×

Barhl2 cDNA ORF clone, Rattus norvegicus (Norway rat)

Gene Symbol Barhl2
Entrez Gene ID 65050
Full Name BarH-like homeobox 2
Synonyms Barh, MBH1
General protein information
Preferred Names
barH-like 2 homeobox protein
Names
barH-like 2 homeobox protein
homeobox protein B-H1
bar-class homeodomain protein MBH1
BarH-class homeodomain transcription factor
Gene Type protein-coding
Organism Rattus norvegicus (Norway rat)
Genome

14

14p22

Summary potential regulator of mammalian neural bHLH genes [RGD, Feb 2006]. lac of sum

mRNA and Protein(s)

mRNA Protein Name
NM_022956 NP_075245 barH-like 2 homeobox protein


Homo sapiens (human) BARHL2 NP_064447.1
Pan troglodytes (chimpanzee) BARHL2 XP_003949506.1
Macaca mulatta (Rhesus monkey) BARHL2 XP_001089467.1
Canis lupus familiaris (dog) BARHL2 XP_853271.3
Bos taurus (cattle) BARHL2 NP_001179226.1
Mus musculus (house mouse) Barhl2 NP_001005477.1
Rattus norvegicus (Norway rat) Barhl2 NP_075245.1
Danio rerio (zebrafish) barhl2 NP_991303.1
Xenopus (Silurana) tropicalis (western clawed frog) barhl2 XP_002940151.1

Component

ID Name Evidence
GO:0005634 nucleus IEA
GO:0005634 nucleus ISO

Function

ID Name Evidence
GO:0003700 sequence-specific DNA binding transcription factor activity IDA
GO:0043565 sequence-specific DNA binding IEA

Process

ID Name Evidence
GO:0001709 cell fate determination IEA
GO:0001709 cell fate determination ISO
GO:0001764 neuron migration IEA
GO:0001764 neuron migration ISO
GO:0006351 transcription, DNA-dependent IDA
GO:0006357 regulation of transcription from RNA polymerase II promoter IDA
GO:0007275 multicellular organismal development IEA
GO:0007399 nervous system development IDA
GO:0030182 neuron differentiation ISO
GO:0030516 regulation of axon extension IEA
GO:0030516 regulation of axon extension ISO
GO:0045165 cell fate commitment ISO
GO:0045664 regulation of neuron differentiation TAS
GO:0045727 positive regulation of translation IEA
GO:0045727 positive regulation of translation ISO

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Barhl2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Barhl2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

CloneID RefSeq Accession Definition **Vector *Turnaround time Price Select
ORa06537 NM_022956 Rattus norvegicus BarH-like homeobox 2 (Barhl2), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $223.30
$319.00

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).


CloneID ORa06537
Accession Version NM_022956.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1155bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 10-AUG-2014
Organism Rattus norvegicus (Norway rat)
Product barH-like 2 homeobox protein
Comment PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB004056.1. On Aug 31, 2012 this sequence version replaced gi:12621135. Summary: potential regulator of mammalian neural bHLH genes [RGD, Feb 2006]. ##Evidence-Data-START## Transcript exon combination :: AB004056.1 [ECO:0000332] ##Evidence-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
ATGACAGCAA TGGAAGGGGC CAGCGGGTCG AGTTTTGGAA TAGACACGAT TTTGTCCGGT 
GCCGGTTCCG GCAGTCCGGG CATGATGAAC GGAGATTTCC GATCGCTCGG TGAAGCGAGG
ACCACGGATT TTAGGAGCCA GGCCACCCCG TCACCCTGTT CGGAGATTGA TACCGTGGGA
ACGGCGCCCT CTTCACCGAT CTCGGTCACC CTGGAGCCCC CGGAGCCGCA TCTTGTGACA
GACGGACCCC AGCATCACCA TCACCTCCAC CACGGCCAAC AGCCACCGCC ACCGTCCGCG
CCCCCCGCGC AAAGTTTGCA GCCTTCTCCC CAACAGCAAC CGCCGCCGCA GCCGCAGTCT
GCAGCCCAGC AACTGGGCTC GGCCGCCGCG GCCCCCAGGA CTTCCACCTC TTCCTTTTTA
ATTAAGGACA TCTTGGGAGA CAGCAAACCC CTGGCGGCTT GTGCACCCTA CAGCACCAGC
GTTTCTTCTC CTCATCACAC CCCGAAGCAG GAGTGCAACG CGGCGCACGA GAGCTTCAGG
CCAAAGCTGG AGCAGGAGGA CAGCAAAACC AAGCTGGACA AGAGGGAAGA CTCTCAGAGC
GACATCAAAT GCCACGGAAC AAAGGAGGAA GGAGACCGGG AGATTACAAG TAGCCGAGAG
AGTCCCCCTG TGAGAGCCAA GAAACCTCGA AAGGCCAGGA CAGCTTTCTC GGACCACCAG
CTCAATCAAC TGGAACGTAG CTTTGAGCGG CAGAAGTACC TCAGTGTACA GGACCGCATG
GACCTGGCAG CTGCACTCAA CCTCACTGAT ACCCAAGTCA AGACCTGGTA CCAGAACCGC
AGAACCAAGT GGAAGCGGCA GACTGCAGTG GGCCTGGAGT TGCTTGCCGA GGCGGGGAAC
TACTCCGCGC TGCAGAGGAT GTTTCCGTCG CCTTATTTCT ACCACCCAAG CCTGCTGGGG
AGCATGGACA GCACGACGGC GGCCGCGGCG GCCGCGGCAA TGTACAGCAG CATGTACCGA
ACTCCTCCTG CACCCCATCC GCAGCTGCAG CGGCCACTGG TGCCCCGCGT GCTCATCCAC
GGCCTGGGGC CTGGGGGACA GCCGGCCCTC AACCCTTTGT CCAACCCCAT CCCAGGCACC
CCGCATCCCC GGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeqNP_075245.1
CDS70..1224
Misc Feature(1)37..39(+)
Misc Feature(2)757..930(+)
Misc Feature(3)757..927(+)
Misc Feature(4)763..915(+)
Translation
Position Chain Variation Link
846 846 g, t dbSNP:8167878
1183 1183 c, t dbSNP:198035991

Target ORF information:

RefSeq Version NM_022956
Organism Rattus norvegicus (Norway rat)
Definition Rattus norvegicus BarH-like homeobox 2 (Barhl2), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_022956

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
ATGACAGCAA TGGAAGGGGC CAGCGGGTCG AGTTTTGGAA TAGACACGAT TTTGTCCGGT 
GCCGGTTCCG GCAGTCCGGG CATGATGAAC GGAGATTTCC GATCGCTCGG TGAAGCGAGG
ACCACGGATT TTAGGAGCCA GGCCACCCCG TCACCCTGTT CGGAGATTGA TACCGTGGGA
ACGGCGCCCT CTTCACCGAT CTCGGTCACC CTGGAGCCCC CGGAGCCGCA TCTTGTGACA
GACGGACCCC AGCATCACCA TCACCTCCAC CACGGCCAAC AGCCACCGCC ACCGTCCGCG
CCCCCCGCGC AAAGTTTGCA GCCTTCTCCC CAACAGCAAC CGCCGCCGCA GCCGCAGTCT
GCAGCCCAGC AACTGGGCTC GGCCGCCGCG GCCCCCAGGA CTTCCACCTC TTCCTTTTTA
ATTAAGGACA TCTTGGGAGA CAGCAAACCC CTGGCGGCTT GTGCACCCTA CAGCACCAGC
GTTTCTTCTC CTCATCACAC CCCGAAGCAG GAGTGCAACG CGGCGCACGA GAGCTTCAGG
CCAAAGCTGG AGCAGGAGGA CAGCAAAACC AAGCTGGACA AGAGGGAAGA CTCTCAGAGC
GACATCAAAT GCCACGGAAC AAAGGAGGAA GGAGACCGGG AGATTACAAG TAGCCGAGAG
AGTCCCCCTG TGAGAGCCAA GAAACCTCGA AAGGCCAGGA CAGCTTTCTC GGACCACCAG
CTCAATCAAC TGGAACGTAG CTTTGAGCGG CAGAAGTACC TCAGTGTACA GGACCGCATG
GACCTGGCAG CTGCACTCAA CCTCACTGAT ACCCAAGTCA AGACCTGGTA CCAGAACCGC
AGAACCAAGT GGAAGCGGCA GACTGCAGTG GGCCTGGAGT TGCTTGCCGA GGCGGGGAAC
TACTCCGCGC TGCAGAGGAT GTTTCCGTCG CCTTATTTCT ACCACCCAAG CCTGCTGGGG
AGCATGGACA GCACGACGGC GGCCGCGGCG GCCGCGGCAA TGTACAGCAG CATGTACCGA
ACTCCTCCTG CACCCCATCC GCAGCTGCAG CGGCCACTGG TGCCCCGCGT GCTCATCCAC
GGCCTGGGGC CTGGGGGACA GCCGGCCCTC AACCCTTTGT CCAACCCCAT CCCAGGCACC
CCGCATCCCC GGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

book

Mammalian BarH homologue is a potential regulator of neural bHLH genes
Dev. Biol. 199 (2), 216-225 (1998)
Saito T, Sawamoto K, Okano H, Anderson DJ and Mikoshiba K.


 
*
*
*
*