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Ppara cDNA ORF clone, Mus musculus (house mouse)

Gene Symbol Ppara
Entrez Gene ID 19013
Full Name peroxisome proliferator activated receptor alpha
Synonyms 4933429D07Rik, AW742785, Nr1c1, PPAR-alpha, PPARalpha, Ppar
General protein information
Preferred Names
peroxisome proliferator-activated receptor alpha
Names
peroxisome proliferator-activated receptor alpha
nuclear receptor subfamily 1 group C member 1
Gene Type protein-coding
Organism Mus musculus (house mouse)
Genome

15

15 E2|15 40.42 cM

Summary lac of sum

mRNA and Protein(s)

mRNA Protein Name
XM_011245516 XP_011243818 peroxisome proliferator-activated receptor alpha isoform X1
XM_006520619 XP_006520682 peroxisome proliferator-activated receptor alpha isoform X1
XM_006520620 XP_006520683 peroxisome proliferator-activated receptor alpha isoform X1
XM_011245517 XP_011243819 peroxisome proliferator-activated receptor alpha isoform X1
XM_011245518 XP_011243820 peroxisome proliferator-activated receptor alpha isoform X1
XM_011245519 XP_011243821 peroxisome proliferator-activated receptor alpha isoform X1
XM_006520621 XP_006520684 peroxisome proliferator-activated receptor alpha isoform X1
XM_006520622 XP_006520685 peroxisome proliferator-activated receptor alpha isoform X1
XM_006520623 XP_006520686 peroxisome proliferator-activated receptor alpha isoform X1
XM_006520624 XP_006520687 peroxisome proliferator-activated receptor alpha isoform X2
NM_011144 NP_035274 peroxisome proliferator-activated receptor alpha
NM_001113418 NP_001106889 peroxisome proliferator-activated receptor alpha



Homo sapiens (human) PPARA NP_001001928.1
Pan troglodytes (chimpanzee) PPARA XP_001136470.1
Macaca mulatta (Rhesus monkey) PPARA NP_001028201.1
Canis lupus familiaris (dog) PPARA NP_001003093.1
Bos taurus (cattle) PPARA NP_001029208.1
Mus musculus (house mouse) Ppara NP_001106889.1
Rattus norvegicus (Norway rat) Ppara NP_037328.1
Gallus gallus (chicken) PPARA NP_001001464.1
Danio rerio (zebrafish) pparab NP_001096037.1
Danio rerio (zebrafish) LOC100534818 XP_003201422.1
Xenopus (Silurana) tropicalis (western clawed frog) LOC100497346 XP_002940784.2


GeneRIFs: Gene References Into Functions What's a GeneRIF?

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

The following Ppara gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ppara cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID RefSeq Accession Definition **Vector *Turnaround time Price Select
OMu22504 XM_011245516 PREDICTED: Mus musculus peroxisome proliferator activated receptor alpha (Ppara), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $223.30
$319.00
OMu22504 XM_006520619 PREDICTED: Mus musculus peroxisome proliferator activated receptor alpha (Ppara), transcript variant X2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $223.30
$319.00
OMu22504 XM_006520620 PREDICTED: Mus musculus peroxisome proliferator activated receptor alpha (Ppara), transcript variant X3, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $223.30
$319.00
OMu22504 XM_011245517 PREDICTED: Mus musculus peroxisome proliferator activated receptor alpha (Ppara), transcript variant X4, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $223.30
$319.00
OMu22504 XM_011245518 PREDICTED: Mus musculus peroxisome proliferator activated receptor alpha (Ppara), transcript variant X5, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $223.30
$319.00
OMu22504 XM_011245519 PREDICTED: Mus musculus peroxisome proliferator activated receptor alpha (Ppara), transcript variant X6, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $223.30
$319.00
OMu22504 XM_006520621 PREDICTED: Mus musculus peroxisome proliferator activated receptor alpha (Ppara), transcript variant X7, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $223.30
$319.00
OMu22504 XM_006520622 PREDICTED: Mus musculus peroxisome proliferator activated receptor alpha (Ppara), transcript variant X8, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $223.30
$319.00
OMu22504 XM_006520623 PREDICTED: Mus musculus peroxisome proliferator activated receptor alpha (Ppara), transcript variant X9, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $223.30
$319.00
OMu51072 XM_006520624 PREDICTED: Mus musculus peroxisome proliferator activated receptor alpha (Ppara), transcript variant X10, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $223.30
$319.00
OMu22504 NM_011144 Mus musculus peroxisome proliferator activated receptor alpha (Ppara), transcript variant 1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $223.30
$319.00
OMu22504 NM_001113418 Mus musculus peroxisome proliferator activated receptor alpha (Ppara), transcript variant 2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $223.30
$319.00
Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.


CloneID OMu22504
Clone ID Related Accession (Same CDS sequence) NM_001113418 , NM_011144 , XM_006520619 , XM_006520620 , XM_006520621 , XM_006520622 , XM_006520623 , XM_011245516 , XM_011245517 , XM_011245518 , XM_011245519
Accession Version XM_011245516.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1407bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 09-FEB-2015
Organism Mus musculus (house mouse)
Product peroxisome proliferator-activated receptor alpha isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_039621.8) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGTGGACA CAGAGAGCCC CATCTGTCCT CTCTCCCCAC TGGAGGCAGA TGACCTGGAA 
AGTCCCTTAT CTGAAGAATT CTTACAAGAA ATGGGAAACA TTCAAGAGAT TTCTCAGTCC
ATCGGTGAGG AGAGCTCTGG AAGCTTTGGT TTTGCAGACT ACCAGTACTT AGGAAGCTGT
CCGGGCTCCG AGGGCTCTGT CATCACAGAC ACCCTCTCTC CAGCTTCCAG CCCTTCCTCA
GTCAGCTGCC CCGTGATCCC CGCCAGCACG GACGAGTCCC CCGGCAGTGC CCTGAACATC
GAGTGTCGAA TATGTGGGGA CAAGGCCTCA GGGTACCACT ACGGAGTTCA CGCATGTGAA
GGCTGTAAGG GCTTCTTTCG GCGAACTATT CGGCTGAAGC TGGTGTACGA CAAGTGTGAT
CGGAGCTGCA AGATTCAGAA GAAGAACCGG AACAAATGCC AGTACTGCCG TTTTCACAAG
TGCCTGTCTG TCGGGATGTC ACACAATGCA ATTCGCTTTG GAAGAATGCC AAGATCTGAA
AAAGCAAAAC TGAAAGCAGA AATTCTTACC TGTGAACACG ACCTGAAAGA TTCGGAAACT
GCAGACCTCA AATCTCTGGG CAAGAGAATC CACGAAGCCT ACCTGAAGAA CTTCAACATG
AACAAGGTCA AGGCCCGGGT CATACTCGCG GGAAAGACCA GCAACAACCC GCCTTTTGTC
ATACATGACA TGGAGACCTT GTGTATGGCC GAGAAGACGC TTGTGGCCAA GATGGTGGCC
AACGGCGTCG AAGACAAAGA GGCAGAGGTC CGATTCTTCC ACTGCTGCCA GTGCATGTCC
GTGGAGACCG TCACGGAGCT CACAGAATTT GCCAAGGCTA TCCCAGGCTT TGCAAACTTG
GACTTGAACG ACCAAGTCAC CTTGCTAAAG TACGGTGTGT ATGAAGCCAT CTTCACGATG
CTGTCCTCCT TGATGAACAA AGACGGGATG CTGATCGCGT ACGGCAATGG CTTTATCACA
CGCGAGTTCC TTAAGAACCT GAGGAAGCCG TTCTGTGACA TCATGGAACC CAAGTTTGAC
TTCGCTATGA AGTTCAATGC CTTAGAACTG GATGACAGTG ACATTTCCCT GTTTGTGGCT
GCTATAATTT GCTGTGGAGA TCGGCCTGGC CTTCTAAACA TAGGCTACAT TGAGAAGTTG
CAGGAGGGGA TTGTGCACGT GCTTAAGCTC CACCTGCAGA GCAACCATCC AGATGACACC
TTCCTCTTCC CAAAGCTCCT TCAAAAAATG GTGGACCTTC GGCAGCTGGT CACGGAGCAT
GCGCAGCTCG TACAGGTCAT CAAGAAGACC GAGTCCGACG CAGCGCTGCA CCCACTGTTG
CAAGAGATCT ACAGAGACAT GTACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_011243818.1
CDS416..1822
Misc Feature(1)716..967(+)
Misc Feature(2)719..883(+)
Misc Feature(3)743..946(+)
Misc Feature(4)857..871(+)
Misc Feature(5)1016..1816(+)
Misc Feature(6)1238..1735(+)
Misc Feature(7)1268..1345(+)
Misc Feature(8)1505..1741(+)
Translation

Target ORF information:

RefSeq Version XM_011245516
Organism Mus musculus (house mouse)
Definition PREDICTED: Mus musculus peroxisome proliferator activated receptor alpha (Ppara), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_011245516

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGTGGACA CAGAGAGCCC CATCTGTCCT CTCTCCCCAC TGGAGGCAGA TGACCTGGAA 
AGTCCCTTAT CTGAAGAATT CTTACAAGAA ATGGGAAACA TTCAAGAGAT TTCTCAGTCC
ATCGGTGAGG AGAGCTCTGG AAGCTTTGGT TTTGCAGACT ACCAGTACTT AGGAAGCTGT
CCGGGCTCCG AGGGCTCTGT CATCACAGAC ACCCTCTCTC CAGCTTCCAG CCCTTCCTCA
GTCAGCTGCC CCGTGATCCC CGCCAGCACG GACGAGTCCC CCGGCAGTGC CCTGAACATC
GAGTGTCGAA TATGTGGGGA CAAGGCCTCA GGGTACCACT ACGGAGTTCA CGCATGTGAA
GGCTGTAAGG GCTTCTTTCG GCGAACTATT CGGCTGAAGC TGGTGTACGA CAAGTGTGAT
CGGAGCTGCA AGATTCAGAA GAAGAACCGG AACAAATGCC AGTACTGCCG TTTTCACAAG
TGCCTGTCTG TCGGGATGTC ACACAATGCA ATTCGCTTTG GAAGAATGCC AAGATCTGAA
AAAGCAAAAC TGAAAGCAGA AATTCTTACC TGTGAACACG ACCTGAAAGA TTCGGAAACT
GCAGACCTCA AATCTCTGGG CAAGAGAATC CACGAAGCCT ACCTGAAGAA CTTCAACATG
AACAAGGTCA AGGCCCGGGT CATACTCGCG GGAAAGACCA GCAACAACCC GCCTTTTGTC
ATACATGACA TGGAGACCTT GTGTATGGCC GAGAAGACGC TTGTGGCCAA GATGGTGGCC
AACGGCGTCG AAGACAAAGA GGCAGAGGTC CGATTCTTCC ACTGCTGCCA GTGCATGTCC
GTGGAGACCG TCACGGAGCT CACAGAATTT GCCAAGGCTA TCCCAGGCTT TGCAAACTTG
GACTTGAACG ACCAAGTCAC CTTGCTAAAG TACGGTGTGT ATGAAGCCAT CTTCACGATG
CTGTCCTCCT TGATGAACAA AGACGGGATG CTGATCGCGT ACGGCAATGG CTTTATCACA
CGCGAGTTCC TTAAGAACCT GAGGAAGCCG TTCTGTGACA TCATGGAACC CAAGTTTGAC
TTCGCTATGA AGTTCAATGC CTTAGAACTG GATGACAGTG ACATTTCCCT GTTTGTGGCT
GCTATAATTT GCTGTGGAGA TCGGCCTGGC CTTCTAAACA TAGGCTACAT TGAGAAGTTG
CAGGAGGGGA TTGTGCACGT GCTTAAGCTC CACCTGCAGA GCAACCATCC AGATGACACC
TTCCTCTTCC CAAAGCTCCT TCAAAAAATG GTGGACCTTC GGCAGCTGGT CACGGAGCAT
GCGCAGCTCG TACAGGTCAT CAAGAAGACC GAGTCCGACG CAGCGCTGCA CCCACTGTTG
CAAGAGATCT ACAGAGACAT GTACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu22504
Clone ID Related Accession (Same CDS sequence) NM_001113418 , NM_011144 , XM_006520619 , XM_006520620 , XM_006520621 , XM_006520622 , XM_006520623 , XM_011245516 , XM_011245517 , XM_011245518 , XM_011245519
Accession Version XM_006520619.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1407bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 09-FEB-2015
Organism Mus musculus (house mouse)
Product peroxisome proliferator-activated receptor alpha isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_039621.8) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGTGGACA CAGAGAGCCC CATCTGTCCT CTCTCCCCAC TGGAGGCAGA TGACCTGGAA 
AGTCCCTTAT CTGAAGAATT CTTACAAGAA ATGGGAAACA TTCAAGAGAT TTCTCAGTCC
ATCGGTGAGG AGAGCTCTGG AAGCTTTGGT TTTGCAGACT ACCAGTACTT AGGAAGCTGT
CCGGGCTCCG AGGGCTCTGT CATCACAGAC ACCCTCTCTC CAGCTTCCAG CCCTTCCTCA
GTCAGCTGCC CCGTGATCCC CGCCAGCACG GACGAGTCCC CCGGCAGTGC CCTGAACATC
GAGTGTCGAA TATGTGGGGA CAAGGCCTCA GGGTACCACT ACGGAGTTCA CGCATGTGAA
GGCTGTAAGG GCTTCTTTCG GCGAACTATT CGGCTGAAGC TGGTGTACGA CAAGTGTGAT
CGGAGCTGCA AGATTCAGAA GAAGAACCGG AACAAATGCC AGTACTGCCG TTTTCACAAG
TGCCTGTCTG TCGGGATGTC ACACAATGCA ATTCGCTTTG GAAGAATGCC AAGATCTGAA
AAAGCAAAAC TGAAAGCAGA AATTCTTACC TGTGAACACG ACCTGAAAGA TTCGGAAACT
GCAGACCTCA AATCTCTGGG CAAGAGAATC CACGAAGCCT ACCTGAAGAA CTTCAACATG
AACAAGGTCA AGGCCCGGGT CATACTCGCG GGAAAGACCA GCAACAACCC GCCTTTTGTC
ATACATGACA TGGAGACCTT GTGTATGGCC GAGAAGACGC TTGTGGCCAA GATGGTGGCC
AACGGCGTCG AAGACAAAGA GGCAGAGGTC CGATTCTTCC ACTGCTGCCA GTGCATGTCC
GTGGAGACCG TCACGGAGCT CACAGAATTT GCCAAGGCTA TCCCAGGCTT TGCAAACTTG
GACTTGAACG ACCAAGTCAC CTTGCTAAAG TACGGTGTGT ATGAAGCCAT CTTCACGATG
CTGTCCTCCT TGATGAACAA AGACGGGATG CTGATCGCGT ACGGCAATGG CTTTATCACA
CGCGAGTTCC TTAAGAACCT GAGGAAGCCG TTCTGTGACA TCATGGAACC CAAGTTTGAC
TTCGCTATGA AGTTCAATGC CTTAGAACTG GATGACAGTG ACATTTCCCT GTTTGTGGCT
GCTATAATTT GCTGTGGAGA TCGGCCTGGC CTTCTAAACA TAGGCTACAT TGAGAAGTTG
CAGGAGGGGA TTGTGCACGT GCTTAAGCTC CACCTGCAGA GCAACCATCC AGATGACACC
TTCCTCTTCC CAAAGCTCCT TCAAAAAATG GTGGACCTTC GGCAGCTGGT CACGGAGCAT
GCGCAGCTCG TACAGGTCAT CAAGAAGACC GAGTCCGACG CAGCGCTGCA CCCACTGTTG
CAAGAGATCT ACAGAGACAT GTACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006520682.1
CDS213..1619
Misc Feature(1)513..764(+)
Misc Feature(2)516..680(+)
Misc Feature(3)540..743(+)
Misc Feature(4)654..668(+)
Misc Feature(5)813..1613(+)
Misc Feature(6)1035..1532(+)
Misc Feature(7)1065..1142(+)
Misc Feature(8)1302..1538(+)
Translation

Target ORF information:

RefSeq Version XM_006520619
Organism Mus musculus (house mouse)
Definition PREDICTED: Mus musculus peroxisome proliferator activated receptor alpha (Ppara), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_006520619

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGTGGACA CAGAGAGCCC CATCTGTCCT CTCTCCCCAC TGGAGGCAGA TGACCTGGAA 
AGTCCCTTAT CTGAAGAATT CTTACAAGAA ATGGGAAACA TTCAAGAGAT TTCTCAGTCC
ATCGGTGAGG AGAGCTCTGG AAGCTTTGGT TTTGCAGACT ACCAGTACTT AGGAAGCTGT
CCGGGCTCCG AGGGCTCTGT CATCACAGAC ACCCTCTCTC CAGCTTCCAG CCCTTCCTCA
GTCAGCTGCC CCGTGATCCC CGCCAGCACG GACGAGTCCC CCGGCAGTGC CCTGAACATC
GAGTGTCGAA TATGTGGGGA CAAGGCCTCA GGGTACCACT ACGGAGTTCA CGCATGTGAA
GGCTGTAAGG GCTTCTTTCG GCGAACTATT CGGCTGAAGC TGGTGTACGA CAAGTGTGAT
CGGAGCTGCA AGATTCAGAA GAAGAACCGG AACAAATGCC AGTACTGCCG TTTTCACAAG
TGCCTGTCTG TCGGGATGTC ACACAATGCA ATTCGCTTTG GAAGAATGCC AAGATCTGAA
AAAGCAAAAC TGAAAGCAGA AATTCTTACC TGTGAACACG ACCTGAAAGA TTCGGAAACT
GCAGACCTCA AATCTCTGGG CAAGAGAATC CACGAAGCCT ACCTGAAGAA CTTCAACATG
AACAAGGTCA AGGCCCGGGT CATACTCGCG GGAAAGACCA GCAACAACCC GCCTTTTGTC
ATACATGACA TGGAGACCTT GTGTATGGCC GAGAAGACGC TTGTGGCCAA GATGGTGGCC
AACGGCGTCG AAGACAAAGA GGCAGAGGTC CGATTCTTCC ACTGCTGCCA GTGCATGTCC
GTGGAGACCG TCACGGAGCT CACAGAATTT GCCAAGGCTA TCCCAGGCTT TGCAAACTTG
GACTTGAACG ACCAAGTCAC CTTGCTAAAG TACGGTGTGT ATGAAGCCAT CTTCACGATG
CTGTCCTCCT TGATGAACAA AGACGGGATG CTGATCGCGT ACGGCAATGG CTTTATCACA
CGCGAGTTCC TTAAGAACCT GAGGAAGCCG TTCTGTGACA TCATGGAACC CAAGTTTGAC
TTCGCTATGA AGTTCAATGC CTTAGAACTG GATGACAGTG ACATTTCCCT GTTTGTGGCT
GCTATAATTT GCTGTGGAGA TCGGCCTGGC CTTCTAAACA TAGGCTACAT TGAGAAGTTG
CAGGAGGGGA TTGTGCACGT GCTTAAGCTC CACCTGCAGA GCAACCATCC AGATGACACC
TTCCTCTTCC CAAAGCTCCT TCAAAAAATG GTGGACCTTC GGCAGCTGGT CACGGAGCAT
GCGCAGCTCG TACAGGTCAT CAAGAAGACC GAGTCCGACG CAGCGCTGCA CCCACTGTTG
CAAGAGATCT ACAGAGACAT GTACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu22504
Clone ID Related Accession (Same CDS sequence) NM_001113418 , NM_011144 , XM_006520619 , XM_006520620 , XM_006520621 , XM_006520622 , XM_006520623 , XM_011245516 , XM_011245517 , XM_011245518 , XM_011245519
Accession Version XM_006520620.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1407bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 09-FEB-2015
Organism Mus musculus (house mouse)
Product peroxisome proliferator-activated receptor alpha isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_039621.8) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced gi:568991728. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGTGGACA CAGAGAGCCC CATCTGTCCT CTCTCCCCAC TGGAGGCAGA TGACCTGGAA 
AGTCCCTTAT CTGAAGAATT CTTACAAGAA ATGGGAAACA TTCAAGAGAT TTCTCAGTCC
ATCGGTGAGG AGAGCTCTGG AAGCTTTGGT TTTGCAGACT ACCAGTACTT AGGAAGCTGT
CCGGGCTCCG AGGGCTCTGT CATCACAGAC ACCCTCTCTC CAGCTTCCAG CCCTTCCTCA
GTCAGCTGCC CCGTGATCCC CGCCAGCACG GACGAGTCCC CCGGCAGTGC CCTGAACATC
GAGTGTCGAA TATGTGGGGA CAAGGCCTCA GGGTACCACT ACGGAGTTCA CGCATGTGAA
GGCTGTAAGG GCTTCTTTCG GCGAACTATT CGGCTGAAGC TGGTGTACGA CAAGTGTGAT
CGGAGCTGCA AGATTCAGAA GAAGAACCGG AACAAATGCC AGTACTGCCG TTTTCACAAG
TGCCTGTCTG TCGGGATGTC ACACAATGCA ATTCGCTTTG GAAGAATGCC AAGATCTGAA
AAAGCAAAAC TGAAAGCAGA AATTCTTACC TGTGAACACG ACCTGAAAGA TTCGGAAACT
GCAGACCTCA AATCTCTGGG CAAGAGAATC CACGAAGCCT ACCTGAAGAA CTTCAACATG
AACAAGGTCA AGGCCCGGGT CATACTCGCG GGAAAGACCA GCAACAACCC GCCTTTTGTC
ATACATGACA TGGAGACCTT GTGTATGGCC GAGAAGACGC TTGTGGCCAA GATGGTGGCC
AACGGCGTCG AAGACAAAGA GGCAGAGGTC CGATTCTTCC ACTGCTGCCA GTGCATGTCC
GTGGAGACCG TCACGGAGCT CACAGAATTT GCCAAGGCTA TCCCAGGCTT TGCAAACTTG
GACTTGAACG ACCAAGTCAC CTTGCTAAAG TACGGTGTGT ATGAAGCCAT CTTCACGATG
CTGTCCTCCT TGATGAACAA AGACGGGATG CTGATCGCGT ACGGCAATGG CTTTATCACA
CGCGAGTTCC TTAAGAACCT GAGGAAGCCG TTCTGTGACA TCATGGAACC CAAGTTTGAC
TTCGCTATGA AGTTCAATGC CTTAGAACTG GATGACAGTG ACATTTCCCT GTTTGTGGCT
GCTATAATTT GCTGTGGAGA TCGGCCTGGC CTTCTAAACA TAGGCTACAT TGAGAAGTTG
CAGGAGGGGA TTGTGCACGT GCTTAAGCTC CACCTGCAGA GCAACCATCC AGATGACACC
TTCCTCTTCC CAAAGCTCCT TCAAAAAATG GTGGACCTTC GGCAGCTGGT CACGGAGCAT
GCGCAGCTCG TACAGGTCAT CAAGAAGACC GAGTCCGACG CAGCGCTGCA CCCACTGTTG
CAAGAGATCT ACAGAGACAT GTACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006520683.1
CDS195..1601
Misc Feature(1)495..746(+)
Misc Feature(2)498..662(+)
Misc Feature(3)522..725(+)
Misc Feature(4)636..650(+)
Misc Feature(5)795..1595(+)
Misc Feature(6)1017..1514(+)
Misc Feature(7)1047..1124(+)
Misc Feature(8)1284..1520(+)
Translation

Target ORF information:

RefSeq Version XM_006520620
Organism Mus musculus (house mouse)
Definition PREDICTED: Mus musculus peroxisome proliferator activated receptor alpha (Ppara), transcript variant X3, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_006520620

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGTGGACA CAGAGAGCCC CATCTGTCCT CTCTCCCCAC TGGAGGCAGA TGACCTGGAA 
AGTCCCTTAT CTGAAGAATT CTTACAAGAA ATGGGAAACA TTCAAGAGAT TTCTCAGTCC
ATCGGTGAGG AGAGCTCTGG AAGCTTTGGT TTTGCAGACT ACCAGTACTT AGGAAGCTGT
CCGGGCTCCG AGGGCTCTGT CATCACAGAC ACCCTCTCTC CAGCTTCCAG CCCTTCCTCA
GTCAGCTGCC CCGTGATCCC CGCCAGCACG GACGAGTCCC CCGGCAGTGC CCTGAACATC
GAGTGTCGAA TATGTGGGGA CAAGGCCTCA GGGTACCACT ACGGAGTTCA CGCATGTGAA
GGCTGTAAGG GCTTCTTTCG GCGAACTATT CGGCTGAAGC TGGTGTACGA CAAGTGTGAT
CGGAGCTGCA AGATTCAGAA GAAGAACCGG AACAAATGCC AGTACTGCCG TTTTCACAAG
TGCCTGTCTG TCGGGATGTC ACACAATGCA ATTCGCTTTG GAAGAATGCC AAGATCTGAA
AAAGCAAAAC TGAAAGCAGA AATTCTTACC TGTGAACACG ACCTGAAAGA TTCGGAAACT
GCAGACCTCA AATCTCTGGG CAAGAGAATC CACGAAGCCT ACCTGAAGAA CTTCAACATG
AACAAGGTCA AGGCCCGGGT CATACTCGCG GGAAAGACCA GCAACAACCC GCCTTTTGTC
ATACATGACA TGGAGACCTT GTGTATGGCC GAGAAGACGC TTGTGGCCAA GATGGTGGCC
AACGGCGTCG AAGACAAAGA GGCAGAGGTC CGATTCTTCC ACTGCTGCCA GTGCATGTCC
GTGGAGACCG TCACGGAGCT CACAGAATTT GCCAAGGCTA TCCCAGGCTT TGCAAACTTG
GACTTGAACG ACCAAGTCAC CTTGCTAAAG TACGGTGTGT ATGAAGCCAT CTTCACGATG
CTGTCCTCCT TGATGAACAA AGACGGGATG CTGATCGCGT ACGGCAATGG CTTTATCACA
CGCGAGTTCC TTAAGAACCT GAGGAAGCCG TTCTGTGACA TCATGGAACC CAAGTTTGAC
TTCGCTATGA AGTTCAATGC CTTAGAACTG GATGACAGTG ACATTTCCCT GTTTGTGGCT
GCTATAATTT GCTGTGGAGA TCGGCCTGGC CTTCTAAACA TAGGCTACAT TGAGAAGTTG
CAGGAGGGGA TTGTGCACGT GCTTAAGCTC CACCTGCAGA GCAACCATCC AGATGACACC
TTCCTCTTCC CAAAGCTCCT TCAAAAAATG GTGGACCTTC GGCAGCTGGT CACGGAGCAT
GCGCAGCTCG TACAGGTCAT CAAGAAGACC GAGTCCGACG CAGCGCTGCA CCCACTGTTG
CAAGAGATCT ACAGAGACAT GTACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu22504
Clone ID Related Accession (Same CDS sequence) NM_001113418 , NM_011144 , XM_006520619 , XM_006520620 , XM_006520621 , XM_006520622 , XM_006520623 , XM_011245516 , XM_011245517 , XM_011245518 , XM_011245519
Accession Version XM_011245517.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1407bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 09-FEB-2015
Organism Mus musculus (house mouse)
Product peroxisome proliferator-activated receptor alpha isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_039621.8) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGTGGACA CAGAGAGCCC CATCTGTCCT CTCTCCCCAC TGGAGGCAGA TGACCTGGAA 
AGTCCCTTAT CTGAAGAATT CTTACAAGAA ATGGGAAACA TTCAAGAGAT TTCTCAGTCC
ATCGGTGAGG AGAGCTCTGG AAGCTTTGGT TTTGCAGACT ACCAGTACTT AGGAAGCTGT
CCGGGCTCCG AGGGCTCTGT CATCACAGAC ACCCTCTCTC CAGCTTCCAG CCCTTCCTCA
GTCAGCTGCC CCGTGATCCC CGCCAGCACG GACGAGTCCC CCGGCAGTGC CCTGAACATC
GAGTGTCGAA TATGTGGGGA CAAGGCCTCA GGGTACCACT ACGGAGTTCA CGCATGTGAA
GGCTGTAAGG GCTTCTTTCG GCGAACTATT CGGCTGAAGC TGGTGTACGA CAAGTGTGAT
CGGAGCTGCA AGATTCAGAA GAAGAACCGG AACAAATGCC AGTACTGCCG TTTTCACAAG
TGCCTGTCTG TCGGGATGTC ACACAATGCA ATTCGCTTTG GAAGAATGCC AAGATCTGAA
AAAGCAAAAC TGAAAGCAGA AATTCTTACC TGTGAACACG ACCTGAAAGA TTCGGAAACT
GCAGACCTCA AATCTCTGGG CAAGAGAATC CACGAAGCCT ACCTGAAGAA CTTCAACATG
AACAAGGTCA AGGCCCGGGT CATACTCGCG GGAAAGACCA GCAACAACCC GCCTTTTGTC
ATACATGACA TGGAGACCTT GTGTATGGCC GAGAAGACGC TTGTGGCCAA GATGGTGGCC
AACGGCGTCG AAGACAAAGA GGCAGAGGTC CGATTCTTCC ACTGCTGCCA GTGCATGTCC
GTGGAGACCG TCACGGAGCT CACAGAATTT GCCAAGGCTA TCCCAGGCTT TGCAAACTTG
GACTTGAACG ACCAAGTCAC CTTGCTAAAG TACGGTGTGT ATGAAGCCAT CTTCACGATG
CTGTCCTCCT TGATGAACAA AGACGGGATG CTGATCGCGT ACGGCAATGG CTTTATCACA
CGCGAGTTCC TTAAGAACCT GAGGAAGCCG TTCTGTGACA TCATGGAACC CAAGTTTGAC
TTCGCTATGA AGTTCAATGC CTTAGAACTG GATGACAGTG ACATTTCCCT GTTTGTGGCT
GCTATAATTT GCTGTGGAGA TCGGCCTGGC CTTCTAAACA TAGGCTACAT TGAGAAGTTG
CAGGAGGGGA TTGTGCACGT GCTTAAGCTC CACCTGCAGA GCAACCATCC AGATGACACC
TTCCTCTTCC CAAAGCTCCT TCAAAAAATG GTGGACCTTC GGCAGCTGGT CACGGAGCAT
GCGCAGCTCG TACAGGTCAT CAAGAAGACC GAGTCCGACG CAGCGCTGCA CCCACTGTTG
CAAGAGATCT ACAGAGACAT GTACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_011243819.1
CDS371..1777
Misc Feature(1)671..922(+)
Misc Feature(2)674..838(+)
Misc Feature(3)698..901(+)
Misc Feature(4)812..826(+)
Misc Feature(5)971..1771(+)
Misc Feature(6)1193..1690(+)
Misc Feature(7)1223..1300(+)
Misc Feature(8)1460..1696(+)
Translation

Target ORF information:

RefSeq Version XM_011245517
Organism Mus musculus (house mouse)
Definition PREDICTED: Mus musculus peroxisome proliferator activated receptor alpha (Ppara), transcript variant X4, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_011245517

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGTGGACA CAGAGAGCCC CATCTGTCCT CTCTCCCCAC TGGAGGCAGA TGACCTGGAA 
AGTCCCTTAT CTGAAGAATT CTTACAAGAA ATGGGAAACA TTCAAGAGAT TTCTCAGTCC
ATCGGTGAGG AGAGCTCTGG AAGCTTTGGT TTTGCAGACT ACCAGTACTT AGGAAGCTGT
CCGGGCTCCG AGGGCTCTGT CATCACAGAC ACCCTCTCTC CAGCTTCCAG CCCTTCCTCA
GTCAGCTGCC CCGTGATCCC CGCCAGCACG GACGAGTCCC CCGGCAGTGC CCTGAACATC
GAGTGTCGAA TATGTGGGGA CAAGGCCTCA GGGTACCACT ACGGAGTTCA CGCATGTGAA
GGCTGTAAGG GCTTCTTTCG GCGAACTATT CGGCTGAAGC TGGTGTACGA CAAGTGTGAT
CGGAGCTGCA AGATTCAGAA GAAGAACCGG AACAAATGCC AGTACTGCCG TTTTCACAAG
TGCCTGTCTG TCGGGATGTC ACACAATGCA ATTCGCTTTG GAAGAATGCC AAGATCTGAA
AAAGCAAAAC TGAAAGCAGA AATTCTTACC TGTGAACACG ACCTGAAAGA TTCGGAAACT
GCAGACCTCA AATCTCTGGG CAAGAGAATC CACGAAGCCT ACCTGAAGAA CTTCAACATG
AACAAGGTCA AGGCCCGGGT CATACTCGCG GGAAAGACCA GCAACAACCC GCCTTTTGTC
ATACATGACA TGGAGACCTT GTGTATGGCC GAGAAGACGC TTGTGGCCAA GATGGTGGCC
AACGGCGTCG AAGACAAAGA GGCAGAGGTC CGATTCTTCC ACTGCTGCCA GTGCATGTCC
GTGGAGACCG TCACGGAGCT CACAGAATTT GCCAAGGCTA TCCCAGGCTT TGCAAACTTG
GACTTGAACG ACCAAGTCAC CTTGCTAAAG TACGGTGTGT ATGAAGCCAT CTTCACGATG
CTGTCCTCCT TGATGAACAA AGACGGGATG CTGATCGCGT ACGGCAATGG CTTTATCACA
CGCGAGTTCC TTAAGAACCT GAGGAAGCCG TTCTGTGACA TCATGGAACC CAAGTTTGAC
TTCGCTATGA AGTTCAATGC CTTAGAACTG GATGACAGTG ACATTTCCCT GTTTGTGGCT
GCTATAATTT GCTGTGGAGA TCGGCCTGGC CTTCTAAACA TAGGCTACAT TGAGAAGTTG
CAGGAGGGGA TTGTGCACGT GCTTAAGCTC CACCTGCAGA GCAACCATCC AGATGACACC
TTCCTCTTCC CAAAGCTCCT TCAAAAAATG GTGGACCTTC GGCAGCTGGT CACGGAGCAT
GCGCAGCTCG TACAGGTCAT CAAGAAGACC GAGTCCGACG CAGCGCTGCA CCCACTGTTG
CAAGAGATCT ACAGAGACAT GTACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu22504
Clone ID Related Accession (Same CDS sequence) NM_001113418 , NM_011144 , XM_006520619 , XM_006520620 , XM_006520621 , XM_006520622 , XM_006520623 , XM_011245516 , XM_011245517 , XM_011245518 , XM_011245519
Accession Version XM_011245518.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1407bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 09-FEB-2015
Organism Mus musculus (house mouse)
Product peroxisome proliferator-activated receptor alpha isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_039621.8) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGTGGACA CAGAGAGCCC CATCTGTCCT CTCTCCCCAC TGGAGGCAGA TGACCTGGAA 
AGTCCCTTAT CTGAAGAATT CTTACAAGAA ATGGGAAACA TTCAAGAGAT TTCTCAGTCC
ATCGGTGAGG AGAGCTCTGG AAGCTTTGGT TTTGCAGACT ACCAGTACTT AGGAAGCTGT
CCGGGCTCCG AGGGCTCTGT CATCACAGAC ACCCTCTCTC CAGCTTCCAG CCCTTCCTCA
GTCAGCTGCC CCGTGATCCC CGCCAGCACG GACGAGTCCC CCGGCAGTGC CCTGAACATC
GAGTGTCGAA TATGTGGGGA CAAGGCCTCA GGGTACCACT ACGGAGTTCA CGCATGTGAA
GGCTGTAAGG GCTTCTTTCG GCGAACTATT CGGCTGAAGC TGGTGTACGA CAAGTGTGAT
CGGAGCTGCA AGATTCAGAA GAAGAACCGG AACAAATGCC AGTACTGCCG TTTTCACAAG
TGCCTGTCTG TCGGGATGTC ACACAATGCA ATTCGCTTTG GAAGAATGCC AAGATCTGAA
AAAGCAAAAC TGAAAGCAGA AATTCTTACC TGTGAACACG ACCTGAAAGA TTCGGAAACT
GCAGACCTCA AATCTCTGGG CAAGAGAATC CACGAAGCCT ACCTGAAGAA CTTCAACATG
AACAAGGTCA AGGCCCGGGT CATACTCGCG GGAAAGACCA GCAACAACCC GCCTTTTGTC
ATACATGACA TGGAGACCTT GTGTATGGCC GAGAAGACGC TTGTGGCCAA GATGGTGGCC
AACGGCGTCG AAGACAAAGA GGCAGAGGTC CGATTCTTCC ACTGCTGCCA GTGCATGTCC
GTGGAGACCG TCACGGAGCT CACAGAATTT GCCAAGGCTA TCCCAGGCTT TGCAAACTTG
GACTTGAACG ACCAAGTCAC CTTGCTAAAG TACGGTGTGT ATGAAGCCAT CTTCACGATG
CTGTCCTCCT TGATGAACAA AGACGGGATG CTGATCGCGT ACGGCAATGG CTTTATCACA
CGCGAGTTCC TTAAGAACCT GAGGAAGCCG TTCTGTGACA TCATGGAACC CAAGTTTGAC
TTCGCTATGA AGTTCAATGC CTTAGAACTG GATGACAGTG ACATTTCCCT GTTTGTGGCT
GCTATAATTT GCTGTGGAGA TCGGCCTGGC CTTCTAAACA TAGGCTACAT TGAGAAGTTG
CAGGAGGGGA TTGTGCACGT GCTTAAGCTC CACCTGCAGA GCAACCATCC AGATGACACC
TTCCTCTTCC CAAAGCTCCT TCAAAAAATG GTGGACCTTC GGCAGCTGGT CACGGAGCAT
GCGCAGCTCG TACAGGTCAT CAAGAAGACC GAGTCCGACG CAGCGCTGCA CCCACTGTTG
CAAGAGATCT ACAGAGACAT GTACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_011243820.1
CDS319..1725
Misc Feature(1)619..870(+)
Misc Feature(2)622..786(+)
Misc Feature(3)646..849(+)
Misc Feature(4)760..774(+)
Misc Feature(5)919..1719(+)
Misc Feature(6)1141..1638(+)
Misc Feature(7)1171..1248(+)
Misc Feature(8)1408..1644(+)
Translation

Target ORF information:

RefSeq Version XM_011245518
Organism Mus musculus (house mouse)
Definition PREDICTED: Mus musculus peroxisome proliferator activated receptor alpha (Ppara), transcript variant X5, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_011245518

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGTGGACA CAGAGAGCCC CATCTGTCCT CTCTCCCCAC TGGAGGCAGA TGACCTGGAA 
AGTCCCTTAT CTGAAGAATT CTTACAAGAA ATGGGAAACA TTCAAGAGAT TTCTCAGTCC
ATCGGTGAGG AGAGCTCTGG AAGCTTTGGT TTTGCAGACT ACCAGTACTT AGGAAGCTGT
CCGGGCTCCG AGGGCTCTGT CATCACAGAC ACCCTCTCTC CAGCTTCCAG CCCTTCCTCA
GTCAGCTGCC CCGTGATCCC CGCCAGCACG GACGAGTCCC CCGGCAGTGC CCTGAACATC
GAGTGTCGAA TATGTGGGGA CAAGGCCTCA GGGTACCACT ACGGAGTTCA CGCATGTGAA
GGCTGTAAGG GCTTCTTTCG GCGAACTATT CGGCTGAAGC TGGTGTACGA CAAGTGTGAT
CGGAGCTGCA AGATTCAGAA GAAGAACCGG AACAAATGCC AGTACTGCCG TTTTCACAAG
TGCCTGTCTG TCGGGATGTC ACACAATGCA ATTCGCTTTG GAAGAATGCC AAGATCTGAA
AAAGCAAAAC TGAAAGCAGA AATTCTTACC TGTGAACACG ACCTGAAAGA TTCGGAAACT
GCAGACCTCA AATCTCTGGG CAAGAGAATC CACGAAGCCT ACCTGAAGAA CTTCAACATG
AACAAGGTCA AGGCCCGGGT CATACTCGCG GGAAAGACCA GCAACAACCC GCCTTTTGTC
ATACATGACA TGGAGACCTT GTGTATGGCC GAGAAGACGC TTGTGGCCAA GATGGTGGCC
AACGGCGTCG AAGACAAAGA GGCAGAGGTC CGATTCTTCC ACTGCTGCCA GTGCATGTCC
GTGGAGACCG TCACGGAGCT CACAGAATTT GCCAAGGCTA TCCCAGGCTT TGCAAACTTG
GACTTGAACG ACCAAGTCAC CTTGCTAAAG TACGGTGTGT ATGAAGCCAT CTTCACGATG
CTGTCCTCCT TGATGAACAA AGACGGGATG CTGATCGCGT ACGGCAATGG CTTTATCACA
CGCGAGTTCC TTAAGAACCT GAGGAAGCCG TTCTGTGACA TCATGGAACC CAAGTTTGAC
TTCGCTATGA AGTTCAATGC CTTAGAACTG GATGACAGTG ACATTTCCCT GTTTGTGGCT
GCTATAATTT GCTGTGGAGA TCGGCCTGGC CTTCTAAACA TAGGCTACAT TGAGAAGTTG
CAGGAGGGGA TTGTGCACGT GCTTAAGCTC CACCTGCAGA GCAACCATCC AGATGACACC
TTCCTCTTCC CAAAGCTCCT TCAAAAAATG GTGGACCTTC GGCAGCTGGT CACGGAGCAT
GCGCAGCTCG TACAGGTCAT CAAGAAGACC GAGTCCGACG CAGCGCTGCA CCCACTGTTG
CAAGAGATCT ACAGAGACAT GTACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu22504
Clone ID Related Accession (Same CDS sequence) NM_001113418 , NM_011144 , XM_006520619 , XM_006520620 , XM_006520621 , XM_006520622 , XM_006520623 , XM_011245516 , XM_011245517 , XM_011245518 , XM_011245519
Accession Version XM_011245519.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1407bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 09-FEB-2015
Organism Mus musculus (house mouse)
Product peroxisome proliferator-activated receptor alpha isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_039621.8) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGTGGACA CAGAGAGCCC CATCTGTCCT CTCTCCCCAC TGGAGGCAGA TGACCTGGAA 
AGTCCCTTAT CTGAAGAATT CTTACAAGAA ATGGGAAACA TTCAAGAGAT TTCTCAGTCC
ATCGGTGAGG AGAGCTCTGG AAGCTTTGGT TTTGCAGACT ACCAGTACTT AGGAAGCTGT
CCGGGCTCCG AGGGCTCTGT CATCACAGAC ACCCTCTCTC CAGCTTCCAG CCCTTCCTCA
GTCAGCTGCC CCGTGATCCC CGCCAGCACG GACGAGTCCC CCGGCAGTGC CCTGAACATC
GAGTGTCGAA TATGTGGGGA CAAGGCCTCA GGGTACCACT ACGGAGTTCA CGCATGTGAA
GGCTGTAAGG GCTTCTTTCG GCGAACTATT CGGCTGAAGC TGGTGTACGA CAAGTGTGAT
CGGAGCTGCA AGATTCAGAA GAAGAACCGG AACAAATGCC AGTACTGCCG TTTTCACAAG
TGCCTGTCTG TCGGGATGTC ACACAATGCA ATTCGCTTTG GAAGAATGCC AAGATCTGAA
AAAGCAAAAC TGAAAGCAGA AATTCTTACC TGTGAACACG ACCTGAAAGA TTCGGAAACT
GCAGACCTCA AATCTCTGGG CAAGAGAATC CACGAAGCCT ACCTGAAGAA CTTCAACATG
AACAAGGTCA AGGCCCGGGT CATACTCGCG GGAAAGACCA GCAACAACCC GCCTTTTGTC
ATACATGACA TGGAGACCTT GTGTATGGCC GAGAAGACGC TTGTGGCCAA GATGGTGGCC
AACGGCGTCG AAGACAAAGA GGCAGAGGTC CGATTCTTCC ACTGCTGCCA GTGCATGTCC
GTGGAGACCG TCACGGAGCT CACAGAATTT GCCAAGGCTA TCCCAGGCTT TGCAAACTTG
GACTTGAACG ACCAAGTCAC CTTGCTAAAG TACGGTGTGT ATGAAGCCAT CTTCACGATG
CTGTCCTCCT TGATGAACAA AGACGGGATG CTGATCGCGT ACGGCAATGG CTTTATCACA
CGCGAGTTCC TTAAGAACCT GAGGAAGCCG TTCTGTGACA TCATGGAACC CAAGTTTGAC
TTCGCTATGA AGTTCAATGC CTTAGAACTG GATGACAGTG ACATTTCCCT GTTTGTGGCT
GCTATAATTT GCTGTGGAGA TCGGCCTGGC CTTCTAAACA TAGGCTACAT TGAGAAGTTG
CAGGAGGGGA TTGTGCACGT GCTTAAGCTC CACCTGCAGA GCAACCATCC AGATGACACC
TTCCTCTTCC CAAAGCTCCT TCAAAAAATG GTGGACCTTC GGCAGCTGGT CACGGAGCAT
GCGCAGCTCG TACAGGTCAT CAAGAAGACC GAGTCCGACG CAGCGCTGCA CCCACTGTTG
CAAGAGATCT ACAGAGACAT GTACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_011243821.1
CDS318..1724
Misc Feature(1)618..869(+)
Misc Feature(2)621..785(+)
Misc Feature(3)645..848(+)
Misc Feature(4)759..773(+)
Misc Feature(5)918..1718(+)
Misc Feature(6)1140..1637(+)
Misc Feature(7)1170..1247(+)
Misc Feature(8)1407..1643(+)
Translation

Target ORF information:

RefSeq Version XM_011245519
Organism Mus musculus (house mouse)
Definition PREDICTED: Mus musculus peroxisome proliferator activated receptor alpha (Ppara), transcript variant X6, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_011245519

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGTGGACA CAGAGAGCCC CATCTGTCCT CTCTCCCCAC TGGAGGCAGA TGACCTGGAA 
AGTCCCTTAT CTGAAGAATT CTTACAAGAA ATGGGAAACA TTCAAGAGAT TTCTCAGTCC
ATCGGTGAGG AGAGCTCTGG AAGCTTTGGT TTTGCAGACT ACCAGTACTT AGGAAGCTGT
CCGGGCTCCG AGGGCTCTGT CATCACAGAC ACCCTCTCTC CAGCTTCCAG CCCTTCCTCA
GTCAGCTGCC CCGTGATCCC CGCCAGCACG GACGAGTCCC CCGGCAGTGC CCTGAACATC
GAGTGTCGAA TATGTGGGGA CAAGGCCTCA GGGTACCACT ACGGAGTTCA CGCATGTGAA
GGCTGTAAGG GCTTCTTTCG GCGAACTATT CGGCTGAAGC TGGTGTACGA CAAGTGTGAT
CGGAGCTGCA AGATTCAGAA GAAGAACCGG AACAAATGCC AGTACTGCCG TTTTCACAAG
TGCCTGTCTG TCGGGATGTC ACACAATGCA ATTCGCTTTG GAAGAATGCC AAGATCTGAA
AAAGCAAAAC TGAAAGCAGA AATTCTTACC TGTGAACACG ACCTGAAAGA TTCGGAAACT
GCAGACCTCA AATCTCTGGG CAAGAGAATC CACGAAGCCT ACCTGAAGAA CTTCAACATG
AACAAGGTCA AGGCCCGGGT CATACTCGCG GGAAAGACCA GCAACAACCC GCCTTTTGTC
ATACATGACA TGGAGACCTT GTGTATGGCC GAGAAGACGC TTGTGGCCAA GATGGTGGCC
AACGGCGTCG AAGACAAAGA GGCAGAGGTC CGATTCTTCC ACTGCTGCCA GTGCATGTCC
GTGGAGACCG TCACGGAGCT CACAGAATTT GCCAAGGCTA TCCCAGGCTT TGCAAACTTG
GACTTGAACG ACCAAGTCAC CTTGCTAAAG TACGGTGTGT ATGAAGCCAT CTTCACGATG
CTGTCCTCCT TGATGAACAA AGACGGGATG CTGATCGCGT ACGGCAATGG CTTTATCACA
CGCGAGTTCC TTAAGAACCT GAGGAAGCCG TTCTGTGACA TCATGGAACC CAAGTTTGAC
TTCGCTATGA AGTTCAATGC CTTAGAACTG GATGACAGTG ACATTTCCCT GTTTGTGGCT
GCTATAATTT GCTGTGGAGA TCGGCCTGGC CTTCTAAACA TAGGCTACAT TGAGAAGTTG
CAGGAGGGGA TTGTGCACGT GCTTAAGCTC CACCTGCAGA GCAACCATCC AGATGACACC
TTCCTCTTCC CAAAGCTCCT TCAAAAAATG GTGGACCTTC GGCAGCTGGT CACGGAGCAT
GCGCAGCTCG TACAGGTCAT CAAGAAGACC GAGTCCGACG CAGCGCTGCA CCCACTGTTG
CAAGAGATCT ACAGAGACAT GTACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu22504
Clone ID Related Accession (Same CDS sequence) NM_001113418 , NM_011144 , XM_006520619 , XM_006520620 , XM_006520621 , XM_006520622 , XM_006520623 , XM_011245516 , XM_011245517 , XM_011245518 , XM_011245519
Accession Version XM_006520621.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1407bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 09-FEB-2015
Organism Mus musculus (house mouse)
Product peroxisome proliferator-activated receptor alpha isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_039621.8) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced gi:568991730. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGTGGACA CAGAGAGCCC CATCTGTCCT CTCTCCCCAC TGGAGGCAGA TGACCTGGAA 
AGTCCCTTAT CTGAAGAATT CTTACAAGAA ATGGGAAACA TTCAAGAGAT TTCTCAGTCC
ATCGGTGAGG AGAGCTCTGG AAGCTTTGGT TTTGCAGACT ACCAGTACTT AGGAAGCTGT
CCGGGCTCCG AGGGCTCTGT CATCACAGAC ACCCTCTCTC CAGCTTCCAG CCCTTCCTCA
GTCAGCTGCC CCGTGATCCC CGCCAGCACG GACGAGTCCC CCGGCAGTGC CCTGAACATC
GAGTGTCGAA TATGTGGGGA CAAGGCCTCA GGGTACCACT ACGGAGTTCA CGCATGTGAA
GGCTGTAAGG GCTTCTTTCG GCGAACTATT CGGCTGAAGC TGGTGTACGA CAAGTGTGAT
CGGAGCTGCA AGATTCAGAA GAAGAACCGG AACAAATGCC AGTACTGCCG TTTTCACAAG
TGCCTGTCTG TCGGGATGTC ACACAATGCA ATTCGCTTTG GAAGAATGCC AAGATCTGAA
AAAGCAAAAC TGAAAGCAGA AATTCTTACC TGTGAACACG ACCTGAAAGA TTCGGAAACT
GCAGACCTCA AATCTCTGGG CAAGAGAATC CACGAAGCCT ACCTGAAGAA CTTCAACATG
AACAAGGTCA AGGCCCGGGT CATACTCGCG GGAAAGACCA GCAACAACCC GCCTTTTGTC
ATACATGACA TGGAGACCTT GTGTATGGCC GAGAAGACGC TTGTGGCCAA GATGGTGGCC
AACGGCGTCG AAGACAAAGA GGCAGAGGTC CGATTCTTCC ACTGCTGCCA GTGCATGTCC
GTGGAGACCG TCACGGAGCT CACAGAATTT GCCAAGGCTA TCCCAGGCTT TGCAAACTTG
GACTTGAACG ACCAAGTCAC CTTGCTAAAG TACGGTGTGT ATGAAGCCAT CTTCACGATG
CTGTCCTCCT TGATGAACAA AGACGGGATG CTGATCGCGT ACGGCAATGG CTTTATCACA
CGCGAGTTCC TTAAGAACCT GAGGAAGCCG TTCTGTGACA TCATGGAACC CAAGTTTGAC
TTCGCTATGA AGTTCAATGC CTTAGAACTG GATGACAGTG ACATTTCCCT GTTTGTGGCT
GCTATAATTT GCTGTGGAGA TCGGCCTGGC CTTCTAAACA TAGGCTACAT TGAGAAGTTG
CAGGAGGGGA TTGTGCACGT GCTTAAGCTC CACCTGCAGA GCAACCATCC AGATGACACC
TTCCTCTTCC CAAAGCTCCT TCAAAAAATG GTGGACCTTC GGCAGCTGGT CACGGAGCAT
GCGCAGCTCG TACAGGTCAT CAAGAAGACC GAGTCCGACG CAGCGCTGCA CCCACTGTTG
CAAGAGATCT ACAGAGACAT GTACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006520684.1
CDS285..1691
Misc Feature(1)585..836(+)
Misc Feature(2)588..752(+)
Misc Feature(3)612..815(+)
Misc Feature(4)726..740(+)
Misc Feature(5)885..1685(+)
Misc Feature(6)1107..1604(+)
Misc Feature(7)1137..1214(+)
Misc Feature(8)1374..1610(+)
Translation

Target ORF information:

RefSeq Version XM_006520621
Organism Mus musculus (house mouse)
Definition PREDICTED: Mus musculus peroxisome proliferator activated receptor alpha (Ppara), transcript variant X7, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_006520621

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGTGGACA CAGAGAGCCC CATCTGTCCT CTCTCCCCAC TGGAGGCAGA TGACCTGGAA 
AGTCCCTTAT CTGAAGAATT CTTACAAGAA ATGGGAAACA TTCAAGAGAT TTCTCAGTCC
ATCGGTGAGG AGAGCTCTGG AAGCTTTGGT TTTGCAGACT ACCAGTACTT AGGAAGCTGT
CCGGGCTCCG AGGGCTCTGT CATCACAGAC ACCCTCTCTC CAGCTTCCAG CCCTTCCTCA
GTCAGCTGCC CCGTGATCCC CGCCAGCACG GACGAGTCCC CCGGCAGTGC CCTGAACATC
GAGTGTCGAA TATGTGGGGA CAAGGCCTCA GGGTACCACT ACGGAGTTCA CGCATGTGAA
GGCTGTAAGG GCTTCTTTCG GCGAACTATT CGGCTGAAGC TGGTGTACGA CAAGTGTGAT
CGGAGCTGCA AGATTCAGAA GAAGAACCGG AACAAATGCC AGTACTGCCG TTTTCACAAG
TGCCTGTCTG TCGGGATGTC ACACAATGCA ATTCGCTTTG GAAGAATGCC AAGATCTGAA
AAAGCAAAAC TGAAAGCAGA AATTCTTACC TGTGAACACG ACCTGAAAGA TTCGGAAACT
GCAGACCTCA AATCTCTGGG CAAGAGAATC CACGAAGCCT ACCTGAAGAA CTTCAACATG
AACAAGGTCA AGGCCCGGGT CATACTCGCG GGAAAGACCA GCAACAACCC GCCTTTTGTC
ATACATGACA TGGAGACCTT GTGTATGGCC GAGAAGACGC TTGTGGCCAA GATGGTGGCC
AACGGCGTCG AAGACAAAGA GGCAGAGGTC CGATTCTTCC ACTGCTGCCA GTGCATGTCC
GTGGAGACCG TCACGGAGCT CACAGAATTT GCCAAGGCTA TCCCAGGCTT TGCAAACTTG
GACTTGAACG ACCAAGTCAC CTTGCTAAAG TACGGTGTGT ATGAAGCCAT CTTCACGATG
CTGTCCTCCT TGATGAACAA AGACGGGATG CTGATCGCGT ACGGCAATGG CTTTATCACA
CGCGAGTTCC TTAAGAACCT GAGGAAGCCG TTCTGTGACA TCATGGAACC CAAGTTTGAC
TTCGCTATGA AGTTCAATGC CTTAGAACTG GATGACAGTG ACATTTCCCT GTTTGTGGCT
GCTATAATTT GCTGTGGAGA TCGGCCTGGC CTTCTAAACA TAGGCTACAT TGAGAAGTTG
CAGGAGGGGA TTGTGCACGT GCTTAAGCTC CACCTGCAGA GCAACCATCC AGATGACACC
TTCCTCTTCC CAAAGCTCCT TCAAAAAATG GTGGACCTTC GGCAGCTGGT CACGGAGCAT
GCGCAGCTCG TACAGGTCAT CAAGAAGACC GAGTCCGACG CAGCGCTGCA CCCACTGTTG
CAAGAGATCT ACAGAGACAT GTACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu22504
Clone ID Related Accession (Same CDS sequence) NM_001113418 , NM_011144 , XM_006520619 , XM_006520620 , XM_006520621 , XM_006520622 , XM_006520623 , XM_011245516 , XM_011245517 , XM_011245518 , XM_011245519
Accession Version XM_006520622.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1407bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 09-FEB-2015
Organism Mus musculus (house mouse)
Product peroxisome proliferator-activated receptor alpha isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_039621.8) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced gi:568991732. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGTGGACA CAGAGAGCCC CATCTGTCCT CTCTCCCCAC TGGAGGCAGA TGACCTGGAA 
AGTCCCTTAT CTGAAGAATT CTTACAAGAA ATGGGAAACA TTCAAGAGAT TTCTCAGTCC
ATCGGTGAGG AGAGCTCTGG AAGCTTTGGT TTTGCAGACT ACCAGTACTT AGGAAGCTGT
CCGGGCTCCG AGGGCTCTGT CATCACAGAC ACCCTCTCTC CAGCTTCCAG CCCTTCCTCA
GTCAGCTGCC CCGTGATCCC CGCCAGCACG GACGAGTCCC CCGGCAGTGC CCTGAACATC
GAGTGTCGAA TATGTGGGGA CAAGGCCTCA GGGTACCACT ACGGAGTTCA CGCATGTGAA
GGCTGTAAGG GCTTCTTTCG GCGAACTATT CGGCTGAAGC TGGTGTACGA CAAGTGTGAT
CGGAGCTGCA AGATTCAGAA GAAGAACCGG AACAAATGCC AGTACTGCCG TTTTCACAAG
TGCCTGTCTG TCGGGATGTC ACACAATGCA ATTCGCTTTG GAAGAATGCC AAGATCTGAA
AAAGCAAAAC TGAAAGCAGA AATTCTTACC TGTGAACACG ACCTGAAAGA TTCGGAAACT
GCAGACCTCA AATCTCTGGG CAAGAGAATC CACGAAGCCT ACCTGAAGAA CTTCAACATG
AACAAGGTCA AGGCCCGGGT CATACTCGCG GGAAAGACCA GCAACAACCC GCCTTTTGTC
ATACATGACA TGGAGACCTT GTGTATGGCC GAGAAGACGC TTGTGGCCAA GATGGTGGCC
AACGGCGTCG AAGACAAAGA GGCAGAGGTC CGATTCTTCC ACTGCTGCCA GTGCATGTCC
GTGGAGACCG TCACGGAGCT CACAGAATTT GCCAAGGCTA TCCCAGGCTT TGCAAACTTG
GACTTGAACG ACCAAGTCAC CTTGCTAAAG TACGGTGTGT ATGAAGCCAT CTTCACGATG
CTGTCCTCCT TGATGAACAA AGACGGGATG CTGATCGCGT ACGGCAATGG CTTTATCACA
CGCGAGTTCC TTAAGAACCT GAGGAAGCCG TTCTGTGACA TCATGGAACC CAAGTTTGAC
TTCGCTATGA AGTTCAATGC CTTAGAACTG GATGACAGTG ACATTTCCCT GTTTGTGGCT
GCTATAATTT GCTGTGGAGA TCGGCCTGGC CTTCTAAACA TAGGCTACAT TGAGAAGTTG
CAGGAGGGGA TTGTGCACGT GCTTAAGCTC CACCTGCAGA GCAACCATCC AGATGACACC
TTCCTCTTCC CAAAGCTCCT TCAAAAAATG GTGGACCTTC GGCAGCTGGT CACGGAGCAT
GCGCAGCTCG TACAGGTCAT CAAGAAGACC GAGTCCGACG CAGCGCTGCA CCCACTGTTG
CAAGAGATCT ACAGAGACAT GTACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006520685.1
CDS1145..2551
Misc Feature(1)1445..1696(+)
Misc Feature(2)1448..1612(+)
Misc Feature(3)1472..1675(+)
Misc Feature(4)1586..1600(+)
Misc Feature(5)1745..2545(+)
Misc Feature(6)1967..2464(+)
Misc Feature(7)1997..2074(+)
Misc Feature(8)2234..2470(+)
Translation

Target ORF information:

RefSeq Version XM_006520622
Organism Mus musculus (house mouse)
Definition PREDICTED: Mus musculus peroxisome proliferator activated receptor alpha (Ppara), transcript variant X8, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_006520622

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGTGGACA CAGAGAGCCC CATCTGTCCT CTCTCCCCAC TGGAGGCAGA TGACCTGGAA 
AGTCCCTTAT CTGAAGAATT CTTACAAGAA ATGGGAAACA TTCAAGAGAT TTCTCAGTCC
ATCGGTGAGG AGAGCTCTGG AAGCTTTGGT TTTGCAGACT ACCAGTACTT AGGAAGCTGT
CCGGGCTCCG AGGGCTCTGT CATCACAGAC ACCCTCTCTC CAGCTTCCAG CCCTTCCTCA
GTCAGCTGCC CCGTGATCCC CGCCAGCACG GACGAGTCCC CCGGCAGTGC CCTGAACATC
GAGTGTCGAA TATGTGGGGA CAAGGCCTCA GGGTACCACT ACGGAGTTCA CGCATGTGAA
GGCTGTAAGG GCTTCTTTCG GCGAACTATT CGGCTGAAGC TGGTGTACGA CAAGTGTGAT
CGGAGCTGCA AGATTCAGAA GAAGAACCGG AACAAATGCC AGTACTGCCG TTTTCACAAG
TGCCTGTCTG TCGGGATGTC ACACAATGCA ATTCGCTTTG GAAGAATGCC AAGATCTGAA
AAAGCAAAAC TGAAAGCAGA AATTCTTACC TGTGAACACG ACCTGAAAGA TTCGGAAACT
GCAGACCTCA AATCTCTGGG CAAGAGAATC CACGAAGCCT ACCTGAAGAA CTTCAACATG
AACAAGGTCA AGGCCCGGGT CATACTCGCG GGAAAGACCA GCAACAACCC GCCTTTTGTC
ATACATGACA TGGAGACCTT GTGTATGGCC GAGAAGACGC TTGTGGCCAA GATGGTGGCC
AACGGCGTCG AAGACAAAGA GGCAGAGGTC CGATTCTTCC ACTGCTGCCA GTGCATGTCC
GTGGAGACCG TCACGGAGCT CACAGAATTT GCCAAGGCTA TCCCAGGCTT TGCAAACTTG
GACTTGAACG ACCAAGTCAC CTTGCTAAAG TACGGTGTGT ATGAAGCCAT CTTCACGATG
CTGTCCTCCT TGATGAACAA AGACGGGATG CTGATCGCGT ACGGCAATGG CTTTATCACA
CGCGAGTTCC TTAAGAACCT GAGGAAGCCG TTCTGTGACA TCATGGAACC CAAGTTTGAC
TTCGCTATGA AGTTCAATGC CTTAGAACTG GATGACAGTG ACATTTCCCT GTTTGTGGCT
GCTATAATTT GCTGTGGAGA TCGGCCTGGC CTTCTAAACA TAGGCTACAT TGAGAAGTTG
CAGGAGGGGA TTGTGCACGT GCTTAAGCTC CACCTGCAGA GCAACCATCC AGATGACACC
TTCCTCTTCC CAAAGCTCCT TCAAAAAATG GTGGACCTTC GGCAGCTGGT CACGGAGCAT
GCGCAGCTCG TACAGGTCAT CAAGAAGACC GAGTCCGACG CAGCGCTGCA CCCACTGTTG
CAAGAGATCT ACAGAGACAT GTACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu22504
Clone ID Related Accession (Same CDS sequence) NM_001113418 , NM_011144 , XM_006520619 , XM_006520620 , XM_006520621 , XM_006520622 , XM_006520623 , XM_011245516 , XM_011245517 , XM_011245518 , XM_011245519
Accession Version XM_006520623.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1407bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 09-FEB-2015
Organism Mus musculus (house mouse)
Product peroxisome proliferator-activated receptor alpha isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_039621.8) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced gi:568991734. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGTGGACA CAGAGAGCCC CATCTGTCCT CTCTCCCCAC TGGAGGCAGA TGACCTGGAA 
AGTCCCTTAT CTGAAGAATT CTTACAAGAA ATGGGAAACA TTCAAGAGAT TTCTCAGTCC
ATCGGTGAGG AGAGCTCTGG AAGCTTTGGT TTTGCAGACT ACCAGTACTT AGGAAGCTGT
CCGGGCTCCG AGGGCTCTGT CATCACAGAC ACCCTCTCTC CAGCTTCCAG CCCTTCCTCA
GTCAGCTGCC CCGTGATCCC CGCCAGCACG GACGAGTCCC CCGGCAGTGC CCTGAACATC
GAGTGTCGAA TATGTGGGGA CAAGGCCTCA GGGTACCACT ACGGAGTTCA CGCATGTGAA
GGCTGTAAGG GCTTCTTTCG GCGAACTATT CGGCTGAAGC TGGTGTACGA CAAGTGTGAT
CGGAGCTGCA AGATTCAGAA GAAGAACCGG AACAAATGCC AGTACTGCCG TTTTCACAAG
TGCCTGTCTG TCGGGATGTC ACACAATGCA ATTCGCTTTG GAAGAATGCC AAGATCTGAA
AAAGCAAAAC TGAAAGCAGA AATTCTTACC TGTGAACACG ACCTGAAAGA TTCGGAAACT
GCAGACCTCA AATCTCTGGG CAAGAGAATC CACGAAGCCT ACCTGAAGAA CTTCAACATG
AACAAGGTCA AGGCCCGGGT CATACTCGCG GGAAAGACCA GCAACAACCC GCCTTTTGTC
ATACATGACA TGGAGACCTT GTGTATGGCC GAGAAGACGC TTGTGGCCAA GATGGTGGCC
AACGGCGTCG AAGACAAAGA GGCAGAGGTC CGATTCTTCC ACTGCTGCCA GTGCATGTCC
GTGGAGACCG TCACGGAGCT CACAGAATTT GCCAAGGCTA TCCCAGGCTT TGCAAACTTG
GACTTGAACG ACCAAGTCAC CTTGCTAAAG TACGGTGTGT ATGAAGCCAT CTTCACGATG
CTGTCCTCCT TGATGAACAA AGACGGGATG CTGATCGCGT ACGGCAATGG CTTTATCACA
CGCGAGTTCC TTAAGAACCT GAGGAAGCCG TTCTGTGACA TCATGGAACC CAAGTTTGAC
TTCGCTATGA AGTTCAATGC CTTAGAACTG GATGACAGTG ACATTTCCCT GTTTGTGGCT
GCTATAATTT GCTGTGGAGA TCGGCCTGGC CTTCTAAACA TAGGCTACAT TGAGAAGTTG
CAGGAGGGGA TTGTGCACGT GCTTAAGCTC CACCTGCAGA GCAACCATCC AGATGACACC
TTCCTCTTCC CAAAGCTCCT TCAAAAAATG GTGGACCTTC GGCAGCTGGT CACGGAGCAT
GCGCAGCTCG TACAGGTCAT CAAGAAGACC GAGTCCGACG CAGCGCTGCA CCCACTGTTG
CAAGAGATCT ACAGAGACAT GTACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006520686.1
CDS818..2224
Misc Feature(1)1118..1369(+)
Misc Feature(2)1121..1285(+)
Misc Feature(3)1145..1348(+)
Misc Feature(4)1259..1273(+)
Misc Feature(5)1418..2218(+)
Misc Feature(6)1640..2137(+)
Misc Feature(7)1670..1747(+)
Misc Feature(8)1907..2143(+)
Translation

Target ORF information:

RefSeq Version XM_006520623
Organism Mus musculus (house mouse)
Definition PREDICTED: Mus musculus peroxisome proliferator activated receptor alpha (Ppara), transcript variant X9, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_006520623

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGTGGACA CAGAGAGCCC CATCTGTCCT CTCTCCCCAC TGGAGGCAGA TGACCTGGAA 
AGTCCCTTAT CTGAAGAATT CTTACAAGAA ATGGGAAACA TTCAAGAGAT TTCTCAGTCC
ATCGGTGAGG AGAGCTCTGG AAGCTTTGGT TTTGCAGACT ACCAGTACTT AGGAAGCTGT
CCGGGCTCCG AGGGCTCTGT CATCACAGAC ACCCTCTCTC CAGCTTCCAG CCCTTCCTCA
GTCAGCTGCC CCGTGATCCC CGCCAGCACG GACGAGTCCC CCGGCAGTGC CCTGAACATC
GAGTGTCGAA TATGTGGGGA CAAGGCCTCA GGGTACCACT ACGGAGTTCA CGCATGTGAA
GGCTGTAAGG GCTTCTTTCG GCGAACTATT CGGCTGAAGC TGGTGTACGA CAAGTGTGAT
CGGAGCTGCA AGATTCAGAA GAAGAACCGG AACAAATGCC AGTACTGCCG TTTTCACAAG
TGCCTGTCTG TCGGGATGTC ACACAATGCA ATTCGCTTTG GAAGAATGCC AAGATCTGAA
AAAGCAAAAC TGAAAGCAGA AATTCTTACC TGTGAACACG ACCTGAAAGA TTCGGAAACT
GCAGACCTCA AATCTCTGGG CAAGAGAATC CACGAAGCCT ACCTGAAGAA CTTCAACATG
AACAAGGTCA AGGCCCGGGT CATACTCGCG GGAAAGACCA GCAACAACCC GCCTTTTGTC
ATACATGACA TGGAGACCTT GTGTATGGCC GAGAAGACGC TTGTGGCCAA GATGGTGGCC
AACGGCGTCG AAGACAAAGA GGCAGAGGTC CGATTCTTCC ACTGCTGCCA GTGCATGTCC
GTGGAGACCG TCACGGAGCT CACAGAATTT GCCAAGGCTA TCCCAGGCTT TGCAAACTTG
GACTTGAACG ACCAAGTCAC CTTGCTAAAG TACGGTGTGT ATGAAGCCAT CTTCACGATG
CTGTCCTCCT TGATGAACAA AGACGGGATG CTGATCGCGT ACGGCAATGG CTTTATCACA
CGCGAGTTCC TTAAGAACCT GAGGAAGCCG TTCTGTGACA TCATGGAACC CAAGTTTGAC
TTCGCTATGA AGTTCAATGC CTTAGAACTG GATGACAGTG ACATTTCCCT GTTTGTGGCT
GCTATAATTT GCTGTGGAGA TCGGCCTGGC CTTCTAAACA TAGGCTACAT TGAGAAGTTG
CAGGAGGGGA TTGTGCACGT GCTTAAGCTC CACCTGCAGA GCAACCATCC AGATGACACC
TTCCTCTTCC CAAAGCTCCT TCAAAAAATG GTGGACCTTC GGCAGCTGGT CACGGAGCAT
GCGCAGCTCG TACAGGTCAT CAAGAAGACC GAGTCCGACG CAGCGCTGCA CCCACTGTTG
CAAGAGATCT ACAGAGACAT GTACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu51072
Clone ID Related Accession (Same CDS sequence) XM_006520624
Accession Version XM_006520624.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1404bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 09-FEB-2015
Organism Mus musculus (house mouse)
Product peroxisome proliferator-activated receptor alpha isoform X2
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_039621.8) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced gi:568991736. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGTGGACA CAGAGAGCCC CATCTGTCCT CTCTCCCCAC TGGAGGCAGA TGACCTGGAA 
AGTCCCTTAT CTGAAGAATT CTTACAAGAA ATGGGAAACA TTCAAGAGAT TTCTCAGTCC
ATCGGTGAGG AGAGCTCTGG AAGCTTTGGT TTTGCAGACT ACCAGTACTT AGGAAGCTGT
CCGGGCTCCG AGGGCTCTGT CATCACAGAC ACCCTCTCTC CAGCTTCCAG CCCTTCCTCA
GTCAGCTGCC CCGTGATCCC CGCCAGCACG GACGAGTCCC CCGGCAGTGC CCTGAACATC
GAGTGTCGAA TATGTGGGGA CAAGGCCTCA GGGTACCACT ACGGAGTTCA CGCATGTGAA
GGCTGTAAGG GCTTCTTTCG GCGAACTATT CGGCTGAAGC TGGTGTACGA CAAGTGTGAT
CGGAGCTGCA AGATTCAGAA GAAGAACCGG AACAAATGCC AGTACTGCCG TTTTCACAAG
TGCCTGTCTG TCGGGATGTC ACACAATGCA ATTCGCTTTG GAAGAATGCC AAGATCTGAA
AAAGCAAAAC TGAAAGCAGA AATTCTTACC TGTGAACACG ACCTGAAAGA TTCGGAAACT
GCAGACCTCA AATCTCTGGG CAAGAGAATC CACGAAGCCT ACCTGAAGAA CTTCAACATG
AACAAGGTCA AGGCCCGGGT CATACTCGCG GGAAAGACCA GCAACAACCC GCCTTTTGTC
ATACATGACA TGGAGACCTT GTGTATGGCC GAGAAGACGC TTGTGGCCAA GATGGTGGCC
AACGGCGTCG AAGACAAAGA GGCAGAGGTC CGATTCTTCC ACTGCTGCCA GTGCATGTCC
GTGGAGACCG TCACGGAGCT CACAGAATTT GCCAAGGCTA TCCCAGGCTT TGCAAACTTG
GACTTGAACG ACCAAGTCAC CTTGCTAAAG TACGGTGTGT ATGAAGCCAT CTTCACGATG
CTGTCCTCCT TGATGAACAA AGACGGGATG CTGATCGCGT ACGGCAATGG CTTTATCACA
CGCGAGTTCC TTAAGAACCT GAGGAAGCCG TTCTGTGACA TCATGGAACC CAAGTTTGAC
TTCGCTATGA AGTTCAATGC CTTAGAACTG GATGACAGTG ACATTTCCCT GTTTGTGGCT
GCTATAATTT GCTGTGGAGC TCCTTCAAAA AATGGTGGAC CTTCGGCAGC TGGTCACGGA
GCATGCGCAG CTCGTACAGG TCATCAAGAA GACCGAGTCC GACGCAGCGC TGCACCCACT
GTTGCAAGAG ATCTACAGAG ACATGTACTG ATCTTTCCTG AGATGGCAGG CCGTTGCCAC
TGTTCAGGGA CCTCCGAGGC CTGCGGCCCC ATACAGGAGA GCAGGGATTT GCACAGAGGG
CCTCCCTCCT ACGCTTGGGG ATGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006520687.1
CDS416..1819
Misc Feature(1)716..967(+)
Misc Feature(2)719..883(+)
Misc Feature(3)743..946(+)
Misc Feature(4)857..871(+)
Misc Feature(5)1016..>1573(+)
Misc Feature(6)1241..1489(+)
Misc Feature(7)1268..1345(+)
Translation

Target ORF information:

RefSeq Version XM_006520624
Organism Mus musculus (house mouse)
Definition PREDICTED: Mus musculus peroxisome proliferator activated receptor alpha (Ppara), transcript variant X10, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_006520624

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGTGGACA CAGAGAGCCC CATCTGTCCT CTCTCCCCAC TGGAGGCAGA TGACCTGGAA 
AGTCCCTTAT CTGAAGAATT CTTACAAGAA ATGGGAAACA TTCAAGAGAT TTCTCAGTCC
ATCGGTGAGG AGAGCTCTGG AAGCTTTGGT TTTGCAGACT ACCAGTACTT AGGAAGCTGT
CCGGGCTCCG AGGGCTCTGT CATCACAGAC ACCCTCTCTC CAGCTTCCAG CCCTTCCTCA
GTCAGCTGCC CCGTGATCCC CGCCAGCACG GACGAGTCCC CCGGCAGTGC CCTGAACATC
GAGTGTCGAA TATGTGGGGA CAAGGCCTCA GGGTACCACT ACGGAGTTCA CGCATGTGAA
GGCTGTAAGG GCTTCTTTCG GCGAACTATT CGGCTGAAGC TGGTGTACGA CAAGTGTGAT
CGGAGCTGCA AGATTCAGAA GAAGAACCGG AACAAATGCC AGTACTGCCG TTTTCACAAG
TGCCTGTCTG TCGGGATGTC ACACAATGCA ATTCGCTTTG GAAGAATGCC AAGATCTGAA
AAAGCAAAAC TGAAAGCAGA AATTCTTACC TGTGAACACG ACCTGAAAGA TTCGGAAACT
GCAGACCTCA AATCTCTGGG CAAGAGAATC CACGAAGCCT ACCTGAAGAA CTTCAACATG
AACAAGGTCA AGGCCCGGGT CATACTCGCG GGAAAGACCA GCAACAACCC GCCTTTTGTC
ATACATGACA TGGAGACCTT GTGTATGGCC GAGAAGACGC TTGTGGCCAA GATGGTGGCC
AACGGCGTCG AAGACAAAGA GGCAGAGGTC CGATTCTTCC ACTGCTGCCA GTGCATGTCC
GTGGAGACCG TCACGGAGCT CACAGAATTT GCCAAGGCTA TCCCAGGCTT TGCAAACTTG
GACTTGAACG ACCAAGTCAC CTTGCTAAAG TACGGTGTGT ATGAAGCCAT CTTCACGATG
CTGTCCTCCT TGATGAACAA AGACGGGATG CTGATCGCGT ACGGCAATGG CTTTATCACA
CGCGAGTTCC TTAAGAACCT GAGGAAGCCG TTCTGTGACA TCATGGAACC CAAGTTTGAC
TTCGCTATGA AGTTCAATGC CTTAGAACTG GATGACAGTG ACATTTCCCT GTTTGTGGCT
GCTATAATTT GCTGTGGAGC TCCTTCAAAA AATGGTGGAC CTTCGGCAGC TGGTCACGGA
GCATGCGCAG CTCGTACAGG TCATCAAGAA GACCGAGTCC GACGCAGCGC TGCACCCACT
GTTGCAAGAG ATCTACAGAG ACATGTACTG ATCTTTCCTG AGATGGCAGG CCGTTGCCAC
TGTTCAGGGA CCTCCGAGGC CTGCGGCCCC ATACAGGAGA GCAGGGATTT GCACAGAGGG
CCTCCCTCCT ACGCTTGGGG ATGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu22504
Clone ID Related Accession (Same CDS sequence) NM_001113418 , NM_011144 , XM_006520619 , XM_006520620 , XM_006520621 , XM_006520622 , XM_006520623 , XM_011245516 , XM_011245517 , XM_011245518 , XM_011245519
Accession Version NM_011144.6 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1407bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 15-FEB-2015
Organism Mus musculus (house mouse)
Product peroxisome proliferator-activated receptor alpha
Comment VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK035676.1, AC117784.13 and AI118064.1. On Jan 12, 2008 this sequence version replaced gi:158508624. Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 encode the same protein. Sequence Note: This RefSeq record was created from transcript and genomic sequence data because no single transcript was available for the full length of the gene. The extent of this transcript is supported by transcript alignments and orthologous data. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AK035676.1, BC016892.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGTGGACA CAGAGAGCCC CATCTGTCCT CTCTCCCCAC TGGAGGCAGA TGACCTGGAA 
AGTCCCTTAT CTGAAGAATT CTTACAAGAA ATGGGAAACA TTCAAGAGAT TTCTCAGTCC
ATCGGTGAGG AGAGCTCTGG AAGCTTTGGT TTTGCAGACT ACCAGTACTT AGGAAGCTGT
CCGGGCTCCG AGGGCTCTGT CATCACAGAC ACCCTCTCTC CAGCTTCCAG CCCTTCCTCA
GTCAGCTGCC CCGTGATCCC CGCCAGCACG GACGAGTCCC CCGGCAGTGC CCTGAACATC
GAGTGTCGAA TATGTGGGGA CAAGGCCTCA GGGTACCACT ACGGAGTTCA CGCATGTGAA
GGCTGTAAGG GCTTCTTTCG GCGAACTATT CGGCTGAAGC TGGTGTACGA CAAGTGTGAT
CGGAGCTGCA AGATTCAGAA GAAGAACCGG AACAAATGCC AGTACTGCCG TTTTCACAAG
TGCCTGTCTG TCGGGATGTC ACACAATGCA ATTCGCTTTG GAAGAATGCC AAGATCTGAA
AAAGCAAAAC TGAAAGCAGA AATTCTTACC TGTGAACACG ACCTGAAAGA TTCGGAAACT
GCAGACCTCA AATCTCTGGG CAAGAGAATC CACGAAGCCT ACCTGAAGAA CTTCAACATG
AACAAGGTCA AGGCCCGGGT CATACTCGCG GGAAAGACCA GCAACAACCC GCCTTTTGTC
ATACATGACA TGGAGACCTT GTGTATGGCC GAGAAGACGC TTGTGGCCAA GATGGTGGCC
AACGGCGTCG AAGACAAAGA GGCAGAGGTC CGATTCTTCC ACTGCTGCCA GTGCATGTCC
GTGGAGACCG TCACGGAGCT CACAGAATTT GCCAAGGCTA TCCCAGGCTT TGCAAACTTG
GACTTGAACG ACCAAGTCAC CTTGCTAAAG TACGGTGTGT ATGAAGCCAT CTTCACGATG
CTGTCCTCCT TGATGAACAA AGACGGGATG CTGATCGCGT ACGGCAATGG CTTTATCACA
CGCGAGTTCC TTAAGAACCT GAGGAAGCCG TTCTGTGACA TCATGGAACC CAAGTTTGAC
TTCGCTATGA AGTTCAATGC CTTAGAACTG GATGACAGTG ACATTTCCCT GTTTGTGGCT
GCTATAATTT GCTGTGGAGA TCGGCCTGGC CTTCTAAACA TAGGCTACAT TGAGAAGTTG
CAGGAGGGGA TTGTGCACGT GCTTAAGCTC CACCTGCAGA GCAACCATCC AGATGACACC
TTCCTCTTCC CAAAGCTCCT TCAAAAAATG GTGGACCTTC GGCAGCTGGT CACGGAGCAT
GCGCAGCTCG TACAGGTCAT CAAGAAGACC GAGTCCGACG CAGCGCTGCA CCCACTGTTG
CAAGAGATCT ACAGAGACAT GTACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_035274.2
CDS446..1852
Misc Feature(1)359..361(+)
Misc Feature(2)746..997(+)
Misc Feature(3)749..913(+)
Misc Feature(4)773..976(+)
Misc Feature(5)887..901(+)
Misc Feature(6)1046..1846(+)
Misc Feature(7)1268..1765(+)
Misc Feature(8)1283..1849(+)
Misc Feature(9)1298..1375(+)
Misc Feature(10)1355..1744(+)
Misc Feature(11)1535..1771(+)
Misc Feature(12)1742..1744(+)
Exon (1)1..321
Gene:Ppara
Gene Synonym:
Exon (2)322..406
Gene:Ppara
Gene Synonym:
Exon (3)407..653
Gene:Ppara
Gene Synonym:
Exon (4)654..814
Gene:Ppara
Gene Synonym:
Exon (5)815..953
Gene:Ppara
Gene Synonym:
Exon (6)954..1156
Gene:Ppara
Gene Synonym:
Exon (7)1157..1604
Gene:Ppara
Gene Synonym:
Exon (8)1605..7445
Gene:Ppara
Gene Synonym:
Translation

Target ORF information:

RefSeq Version NM_011144
Organism Mus musculus (house mouse)
Definition Mus musculus peroxisome proliferator activated receptor alpha (Ppara), transcript variant 1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_011144

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGTGGACA CAGAGAGCCC CATCTGTCCT CTCTCCCCAC TGGAGGCAGA TGACCTGGAA 
AGTCCCTTAT CTGAAGAATT CTTACAAGAA ATGGGAAACA TTCAAGAGAT TTCTCAGTCC
ATCGGTGAGG AGAGCTCTGG AAGCTTTGGT TTTGCAGACT ACCAGTACTT AGGAAGCTGT
CCGGGCTCCG AGGGCTCTGT CATCACAGAC ACCCTCTCTC CAGCTTCCAG CCCTTCCTCA
GTCAGCTGCC CCGTGATCCC CGCCAGCACG GACGAGTCCC CCGGCAGTGC CCTGAACATC
GAGTGTCGAA TATGTGGGGA CAAGGCCTCA GGGTACCACT ACGGAGTTCA CGCATGTGAA
GGCTGTAAGG GCTTCTTTCG GCGAACTATT CGGCTGAAGC TGGTGTACGA CAAGTGTGAT
CGGAGCTGCA AGATTCAGAA GAAGAACCGG AACAAATGCC AGTACTGCCG TTTTCACAAG
TGCCTGTCTG TCGGGATGTC ACACAATGCA ATTCGCTTTG GAAGAATGCC AAGATCTGAA
AAAGCAAAAC TGAAAGCAGA AATTCTTACC TGTGAACACG ACCTGAAAGA TTCGGAAACT
GCAGACCTCA AATCTCTGGG CAAGAGAATC CACGAAGCCT ACCTGAAGAA CTTCAACATG
AACAAGGTCA AGGCCCGGGT CATACTCGCG GGAAAGACCA GCAACAACCC GCCTTTTGTC
ATACATGACA TGGAGACCTT GTGTATGGCC GAGAAGACGC TTGTGGCCAA GATGGTGGCC
AACGGCGTCG AAGACAAAGA GGCAGAGGTC CGATTCTTCC ACTGCTGCCA GTGCATGTCC
GTGGAGACCG TCACGGAGCT CACAGAATTT GCCAAGGCTA TCCCAGGCTT TGCAAACTTG
GACTTGAACG ACCAAGTCAC CTTGCTAAAG TACGGTGTGT ATGAAGCCAT CTTCACGATG
CTGTCCTCCT TGATGAACAA AGACGGGATG CTGATCGCGT ACGGCAATGG CTTTATCACA
CGCGAGTTCC TTAAGAACCT GAGGAAGCCG TTCTGTGACA TCATGGAACC CAAGTTTGAC
TTCGCTATGA AGTTCAATGC CTTAGAACTG GATGACAGTG ACATTTCCCT GTTTGTGGCT
GCTATAATTT GCTGTGGAGA TCGGCCTGGC CTTCTAAACA TAGGCTACAT TGAGAAGTTG
CAGGAGGGGA TTGTGCACGT GCTTAAGCTC CACCTGCAGA GCAACCATCC AGATGACACC
TTCCTCTTCC CAAAGCTCCT TCAAAAAATG GTGGACCTTC GGCAGCTGGT CACGGAGCAT
GCGCAGCTCG TACAGGTCAT CAAGAAGACC GAGTCCGACG CAGCGCTGCA CCCACTGTTG
CAAGAGATCT ACAGAGACAT GTACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu22504
Clone ID Related Accession (Same CDS sequence) NM_001113418 , NM_011144 , XM_006520619 , XM_006520620 , XM_006520621 , XM_006520622 , XM_006520623 , XM_011245516 , XM_011245517 , XM_011245518 , XM_011245519
Accession Version NM_001113418.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1407bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 15-FEB-2015
Organism Mus musculus (house mouse)
Product peroxisome proliferator-activated receptor alpha
Comment VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK081709.1, AC117784.13 and AI118064.1. Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same protein. Sequence Note: This RefSeq record was created from transcript and genomic sequence data because no single transcript was available for the full length of the gene. The extent of this transcript is supported by transcript alignments and orthologous data. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AK081709.1, AK149460.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGTGGACA CAGAGAGCCC CATCTGTCCT CTCTCCCCAC TGGAGGCAGA TGACCTGGAA 
AGTCCCTTAT CTGAAGAATT CTTACAAGAA ATGGGAAACA TTCAAGAGAT TTCTCAGTCC
ATCGGTGAGG AGAGCTCTGG AAGCTTTGGT TTTGCAGACT ACCAGTACTT AGGAAGCTGT
CCGGGCTCCG AGGGCTCTGT CATCACAGAC ACCCTCTCTC CAGCTTCCAG CCCTTCCTCA
GTCAGCTGCC CCGTGATCCC CGCCAGCACG GACGAGTCCC CCGGCAGTGC CCTGAACATC
GAGTGTCGAA TATGTGGGGA CAAGGCCTCA GGGTACCACT ACGGAGTTCA CGCATGTGAA
GGCTGTAAGG GCTTCTTTCG GCGAACTATT CGGCTGAAGC TGGTGTACGA CAAGTGTGAT
CGGAGCTGCA AGATTCAGAA GAAGAACCGG AACAAATGCC AGTACTGCCG TTTTCACAAG
TGCCTGTCTG TCGGGATGTC ACACAATGCA ATTCGCTTTG GAAGAATGCC AAGATCTGAA
AAAGCAAAAC TGAAAGCAGA AATTCTTACC TGTGAACACG ACCTGAAAGA TTCGGAAACT
GCAGACCTCA AATCTCTGGG CAAGAGAATC CACGAAGCCT ACCTGAAGAA CTTCAACATG
AACAAGGTCA AGGCCCGGGT CATACTCGCG GGAAAGACCA GCAACAACCC GCCTTTTGTC
ATACATGACA TGGAGACCTT GTGTATGGCC GAGAAGACGC TTGTGGCCAA GATGGTGGCC
AACGGCGTCG AAGACAAAGA GGCAGAGGTC CGATTCTTCC ACTGCTGCCA GTGCATGTCC
GTGGAGACCG TCACGGAGCT CACAGAATTT GCCAAGGCTA TCCCAGGCTT TGCAAACTTG
GACTTGAACG ACCAAGTCAC CTTGCTAAAG TACGGTGTGT ATGAAGCCAT CTTCACGATG
CTGTCCTCCT TGATGAACAA AGACGGGATG CTGATCGCGT ACGGCAATGG CTTTATCACA
CGCGAGTTCC TTAAGAACCT GAGGAAGCCG TTCTGTGACA TCATGGAACC CAAGTTTGAC
TTCGCTATGA AGTTCAATGC CTTAGAACTG GATGACAGTG ACATTTCCCT GTTTGTGGCT
GCTATAATTT GCTGTGGAGA TCGGCCTGGC CTTCTAAACA TAGGCTACAT TGAGAAGTTG
CAGGAGGGGA TTGTGCACGT GCTTAAGCTC CACCTGCAGA GCAACCATCC AGATGACACC
TTCCTCTTCC CAAAGCTCCT TCAAAAAATG GTGGACCTTC GGCAGCTGGT CACGGAGCAT
GCGCAGCTCG TACAGGTCAT CAAGAAGACC GAGTCCGACG CAGCGCTGCA CCCACTGTTG
CAAGAGATCT ACAGAGACAT GTACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001106889.1
CDS208..1614
Misc Feature(1)121..123(+)
Misc Feature(2)508..759(+)
Misc Feature(3)511..675(+)
Misc Feature(4)535..738(+)
Misc Feature(5)649..663(+)
Misc Feature(6)808..1608(+)
Misc Feature(7)1030..1527(+)
Misc Feature(8)1045..1611(+)
Misc Feature(9)1060..1137(+)
Misc Feature(10)1117..1506(+)
Misc Feature(11)1297..1533(+)
Misc Feature(12)1504..1506(+)
Exon (1)1..83
Gene:Ppara
Gene Synonym:
Exon (2)84..168
Gene:Ppara
Gene Synonym:
Exon (3)169..415
Gene:Ppara
Gene Synonym:
Exon (4)416..576
Gene:Ppara
Gene Synonym:
Exon (5)577..715
Gene:Ppara
Gene Synonym:
Exon (6)716..918
Gene:Ppara
Gene Synonym:
Exon (7)919..1366
Gene:Ppara
Gene Synonym:
Exon (8)1367..7207
Gene:Ppara
Gene Synonym:
Translation

Target ORF information:

RefSeq Version NM_001113418
Organism Mus musculus (house mouse)
Definition Mus musculus peroxisome proliferator activated receptor alpha (Ppara), transcript variant 2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_001113418

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGGTGGACA CAGAGAGCCC CATCTGTCCT CTCTCCCCAC TGGAGGCAGA TGACCTGGAA 
AGTCCCTTAT CTGAAGAATT CTTACAAGAA ATGGGAAACA TTCAAGAGAT TTCTCAGTCC
ATCGGTGAGG AGAGCTCTGG AAGCTTTGGT TTTGCAGACT ACCAGTACTT AGGAAGCTGT
CCGGGCTCCG AGGGCTCTGT CATCACAGAC ACCCTCTCTC CAGCTTCCAG CCCTTCCTCA
GTCAGCTGCC CCGTGATCCC CGCCAGCACG GACGAGTCCC CCGGCAGTGC CCTGAACATC
GAGTGTCGAA TATGTGGGGA CAAGGCCTCA GGGTACCACT ACGGAGTTCA CGCATGTGAA
GGCTGTAAGG GCTTCTTTCG GCGAACTATT CGGCTGAAGC TGGTGTACGA CAAGTGTGAT
CGGAGCTGCA AGATTCAGAA GAAGAACCGG AACAAATGCC AGTACTGCCG TTTTCACAAG
TGCCTGTCTG TCGGGATGTC ACACAATGCA ATTCGCTTTG GAAGAATGCC AAGATCTGAA
AAAGCAAAAC TGAAAGCAGA AATTCTTACC TGTGAACACG ACCTGAAAGA TTCGGAAACT
GCAGACCTCA AATCTCTGGG CAAGAGAATC CACGAAGCCT ACCTGAAGAA CTTCAACATG
AACAAGGTCA AGGCCCGGGT CATACTCGCG GGAAAGACCA GCAACAACCC GCCTTTTGTC
ATACATGACA TGGAGACCTT GTGTATGGCC GAGAAGACGC TTGTGGCCAA GATGGTGGCC
AACGGCGTCG AAGACAAAGA GGCAGAGGTC CGATTCTTCC ACTGCTGCCA GTGCATGTCC
GTGGAGACCG TCACGGAGCT CACAGAATTT GCCAAGGCTA TCCCAGGCTT TGCAAACTTG
GACTTGAACG ACCAAGTCAC CTTGCTAAAG TACGGTGTGT ATGAAGCCAT CTTCACGATG
CTGTCCTCCT TGATGAACAA AGACGGGATG CTGATCGCGT ACGGCAATGG CTTTATCACA
CGCGAGTTCC TTAAGAACCT GAGGAAGCCG TTCTGTGACA TCATGGAACC CAAGTTTGAC
TTCGCTATGA AGTTCAATGC CTTAGAACTG GATGACAGTG ACATTTCCCT GTTTGTGGCT
GCTATAATTT GCTGTGGAGA TCGGCCTGGC CTTCTAAACA TAGGCTACAT TGAGAAGTTG
CAGGAGGGGA TTGTGCACGT GCTTAAGCTC CACCTGCAGA GCAACCATCC AGATGACACC
TTCCTCTTCC CAAAGCTCCT TCAAAAAATG GTGGACCTTC GGCAGCTGGT CACGGAGCAT
GCGCAGCTCG TACAGGTCAT CAAGAAGACC GAGTCCGACG CAGCGCTGCA CCCACTGTTG
CAAGAGATCT ACAGAGACAT GTACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

 
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