:749208030
2179 2179 c, g dbSNP:367819767
2190 2190 c, t dbSNP:558760636
2191 2191 g, t dbSNP:370334154
2208 2208 c, g dbSNP:200674161
2212 2212 g, t dbSNP:375909325
2213 2213 a, t dbSNP:368586881
2215 2215 -, a dbSNP:748455062
2219 2219 g, t dbSNP:771137228
2220 2220 -, g dbSNP:770479738
2221 2221 c, g dbSNP:553845872
2227 2227 g, t dbSNP:759880021
2228 2228 c, t dbSNP:770262951
2241 2241 a, c dbSNP:371896486
2259 2259 c, t dbSNP:763553004
2262 2262 g, t dbSNP:764517107
2273 2273 c, t dbSNP:751026996
2274 2274 a, g dbSNP:761257563
2306 2306 c, t dbSNP:767090750
2316 2316 a, t dbSNP:185566558
2347 2347 a, t dbSNP:755818342
2370 2370 c, t dbSNP:542645312
2464 2464 c, g dbSNP:375581332
2494 2494 -, a dbSNP:779503010
2525 2525 c, t dbSNP:777254933
2538 2538 g, t dbSNP:759983760
2550 2550 c, g, t dbSNP:190326404
2677 2677 a, c dbSNP:531673704
2699 2699 a, g dbSNP:543728371
2728 2728 c, t dbSNP:767236403
2853 2853 c, g dbSNP:564963890
2872 2872 c, t dbSNP:532360714
2874 2874 c, t dbSNP:115248059
2877 2877 a, g dbSNP:74396306
2878 2878 c, t dbSNP:182891484
2879 2879 a, g dbSNP:376581605
2880 2880 -, ca dbSNP:536023561
2881 2881 a, g dbSNP:756956672
2887 2887 -, acaa dbSNP:552625476
2888 2888 c, t dbSNP:548225262
2890 2890 a, c, g dbSNP:368001358
2947 2947 c, t dbSNP:537376620
2952 2952 -, c dbSNP:71355453
3023 3023 g, t dbSNP:558844389
3074 3074 c, t dbSNP:571021564
3087 3087 c, t dbSNP:756042544
3117 3117 a, g dbSNP:140111856
3134 3134 -, gttg dbSNP:575638278

Target ORF information:

RefSeq Version XM_005257553
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens retinoic acid receptor, alpha (RARA), transcript variant X3, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_005257553

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGCCAGCA ACAGCAGCTC CTGCCCGACA CCTGGGGGCG GGCACCTCAA TGGGTACCCG 
GTGCCTCCCT ACGCCTTCTT CTTCCCCCCT ATGCTGGGTG GACTCTCCCC GCCAGGCGCT
CTGACCACTC TCCAGCACCA GCTTCCAGTT AGTGGATATA GCACACCATC CCCAGCCACC
ATTGAGACCC AGAGCAGCAG TTCTGAAGAG ATAGTGCCCA GCCCTCCCTC GCCACCCCCT
CTACCCCGCA TCTACAAGCC TTGCTTTGTC TGTCAGGACA AGTCCTCAGG CTACCACTAT
GGGGTCAGCG CCTGTGAGGG CTGCAAGGGC TTCTTCCGCC GCAGCATCCA GAAGAACATG
GTGTACACGT GTCACCGGGA CAAGAACTGC ATCATCAACA AGGTGACCCG GAACCGCTGC
CAGTACTGCC GACTGCAGAA GTGCTTTGAA GTGGGCATGT CCAAGGAGTC TGTGAGAAAC
GACCGAAACA AGAAGAAGAA GGAGGTGCCC AAGCCCGAGT GCTCTGAGAG CTACACGCTG
ACGCCGGAGG TGGGGGAGCT CATTGAGAAG GTGCGCAAAG CGCACCAGGA AACCTTCCCT
GCCCTCTGCC AGCTGGGCAA ATACACTACG AACAACAGCT CAGAACAACG TGTCTCTCTG
GACATTGACC TCTGGGACAA GTTCAGTGAA CTCTCCACCA AGTGCATCAT TAAGACTGTG
GAGTTCGCCA AGCAGCTGCC CGGCTTCACC ACCCTCACCA TCGCCGACCA GATCACCCTC
CTCAAGGCTG CCTGCCTGGA CATCCTGATC CTGCGGATCT GCACGCGGTA CACGCCCGAG
CAGGACACCA TGACCTTCTC GGACGGGCTG ACCCTGAACC GGACCCAGAT GCACAACGCT
GGCTTCGGCC CCCTCACCGA CCTGGTCTTT GCCTTCGCCA ACCAGCTGCT GCCCCTGGAG
ATGGATGATG CGGAGACGGG GCTGCTCAGC GCCATCTGCC TCATCTGCGG AGACCGCCAG
GACCTGGAGC AGCCGGACCG GGTGGACATG CTGCAGGAGC CGCTGCTGGA GGCGCTAAAG
GTCTACGTGC GGAAGCGGAG GCCCAGCCGC CCCCACATGT TCCCCAAGAT GCTAATGAAG
ATTACTGACC TGCGAAGCAT CAGCGCCAAG GGGGCTGAGC GGGTGATCAC GCTGAAGATG
GAGATCCCGG GCTCCATGCC GCCTCTCATC CAGGAAATGT TGGAGAACTC AGAGGGCCTG
GACACTCTGA GCGGACAGCC GGGGGGTGGG GGGCGGGACG GGGGTGGCCT GGCCCCCCCG
CCAGGCAGCT GTAGCCCCAG CCTCAGCCCC AGCTCCAACA GAAGCAGCCC GGCCACCCAC
TCCCCGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu60195
Accession Version XM_011525096.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1215bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector Document: User manual_GenEZ ORF Clone Products.pdf (pdf)
Clone information Clone Map
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags Document: MSDS_GenEZ ORF Clone Products.pdf (pdf)
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product retinoic acid receptor alpha isoform X2
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_010783.16) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
ATGCCCATTG AGACCCAGAG CAGCAGTTCT GAAGAGATAG TGCCCAGCCC TCCCTCGCCA 
CCCCCTCTAC CCCGCATCTA CAAGCCTTGC TTTGTCTGTC AGGACAAGTC CTCAGGCTAC
CACTATGGGG TCAGCGCCTG TGAGGGCTGC AAGGGCTTCT TCCGCCGCAG CATCCAGAAG
AACATGGTGT ACACGTGTCA CCGGGACAAG AACTGCATCA TCAACAAGGT GACCCGGAAC
CGCTGCCAGT ACTGCCGACT GCAGAAGTGC TTTGAAGTGG GCATGTCCAA GGAGTCTGTG
AGAAACGACC GAAACAAGAA GAAGAAGGAG GTGCCCAAGC CCGAGTGCTC TGAGAGCTAC
ACGCTGACGC CGGAGGTGGG GGAGCTCATT GAGAAGGTGC GCAAAGCGCA CCAGGAAACC
TTCCCTGCCC TCTGCCAGCT GGGCAAATAC ACTACGAACA ACAGCTCAGA ACAACGTGTC
TCTCTGGACA TTGACCTCTG GGACAAGTTC AGTGAACTCT CCACCAAGTG CATCATTAAG
ACTGTGGAGT TCGCCAAGCA GCTGCCCGGC TTCACCACCC TCACCATCGC CGACCAGATC
ACCCTCCTCA AGGCTGCCTG CCTGGACATC CTGATCCTGC GGATCTGCAC GCGGTACACG
CCCGAGCAGG ACACCATGAC CTTCTCGGAC GGGCTGACCC TGAACCGGAC CCAGATGCAC
AACGCTGGCT TCGGCCCCCT CACCGACCTG GTCTTTGCCT TCGCCAACCA GCTGCTGCCC
CTGGAGATGG ATGATGCGGA GACGGGGCTG CTCAGCGCCA TCTGCCTCAT CTGCGGAGAC
CGCCAGGACC TGGAGCAGCC GGACCGGGTG GACATGCTGC AGGAGCCGCT GCTGGAGGCG
CTAAAGGTCT ACGTGCGGAA GCGGAGGCCC AGCCGCCCCC ACATGTTCCC CAAGATGCTA
ATGAAGATTA CTGACCTGCG AAGCATCAGC GCCAAGGGGG CTGAGCGGGT GATCACGCTG
AAGATGGAGA TCCCGGGCTC CATGCCGCCT CTCATCCAGG AAATGTTGGA GAACTCAGAG
GGCCTGGACA CTCTGAGCGG ACAGCCGGGG GGTGGGGGGC GGGACGGGGG TGGCCTGGCC
CCCCCGCCAG GCAGCTGTAG CCCCAGCCTC AGCCCCAGCT CCAACAGAAG CAGCCCGGCC
ACCCACTCCC CGTGA
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeqXP_011523398.1
CDS16..1230
Misc Feature(1)85..339(+)
Misc Feature(2)103..270(+)
Misc Feature(3)133..318(+)
Misc Feature(4)244..264(+)
Misc Feature(5)397..1089(+)
Misc Feature(6)523..1083(+)
Misc Feature(7)559..1080(+)
Misc Feature(8)784..999(+)
Translation
Position Chain Variation Link
12 12 a, g dbSNP:562506589
25 25 a, g dbSNP:753325918
53 53 c, t dbSNP:533798657
72 72 a, g dbSNP:2229771
76 76 c, g dbSNP:752378107
78 78 c, t dbSNP:758087141
79 79 c, g dbSNP:777603974
89 89 a, g dbSNP:751370458
90 90 c, t dbSNP:757149784
95 95 a, g dbSNP:781003431
99 99 a, g dbSNP:749331027
127 127 g, t dbSNP:768888762
138 138 c, t dbSNP:779169422
145 145 a, g dbSNP:748355308
150 150 c, t dbSNP:148477186
151 151 a, g dbSNP:773619675
178 178 c, t dbSNP:779120079
192 192 a, g dbSNP:748302448
210 210 a, g dbSNP:772273628
218 218 a, g dbSNP:367912717
232 232 a, c dbSNP:747353115
243 243 c, g dbSNP:543704273
257 257 a, g dbSNP:565178707
279 279 a, g dbSNP:760015790
282 282 a, g dbSNP:770345333
285 285 c, t dbSNP:774978534
291 291 a, c dbSNP:762461183
303 303 c, t dbSNP:763751907
305 305 a, g dbSNP:773905498
315 315 a, g dbSNP:746179870
321 321 c, t dbSNP:756501234
323 323 a, g dbSNP:780436052
326 326 a, g dbSNP:749735817
331 331 -, aag dbSNP:751811710
336 336 a, g dbSNP:769259949
339 339 a, g dbSNP:142718201
350 350 c, t dbSNP:747695319
356 356 a, c dbSNP:771789973
357 357 c, g dbSNP:543538391
358 358 c, g dbSNP:369501728
365 365 c, t dbSNP:770822935
370 370 a, g dbSNP:776543112
373 373 c, t dbSNP:759379591
377 377 c, t dbSNP:375401606
381 381 a, g dbSNP:765287704
383 383 c, t dbSNP:367821941
384 384 a, g dbSNP:376136601
386 386 c, t dbSNP:767684695
387 387 a, g dbSNP:200393055
393 393 g, t dbSNP:756376673
398 398 a, g dbSNP:79997555
401 401 c, t dbSNP:112626578
410 410 a, g dbSNP:780378953
416 416 a, g dbSNP:754292583
419 419 a, g dbSNP:755371276
422 422 c, t dbSNP:779485530
423 423 a, c, g dbSNP:113014668
426 426 a, c dbSNP:771740867
456 456 a, g dbSNP:777467407
476 476 a, g dbSNP:750455956
497 497 c, g dbSNP:540062273
514 514 c, t dbSNP:201919660
518 518 a, t dbSNP:745604036
544 544 a, t dbSNP:769597380
560 560 c, t dbSNP:775194260
564 564 a, g dbSNP:749205858
567 567 c, t dbSNP:150816475
568 568 g, t dbSNP:773208934
582 582 c, g, t dbSNP:139260459
583 583 a, g dbSNP:373673287
584 584 a, g dbSNP:200827868
594 594 c, g dbSNP:369508611
600 600 a, c dbSNP:199944788
603 603 c, t dbSNP:753171450
604 604 a, g dbSNP:758973243
606 606 c, t dbSNP:144249834
609 609 c, t dbSNP:751059985
615 615 c, t dbSNP:756853250
621 621 a, c dbSNP:768510672
645 645 c, t dbSNP:41283421
665 665 c, t dbSNP:757750800
666 666 a, g dbSNP:767037674
667 667 c, t dbSNP:786205678
675 675 a, g, t dbSNP:749963678
678 678 a, c, t dbSNP:77633370
696 696 c, g dbSNP:377203949
702 702 a, g dbSNP:370610393
705 705 c, t dbSNP:748057828
714 714 c, t dbSNP:771962505
735 735 c, t dbSNP:781328154
738 738 c, t dbSNP:745943626
747 747 c, t dbSNP:35163502
754 754 c, g dbSNP:374550237
760 760 a, g dbSNP:763372641
774 774 c, t dbSNP:769117786
777 777 c, t dbSNP:200326853
779 779 c, t dbSNP:762374504
786 786 a, g dbSNP:368477125
789 789 a, g dbSNP:767909639
794 794 a, c, g dbSNP:145829003
796 796 c, t dbSNP:371856851
810 810 c, g, t dbSNP:148999974
813 813 a, g dbSNP:778667068
818 818 c, t dbSNP:752501819
819 819 a, g dbSNP:373590342
822 822 a, g dbSNP:777589328
824 824 a, t dbSNP:777033193
828 828 c, t dbSNP:143827534
831 831 c, t dbSNP:147971091
837 837 c, t dbSNP:780324094
840 840 c, t dbSNP:749505398
846 846 c, t dbSNP:769064528
848 848 g, t dbSNP:774786141
849 849 c, t dbSNP:762097729
870 870 a, g dbSNP:140714166
875 875 c, t dbSNP:568539129
876 876 a, c, g dbSNP:74349261
880 880 a, c, t dbSNP:138717943
881 881 a, g, t dbSNP:762709825
882 882 c, g dbSNP:751435156
892 892 a, c dbSNP:757192084
893 893 a, t dbSNP:767570841
894 894 g, t dbSNP:753916674
901 901 c, t dbSNP:755139197
915 915 a, g dbSNP:201508544
927 927 c, t dbSNP:142769381
931 931 a, c dbSNP:758706699
938 938 a, g dbSNP:777998360
945 945 c, t dbSNP:747378986
947 947 a, g dbSNP:771371291
952 952 c, t dbSNP:777149587
955 955 a, c dbSNP:745346700
982 982 a, g dbSNP:769158319
995 995 a, g dbSNP:775118101
1000 1000 a, g dbSNP:376831612
1005 1005 c, t dbSNP:763804925
1006 1006 a, g dbSNP:773956341
1011 1011 a, g dbSNP:761720053
1020 1020 a, g dbSNP:146977371
1023 1023 a, g dbSNP:752662972
1032 1032 a, g dbSNP:374319630
1038 1038 a, g dbSNP:764185871
1049 1049 c, t dbSNP:762998209
1050 1050 g, t dbSNP:751753990
1062 1062 a, c, g, t dbSNP:759685297
1068 1068 c, t dbSNP:750788268
1071 1071 c, t dbSNP:571769665
1081 1081 c, t dbSNP:780629597
1089 1089 c, t dbSNP:748702615
1109 1109 c, t dbSNP:768180703
1112 1112 c, g dbSNP:778615243
1113 1113 c, t dbSNP:747786910
1117 1117 a, c dbSNP:771916537
1122 1122 a, g dbSNP:773076606
1125 1125 g, t dbSNP:376329242
1126 1126 g, t dbSNP:539116380
1127 1127 a, g dbSNP:776663600
1129 1129 c, g dbSNP:759435121
1134 1134 g, t dbSNP:764141225
1136 1136 g, t dbSNP:774473938
1140 1140 a, c, t dbSNP:762021232
1142 1142 a, g dbSNP:553921530
1143 1143 a, g dbSNP:756528903
1146 1146 g, t dbSNP:766689873
1147 1147 a, g dbSNP:572392003
1153 1153 -, c dbSNP:745553450
1155 1155 c, t dbSNP:755494022
1158 1158 c, g dbSNP:778562003
1160 1160 c, t dbSNP:747666789
1161 1161 a, g dbSNP:758066997
1176 1176 c, t dbSNP:777592493
1177 1177 c, t dbSNP:746742357
1211 1211 c, t dbSNP:536574354
1226 1226 c, t dbSNP:770732457
1227 1227 a, g dbSNP:776342037
1232 1232 c, t dbSNP:2229773
1233 1233 a, g dbSNP:769793497
1239 1239 a, g dbSNP:576294738
1251 1251 c, g, t dbSNP:761900323
1254 1254 a, c dbSNP:773450052
1258 1258 c, t dbSNP:760854493
1267 1267 c, t dbSNP:543619460
1270 1270 c, t dbSNP:143781383
1278 1278 c, t dbSNP:755468217
1306 1306 c, t dbSNP:752624786
1321 1321 c, g dbSNP:2229772
1323 1323 a, c, g dbSNP:758015735
1335 1335 c, t dbSNP:746653550
1346 1346 g, t dbSNP:11544351
1365 1365 c, t dbSNP:545072314
1366 1366 a, g dbSNP:781040511
1376 1376 a, g dbSNP:559919766
1377 1377 a, g dbSNP:527302805
1383 1383 c, t dbSNP:139482076
1385 1385 a, g dbSNP:190879195
1394 1394 a, g, t dbSNP:183204850
1396 1396 -, gact dbSNP:777091819
1431 1431 c, g dbSNP:760945393
1440 1440 c, t dbSNP:571460851
1444 1444 c, t dbSNP:776997866
1445 1445 a, g dbSNP:538792963
1454 1454 c, t dbSNP:765801130
1455 1455 a, g dbSNP:547849750
1456 1456 a, c dbSNP:375417623
1461 1461 a, t dbSNP:763607614
1482 1482 a, g dbSNP:747078113
1504 1504 c, t dbSNP:763649611
1514 1514 c, t dbSNP:149687193
1515 1515 a, g dbSNP:536667337
1569 1569 c, t dbSNP:780727297
1575 1575 a, g dbSNP:115635151
1588 1588 a, c dbSNP:117770216
1596 1596 a, g dbSNP:537346006
1632 1632 c, t dbSNP:749208030
1638 1638 c, g dbSNP:367819767
1649 1649 c, t dbSNP:558760636
1650 1650 g, t dbSNP:370334154
1667 1667 c, g dbSNP:200674161
1671 1671 g, t dbSNP:375909325
1672 1672 a, t dbSNP:368586881
1674 1674 -, a dbSNP:748455062
1678 1678 g, t dbSNP:771137228
1679 1679 -, g dbSNP:770479738
1680 1680 c, g dbSNP:553845872
1686 1686 g, t dbSNP:759880021
1687 1687 c, t dbSNP:770262951
1700 1700 a, c dbSNP:371896486
1718 1718 c, t dbSNP:763553004
1721 1721 g, t dbSNP:764517107
1732 1732 c, t dbSNP:751026996
1733 1733 a, g dbSNP:761257563
1765 1765 c, t dbSNP:767090750
1775 1775 a, t dbSNP:185566558
1806 1806 a, t dbSNP:755818342
1829 1829 c, t dbSNP:542645312
1923 1923 c, g dbSNP:375581332
1953 1953 -, a dbSNP:779503010
1984 1984 c, t dbSNP:777254933
1997 1997 g, t dbSNP:759983760
2009 2009 c, g, t dbSNP:190326404
2136 2136 a, c dbSNP:531673704
2158 2158 a, g dbSNP:543728371
2187 2187 c, t dbSNP:767236403
2312 2312 c, g dbSNP:564963890
2331 2331 c, t dbSNP:532360714
2333 2333 c, t dbSNP:115248059
2336 2336 a, g dbSNP:74396306
2337 2337 c, t dbSNP:182891484
2338 2338 a, g dbSNP:376581605
2339 2339 -, ca dbSNP:536023561
2340 2340 a, g dbSNP:756956672
2346 2346 -, acaa dbSNP:552625476
2347 2347 c, t dbSNP:548225262
2349 2349 a, c, g dbSNP:368001358
2406 2406 c, t dbSNP:537376620
2411 2411 -, c dbSNP:71355453
2482 2482 g, t dbSNP:558844389
2533 2533 c, t dbSNP:571021564
2546 2546 c, t dbSNP:756042544
2576 2576 a, g dbSNP:140111856
2593 2593 -, gttg dbSNP:575638278

Target ORF information:

RefSeq Version XM_011525096
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens retinoic acid receptor, alpha (RARA), transcript variant X4, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_011525096

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
ATGCCCATTG AGACCCAGAG CAGCAGTTCT GAAGAGATAG TGCCCAGCCC TCCCTCGCCA 
CCCCCTCTAC CCCGCATCTA CAAGCCTTGC TTTGTCTGTC AGGACAAGTC CTCAGGCTAC
CACTATGGGG TCAGCGCCTG TGAGGGCTGC AAGGGCTTCT TCCGCCGCAG CATCCAGAAG
AACATGGTGT ACACGTGTCA CCGGGACAAG AACTGCATCA TCAACAAGGT GACCCGGAAC
CGCTGCCAGT ACTGCCGACT GCAGAAGTGC TTTGAAGTGG GCATGTCCAA GGAGTCTGTG
AGAAACGACC GAAACAAGAA GAAGAAGGAG GTGCCCAAGC CCGAGTGCTC TGAGAGCTAC
ACGCTGACGC CGGAGGTGGG GGAGCTCATT GAGAAGGTGC GCAAAGCGCA CCAGGAAACC
TTCCCTGCCC TCTGCCAGCT GGGCAAATAC ACTACGAACA ACAGCTCAGA ACAACGTGTC
TCTCTGGACA TTGACCTCTG GGACAAGTTC AGTGAACTCT CCACCAAGTG CATCATTAAG
ACTGTGGAGT TCGCCAAGCA GCTGCCCGGC TTCACCACCC TCACCATCGC CGACCAGATC
ACCCTCCTCA AGGCTGCCTG CCTGGACATC CTGATCCTGC GGATCTGCAC GCGGTACACG
CCCGAGCAGG ACACCATGAC CTTCTCGGAC GGGCTGACCC TGAACCGGAC CCAGATGCAC
AACGCTGGCT TCGGCCCCCT CACCGACCTG GTCTTTGCCT TCGCCAACCA GCTGCTGCCC
CTGGAGATGG ATGATGCGGA GACGGGGCTG CTCAGCGCCA TCTGCCTCAT CTGCGGAGAC
CGCCAGGACC TGGAGCAGCC GGACCGGGTG GACATGCTGC AGGAGCCGCT GCTGGAGGCG
CTAAAGGTCT ACGTGCGGAA GCGGAGGCCC AGCCGCCCCC ACATGTTCCC CAAGATGCTA
ATGAAGATTA CTGACCTGCG AAGCATCAGC GCCAAGGGGG CTGAGCGGGT GATCACGCTG
AAGATGGAGA TCCCGGGCTC CATGCCGCCT CTCATCCAGG AAATGTTGGA GAACTCAGAG
GGCCTGGACA CTCTGAGCGG ACAGCCGGGG GGTGGGGGGC GGGACGGGGG TGGCCTGGCC
CCCCCGCCAG GCAGCTGTAG CCCCAGCCTC AGCCCCAGCT CCAACAGAAG CAGCCCGGCC
ACCCACTCCC CGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu50570
Accession Version XM_005257552.3 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1437bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector Document: User manual_GenEZ ORF Clone Products.pdf (pdf)
Clone information Clone Map
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags Document: MSDS_GenEZ ORF Clone Products.pdf (pdf)
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 12-MAR-2015
Organism Homo sapiens (human)
Product retinoic acid receptor alpha isoform X3
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_010783.16) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 12, 2015 this sequence version replaced gi:578831218. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 107 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGATGTCAC AGACAATGAC ACAAGCCGGT GTCTCATTCC GACACAGCGT CCGAGCTGCA 
CAATGTCACA CCCGGGTGCC AAACACTTGG CCCCGCGCGA CCCGGCCCTA CGCCTCCTGC
CGCCGCTCTC CGCGTCTCCG GGGGAGGTGG CCCGGTTCGG CCGGGCAGGG GGCTGGCGGG
CGAGCCCCGC GGGCGGGCTG GCGAGCGGGT GATGTCACGG GCAGCGCCAT TGAGACCCAG
AGCAGCAGTT CTGAAGAGAT AGTGCCCAGC CCTCCCTCGC CACCCCCTCT ACCCCGCATC
TACAAGCCTT GCTTTGTCTG TCAGGACAAG TCCTCAGGCT ACCACTATGG GGTCAGCGCC
TGTGAGGGCT GCAAGGGCTT CTTCCGCCGC AGCATCCAGA AGAACATGGT GTACACGTGT
CACCGGGACA AGAACTGCAT CATCAACAAG GTGACCCGGA ACCGCTGCCA GTACTGCCGA
CTGCAGAAGT GCTTTGAAGT GGGCATGTCC AAGGAGTCTG TGAGAAACGA CCGAAACAAG
AAGAAGAAGG AGGTGCCCAA GCCCGAGTGC TCTGAGAGCT ACACGCTGAC GCCGGAGGTG
GGGGAGCTCA TTGAGAAGGT GCGCAAAGCG CACCAGGAAA CCTTCCCTGC CCTCTGCCAG
CTGGGCAAAT ACACTACGAA CAACAGCTCA GAACAACGTG TCTCTCTGGA CATTGACCTC
TGGGACAAGT TCAGTGAACT CTCCACCAAG TGCATCATTA AGACTGTGGA GTTCGCCAAG
CAGCTGCCCG GCTTCACCAC CCTCACCATC GCCGACCAGA TCACCCTCCT CAAGGCTGCC
TGCCTGGACA TCCTGATCCT GCGGATCTGC ACGCGGTACA CGCCCGAGCA GGACACCATG
ACCTTCTCGG ACGGGCTGAC CCTGAACCGG ACCCAGATGC ACAACGCTGG CTTCGGCCCC
CTCACCGACC TGGTCTTTGC CTTCGCCAAC CAGCTGCTGC CCCTGGAGAT GGATGATGCG
GAGACGGGGC TGCTCAGCGC CATCTGCCTC ATCTGCGGAG ACCGCCAGGA CCTGGAGCAG
CCGGACCGGG TGGACATGCT GCAGGAGCCG CTGCTGGAGG CGCTAAAGGT CTACGTGCGG
AAGCGGAGGC CCAGCCGCCC CCACATGTTC CCCAAGATGC TAATGAAGAT TACTGACCTG
CGAAGCATCA GCGCCAAGGG GGCTGAGCGG GTGATCACGC TGAAGATGGA GATCCCGGGC
TCCATGCCGC CTCTCATCCA GGAAATGTTG GAGAACTCAG AGGGCCTGGA CACTCTGAGC
GGACAGCCGG GGGGTGGGGG GCGGGACGGG GGTGGCCTGG CCCCCCCGCC AGGCAGCTGT
AGCCCCAGCC TCAGCCCCAG CTCCAACAGA AGCAGCCCGG CCACCCACTC CCCGTGA
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeqXP_005257609.1
CDS488..1924
Misc Feature(1)779..1033(+)
Misc Feature(2)797..964(+)
Misc Feature(3)827..1012(+)
Misc Feature(4)938..958(+)
Misc Feature(5)1091..1783(+)
Misc Feature(6)1217..1777(+)
Misc Feature(7)1253..1774(+)
Misc Feature(8)1478..1693(+)
Translation
Position Chain Variation Link
20 20 c, t dbSNP:537706147
32 32 a, g dbSNP:557021088
34 34 a, c dbSNP:371645820
37 37 a, g dbSNP:374963463
65 65 g, t dbSNP:556370182
107 107 g, t dbSNP:368251590
114 114 a, g dbSNP:2920395
137 137 c, t dbSNP:372245693
163 163 -, gt dbSNP:771633183
169 169 g, t dbSNP:577754191
190 190 c, t dbSNP:377082428
216 216 c, g dbSNP:749099792
290 290 a, g, t dbSNP:560547864
303 303 a, c dbSNP:778436750
360 360 a, g dbSNP:572544218
389 389 c, t dbSNP:745471930
405 405 a, g dbSNP:543058155
413 413 a, g dbSNP:771598413
426 426 a, g dbSNP:775017481
441 441 a, g dbSNP:780256206
443 443 c, g dbSNP:369821630
451 451 g, t dbSNP:372840393
453 453 a, g dbSNP:755354465
458 458 c, t dbSNP:779432426
460 460 c, t dbSNP:748575792
463 463 c, t dbSNP:772688353
479 479 g, t dbSNP:772586888
480 480 a, c dbSNP:746587521
483 483 -, ca dbSNP:773982337
489 489 g, t dbSNP:770641325
491 491 a, g dbSNP:776437326
509 509 a, c dbSNP:759358218
511 511 a, g dbSNP:764973321
523 523 a, c dbSNP:775402747
550 550 a, g dbSNP:532035245
554 554 c, t dbSNP:550200481
557 557 a, t dbSNP:778796629
560 560 c, t dbSNP:374887586
579 579 c, t dbSNP:750435578
581 581 c, t dbSNP:756196541
585 585 c, t dbSNP:766535684
586 586 c, g dbSNP:754087849
596 596 c, t dbSNP:755230002
626 626 c, t dbSNP:779127483
631 631 -, a dbSNP:34029179
693 693 a, c dbSNP:542057035
705 705 c, g dbSNP:532579180
719 719 a, g dbSNP:753325918
747 747 c, t dbSNP:533798657
766 766 a, g dbSNP:2229771
770 770 c, g dbSNP:752378107
772 772 c, t dbSNP:758087141
773 773 c, g dbSNP:777603974
783 783 a, g dbSNP:751370458
784 784 c, t dbSNP:757149784
789 789 a, g dbSNP:781003431
793 793 a, g dbSNP:749331027
821 821 g, t dbSNP:768888762
832 832 c, t dbSNP:779169422
839 839 a, g dbSNP:748355308
844 844 c, t dbSNP:148477186
845 845 a, g dbSNP:773619675
872 872 c, t dbSNP:779120079
886 886 a, g dbSNP:748302448
904 904 a, g dbSNP:772273628
912 912 a, g dbSNP:367912717
926 926 a, c dbSNP:747353115
937 937 c, g dbSNP:543704273
951 951 a, g dbSNP:565178707
973 973 a, g dbSNP:760015790
976 976 a, g dbSNP:770345333
979 979 c, t dbSNP:774978534
985 985 a, c dbSNP:762461183
997 997 c, t dbSNP:763751907
999 999 a, g dbSNP:773905498
1009 1009 a, g dbSNP:746179870
1015 1015 c, t dbSNP:756501234
1017 1017 a, g dbSNP:780436052
1020 1020 a, g dbSNP:749735817
1025 1025 -, aag dbSNP:751811710
1030 1030 a, g dbSNP:769259949
1033 1033 a, g dbSNP:142718201
1044 1044 c, t dbSNP:747695319
1050 1050 a, c dbSNP:771789973
1051 1051 c, g dbSNP:543538391
1052 1052 c, g dbSNP:369501728
1059 1059 c, t dbSNP:770822935
1064 1064 a, g dbSNP:776543112
1067 1067 c, t dbSNP:759379591
1071 1071 c, t dbSNP:375401606
1075 1075 a, g dbSNP:765287704
1077 1077 c, t dbSNP:367821941
1078 1078 a, g dbSNP:376136601
1080 1080 c, t dbSNP:767684695
1081 1081 a, g dbSNP:200393055
1087 1087 g, t dbSNP:756376673
1092 1092 a, g dbSNP:79997555
1095 1095 c, t dbSNP:112626578
1104 1104 a, g dbSNP:780378953
1110 1110 a, g dbSNP:754292583
1113 1113 a, g dbSNP:755371276
1116 1116 c, t dbSNP:779485530
1117 1117 a, c, g dbSNP:113014668
1120 1120 a, c dbSNP:771740867
1150 1150 a, g dbSNP:777467407
1170 1170 a, g dbSNP:750455956
1191 1191 c, g dbSNP:540062273
1208 1208 c, t dbSNP:201919660
1212 1212 a, t dbSNP:745604036
1238 1238 a, t dbSNP:769597380
1254 1254 c, t dbSNP:775194260
1258 1258 a, g dbSNP:749205858
1261 1261 c, t dbSNP:150816475
1262 1262 g, t dbSNP:773208934
1276 1276 c, g, t dbSNP:139260459
1277 1277 a, g dbSNP:373673287
1278 1278 a, g dbSNP:200827868
1288 1288 c, g dbSNP:369508611
1294 1294 a, c dbSNP:199944788
1297 1297 c, t dbSNP:753171450
1298 1298 a, g dbSNP:758973243
1300 1300 c, t dbSNP:144249834
1303 1303 c, t dbSNP:751059985
1309 1309 c, t dbSNP:756853250
1315 1315 a, c dbSNP:768510672
1339 1339 c, t dbSNP:41283421
1359 1359 c, t dbSNP:757750800
1360 1360 a, g dbSNP:767037674
1361 1361 c, t dbSNP:786205678
1369 1369 a, g, t dbSNP:749963678
1372 1372 a, c, t dbSNP:77633370
1390 1390 c, g dbSNP:377203949
1396 1396 a, g dbSNP:370610393
1399 1399 c, t dbSNP:748057828
1408 1408 c, t dbSNP:771962505
1429 1429 c, t dbSNP:781328154
1432 1432 c, t dbSNP:745943626
1441 1441 c, t dbSNP:35163502
1448 1448 c, g dbSNP:374550237
1454 1454 a, g dbSNP:763372641
1468 1468 c, t dbSNP:769117786
1471 1471 c, t dbSNP:200326853
1473 1473 c, t dbSNP:762374504
1480 1480 a, g dbSNP:368477125
1483 1483 a, g dbSNP:767909639
1488 1488 a, c, g dbSNP:145829003
1490 1490 c, t dbSNP:371856851
1504 1504 c, g, t dbSNP:148999974
1507 1507 a, g dbSNP:778667068
1512 1512 c, t dbSNP:752501819
1513 1513 a, g dbSNP:373590342
1516 1516 a, g dbSNP:777589328
1518 1518 a, t dbSNP:777033193
1522 1522 c, t dbSNP:143827534
1525 1525 c, t dbSNP:147971091
1531 1531 c, t dbSNP:780324094
1534 1534 c, t dbSNP:749505398
1540 1540 c, t dbSNP:769064528
1542 1542 g, t dbSNP:774786141
1543 1543 c, t dbSNP:762097729
1564 1564 a, g dbSNP:140714166
1569 1569 c, t dbSNP:568539129
1570 1570 a, c, g dbSNP:74349261
1574 1574 a, c, t dbSNP:138717943
1575 1575 a, g, t dbSNP:762709825
1576 1576 c, g dbSNP:751435156
1586 1586 a, c dbSNP:757192084
1587 1587 a, t dbSNP:767570841
1588 1588 g, t dbSNP:753916674
1595 1595 c, t dbSNP:755139197
1609 1609 a, g dbSNP:201508544
1621 1621 c, t dbSNP:142769381
1625 1625 a, c dbSNP:758706699
1632 1632 a, g dbSNP:777998360
1639 1639 c, t dbSNP:747378986
1641 1641 a, g dbSNP:771371291
1646 1646 c, t dbSNP:777149587
1649 1649 a, c dbSNP:745346700
1676 1676 a, g dbSNP:769158319
1689 1689 a, g dbSNP:775118101
1694 1694 a, g dbSNP:376831612
1699 1699 c, t dbSNP:763804925
1700 1700 a, g dbSNP:773956341
1705 1705 a, g dbSNP:761720053
1714 1714 a, g dbSNP:146977371
1717 1717 a, g dbSNP:752662972
1726 1726 a, g dbSNP:374319630
1732 1732 a, g dbSNP:764185871
1743 1743 c, t dbSNP:762998209
1744 1744 g, t dbSNP:751753990
1756 1756 a, c, g, t dbSNP:759685297
1762 1762 c, t dbSNP:750788268
1765 1765 c, t dbSNP:571769665
1775 1775 c, t dbSNP:780629597
1783 1783 c, t dbSNP:748702615
1803 1803 c, t dbSNP:768180703
1806 1806 c, g dbSNP:778615243
1807 1807 c, t dbSNP:747786910
1811 1811 a, c dbSNP:771916537
1816 1816 a, g dbSNP:773076606
1819 1819 g, t dbSNP:376329242
1820 1820 g, t dbSNP:539116380
1821 1821 a, g dbSNP:776663600
1823 1823 c, g dbSNP:759435121
1828 1828 g, t dbSNP:764141225
1830 1830 g, t dbSNP:774473938
1834 1834 a, c, t dbSNP:762021232
1836 1836 a, g dbSNP:553921530
1837 1837 a, g dbSNP:756528903
1840 1840 g, t dbSNP:766689873
1841 1841 a, g dbSNP:572392003
1847 1847 -, c dbSNP:745553450
1849 1849 c, t dbSNP:755494022
1852 1852 c, g dbSNP:778562003
1854 1854 c, t dbSNP:747666789
1855 1855 a, g dbSNP:758066997
1870 1870 c, t dbSNP:777592493
1871 1871 c, t dbSNP:746742357
1905 1905 c, t dbSNP:536574354
1920 1920 c, t dbSNP:770732457
1921 1921 a, g dbSNP:776342037
1926 1926 c, t dbSNP:2229773
1927 1927 a, g dbSNP:769793497
1933 1933 a, g dbSNP:576294738
1945 1945 c, g, t dbSNP:761900323
1948 1948 a, c dbSNP:773450052
1952 1952 c, t dbSNP:760854493
1961 1961 c, t dbSNP:543619460
1964 1964 c, t dbSNP:143781383
1972 1972 c, t dbSNP:755468217
2000 2000 c, t dbSNP:752624786
2015 2015 c, g dbSNP:2229772
2017 2017 a, c, g dbSNP:758015735
2029 2029 c, t dbSNP:746653550
2040 2040 g, t dbSNP:11544351
2059 2059 c, t dbSNP:545072314
2060 2060 a, g dbSNP:781040511
2070 2070 a, g dbSNP:559919766
2071 2071 a, g dbSNP:527302805
2077 2077 c, t dbSNP:139482076
2079 2079 a, g dbSNP:190879195
2088 2088 a, g, t dbSNP:183204850
2090 2090 -, gact dbSNP:777091819
2125 2125 c, g dbSNP:760945393
2134 2134 c, t dbSNP:571460851
2138 2138 c, t dbSNP:776997866
2139 2139 a, g dbSNP:538792963
2148 2148 c, t dbSNP:765801130
2149 2149 a, g dbSNP:547849750
2150 2150 a, c dbSNP:375417623
2155 2155 a, t dbSNP:763607614
2176 2176 a, g dbSNP:747078113
2198 2198 c, t dbSNP:763649611
2208 2208 c, t dbSNP:149687193
2209 2209 a, g dbSNP:536667337
2263 2263 c, t dbSNP:780727297
2269 2269 a, g dbSNP:115635151
2282 2282 a, c dbSNP:117770216
2290 2290 a, g dbSNP:537346006
2326 2326 c, t dbSNP:749208030
2332 2332 c, g dbSNP:367819767
2343 2343 c, t dbSNP:558760636
2344 2344 g, t dbSNP:370334154
2361 2361 c, g dbSNP:200674161
2365 2365 g, t dbSNP:375909325
2366 2366 a, t dbSNP:368586881
2368 2368 -, a dbSNP:748455062
2372 2372 g, t dbSNP:771137228
2373 2373 -, g dbSNP:770479738
2374 2374 c, g dbSNP:553845872
2380 2380 g, t dbSNP:759880021
2381 2381 c, t dbSNP:770262951
2394 2394 a, c dbSNP:371896486
2412 2412 c, t dbSNP:763553004
2415 2415 g, t dbSNP:764517107
2426 2426 c, t dbSNP:751026996
2427 2427 a, g dbSNP:761257563
2459 2459 c, t dbSNP:767090750
2469 2469 a, t dbSNP:185566558
2500 2500 a, t dbSNP:755818342
2523 2523 c, t dbSNP:542645312
2617 2617 c, g dbSNP:375581332
2647 2647 -, a dbSNP:779503010
2678 2678 c, t dbSNP:777254933
2691 2691 g, t dbSNP:759983760
2703 2703 c, g, t dbSNP:190326404
2830 2830 a, c dbSNP:531673704
2852 2852 a, g dbSNP:543728371
2881 2881 c, t dbSNP:767236403
3006 3006 c, g dbSNP:564963890
3025 3025 c, t dbSNP:532360714
3027 3027 c, t dbSNP:115248059
3030 3030 a, g dbSNP:74396306
3031 3031 c, t dbSNP:182891484
3032 3032 a, g dbSNP:376581605
3033 3033 -, ca dbSNP:536023561
3034 3034 a, g dbSNP:756956672
3040 3040 -, acaa dbSNP:552625476
3041 3041 c, t dbSNP:548225262
3043 3043 a, c, g dbSNP:368001358
3100 3100 c, t dbSNP:537376620
3105 3105 -, c dbSNP:71355453
3176 3176 g, t dbSNP:558844389
3227 3227 c, t dbSNP:571021564
3240 3240 c, t dbSNP:756042544
3270 3270 a, g dbSNP:140111856
3287 3287 -, gttg dbSNP:575638278

Target ORF information:

RefSeq Version XM_005257552
Organism Homo sapiens (human)
Definition PREDICTED: Homo sapiens retinoic acid receptor, alpha (RARA), transcript variant X5, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_005257552

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGATGTCAC AGACAATGAC ACAAGCCGGT GTCTCATTCC GACACAGCGT CCGAGCTGCA 
CAATGTCACA CCCGGGTGCC AAACACTTGG CCCCGCGCGA CCCGGCCCTA CGCCTCCTGC
CGCCGCTCTC CGCGTCTCCG GGGGAGGTGG CCCGGTTCGG CCGGGCAGGG GGCTGGCGGG
CGAGCCCCGC GGGCGGGCTG GCGAGCGGGT GATGTCACGG GCAGCGCCAT TGAGACCCAG
AGCAGCAGTT CTGAAGAGAT AGTGCCCAGC CCTCCCTCGC CACCCCCTCT ACCCCGCATC
TACAAGCCTT GCTTTGTCTG TCAGGACAAG TCCTCAGGCT ACCACTATGG GGTCAGCGCC
TGTGAGGGCT GCAAGGGCTT CTTCCGCCGC AGCATCCAGA AGAACATGGT GTACACGTGT
CACCGGGACA AGAACTGCAT CATCAACAAG GTGACCCGGA ACCGCTGCCA GTACTGCCGA
CTGCAGAAGT GCTTTGAAGT GGGCATGTCC AAGGAGTCTG TGAGAAACGA CCGAAACAAG
AAGAAGAAGG AGGTGCCCAA GCCCGAGTGC TCTGAGAGCT ACACGCTGAC GCCGGAGGTG
GGGGAGCTCA TTGAGAAGGT GCGCAAAGCG CACCAGGAAA CCTTCCCTGC CCTCTGCCAG
CTGGGCAAAT ACACTACGAA CAACAGCTCA GAACAACGTG TCTCTCTGGA CATTGACCTC
TGGGACAAGT TCAGTGAACT CTCCACCAAG TGCATCATTA AGACTGTGGA GTTCGCCAAG
CAGCTGCCCG GCTTCACCAC CCTCACCATC GCCGACCAGA TCACCCTCCT CAAGGCTGCC
TGCCTGGACA TCCTGATCCT GCGGATCTGC ACGCGGTACA CGCCCGAGCA GGACACCATG
ACCTTCTCGG ACGGGCTGAC CCTGAACCGG ACCCAGATGC ACAACGCTGG CTTCGGCCCC
CTCACCGACC TGGTCTTTGC CTTCGCCAAC CAGCTGCTGC CCCTGGAGAT GGATGATGCG
GAGACGGGGC TGCTCAGCGC CATCTGCCTC ATCTGCGGAG ACCGCCAGGA CCTGGAGCAG
CCGGACCGGG TGGACATGCT GCAGGAGCCG CTGCTGGAGG CGCTAAAGGT CTACGTGCGG
AAGCGGAGGC CCAGCCGCCC CCACATGTTC CCCAAGATGC TAATGAAGAT TACTGACCTG
CGAAGCATCA GCGCCAAGGG GGCTGAGCGG GTGATCACGC TGAAGATGGA GATCCCGGGC
TCCATGCCGC CTCTCATCCA GGAAATGTTG GAGAACTCAG AGGGCCTGGA CACTCTGAGC
GGACAGCCGG GGGGTGGGGG GCGGGACGGG GGTGGCCTGG CCCCCCCGCC AGGCAGCTGT
AGCCCCAGCC TCAGCCCCAG CTCCAACAGA AGCAGCCCGG CCACCCACTC CCCGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu21799
Accession Version NM_001024809.3 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1374bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector Document: User manual_GenEZ ORF Clone Products.pdf (pdf)
Clone information Clone Map
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags Document: MSDS_GenEZ ORF Clone Products.pdf (pdf)
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear Document: OHu21799D_COA.pdf (pdf)
Update Date 15-MAR-2015
Organism Homo sapiens (human)
Product retinoic acid receptor alpha isoform 2
Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from CB105313.1, BM838347.1, BC071733.1, AC080112.15 and BM992549.1. On Jul 9, 2010 this sequence version replaced gi:75812905. Summary: This gene represents a nuclear retinoic acid receptor. The encoded protein, retinoic acid receptor alpha, regulates transcription in a ligand-dependent manner. This gene has been implicated in regulation of development, differentiation, apoptosis, granulopoeisis, and transcription of clock genes. Translocations between this locus and several other loci have been associated with acute promyelocytic leukemia. Alternatively spliced transcript variants have been found for this locus.[provided by RefSeq, Sep 2010]. Transcript Variant: This variant (2) reflects the use of an alternate promoter and has a distinct 5' exon, compared to transcript variant 1. Translation is predicted to initiate from this alternate exon, and the resulting protein (isoform 2) has a shorter and a distinct N-terminus compared to isoform 1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AL834159.1, BC071733.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
ATGTACGAGA GTGTAGAAGT GGGGGGTCCC ACCCCTAATC CCTTCCTAGT GGTGGATTTT 
TATAACCAGA ACCGGGCCTG TTTGCTCCCA GAGAAGGGGC TCCCCGCCCC GGGTCCGTAC
TCCACCCCGC TCCGGACTCC GCTTTGGAAT GGCTCAAACC ACTCCATTGA GACCCAGAGC
AGCAGTTCTG AAGAGATAGT GCCCAGCCCT CCCTCGCCAC CCCCTCTACC CCGCATCTAC
AAGCCTTGCT TTGTCTGTCA GGACAAGTCC TCAGGCTACC ACTATGGGGT CAGCGCCTGT
GAGGGCTGCA AGGGCTTCTT CCGCCGCAGC ATCCAGAAGA ACATGGTGTA CACGTGTCAC
CGGGACAAGA ACTGCATCAT CAACAAGGTG ACCCGGAACC GCTGCCAGTA CTGCCGACTG
CAGAAGTGCT TTGAAGTGGG CATGTCCAAG GAGTCTGTGA GAAACGACCG AAACAAGAAG
AAGAAGGAGG TGCCCAAGCC CGAGTGCTCT GAGAGCTACA CGCTGACGCC GGAGGTGGGG
GAGCTCATTG AGAAGGTGCG CAAAGCGCAC CAGGAAACCT TCCCTGCCCT CTGCCAGCTG
GGCAAATACA CTACGAACAA CAGCTCAGAA CAACGTGTCT CTCTGGACAT TGACCTCTGG
GACAAGTTCA GTGAACTCTC CACCAAGTGC ATCATTAAGA CTGTGGAGTT CGCCAAGCAG
CTGCCCGGCT TCACCACCCT CACCATCGCC GACCAGATCA CCCTCCTCAA GGCTGCCTGC
CTGGACATCC TGATCCTGCG GATCTGCACG CGGTACACGC CCGAGCAGGA CACCATGACC
TTCTCGGACG GGCTGACCCT GAACCGGACC CAGATGCACA ACGCTGGCTT CGGCCCCCTC
ACCGACCTGG TCTTTGCCTT CGCCAACCAG CTGCTGCCCC TGGAGATGGA TGATGCGGAG
ACGGGGCTGC TCAGCGCCAT CTGCCTCATC TGCGGAGACC GCCAGGACCT GGAGCAGCCG
GACCGGGTGG ACATGCTGCA GGAGCCGCTG CTGGAGGCGC TAAAGGTCTA CGTGCGGAAG
CGGAGGCCCA GCCGCCCCCA CATGTTCCCC AAGATGCTAA TGAAGATTAC TGACCTGCGA
AGCATCAGCG CCAAGGGGGC TGAGCGGGTG ATCACGCTGA AGATGGAGAT CCCGGGCTCC
ATGCCGCCTC TCATCCAGGA AATGTTGGAG AACTCAGAGG GCCTGGACAC TCTGAGCGGA
CAGCCGGGGG GTGGGGGGCG GGACGGGGGT GGCCTGGCCC CCCCGCCAGG CAGCTGTAGC
CCCAGCCTCA GCCCCAGCTC CAACAGAAGC AGCCCGGCCA CCCACTCCCC GTGA
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeqNP_001019980.1
CDS687..2060
Misc Feature(1)630..632(+)
Misc Feature(2)915..1169(+)
Misc Feature(3)933..1100(+)
Misc Feature(4)963..1148(+)
Misc Feature(5)1074..1094(+)
Misc Feature(6)1227..1919(+)
Misc Feature(7)1353..1913(+)
Misc Feature(8)1389..1910(+)
Misc Feature(9)1614..1829(+)
Exon (1)1..849
Gene:RARA
Gene Synonym:
Exon (2)850..998
Gene:RARA
Gene Synonym:
Exon (3)999..1140
Gene:RARA
Gene Synonym:
Exon (4)1141..1301
Gene:RARA
Gene Synonym:
Exon (5)1302..1478
Gene:RARA
Gene Synonym:
Exon (6)1479..1683
Gene:RARA
Gene Synonym:
Exon (7)1684..1842
Gene:RARA
Gene Synonym:
Exon (8)1843..3477
Gene:RARA
Gene Synonym:
Translation
Position Chain Variation Link
9 9 c, g dbSNP:572579838
11 11 c, t dbSNP:543094742
13 13 c, t dbSNP:376171160
21 21 c, t dbSNP:552545524
27 27 c, t dbSNP:775397853
100 100 a, t dbSNP:561381266
134 134 c, g, t dbSNP:535904098
178 178 a, g dbSNP:565416803
286 286 a, g dbSNP:532807349
294 294 c, t dbSNP:547596073
359 359 a, g dbSNP:112359597
372 372 c, t dbSNP:367986970
446 446 c, t dbSNP:559474074
458 458 a, c dbSNP:181948756
459 459 c, g dbSNP:548661374
491 491 a, c dbSNP:567290761
526 526 g, t dbSNP:531188503
545 545 a, g dbSNP:549723980
633 633 c, t dbSNP:553022055
638 638 g, t dbSNP:746461208
642 642 c, t dbSNP:770589965
654 654 c, t dbSNP:780953729
658 658 c, g dbSNP:745492680
662 662 c, g dbSNP:769542168
667 667 g, t dbSNP:775143194
671 671 c, g dbSNP:762810655
682 682 c, g dbSNP:768416418
683 683 a, g dbSNP:774290249
691 691 a, t dbSNP:760702990
692 692 c, t dbSNP:766412651
695 695 c, g dbSNP:753970911
697 697 c, g dbSNP:759666188
700 700 c, t dbSNP:571464666
705 705 g, t dbSNP:149514124
706 706 -, g dbSNP:776808327
708 708 a, g dbSNP:758804805
709 709 a, g dbSNP:572850293
712 712 a, g dbSNP:778093184
716 716 c, t dbSNP:752145416
721 721 c, t dbSNP:374297174
731 731 c, t dbSNP:757880863
735 735 c, g dbSNP:780835015
736 736 c, t dbSNP:745436080
746 746 g, t dbSNP:769262761
748 748 a, g dbSNP:779768382
759 759 a, c, g, t dbSNP:748984306
767 767 c, t dbSNP:761712694
770 770 a, g dbSNP:772058240
776 776 a, c dbSNP:776689631
781 781 a, g dbSNP:759669684
790 790 c, t dbSNP:554009879
792 792 a, c, g dbSNP:752986550
799 799 c, g dbSNP:370534498
805 805 a, g dbSNP:764523968
806 806 c, t dbSNP:752026996
810 810 a, t dbSNP:757833743
812 812 c, t dbSNP:768143191
813 813 c, t dbSNP:202229958
814 814 c, t dbSNP:755669225
816 816 a, c, t dbSNP:779528914
818 818 c, g dbSNP:185276091
822 822 a, c dbSNP:778668953
825 825 c, g dbSNP:746496388
828 828 a, c dbSNP:748005142
848 848 c, t dbSNP:771933711
855 855 a, g dbSNP:753325918
883 883 c, t dbSNP:533798657
902 902 a, g dbSNP:2229771
906 906 c, g dbSNP:752378107
908 908 c, t dbSNP:758087141
909 909 c, g dbSNP:777603974
919 919 a, g dbSNP:751370458
920 920 c, t dbSNP:757149784
925 925 a, g dbSNP:781003431
929 929 a, g dbSNP:749331027
957 957 g, t dbSNP:768888762
968 968 c, t dbSNP:779169422
975 975 a, g dbSNP:748355308
980 980 c, t dbSNP:148477186
981 981 a, g dbSNP:773619675
1008 1008 c, t dbSNP:779120079
1022 1022 a, g dbSNP:748302448
1040 1040 a, g dbSNP:772273628
1048 1048 a, g dbSNP:367912717
1062 1062 a, c dbSNP:747353115
1073 1073 c, g dbSNP:543704273
1087 1087 a, g dbSNP:565178707
1109 1109 a, g dbSNP:760015790
1112 1112 a, g dbSNP:770345333
1115 1115 c, t dbSNP:774978534
1121 1121 a, c dbSNP:762461183
1133 1133 c, t dbSNP:763751907
1135 1135 a, g dbSNP:773905498
1145 1145 a, g dbSNP:746179870
1151 1151 c, t dbSNP:756501234
1153 1153 a, g dbSNP:780436052
1156 1156 a, g dbSNP:749735817
1161 1161 -, aag dbSNP:751811710
1166 1166 a, g dbSNP:769259949
1169 1169 a, g dbSNP:142718201
1180 1180 c, t dbSNP:747695319
1186 1186 a, c dbSNP:771789973
1187 1187 c, g dbSNP:543538391
1188 1188 c, g dbSNP:369501728
1195 1195 c, t dbSNP:770822935
1200 1200 a, g dbSNP:776543112
1203 1203 c, t dbSNP:759379591
1207 1207 c, t dbSNP:375401606
1211 1211 a, g dbSNP:765287704
1213 1213 c, t dbSNP:367821941
1214 1214 a, g dbSNP:376136601
1216 1216 c, t dbSNP:767684695
1217 1217 a, g dbSNP:200393055
1223 1223 g, t dbSNP:756376673
1228 1228 a, g dbSNP:79997555
1231 1231 c, t dbSNP:112626578
1240 1240 a, g dbSNP:780378953
1246 1246 a, g dbSNP:754292583
1249 1249 a, g dbSNP:755371276
1252 1252 c, t dbSNP:779485530
1253 1253 a, c, g dbSNP:113014668
1256 1256 a, c dbSNP:771740867
1286 1286 a, g dbSNP:777467407
1306 1306 a, g dbSNP:750455956
1327 1327 c, g dbSNP:540062273
1344 1344 c, t dbSNP:201919660
1348 1348 a, t dbSNP:745604036
1374 1374 a, t dbSNP:769597380
1390 1390 c, t dbSNP:775194260
1394 1394 a, g dbSNP:749205858
1397 1397 c, t dbSNP:150816475
1398 1398 g, t dbSNP:773208934
1412 1412 c, g, t dbSNP:139260459
1413 1413 a, g dbSNP:373673287
1414 1414 a, g dbSNP:200827868
1424 1424 c, g dbSNP:369508611
1430 1430 a, c dbSNP:199944788
1433 1433 c, t dbSNP:753171450
1434 1434 a, g dbSNP:758973243
1436 1436 c, t dbSNP:144249834
1439 1439 c, t dbSNP:751059985
1445 1445 c, t dbSNP:756853250
1451 1451 a, c dbSNP:768510672
1475 1475 c, t dbSNP:41283421
1495 1495 c, t dbSNP:757750800
1496 1496 a, g dbSNP:767037674
1497 1497 c, t dbSNP:786205678
1505 1505 a, g, t dbSNP:749963678
1508 1508 a, c, t dbSNP:77633370
1526 1526 c, g dbSNP:377203949
1532 1532 a, g dbSNP:370610393
1535 1535 c, t dbSNP:748057828
1544 1544 c, t dbSNP:771962505
1565 1565 c, t dbSNP:781328154
1568 1568 c, t dbSNP:745943626
1577 1577 c, t dbSNP:35163502
1584 1584 c, g dbSNP:374550237
1590 1590 a, g dbSNP:763372641
1604 1604 c, t dbSNP:769117786
1607 1607 c, t dbSNP:200326853
1609 1609 c, t dbSNP:762374504
1616 1616 a, g dbSNP:368477125
1619 1619 a, g dbSNP:767909639
1624 1624 a, c, g dbSNP:145829003
1626 1626 c, t dbSNP:371856851
1640 1640 c, g, t dbSNP:148999974
1643 1643 a, g dbSNP:778667068
1648 1648 c, t dbSNP:752501819
1649 1649 a, g dbSNP:373590342
1652 1652 a, g dbSNP:777589328
1654 1654 a, t dbSNP:777033193
1658 1658 c, t dbSNP:143827534
1661 1661 c, t dbSNP:147971091
1667 1667 c, t dbSNP:780324094
1670 1670 c, t dbSNP:749505398
1676 1676 c, t dbSNP:769064528
1678 1678 g, t dbSNP:774786141
1679 1679 c, t dbSNP:762097729
1700 1700 a, g dbSNP:140714166
1705 1705 c, t dbSNP:568539129
1706 1706 a, c, g dbSNP:74349261
1710 1710 a, c, t dbSNP:138717943
1711 1711 a, g, t dbSNP:762709825
1712 1712 c, g dbSNP:751435156
1722 1722 a, c dbSNP:757192084
1723 1723 a, t dbSNP:767570841
1724 1724 g, t dbSNP:753916674
1731 1731 c, t dbSNP:755139197
1745 1745 a, g dbSNP:201508544
1757 1757 c, t dbSNP:142769381
1761 1761 a, c dbSNP:758706699
1768 1768 a, g dbSNP:777998360
1775 1775 c, t dbSNP:747378986
1777 1777 a, g dbSNP:771371291
1782 1782 c, t dbSNP:777149587
1785 1785 a, c dbSNP:745346700
1812 1812 a, g dbSNP:769158319
1825 1825 a, g dbSNP:775118101
1830 1830 a, g dbSNP:376831612
1835 1835 c, t dbSNP:763804925
1836 1836 a, g dbSNP:773956341
1841 1841 a, g dbSNP:761720053
1850 1850 a, g dbSNP:146977371
1853 1853 a, g dbSNP:752662972
1862 1862 a, g dbSNP:374319630
1868 1868 a, g dbSNP:764185871
1879 1879 c, t dbSNP:762998209
1880 1880 g, t dbSNP:751753990
1892 1892 a, c, g, t dbSNP:759685297
1898 1898 c, t dbSNP:750788268
1901 1901 c, t dbSNP:571769665
1911 1911 c, t dbSNP:780629597
1919 1919 c, t dbSNP:748702615
1939 1939 c, t dbSNP:768180703
1942 1942 c, g dbSNP:778615243
1943 1943 c, t dbSNP:747786910
1947 1947 a, c dbSNP:771916537
1952 1952 a, g dbSNP:773076606
1955 1955 g, t dbSNP:376329242
1956 1956 g, t dbSNP:539116380
1957 1957 a, g dbSNP:776663600
1959 1959 c, g dbSNP:759435121
1964 1964 g, t dbSNP:764141225
1966 1966 g, t dbSNP:774473938
1970 1970 a, c, t dbSNP:762021232
1972 1972 a, g dbSNP:553921530
1973 1973 a, g dbSNP:756528903
1976 1976 g, t dbSNP:766689873
1977 1977 a, g dbSNP:572392003
1983 1983 -, c dbSNP:745553450
1985 1985 c, t dbSNP:755494022
1988 1988 c, g dbSNP:778562003
1990 1990 c, t dbSNP:747666789
1991 1991 a, g dbSNP:758066997
2006 2006 c, t dbSNP:777592493
2007 2007 c, t dbSNP:746742357
2041 2041 c, t dbSNP:536574354
2056 2056 c, t dbSNP:770732457
2057 2057 a, g dbSNP:776342037
2062 2062 c, t dbSNP:2229773
2063 2063 a, g dbSNP:769793497
2069 2069 a, g dbSNP:576294738
2081 2081 c, g, t dbSNP:761900323
2084 2084 a, c dbSNP:773450052
2088 2088 c, t dbSNP:760854493
2097 2097 c, t dbSNP:543619460
2100 2100 c, t dbSNP:143781383
2108 2108 c, t dbSNP:755468217
2136 2136 c, t dbSNP:752624786
2151 2151 c, g dbSNP:2229772
2153 2153 a, c, g dbSNP:758015735
2165 2165 c, t dbSNP:746653550
2176 2176 g, t dbSNP:11544351
2195 2195 c, t dbSNP:545072314
2196 2196 a, g dbSNP:781040511
2206 2206 a, g dbSNP:559919766
2207 2207 a, g dbSNP:527302805
2213 2213 c, t dbSNP:139482076
2215 2215 a, g dbSNP:190879195
2224 2224 a, g, t dbSNP:183204850
2226 2226 -, gact dbSNP:777091819
2261 2261 c, g dbSNP:760945393
2270 2270 c, t dbSNP:571460851
2274 2274 c, t dbSNP:776997866
2275 2275 a, g dbSNP:538792963
2284 2284 c, t dbSNP:765801130
2285 2285 a, g dbSNP:547849750
2286 2286 a, c dbSNP:375417623
2291 2291 a, t dbSNP:763607614
2312 2312 a, g dbSNP:747078113
2334 2334 c, t dbSNP:763649611
2344 2344 c, t dbSNP:149687193
2345 2345 a, g dbSNP:536667337
2399 2399 c, t dbSNP:780727297
2405 2405 a, g dbSNP:115635151
2418 2418 a, c dbSNP:117770216
2426 2426 a, g dbSNP:537346006
2462 2462 c, t dbSNP:749208030
2468 2468 c, g dbSNP:367819767
2479 2479 c, t dbSNP:558760636
2480 2480 g, t dbSNP:370334154
2497 2497 c, g dbSNP:200674161
2501 2501 g, t dbSNP:375909325
2502 2502 a, t dbSNP:368586881
2504 2504 -, a dbSNP:748455062
2508 2508 g, t dbSNP:771137228
2509 2509 -, g dbSNP:770479738
2510 2510 c, g dbSNP:553845872
2516 2516 g, t dbSNP:759880021
2517 2517 c, t dbSNP:770262951
2530 2530 a, c dbSNP:371896486
2548 2548 c, t dbSNP:763553004
2551 2551 g, t dbSNP:764517107
2562 2562 c, t dbSNP:751026996
2563 2563 a, g dbSNP:761257563
2595 2595 c, t dbSNP:767090750
2605 2605 a, t dbSNP:185566558
2636 2636 a, t dbSNP:755818342
2659 2659 c, t dbSNP:542645312
2753 2753 c, g dbSNP:375581332
2783 2783 -, a dbSNP:779503010
2814 2814 c, t dbSNP:777254933
2827 2827 g, t dbSNP:759983760
2839 2839 c, g, t dbSNP:190326404
2966 2966 a, c dbSNP:531673704
2988 2988 a, g dbSNP:543728371
3017 3017 c, t dbSNP:767236403
3142 3142 c, g dbSNP:564963890
3161 3161 c, t dbSNP:532360714
3163 3163 c, t dbSNP:115248059
3166 3166 a, g dbSNP:74396306
3167 3167 c, t dbSNP:182891484
3168 3168 a, g dbSNP:376581605
3169 3169 -, ca dbSNP:536023561
3170 3170 a, g dbSNP:756956672
3176 3176 -, acaa dbSNP:552625476
3177