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Whsc1 cDNA ORF clone, Rattus norvegicus (Norway rat)

Gene Symbol Whsc1
Entrez Gene ID 680537
Full Name Wolf-Hirschhorn syndrome candidate 1
Synonyms RGD1565590
General protein information
Preferred Names
probable histone-lysine N-methyltransferase NSD2
Names
probable histone-lysine N-methyltransferase NSD2
NP_001178481.1
Gene Type protein-coding
Organism Rattus norvegicus (Norway rat)
Genome

14

14q21

Summary lac of sum
Disorder MIM:

Disorder Html:





The following Whsc1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Whsc1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

CloneID RefSeq Accession Definition **Vector *Turnaround time Price Select
ORa36339 XM_006251372 PREDICTED: Rattus norvegicus Wolf-Hirschhorn syndrome candidate 1 (Whsc1), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 Quote Price
ORa36339 XM_006251373 PREDICTED: Rattus norvegicus Wolf-Hirschhorn syndrome candidate 1 (Whsc1), transcript variant X2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 Quote Price
ORa36339 XM_006251376 PREDICTED: Rattus norvegicus Wolf-Hirschhorn syndrome candidate 1 (Whsc1), transcript variant X3, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 Quote Price
ORa36339 XM_006251374 PREDICTED: Rattus norvegicus Wolf-Hirschhorn syndrome candidate 1 (Whsc1), transcript variant X4, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 Quote Price
ORa36339 XM_006251375 PREDICTED: Rattus norvegicus Wolf-Hirschhorn syndrome candidate 1 (Whsc1), transcript variant X5, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 Quote Price
ORa36339 XM_006251377 PREDICTED: Rattus norvegicus Wolf-Hirschhorn syndrome candidate 1 (Whsc1), transcript variant X6, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 Quote Price
ORa36339 XM_008770363 PREDICTED: Rattus norvegicus Wolf-Hirschhorn syndrome candidate 1 (Whsc1), transcript variant X7, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 Quote Price
ORa36339 XM_008770364 PREDICTED: Rattus norvegicus Wolf-Hirschhorn syndrome candidate 1 (Whsc1), transcript variant X8, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 Quote Price
ORa36339 XM_006251378 PREDICTED: Rattus norvegicus Wolf-Hirschhorn syndrome candidate 1 (Whsc1), transcript variant X9, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 Quote Price
ORa36340 XM_006251379 PREDICTED: Rattus norvegicus Wolf-Hirschhorn syndrome candidate 1 (Whsc1), transcript variant X10, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $439.00
ORa06966 NM_001191552 Rattus norvegicus Wolf-Hirschhorn syndrome candidate 1 (Whsc1), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 Quote Price

*Business Day
**You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.


CloneID ORa36339
Accession Version XM_006251372.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 4098bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 07-AUG-2014
Organism Rattus norvegicus (Norway rat)
Product histone-lysine N-methyltransferase NSD2 isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_007905987.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced gi:564384609. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
ATGGAATTTA GCATCAGAAA AAGTCCTCTT TCTGTTCAGA AAGTTGTAAA GTGCATGAAG 
ATGAAGCAGG CACCAGAAAT CCTTGGCAGT GCAAATGGAA AGACTCAGAA CTGTGAAGTG
AATCACGAAT GTTCTGTATT CCTCAGCAAA GCTCAGCTTT CTAACAGCCT ACAGGAGGGG
GTCATGCAGA AATTTAACGG GCATGATGCA CTCCCCTTTC TTCCAGCAGA GAAGTTGAAA
GATCTTACTT CTTGTGTGTT TAATGGAGAA CCTGGTGCTC ATGATACTAA GTTGTGTTTT
GAGACCCAGG AAGTAAAAGG AATTGGGACA CCACCCAATA CTACTCCTAT CAAAAATGGC
TCTCCAGAAA TTAAACTGAA AATCACCAAA ACATACATGA ATGGGAAACC TCTCTTTGAA
TCTTCAATTT GTGGTGATGG CGCTGCTGAT ATGTCTCAGT CAGAAGAAAA TGGACAAAAA
TCGGATAATA AGACTAGGAG GAACAGGAAG AGGAGCATAA AATATGACTC TTTGCTGGAG
CAGGGCCTTG TGGAAGCAGC TTTAGTGTCC AAGATCTCAA GTCCTGAAGA TAAAAAGATT
CCAGTTAAGA AGGAGTCCTG TCCAAATAGT GGCAGAGACA GAGACCTCTT GTTAAAATAC
AACGTTGGTG ATTTGGTGTG GTCCAAAGTG TCAGGTTACC CTTGGTGGCC TTGCATGGTT
TCTGCTGATC CACTCCTTCA CAATCATACC AAACTTAAAG GTCAGAAAAA AAGTGCACGC
CAGTATCATG TACAATTCTT TGGTGATGCC CCAGAAAGAG CTTGGATATT TGAGAAGAGC
CTTGTTGCTT TTGAAGGAGA AGAACAATTT GAAAAATTAT GCCAAGAAAG TGCCAAGCAG
GCACCCACGA AAGCTGAGAA AATCAAGTTG TTGAAACCTA TTTCAGGGAG ATTGAGAGCC
CAGTGGGAAA TGGGCATTGT CCAGGCTGAG GAAGCTGCTA GCATGTCAGT AGAGGAGCGG
AAAGCCAAGT TTACTTTCCT TTATGTGGGG GACCAACTGC GCCTCAACCC TCAAGTGGCT
AAGGAGGCTG GCATTGCTAC AGAACCTTTG GGAGAAATGG TGGACTCTTC AGTGGCCAAT
GAAGAAGCTG CTGTAGACCC TGGGACTATG AGAGAAGAGG ACATTCCCGT AAAGAGAAGG
CGAAGAGCCA AAAGGTCTAG TTCTGCTGAG AACCAGGAAG GAGACCCCGG CACAGAAAAG
AGTACACCTC CAAAGATGGC GGATGCTGAA CCTAAGAGAG GCGTAGGTTC TCCTGCCGGG
AGGAAAAGGT CCACAGGATC TGCCTCACGG AGCAGAAAGG GAGACTCAGC AGCCCAGTTC
TTAGTCTTTT GTCAAAAACA CAGGGATGAG GTCGTAGCTG AACACCCAGA TGCCTCAGAG
GAGGAGATTG AAGAATTGCT TGGGTCCCAA TGGAGCATGC TCAATGAAAA GCAGAAAGCA
CGATATAATA CAAAGTTTTC CCTAATGATC TCTGCCCAGT CTGAAGAAGA CTCTGGAAAT
ACCAGTGGGA AAAAAAGGAC CCACACAAAA AGGACAGATG ACCCTCCTGA GGATGTGGAT
GTAGAAGACG CACCCAGGAA AAGACTTAGG ACAGATAAGC ACAGTCTTCG GAAGAGAGAG
ACAATCACCG ACAAAACGGC CAGAACGAGC TCGTACAAGG CTATAGAGGC AGCCTCCTCA
CTCAAGAGCC AGGCAGCAAC GAAAAATTTG TCTGATGCTT GCAAACCACT GAAGAAGCGA
AATCGGGCTT CTGCAACAGC GTCTTCAGCA CTTGGGTTTA ACAAAAGTTC ATCTCCTTCT
GCATCCTTAA CTGAGAATGA GGTCTCAGAC AACCCAGGAG ATGAACCGTC AGAGTCTCCG
TATGAAAGTG CAGATGAAAC ACAGACTGAA GCGTCCGTCT CATCTAAGAA ATCTGAAAGA
GGAATGGCTG CCAAAAAGGA GTACGTGTGT CAGCTGTGTG AGAAGACAGG CAGTCTCTTA
CTGTGTGAAG GCCCCTGTTG TGGAGCATTC CACTTAGCCT GCCTTGGACT TTCCCAGAGA
CCAGAAGGAA GATTCACCTG CACTGAATGT GCCTCAGGGA TTCACTCATG CTTCGTATGT
AAAGAAAGCA AGATGGAGGT GAAACGCTGT ATGGTAAACC AATGTGGAAA GTTTTACCAT
GAAGCCTGTG TGAAAAAATA CCCTCTCACT GTGTTTGAGA GCCGAGGCTT TCGCTGTCCT
CTCCACAGCT GTATGAGCTG CCATGCCTCA AACCCTTCAA ATCCGCGGCC ATCAAAAGGT
AAAATGATGC GGTGCGTCCG ATGCCCTGTC GCCTATCATG GCGGGGATGC CTGCCTGGCA
GCGGGATGTT CCGTGATTGC TTCTAACAGC ATAATCTGCA CAGGCCACTT CACTGCCCGC
AAGGGGAAGC GGCACCACAC TCATGTCAAT GTGAGCTGGT GCTTCGTGTG CTCCAAAGGG
GGAAGCCTTC TGTGCTGCGA GGCCTGTCCG GCAGCCTTCC ACCCTGATTG TTTGAGCATC
GAGATGCCTG ATGGCAGCTG GTTCTGCAAT GACTGCCGAG CTGGGAAGAA GCTCCACTTT
CAAGACATCA TTTGGGTCAA ACTTGGGAAC TACAGATGGT GGCCAGCAGA AGTTTGCCAT
CCCAAAAATG TTCCCCCAAA TATTCAGAAA ATGAAGCACG AGATTGGAGA ATTCCCTGTG
TTTTTCTTCG GGTCTAAAGA TTATTACTGG ACGCATCAGG CACGAGTGTT CCCATACATG
GAGGGGGACC GGGGCAGCCG CTACCAGGGG GTCAGAGGGA TTGGAAGAGT CTTCAAGAAC
GCATTGCAAG AAGCCGAAGC TCGTTTTAAT GAAATCAAAC TTCAGCGGGA AGCCCGAGAA
ACACAGGAGA GTGAGAGAAA GCCTCCACCA TACAAGCATA TCAAGGTGAA TAAACCTTAT
GGTAAAGTCC AGATCTATAC AGCTGACATT TCTGAAATCC CAAAATGCAA CTGTAAGCCC
ACGGATGAGA ACCCCTGTGG CTCTGATTCA GAGTGTCTAA ACAGGATGCT AATGTTTGAG
TGCCACCCGC AGGTGTGCCC TGCAGGGGAA TATTGCCAGA ACCAGTGTTT CACTAAGCGC
CAGTACCCGG AGACCAAGAT CATCAAGACC GATGGCAAAG GGTGGGGCCT GGTTGCCAAA
AGGGACATCA GAAAGGGAGA ATTTGTTAAT GAGTATGTTG GCGAACTGAT TGATGAAGAG
GAGTGTATGG CAAGAATCAA ATATGCACAT GAGAATGACA TCACTCACTT TTACATGCTC
ACCATAGACA AGGACCGCAT AATTGATGCT GGCCCCAAAG GGAATTACTC GCGGTTCATG
AACCATAGCT GCCAGCCCAA CTGTGAGACC CTGAAGTGGA CAGTGAATGG GGACACACGG
GTTGGCCTGT TTGCTGTGTG CGACATCCCT GCAGGTACAG AGCTGACTTT CAACTATAAC
CTCGATTGTT TGGGCAATGA AAAGACAGTC TGTCGGTGTG GAGCCTCCAA CTGTAGTGGG
TTCCTTGGAG ACAGACCAAA GACATCAACA TCCCTTTCTT CAGAGGAAAA GAGTAAAAAG
GCCAAGAAGA AAACCAGGAG GCGCAGAGCC AAGGGTGAAG GAAAGCGGCA GTCAGAGGAC
GAATGCTTCC GCTGTGGTGA TGGCGGACAA CTGGTGCTGT GTGACCGCAA GTTCTGCACC
AAGGCCTACC ACCTATCCTG CTTGGGCTTG GGCAAGCGGC CCTTTGGGAA GTGGGAATGT
CCTTGGCATC ACTGTGATGT GTGTGGCAAA CCTTCTACCT CATTTTGCCA CCTCTGCCCC
AACTCATTCT GTAAGGAACA CCAAGATGGG ACTGCTTTCC GCTCCACCCA GGATGGGCAA
TCCTACTGCT GTGAGCATGA CCTGAGGGCA GACTCTGCAA ATAATACCAA GACTGAGAAA
CCCTTTCTAG ACTCACTCAA GGCGAAGGGG AAGAGGAAGA AAAGGCGGTG CTGGCGAAGG
GTCACAGACG GCAAATAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeqXP_006251434.1
CDS711..4808
Misc Feature(1)1362..1721(+)
Misc Feature(2)1398..1526(+)
Misc Feature(3)2088..>2225(+)
Misc Feature(4)2088..2183(+)
Misc Feature(5)2346..2840(+)
Misc Feature(6)2715..2843(+)
Misc Feature(7)2715..2825(+)
Misc Feature(8)2718..2840(+)
Misc Feature(9)2856..2996(+)
Misc Feature(10)2856..2981(+)
Misc Feature(11)2859..2996(+)
Misc Feature(12)2997..3158(+)
Misc Feature(13)2997..3143(+)
Misc Feature(14)3000..3158(+)
Misc Feature(15)3207..3329(+)
Misc Feature(16)3207..3311(+)
Misc Feature(17)3210..3326(+)
Misc Feature(18)3342..3626(+)
Misc Feature(19)3372..3491(+)
Misc Feature(20)3744..3896(+)
Misc Feature(21)3897..4268(+)
Misc Feature(22)4431..4559(+)
Misc Feature(23)4431..4544(+)
Misc Feature(24)4434..4559(+)
Translation
Position Chain Variation Link

Target ORF information:

RefSeq Version XM_006251372
Organism Rattus norvegicus (Norway rat)
Definition PREDICTED: Rattus norvegicus Wolf-Hirschhorn syndrome candidate 1 (Whsc1), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_006251372

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
ATGGAATTTA GCATCAGAAA AAGTCCTCTT TCTGTTCAGA AAGTTGTAAA GTGCATGAAG 
ATGAAGCAGG CACCAGAAAT CCTTGGCAGT GCAAATGGAA AGACTCAGAA CTGTGAAGTG
AATCACGAAT GTTCTGTATT CCTCAGCAAA GCTCAGCTTT CTAACAGCCT ACAGGAGGGG
GTCATGCAGA AATTTAACGG GCATGATGCA CTCCCCTTTC TTCCAGCAGA GAAGTTGAAA
GATCTTACTT CTTGTGTGTT TAATGGAGAA CCTGGTGCTC ATGATACTAA GTTGTGTTTT
GAGACCCAGG AAGTAAAAGG AATTGGGACA CCACCCAATA CTACTCCTAT CAAAAATGGC
TCTCCAGAAA TTAAACTGAA AATCACCAAA ACATACATGA ATGGGAAACC TCTCTTTGAA
TCTTCAATTT GTGGTGATGG CGCTGCTGAT ATGTCTCAGT CAGAAGAAAA TGGACAAAAA
TCGGATAATA AGACTAGGAG GAACAGGAAG AGGAGCATAA AATATGACTC TTTGCTGGAG
CAGGGCCTTG TGGAAGCAGC TTTAGTGTCC AAGATCTCAA GTCCTGAAGA TAAAAAGATT
CCAGTTAAGA AGGAGTCCTG TCCAAATAGT GGCAGAGACA GAGACCTCTT GTTAAAATAC
AACGTTGGTG ATTTGGTGTG GTCCAAAGTG TCAGGTTACC CTTGGTGGCC TTGCATGGTT
TCTGCTGATC CACTCCTTCA CAATCATACC AAACTTAAAG GTCAGAAAAA AAGTGCACGC
CAGTATCATG TACAATTCTT TGGTGATGCC CCAGAAAGAG CTTGGATATT TGAGAAGAGC
CTTGTTGCTT TTGAAGGAGA AGAACAATTT GAAAAATTAT GCCAAGAAAG TGCCAAGCAG
GCACCCACGA AAGCTGAGAA AATCAAGTTG TTGAAACCTA TTTCAGGGAG ATTGAGAGCC
CAGTGGGAAA TGGGCATTGT CCAGGCTGAG GAAGCTGCTA GCATGTCAGT AGAGGAGCGG
AAAGCCAAGT TTACTTTCCT TTATGTGGGG GACCAACTGC GCCTCAACCC TCAAGTGGCT
AAGGAGGCTG GCATTGCTAC AGAACCTTTG GGAGAAATGG TGGACTCTTC AGTGGCCAAT
GAAGAAGCTG CTGTAGACCC TGGGACTATG AGAGAAGAGG ACATTCCCGT AAAGAGAAGG
CGAAGAGCCA AAAGGTCTAG TTCTGCTGAG AACCAGGAAG GAGACCCCGG CACAGAAAAG
AGTACACCTC CAAAGATGGC GGATGCTGAA CCTAAGAGAG GCGTAGGTTC TCCTGCCGGG
AGGAAAAGGT CCACAGGATC TGCCTCACGG AGCAGAAAGG GAGACTCAGC AGCCCAGTTC
TTAGTCTTTT GTCAAAAACA CAGGGATGAG GTCGTAGCTG AACACCCAGA TGCCTCAGAG
GAGGAGATTG AAGAATTGCT TGGGTCCCAA TGGAGCATGC TCAATGAAAA GCAGAAAGCA
CGATATAATA CAAAGTTTTC CCTAATGATC TCTGCCCAGT CTGAAGAAGA CTCTGGAAAT
ACCAGTGGGA AAAAAAGGAC CCACACAAAA AGGACAGATG ACCCTCCTGA GGATGTGGAT
GTAGAAGACG CACCCAGGAA AAGACTTAGG ACAGATAAGC ACAGTCTTCG GAAGAGAGAG
ACAATCACCG ACAAAACGGC CAGAACGAGC TCGTACAAGG CTATAGAGGC AGCCTCCTCA
CTCAAGAGCC AGGCAGCAAC GAAAAATTTG TCTGATGCTT GCAAACCACT GAAGAAGCGA
AATCGGGCTT CTGCAACAGC GTCTTCAGCA CTTGGGTTTA ACAAAAGTTC ATCTCCTTCT
GCATCCTTAA CTGAGAATGA GGTCTCAGAC AACCCAGGAG ATGAACCGTC AGAGTCTCCG
TATGAAAGTG CAGATGAAAC ACAGACTGAA GCGTCCGTCT CATCTAAGAA ATCTGAAAGA
GGAATGGCTG CCAAAAAGGA GTACGTGTGT CAGCTGTGTG AGAAGACAGG CAGTCTCTTA
CTGTGTGAAG GCCCCTGTTG TGGAGCATTC CACTTAGCCT GCCTTGGACT TTCCCAGAGA
CCAGAAGGAA GATTCACCTG CACTGAATGT GCCTCAGGGA TTCACTCATG CTTCGTATGT
AAAGAAAGCA AGATGGAGGT GAAACGCTGT ATGGTAAACC AATGTGGAAA GTTTTACCAT
GAAGCCTGTG TGAAAAAATA CCCTCTCACT GTGTTTGAGA GCCGAGGCTT TCGCTGTCCT
CTCCACAGCT GTATGAGCTG CCATGCCTCA AACCCTTCAA ATCCGCGGCC ATCAAAAGGT
AAAATGATGC GGTGCGTCCG ATGCCCTGTC GCCTATCATG GCGGGGATGC CTGCCTGGCA
GCGGGATGTT CCGTGATTGC TTCTAACAGC ATAATCTGCA CAGGCCACTT CACTGCCCGC
AAGGGGAAGC GGCACCACAC TCATGTCAAT GTGAGCTGGT GCTTCGTGTG CTCCAAAGGG
GGAAGCCTTC TGTGCTGCGA GGCCTGTCCG GCAGCCTTCC ACCCTGATTG TTTGAGCATC
GAGATGCCTG ATGGCAGCTG GTTCTGCAAT GACTGCCGAG CTGGGAAGAA GCTCCACTTT
CAAGACATCA TTTGGGTCAA ACTTGGGAAC TACAGATGGT GGCCAGCAGA AGTTTGCCAT
CCCAAAAATG TTCCCCCAAA TATTCAGAAA ATGAAGCACG AGATTGGAGA ATTCCCTGTG
TTTTTCTTCG GGTCTAAAGA TTATTACTGG ACGCATCAGG CACGAGTGTT CCCATACATG
GAGGGGGACC GGGGCAGCCG CTACCAGGGG GTCAGAGGGA TTGGAAGAGT CTTCAAGAAC
GCATTGCAAG AAGCCGAAGC TCGTTTTAAT GAAATCAAAC TTCAGCGGGA AGCCCGAGAA
ACACAGGAGA GTGAGAGAAA GCCTCCACCA TACAAGCATA TCAAGGTGAA TAAACCTTAT
GGTAAAGTCC AGATCTATAC AGCTGACATT TCTGAAATCC CAAAATGCAA CTGTAAGCCC
ACGGATGAGA ACCCCTGTGG CTCTGATTCA GAGTGTCTAA ACAGGATGCT AATGTTTGAG
TGCCACCCGC AGGTGTGCCC TGCAGGGGAA TATTGCCAGA ACCAGTGTTT CACTAAGCGC
CAGTACCCGG AGACCAAGAT CATCAAGACC GATGGCAAAG GGTGGGGCCT GGTTGCCAAA
AGGGACATCA GAAAGGGAGA ATTTGTTAAT GAGTATGTTG GCGAACTGAT TGATGAAGAG
GAGTGTATGG CAAGAATCAA ATATGCACAT GAGAATGACA TCACTCACTT TTACATGCTC
ACCATAGACA AGGACCGCAT AATTGATGCT GGCCCCAAAG GGAATTACTC GCGGTTCATG
AACCATAGCT GCCAGCCCAA CTGTGAGACC CTGAAGTGGA CAGTGAATGG GGACACACGG
GTTGGCCTGT TTGCTGTGTG CGACATCCCT GCAGGTACAG AGCTGACTTT CAACTATAAC
CTCGATTGTT TGGGCAATGA AAAGACAGTC TGTCGGTGTG GAGCCTCCAA CTGTAGTGGG
TTCCTTGGAG ACAGACCAAA GACATCAACA TCCCTTTCTT CAGAGGAAAA GAGTAAAAAG
GCCAAGAAGA AAACCAGGAG GCGCAGAGCC AAGGGTGAAG GAAAGCGGCA GTCAGAGGAC
GAATGCTTCC GCTGTGGTGA TGGCGGACAA CTGGTGCTGT GTGACCGCAA GTTCTGCACC
AAGGCCTACC ACCTATCCTG CTTGGGCTTG GGCAAGCGGC CCTTTGGGAA GTGGGAATGT
CCTTGGCATC ACTGTGATGT GTGTGGCAAA CCTTCTACCT CATTTTGCCA CCTCTGCCCC
AACTCATTCT GTAAGGAACA CCAAGATGGG ACTGCTTTCC GCTCCACCCA GGATGGGCAA
TCCTACTGCT GTGAGCATGA CCTGAGGGCA GACTCTGCAA ATAATACCAA GACTGAGAAA
CCCTTTCTAG ACTCACTCAA GGCGAAGGGG AAGAGGAAGA AAAGGCGGTG CTGGCGAAGG
GTCACAGACG GCAAATAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ORa36339
Accession Version XM_006251373.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 4098bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 07-AUG-2014
Organism Rattus norvegicus (Norway rat)
Product histone-lysine N-methyltransferase NSD2 isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_007905987.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced gi:564384611. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
ATGGAATTTA GCATCAGAAA AAGTCCTCTT TCTGTTCAGA AAGTTGTAAA GTGCATGAAG 
ATGAAGCAGG CACCAGAAAT CCTTGGCAGT GCAAATGGAA AGACTCAGAA CTGTGAAGTG
AATCACGAAT GTTCTGTATT CCTCAGCAAA GCTCAGCTTT CTAACAGCCT ACAGGAGGGG
GTCATGCAGA AATTTAACGG GCATGATGCA CTCCCCTTTC TTCCAGCAGA GAAGTTGAAA
GATCTTACTT CTTGTGTGTT TAATGGAGAA CCTGGTGCTC ATGATACTAA GTTGTGTTTT
GAGACCCAGG AAGTAAAAGG AATTGGGACA CCACCCAATA CTACTCCTAT CAAAAATGGC
TCTCCAGAAA TTAAACTGAA AATCACCAAA ACATACATGA ATGGGAAACC TCTCTTTGAA
TCTTCAATTT GTGGTGATGG CGCTGCTGAT ATGTCTCAGT CAGAAGAAAA TGGACAAAAA
TCGGATAATA AGACTAGGAG GAACAGGAAG AGGAGCATAA AATATGACTC TTTGCTGGAG
CAGGGCCTTG TGGAAGCAGC TTTAGTGTCC AAGATCTCAA GTCCTGAAGA TAAAAAGATT
CCAGTTAAGA AGGAGTCCTG TCCAAATAGT GGCAGAGACA GAGACCTCTT GTTAAAATAC
AACGTTGGTG ATTTGGTGTG GTCCAAAGTG TCAGGTTACC CTTGGTGGCC TTGCATGGTT
TCTGCTGATC CACTCCTTCA CAATCATACC AAACTTAAAG GTCAGAAAAA AAGTGCACGC
CAGTATCATG TACAATTCTT TGGTGATGCC CCAGAAAGAG CTTGGATATT TGAGAAGAGC
CTTGTTGCTT TTGAAGGAGA AGAACAATTT GAAAAATTAT GCCAAGAAAG TGCCAAGCAG
GCACCCACGA AAGCTGAGAA AATCAAGTTG TTGAAACCTA TTTCAGGGAG ATTGAGAGCC
CAGTGGGAAA TGGGCATTGT CCAGGCTGAG GAAGCTGCTA GCATGTCAGT AGAGGAGCGG
AAAGCCAAGT TTACTTTCCT TTATGTGGGG GACCAACTGC GCCTCAACCC TCAAGTGGCT
AAGGAGGCTG GCATTGCTAC AGAACCTTTG GGAGAAATGG TGGACTCTTC AGTGGCCAAT
GAAGAAGCTG CTGTAGACCC TGGGACTATG AGAGAAGAGG ACATTCCCGT AAAGAGAAGG
CGAAGAGCCA AAAGGTCTAG TTCTGCTGAG AACCAGGAAG GAGACCCCGG CACAGAAAAG
AGTACACCTC CAAAGATGGC GGATGCTGAA CCTAAGAGAG GCGTAGGTTC TCCTGCCGGG
AGGAAAAGGT CCACAGGATC TGCCTCACGG AGCAGAAAGG GAGACTCAGC AGCCCAGTTC
TTAGTCTTTT GTCAAAAACA CAGGGATGAG GTCGTAGCTG AACACCCAGA TGCCTCAGAG
GAGGAGATTG AAGAATTGCT TGGGTCCCAA TGGAGCATGC TCAATGAAAA GCAGAAAGCA
CGATATAATA CAAAGTTTTC CCTAATGATC TCTGCCCAGT CTGAAGAAGA CTCTGGAAAT
ACCAGTGGGA AAAAAAGGAC CCACACAAAA AGGACAGATG ACCCTCCTGA GGATGTGGAT
GTAGAAGACG CACCCAGGAA AAGACTTAGG ACAGATAAGC ACAGTCTTCG GAAGAGAGAG
ACAATCACCG ACAAAACGGC CAGAACGAGC TCGTACAAGG CTATAGAGGC AGCCTCCTCA
CTCAAGAGCC AGGCAGCAAC GAAAAATTTG TCTGATGCTT GCAAACCACT GAAGAAGCGA
AATCGGGCTT CTGCAACAGC GTCTTCAGCA CTTGGGTTTA ACAAAAGTTC ATCTCCTTCT
GCATCCTTAA CTGAGAATGA GGTCTCAGAC AACCCAGGAG ATGAACCGTC AGAGTCTCCG
TATGAAAGTG CAGATGAAAC ACAGACTGAA GCGTCCGTCT CATCTAAGAA ATCTGAAAGA
GGAATGGCTG CCAAAAAGGA GTACGTGTGT CAGCTGTGTG AGAAGACAGG CAGTCTCTTA
CTGTGTGAAG GCCCCTGTTG TGGAGCATTC CACTTAGCCT GCCTTGGACT TTCCCAGAGA
CCAGAAGGAA GATTCACCTG CACTGAATGT GCCTCAGGGA TTCACTCATG CTTCGTATGT
AAAGAAAGCA AGATGGAGGT GAAACGCTGT ATGGTAAACC AATGTGGAAA GTTTTACCAT
GAAGCCTGTG TGAAAAAATA CCCTCTCACT GTGTTTGAGA GCCGAGGCTT TCGCTGTCCT
CTCCACAGCT GTATGAGCTG CCATGCCTCA AACCCTTCAA ATCCGCGGCC ATCAAAAGGT
AAAATGATGC GGTGCGTCCG ATGCCCTGTC GCCTATCATG GCGGGGATGC CTGCCTGGCA
GCGGGATGTT CCGTGATTGC TTCTAACAGC ATAATCTGCA CAGGCCACTT CACTGCCCGC
AAGGGGAAGC GGCACCACAC TCATGTCAAT GTGAGCTGGT GCTTCGTGTG CTCCAAAGGG
GGAAGCCTTC TGTGCTGCGA GGCCTGTCCG GCAGCCTTCC ACCCTGATTG TTTGAGCATC
GAGATGCCTG ATGGCAGCTG GTTCTGCAAT GACTGCCGAG CTGGGAAGAA GCTCCACTTT
CAAGACATCA TTTGGGTCAA ACTTGGGAAC TACAGATGGT GGCCAGCAGA AGTTTGCCAT
CCCAAAAATG TTCCCCCAAA TATTCAGAAA ATGAAGCACG AGATTGGAGA ATTCCCTGTG
TTTTTCTTCG GGTCTAAAGA TTATTACTGG ACGCATCAGG CACGAGTGTT CCCATACATG
GAGGGGGACC GGGGCAGCCG CTACCAGGGG GTCAGAGGGA TTGGAAGAGT CTTCAAGAAC
GCATTGCAAG AAGCCGAAGC TCGTTTTAAT GAAATCAAAC TTCAGCGGGA AGCCCGAGAA
ACACAGGAGA GTGAGAGAAA GCCTCCACCA TACAAGCATA TCAAGGTGAA TAAACCTTAT
GGTAAAGTCC AGATCTATAC AGCTGACATT TCTGAAATCC CAAAATGCAA CTGTAAGCCC
ACGGATGAGA ACCCCTGTGG CTCTGATTCA GAGTGTCTAA ACAGGATGCT AATGTTTGAG
TGCCACCCGC AGGTGTGCCC TGCAGGGGAA TATTGCCAGA ACCAGTGTTT CACTAAGCGC
CAGTACCCGG AGACCAAGAT CATCAAGACC GATGGCAAAG GGTGGGGCCT GGTTGCCAAA
AGGGACATCA GAAAGGGAGA ATTTGTTAAT GAGTATGTTG GCGAACTGAT TGATGAAGAG
GAGTGTATGG CAAGAATCAA ATATGCACAT GAGAATGACA TCACTCACTT TTACATGCTC
ACCATAGACA AGGACCGCAT AATTGATGCT GGCCCCAAAG GGAATTACTC GCGGTTCATG
AACCATAGCT GCCAGCCCAA CTGTGAGACC CTGAAGTGGA CAGTGAATGG GGACACACGG
GTTGGCCTGT TTGCTGTGTG CGACATCCCT GCAGGTACAG AGCTGACTTT CAACTATAAC
CTCGATTGTT TGGGCAATGA AAAGACAGTC TGTCGGTGTG GAGCCTCCAA CTGTAGTGGG
TTCCTTGGAG ACAGACCAAA GACATCAACA TCCCTTTCTT CAGAGGAAAA GAGTAAAAAG
GCCAAGAAGA AAACCAGGAG GCGCAGAGCC AAGGGTGAAG GAAAGCGGCA GTCAGAGGAC
GAATGCTTCC GCTGTGGTGA TGGCGGACAA CTGGTGCTGT GTGACCGCAA GTTCTGCACC
AAGGCCTACC ACCTATCCTG CTTGGGCTTG GGCAAGCGGC CCTTTGGGAA GTGGGAATGT
CCTTGGCATC ACTGTGATGT GTGTGGCAAA CCTTCTACCT CATTTTGCCA CCTCTGCCCC
AACTCATTCT GTAAGGAACA CCAAGATGGG ACTGCTTTCC GCTCCACCCA GGATGGGCAA
TCCTACTGCT GTGAGCATGA CCTGAGGGCA GACTCTGCAA ATAATACCAA GACTGAGAAA
CCCTTTCTAG ACTCACTCAA GGCGAAGGGG AAGAGGAAGA AAAGGCGGTG CTGGCGAAGG
GTCACAGACG GCAAATAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeqXP_006251435.1
CDS666..4763
Misc Feature(1)1317..1676(+)
Misc Feature(2)1353..1481(+)
Misc Feature(3)2043..>2180(+)
Misc Feature(4)2043..2138(+)
Misc Feature(5)2301..2795(+)
Misc Feature(6)2670..2798(+)
Misc Feature(7)2670..2780(+)
Misc Feature(8)2673..2795(+)
Misc Feature(9)2811..2951(+)
Misc Feature(10)2811..2936(+)
Misc Feature(11)2814..2951(+)
Misc Feature(12)2952..3113(+)
Misc Feature(13)2952..3098(+)
Misc Feature(14)2955..3113(+)
Misc Feature(15)3162..3284(+)
Misc Feature(16)3162..3266(+)
Misc Feature(17)3165..3281(+)
Misc Feature(18)3297..3581(+)
Misc Feature(19)3327..3446(+)
Misc Feature(20)3699..3851(+)
Misc Feature(21)3852..4223(+)
Misc Feature(22)4386..4514(+)
Misc Feature(23)4386..4499(+)
Misc Feature(24)4389..4514(+)
Translation
Position Chain Variation Link

Target ORF information:

RefSeq Version XM_006251373
Organism Rattus norvegicus (Norway rat)
Definition PREDICTED: Rattus norvegicus Wolf-Hirschhorn syndrome candidate 1 (Whsc1), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_006251373

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
ATGGAATTTA GCATCAGAAA AAGTCCTCTT TCTGTTCAGA AAGTTGTAAA GTGCATGAAG 
ATGAAGCAGG CACCAGAAAT CCTTGGCAGT GCAAATGGAA AGACTCAGAA CTGTGAAGTG
AATCACGAAT GTTCTGTATT CCTCAGCAAA GCTCAGCTTT CTAACAGCCT ACAGGAGGGG
GTCATGCAGA AATTTAACGG GCATGATGCA CTCCCCTTTC TTCCAGCAGA GAAGTTGAAA
GATCTTACTT CTTGTGTGTT TAATGGAGAA CCTGGTGCTC ATGATACTAA GTTGTGTTTT
GAGACCCAGG AAGTAAAAGG AATTGGGACA CCACCCAATA CTACTCCTAT CAAAAATGGC
TCTCCAGAAA TTAAACTGAA AATCACCAAA ACATACATGA ATGGGAAACC TCTCTTTGAA
TCTTCAATTT GTGGTGATGG CGCTGCTGAT ATGTCTCAGT CAGAAGAAAA TGGACAAAAA
TCGGATAATA AGACTAGGAG GAACAGGAAG AGGAGCATAA AATATGACTC TTTGCTGGAG
CAGGGCCTTG TGGAAGCAGC TTTAGTGTCC AAGATCTCAA GTCCTGAAGA TAAAAAGATT
CCAGTTAAGA AGGAGTCCTG TCCAAATAGT GGCAGAGACA GAGACCTCTT GTTAAAATAC
AACGTTGGTG ATTTGGTGTG GTCCAAAGTG TCAGGTTACC CTTGGTGGCC TTGCATGGTT
TCTGCTGATC CACTCCTTCA CAATCATACC AAACTTAAAG GTCAGAAAAA AAGTGCACGC
CAGTATCATG TACAATTCTT TGGTGATGCC CCAGAAAGAG CTTGGATATT TGAGAAGAGC
CTTGTTGCTT TTGAAGGAGA AGAACAATTT GAAAAATTAT GCCAAGAAAG TGCCAAGCAG
GCACCCACGA AAGCTGAGAA AATCAAGTTG TTGAAACCTA TTTCAGGGAG ATTGAGAGCC
CAGTGGGAAA TGGGCATTGT CCAGGCTGAG GAAGCTGCTA GCATGTCAGT AGAGGAGCGG
AAAGCCAAGT TTACTTTCCT TTATGTGGGG GACCAACTGC GCCTCAACCC TCAAGTGGCT
AAGGAGGCTG GCATTGCTAC AGAACCTTTG GGAGAAATGG TGGACTCTTC AGTGGCCAAT
GAAGAAGCTG CTGTAGACCC TGGGACTATG AGAGAAGAGG ACATTCCCGT AAAGAGAAGG
CGAAGAGCCA AAAGGTCTAG TTCTGCTGAG AACCAGGAAG GAGACCCCGG CACAGAAAAG
AGTACACCTC CAAAGATGGC GGATGCTGAA CCTAAGAGAG GCGTAGGTTC TCCTGCCGGG
AGGAAAAGGT CCACAGGATC TGCCTCACGG AGCAGAAAGG GAGACTCAGC AGCCCAGTTC
TTAGTCTTTT GTCAAAAACA CAGGGATGAG GTCGTAGCTG AACACCCAGA TGCCTCAGAG
GAGGAGATTG AAGAATTGCT TGGGTCCCAA TGGAGCATGC TCAATGAAAA GCAGAAAGCA
CGATATAATA CAAAGTTTTC CCTAATGATC TCTGCCCAGT CTGAAGAAGA CTCTGGAAAT
ACCAGTGGGA AAAAAAGGAC CCACACAAAA AGGACAGATG ACCCTCCTGA GGATGTGGAT
GTAGAAGACG CACCCAGGAA AAGACTTAGG ACAGATAAGC ACAGTCTTCG GAAGAGAGAG
ACAATCACCG ACAAAACGGC CAGAACGAGC TCGTACAAGG CTATAGAGGC AGCCTCCTCA
CTCAAGAGCC AGGCAGCAAC GAAAAATTTG TCTGATGCTT GCAAACCACT GAAGAAGCGA
AATCGGGCTT CTGCAACAGC GTCTTCAGCA CTTGGGTTTA ACAAAAGTTC ATCTCCTTCT
GCATCCTTAA CTGAGAATGA GGTCTCAGAC AACCCAGGAG ATGAACCGTC AGAGTCTCCG
TATGAAAGTG CAGATGAAAC ACAGACTGAA GCGTCCGTCT CATCTAAGAA ATCTGAAAGA
GGAATGGCTG CCAAAAAGGA GTACGTGTGT CAGCTGTGTG AGAAGACAGG CAGTCTCTTA
CTGTGTGAAG GCCCCTGTTG TGGAGCATTC CACTTAGCCT GCCTTGGACT TTCCCAGAGA
CCAGAAGGAA GATTCACCTG CACTGAATGT GCCTCAGGGA TTCACTCATG CTTCGTATGT
AAAGAAAGCA AGATGGAGGT GAAACGCTGT ATGGTAAACC AATGTGGAAA GTTTTACCAT
GAAGCCTGTG TGAAAAAATA CCCTCTCACT GTGTTTGAGA GCCGAGGCTT TCGCTGTCCT
CTCCACAGCT GTATGAGCTG CCATGCCTCA AACCCTTCAA ATCCGCGGCC ATCAAAAGGT
AAAATGATGC GGTGCGTCCG ATGCCCTGTC GCCTATCATG GCGGGGATGC CTGCCTGGCA
GCGGGATGTT CCGTGATTGC TTCTAACAGC ATAATCTGCA CAGGCCACTT CACTGCCCGC
AAGGGGAAGC GGCACCACAC TCATGTCAAT GTGAGCTGGT GCTTCGTGTG CTCCAAAGGG
GGAAGCCTTC TGTGCTGCGA GGCCTGTCCG GCAGCCTTCC ACCCTGATTG TTTGAGCATC
GAGATGCCTG ATGGCAGCTG GTTCTGCAAT GACTGCCGAG CTGGGAAGAA GCTCCACTTT
CAAGACATCA TTTGGGTCAA ACTTGGGAAC TACAGATGGT GGCCAGCAGA AGTTTGCCAT
CCCAAAAATG TTCCCCCAAA TATTCAGAAA ATGAAGCACG AGATTGGAGA ATTCCCTGTG
TTTTTCTTCG GGTCTAAAGA TTATTACTGG ACGCATCAGG CACGAGTGTT CCCATACATG
GAGGGGGACC GGGGCAGCCG CTACCAGGGG GTCAGAGGGA TTGGAAGAGT CTTCAAGAAC
GCATTGCAAG AAGCCGAAGC TCGTTTTAAT GAAATCAAAC TTCAGCGGGA AGCCCGAGAA
ACACAGGAGA GTGAGAGAAA GCCTCCACCA TACAAGCATA TCAAGGTGAA TAAACCTTAT
GGTAAAGTCC AGATCTATAC AGCTGACATT TCTGAAATCC CAAAATGCAA CTGTAAGCCC
ACGGATGAGA ACCCCTGTGG CTCTGATTCA GAGTGTCTAA ACAGGATGCT AATGTTTGAG
TGCCACCCGC AGGTGTGCCC TGCAGGGGAA TATTGCCAGA ACCAGTGTTT CACTAAGCGC
CAGTACCCGG AGACCAAGAT CATCAAGACC GATGGCAAAG GGTGGGGCCT GGTTGCCAAA
AGGGACATCA GAAAGGGAGA ATTTGTTAAT GAGTATGTTG GCGAACTGAT TGATGAAGAG
GAGTGTATGG CAAGAATCAA ATATGCACAT GAGAATGACA TCACTCACTT TTACATGCTC
ACCATAGACA AGGACCGCAT AATTGATGCT GGCCCCAAAG GGAATTACTC GCGGTTCATG
AACCATAGCT GCCAGCCCAA CTGTGAGACC CTGAAGTGGA CAGTGAATGG GGACACACGG
GTTGGCCTGT TTGCTGTGTG CGACATCCCT GCAGGTACAG AGCTGACTTT CAACTATAAC
CTCGATTGTT TGGGCAATGA AAAGACAGTC TGTCGGTGTG GAGCCTCCAA CTGTAGTGGG
TTCCTTGGAG ACAGACCAAA GACATCAACA TCCCTTTCTT CAGAGGAAAA GAGTAAAAAG
GCCAAGAAGA AAACCAGGAG GCGCAGAGCC AAGGGTGAAG GAAAGCGGCA GTCAGAGGAC
GAATGCTTCC GCTGTGGTGA TGGCGGACAA CTGGTGCTGT GTGACCGCAA GTTCTGCACC
AAGGCCTACC ACCTATCCTG CTTGGGCTTG GGCAAGCGGC CCTTTGGGAA GTGGGAATGT
CCTTGGCATC ACTGTGATGT GTGTGGCAAA CCTTCTACCT CATTTTGCCA CCTCTGCCCC
AACTCATTCT GTAAGGAACA CCAAGATGGG ACTGCTTTCC GCTCCACCCA GGATGGGCAA
TCCTACTGCT GTGAGCATGA CCTGAGGGCA GACTCTGCAA ATAATACCAA GACTGAGAAA
CCCTTTCTAG ACTCACTCAA GGCGAAGGGG AAGAGGAAGA AAAGGCGGTG CTGGCGAAGG
GTCACAGACG GCAAATAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ORa36339
Accession Version XM_006251376.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 4098bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 07-AUG-2014
Organism Rattus norvegicus (Norway rat)
Product histone-lysine N-methyltransferase NSD2 isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_007905987.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced gi:564384617. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
ATGGAATTTA GCATCAGAAA AAGTCCTCTT TCTGTTCAGA AAGTTGTAAA GTGCATGAAG 
ATGAAGCAGG CACCAGAAAT CCTTGGCAGT GCAAATGGAA AGACTCAGAA CTGTGAAGTG
AATCACGAAT GTTCTGTATT CCTCAGCAAA GCTCAGCTTT CTAACAGCCT ACAGGAGGGG
GTCATGCAGA AATTTAACGG GCATGATGCA CTCCCCTTTC TTCCAGCAGA GAAGTTGAAA
GATCTTACTT CTTGTGTGTT TAATGGAGAA CCTGGTGCTC ATGATACTAA GTTGTGTTTT
GAGACCCAGG AAGTAAAAGG AATTGGGACA CCACCCAATA CTACTCCTAT CAAAAATGGC
TCTCCAGAAA TTAAACTGAA AATCACCAAA ACATACATGA ATGGGAAACC TCTCTTTGAA
TCTTCAATTT GTGGTGATGG CGCTGCTGAT ATGTCTCAGT CAGAAGAAAA TGGACAAAAA
TCGGATAATA AGACTAGGAG GAACAGGAAG AGGAGCATAA AATATGACTC TTTGCTGGAG
CAGGGCCTTG TGGAAGCAGC TTTAGTGTCC AAGATCTCAA GTCCTGAAGA TAAAAAGATT
CCAGTTAAGA AGGAGTCCTG TCCAAATAGT GGCAGAGACA GAGACCTCTT GTTAAAATAC
AACGTTGGTG ATTTGGTGTG GTCCAAAGTG TCAGGTTACC CTTGGTGGCC TTGCATGGTT
TCTGCTGATC CACTCCTTCA CAATCATACC AAACTTAAAG GTCAGAAAAA AAGTGCACGC
CAGTATCATG TACAATTCTT TGGTGATGCC CCAGAAAGAG CTTGGATATT TGAGAAGAGC
CTTGTTGCTT TTGAAGGAGA AGAACAATTT GAAAAATTAT GCCAAGAAAG TGCCAAGCAG
GCACCCACGA AAGCTGAGAA AATCAAGTTG TTGAAACCTA TTTCAGGGAG ATTGAGAGCC
CAGTGGGAAA TGGGCATTGT CCAGGCTGAG GAAGCTGCTA GCATGTCAGT AGAGGAGCGG
AAAGCCAAGT TTACTTTCCT TTATGTGGGG GACCAACTGC GCCTCAACCC TCAAGTGGCT
AAGGAGGCTG GCATTGCTAC AGAACCTTTG GGAGAAATGG TGGACTCTTC AGTGGCCAAT
GAAGAAGCTG CTGTAGACCC TGGGACTATG AGAGAAGAGG ACATTCCCGT AAAGAGAAGG
CGAAGAGCCA AAAGGTCTAG TTCTGCTGAG AACCAGGAAG GAGACCCCGG CACAGAAAAG
AGTACACCTC CAAAGATGGC GGATGCTGAA CCTAAGAGAG GCGTAGGTTC TCCTGCCGGG
AGGAAAAGGT CCACAGGATC TGCCTCACGG AGCAGAAAGG GAGACTCAGC AGCCCAGTTC
TTAGTCTTTT GTCAAAAACA CAGGGATGAG GTCGTAGCTG AACACCCAGA TGCCTCAGAG
GAGGAGATTG AAGAATTGCT TGGGTCCCAA TGGAGCATGC TCAATGAAAA GCAGAAAGCA
CGATATAATA CAAAGTTTTC CCTAATGATC TCTGCCCAGT CTGAAGAAGA CTCTGGAAAT
ACCAGTGGGA AAAAAAGGAC CCACACAAAA AGGACAGATG ACCCTCCTGA GGATGTGGAT
GTAGAAGACG CACCCAGGAA AAGACTTAGG ACAGATAAGC ACAGTCTTCG GAAGAGAGAG
ACAATCACCG ACAAAACGGC CAGAACGAGC TCGTACAAGG CTATAGAGGC AGCCTCCTCA
CTCAAGAGCC AGGCAGCAAC GAAAAATTTG TCTGATGCTT GCAAACCACT GAAGAAGCGA
AATCGGGCTT CTGCAACAGC GTCTTCAGCA CTTGGGTTTA ACAAAAGTTC ATCTCCTTCT
GCATCCTTAA CTGAGAATGA GGTCTCAGAC AACCCAGGAG ATGAACCGTC AGAGTCTCCG
TATGAAAGTG CAGATGAAAC ACAGACTGAA GCGTCCGTCT CATCTAAGAA ATCTGAAAGA
GGAATGGCTG CCAAAAAGGA GTACGTGTGT CAGCTGTGTG AGAAGACAGG CAGTCTCTTA
CTGTGTGAAG GCCCCTGTTG TGGAGCATTC CACTTAGCCT GCCTTGGACT TTCCCAGAGA
CCAGAAGGAA GATTCACCTG CACTGAATGT GCCTCAGGGA TTCACTCATG CTTCGTATGT
AAAGAAAGCA AGATGGAGGT GAAACGCTGT ATGGTAAACC AATGTGGAAA GTTTTACCAT
GAAGCCTGTG TGAAAAAATA CCCTCTCACT GTGTTTGAGA GCCGAGGCTT TCGCTGTCCT
CTCCACAGCT GTATGAGCTG CCATGCCTCA AACCCTTCAA ATCCGCGGCC ATCAAAAGGT
AAAATGATGC GGTGCGTCCG ATGCCCTGTC GCCTATCATG GCGGGGATGC CTGCCTGGCA
GCGGGATGTT CCGTGATTGC TTCTAACAGC ATAATCTGCA CAGGCCACTT CACTGCCCGC
AAGGGGAAGC GGCACCACAC TCATGTCAAT GTGAGCTGGT GCTTCGTGTG CTCCAAAGGG
GGAAGCCTTC TGTGCTGCGA GGCCTGTCCG GCAGCCTTCC ACCCTGATTG TTTGAGCATC
GAGATGCCTG ATGGCAGCTG GTTCTGCAAT GACTGCCGAG CTGGGAAGAA GCTCCACTTT
CAAGACATCA TTTGGGTCAA ACTTGGGAAC TACAGATGGT GGCCAGCAGA AGTTTGCCAT
CCCAAAAATG TTCCCCCAAA TATTCAGAAA ATGAAGCACG AGATTGGAGA ATTCCCTGTG
TTTTTCTTCG GGTCTAAAGA TTATTACTGG ACGCATCAGG CACGAGTGTT CCCATACATG
GAGGGGGACC GGGGCAGCCG CTACCAGGGG GTCAGAGGGA TTGGAAGAGT CTTCAAGAAC
GCATTGCAAG AAGCCGAAGC TCGTTTTAAT GAAATCAAAC TTCAGCGGGA AGCCCGAGAA
ACACAGGAGA GTGAGAGAAA GCCTCCACCA TACAAGCATA TCAAGGTGAA TAAACCTTAT
GGTAAAGTCC AGATCTATAC AGCTGACATT TCTGAAATCC CAAAATGCAA CTGTAAGCCC
ACGGATGAGA ACCCCTGTGG CTCTGATTCA GAGTGTCTAA ACAGGATGCT AATGTTTGAG
TGCCACCCGC AGGTGTGCCC TGCAGGGGAA TATTGCCAGA ACCAGTGTTT CACTAAGCGC
CAGTACCCGG AGACCAAGAT CATCAAGACC GATGGCAAAG GGTGGGGCCT GGTTGCCAAA
AGGGACATCA GAAAGGGAGA ATTTGTTAAT GAGTATGTTG GCGAACTGAT TGATGAAGAG
GAGTGTATGG CAAGAATCAA ATATGCACAT GAGAATGACA TCACTCACTT TTACATGCTC
ACCATAGACA AGGACCGCAT AATTGATGCT GGCCCCAAAG GGAATTACTC GCGGTTCATG
AACCATAGCT GCCAGCCCAA CTGTGAGACC CTGAAGTGGA CAGTGAATGG GGACACACGG
GTTGGCCTGT TTGCTGTGTG CGACATCCCT GCAGGTACAG AGCTGACTTT CAACTATAAC
CTCGATTGTT TGGGCAATGA AAAGACAGTC TGTCGGTGTG GAGCCTCCAA CTGTAGTGGG
TTCCTTGGAG ACAGACCAAA GACATCAACA TCCCTTTCTT CAGAGGAAAA GAGTAAAAAG
GCCAAGAAGA AAACCAGGAG GCGCAGAGCC AAGGGTGAAG GAAAGCGGCA GTCAGAGGAC
GAATGCTTCC GCTGTGGTGA TGGCGGACAA CTGGTGCTGT GTGACCGCAA GTTCTGCACC
AAGGCCTACC ACCTATCCTG CTTGGGCTTG GGCAAGCGGC CCTTTGGGAA GTGGGAATGT
CCTTGGCATC ACTGTGATGT GTGTGGCAAA CCTTCTACCT CATTTTGCCA CCTCTGCCCC
AACTCATTCT GTAAGGAACA CCAAGATGGG ACTGCTTTCC GCTCCACCCA GGATGGGCAA
TCCTACTGCT GTGAGCATGA CCTGAGGGCA GACTCTGCAA ATAATACCAA GACTGAGAAA
CCCTTTCTAG ACTCACTCAA GGCGAAGGGG AAGAGGAAGA AAAGGCGGTG CTGGCGAAGG
GTCACAGACG GCAAATAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeqXP_006251438.1
CDS669..4766
Misc Feature(1)1320..1679(+)
Misc Feature(2)1356..1484(+)
Misc Feature(3)2046..>2183(+)
Misc Feature(4)2046..2141(+)
Misc Feature(5)2304..2798(+)
Misc Feature(6)2673..2801(+)
Misc Feature(7)2673..2783(+)
Misc Feature(8)2676..2798(+)
Misc Feature(9)2814..2954(+)
Misc Feature(10)2814..2939(+)
Misc Feature(11)2817..2954(+)
Misc Feature(12)2955..3116(+)
Misc Feature(13)2955..3101(+)
Misc Feature(14)2958..3116(+)
Misc Feature(15)3165..3287(+)
Misc Feature(16)3165..3269(+)
Misc Feature(17)3168..3284(+)
Misc Feature(18)3300..3584(+)
Misc Feature(19)3330..3449(+)
Misc Feature(20)3702..3854(+)
Misc Feature(21)3855..4226(+)
Misc Feature(22)4389..4517(+)
Misc Feature(23)4389..4502(+)
Misc Feature(24)4392..4517(+)
Translation
Position Chain Variation Link

Target ORF information:

RefSeq Version XM_006251376
Organism Rattus norvegicus (Norway rat)
Definition PREDICTED: Rattus norvegicus Wolf-Hirschhorn syndrome candidate 1 (Whsc1), transcript variant X3, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_006251376

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
ATGGAATTTA GCATCAGAAA AAGTCCTCTT TCTGTTCAGA AAGTTGTAAA GTGCATGAAG 
ATGAAGCAGG CACCAGAAAT CCTTGGCAGT GCAAATGGAA AGACTCAGAA CTGTGAAGTG
AATCACGAAT GTTCTGTATT CCTCAGCAAA GCTCAGCTTT CTAACAGCCT ACAGGAGGGG
GTCATGCAGA AATTTAACGG GCATGATGCA CTCCCCTTTC TTCCAGCAGA GAAGTTGAAA
GATCTTACTT CTTGTGTGTT TAATGGAGAA CCTGGTGCTC ATGATACTAA GTTGTGTTTT
GAGACCCAGG AAGTAAAAGG AATTGGGACA CCACCCAATA CTACTCCTAT CAAAAATGGC
TCTCCAGAAA TTAAACTGAA AATCACCAAA ACATACATGA ATGGGAAACC TCTCTTTGAA
TCTTCAATTT GTGGTGATGG CGCTGCTGAT ATGTCTCAGT CAGAAGAAAA TGGACAAAAA
TCGGATAATA AGACTAGGAG GAACAGGAAG AGGAGCATAA AATATGACTC TTTGCTGGAG
CAGGGCCTTG TGGAAGCAGC TTTAGTGTCC AAGATCTCAA GTCCTGAAGA TAAAAAGATT
CCAGTTAAGA AGGAGTCCTG TCCAAATAGT GGCAGAGACA GAGACCTCTT GTTAAAATAC
AACGTTGGTG ATTTGGTGTG GTCCAAAGTG TCAGGTTACC CTTGGTGGCC TTGCATGGTT
TCTGCTGATC CACTCCTTCA CAATCATACC AAACTTAAAG GTCAGAAAAA AAGTGCACGC
CAGTATCATG TACAATTCTT TGGTGATGCC CCAGAAAGAG CTTGGATATT TGAGAAGAGC
CTTGTTGCTT TTGAAGGAGA AGAACAATTT GAAAAATTAT GCCAAGAAAG TGCCAAGCAG
GCACCCACGA AAGCTGAGAA AATCAAGTTG TTGAAACCTA TTTCAGGGAG ATTGAGAGCC
CAGTGGGAAA TGGGCATTGT CCAGGCTGAG GAAGCTGCTA GCATGTCAGT AGAGGAGCGG
AAAGCCAAGT TTACTTTCCT TTATGTGGGG GACCAACTGC GCCTCAACCC TCAAGTGGCT
AAGGAGGCTG GCATTGCTAC AGAACCTTTG GGAGAAATGG TGGACTCTTC AGTGGCCAAT
GAAGAAGCTG CTGTAGACCC TGGGACTATG AGAGAAGAGG ACATTCCCGT AAAGAGAAGG
CGAAGAGCCA AAAGGTCTAG TTCTGCTGAG AACCAGGAAG GAGACCCCGG CACAGAAAAG
AGTACACCTC CAAAGATGGC GGATGCTGAA CCTAAGAGAG GCGTAGGTTC TCCTGCCGGG
AGGAAAAGGT CCACAGGATC TGCCTCACGG AGCAGAAAGG GAGACTCAGC AGCCCAGTTC
TTAGTCTTTT GTCAAAAACA CAGGGATGAG GTCGTAGCTG AACACCCAGA TGCCTCAGAG
GAGGAGATTG AAGAATTGCT TGGGTCCCAA TGGAGCATGC TCAATGAAAA GCAGAAAGCA
CGATATAATA CAAAGTTTTC CCTAATGATC TCTGCCCAGT CTGAAGAAGA CTCTGGAAAT
ACCAGTGGGA AAAAAAGGAC CCACACAAAA AGGACAGATG ACCCTCCTGA GGATGTGGAT
GTAGAAGACG CACCCAGGAA AAGACTTAGG ACAGATAAGC ACAGTCTTCG GAAGAGAGAG
ACAATCACCG ACAAAACGGC CAGAACGAGC TCGTACAAGG CTATAGAGGC AGCCTCCTCA
CTCAAGAGCC AGGCAGCAAC GAAAAATTTG TCTGATGCTT GCAAACCACT GAAGAAGCGA
AATCGGGCTT CTGCAACAGC GTCTTCAGCA CTTGGGTTTA ACAAAAGTTC ATCTCCTTCT
GCATCCTTAA CTGAGAATGA GGTCTCAGAC AACCCAGGAG ATGAACCGTC AGAGTCTCCG
TATGAAAGTG CAGATGAAAC ACAGACTGAA GCGTCCGTCT CATCTAAGAA ATCTGAAAGA
GGAATGGCTG CCAAAAAGGA GTACGTGTGT CAGCTGTGTG AGAAGACAGG CAGTCTCTTA
CTGTGTGAAG GCCCCTGTTG TGGAGCATTC CACTTAGCCT GCCTTGGACT TTCCCAGAGA
CCAGAAGGAA GATTCACCTG CACTGAATGT GCCTCAGGGA TTCACTCATG CTTCGTATGT
AAAGAAAGCA AGATGGAGGT GAAACGCTGT ATGGTAAACC AATGTGGAAA GTTTTACCAT
GAAGCCTGTG TGAAAAAATA CCCTCTCACT GTGTTTGAGA GCCGAGGCTT TCGCTGTCCT
CTCCACAGCT GTATGAGCTG CCATGCCTCA AACCCTTCAA ATCCGCGGCC ATCAAAAGGT
AAAATGATGC GGTGCGTCCG ATGCCCTGTC GCCTATCATG GCGGGGATGC CTGCCTGGCA
GCGGGATGTT CCGTGATTGC TTCTAACAGC ATAATCTGCA CAGGCCACTT CACTGCCCGC
AAGGGGAAGC GGCACCACAC TCATGTCAAT GTGAGCTGGT GCTTCGTGTG CTCCAAAGGG
GGAAGCCTTC TGTGCTGCGA GGCCTGTCCG GCAGCCTTCC ACCCTGATTG TTTGAGCATC
GAGATGCCTG ATGGCAGCTG GTTCTGCAAT GACTGCCGAG CTGGGAAGAA GCTCCACTTT
CAAGACATCA TTTGGGTCAA ACTTGGGAAC TACAGATGGT GGCCAGCAGA AGTTTGCCAT
CCCAAAAATG TTCCCCCAAA TATTCAGAAA ATGAAGCACG AGATTGGAGA ATTCCCTGTG
TTTTTCTTCG GGTCTAAAGA TTATTACTGG ACGCATCAGG CACGAGTGTT CCCATACATG
GAGGGGGACC GGGGCAGCCG CTACCAGGGG GTCAGAGGGA TTGGAAGAGT CTTCAAGAAC
GCATTGCAAG AAGCCGAAGC TCGTTTTAAT GAAATCAAAC TTCAGCGGGA AGCCCGAGAA
ACACAGGAGA GTGAGAGAAA GCCTCCACCA TACAAGCATA TCAAGGTGAA TAAACCTTAT
GGTAAAGTCC AGATCTATAC AGCTGACATT TCTGAAATCC CAAAATGCAA CTGTAAGCCC
ACGGATGAGA ACCCCTGTGG CTCTGATTCA GAGTGTCTAA ACAGGATGCT AATGTTTGAG
TGCCACCCGC AGGTGTGCCC TGCAGGGGAA TATTGCCAGA ACCAGTGTTT CACTAAGCGC
CAGTACCCGG AGACCAAGAT CATCAAGACC GATGGCAAAG GGTGGGGCCT GGTTGCCAAA
AGGGACATCA GAAAGGGAGA ATTTGTTAAT GAGTATGTTG GCGAACTGAT TGATGAAGAG
GAGTGTATGG CAAGAATCAA ATATGCACAT GAGAATGACA TCACTCACTT TTACATGCTC
ACCATAGACA AGGACCGCAT AATTGATGCT GGCCCCAAAG GGAATTACTC GCGGTTCATG
AACCATAGCT GCCAGCCCAA CTGTGAGACC CTGAAGTGGA CAGTGAATGG GGACACACGG
GTTGGCCTGT TTGCTGTGTG CGACATCCCT GCAGGTACAG AGCTGACTTT CAACTATAAC
CTCGATTGTT TGGGCAATGA AAAGACAGTC TGTCGGTGTG GAGCCTCCAA CTGTAGTGGG
TTCCTTGGAG ACAGACCAAA GACATCAACA TCCCTTTCTT CAGAGGAAAA GAGTAAAAAG
GCCAAGAAGA AAACCAGGAG GCGCAGAGCC AAGGGTGAAG GAAAGCGGCA GTCAGAGGAC
GAATGCTTCC GCTGTGGTGA TGGCGGACAA CTGGTGCTGT GTGACCGCAA GTTCTGCACC
AAGGCCTACC ACCTATCCTG CTTGGGCTTG GGCAAGCGGC CCTTTGGGAA GTGGGAATGT
CCTTGGCATC ACTGTGATGT GTGTGGCAAA CCTTCTACCT CATTTTGCCA CCTCTGCCCC
AACTCATTCT GTAAGGAACA CCAAGATGGG ACTGCTTTCC GCTCCACCCA GGATGGGCAA
TCCTACTGCT GTGAGCATGA CCTGAGGGCA GACTCTGCAA ATAATACCAA GACTGAGAAA
CCCTTTCTAG ACTCACTCAA GGCGAAGGGG AAGAGGAAGA AAAGGCGGTG CTGGCGAAGG
GTCACAGACG GCAAATAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ORa36339
Accession Version XM_006251374.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 4098bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 07-AUG-2014
Organism Rattus norvegicus (Norway rat)
Product histone-lysine N-methyltransferase NSD2 isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_007905987.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced gi:564384613. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
ATGGAATTTA GCATCAGAAA AAGTCCTCTT TCTGTTCAGA AAGTTGTAAA GTGCATGAAG 
ATGAAGCAGG CACCAGAAAT CCTTGGCAGT GCAAATGGAA AGACTCAGAA CTGTGAAGTG
AATCACGAAT GTTCTGTATT CCTCAGCAAA GCTCAGCTTT CTAACAGCCT ACAGGAGGGG
GTCATGCAGA AATTTAACGG GCATGATGCA CTCCCCTTTC TTCCAGCAGA GAAGTTGAAA
GATCTTACTT CTTGTGTGTT TAATGGAGAA CCTGGTGCTC ATGATACTAA GTTGTGTTTT
GAGACCCAGG AAGTAAAAGG AATTGGGACA CCACCCAATA CTACTCCTAT CAAAAATGGC
TCTCCAGAAA TTAAACTGAA AATCACCAAA ACATACATGA ATGGGAAACC TCTCTTTGAA
TCTTCAATTT GTGGTGATGG CGCTGCTGAT ATGTCTCAGT CAGAAGAAAA TGGACAAAAA
TCGGATAATA AGACTAGGAG GAACAGGAAG AGGAGCATAA AATATGACTC TTTGCTGGAG
CAGGGCCTTG TGGAAGCAGC TTTAGTGTCC AAGATCTCAA GTCCTGAAGA TAAAAAGATT
CCAGTTAAGA AGGAGTCCTG TCCAAATAGT GGCAGAGACA GAGACCTCTT GTTAAAATAC
AACGTTGGTG ATTTGGTGTG GTCCAAAGTG TCAGGTTACC CTTGGTGGCC TTGCATGGTT
TCTGCTGATC CACTCCTTCA CAATCATACC AAACTTAAAG GTCAGAAAAA AAGTGCACGC
CAGTATCATG TACAATTCTT TGGTGATGCC CCAGAAAGAG CTTGGATATT TGAGAAGAGC
CTTGTTGCTT TTGAAGGAGA AGAACAATTT GAAAAATTAT GCCAAGAAAG TGCCAAGCAG
GCACCCACGA AAGCTGAGAA AATCAAGTTG TTGAAACCTA TTTCAGGGAG ATTGAGAGCC
CAGTGGGAAA TGGGCATTGT CCAGGCTGAG GAAGCTGCTA GCATGTCAGT AGAGGAGCGG
AAAGCCAAGT TTACTTTCCT TTATGTGGGG GACCAACTGC GCCTCAACCC TCAAGTGGCT
AAGGAGGCTG GCATTGCTAC AGAACCTTTG GGAGAAATGG TGGACTCTTC AGTGGCCAAT
GAAGAAGCTG CTGTAGACCC TGGGACTATG AGAGAAGAGG ACATTCCCGT AAAGAGAAGG
CGAAGAGCCA AAAGGTCTAG TTCTGCTGAG AACCAGGAAG GAGACCCCGG CACAGAAAAG
AGTACACCTC CAAAGATGGC GGATGCTGAA CCTAAGAGAG GCGTAGGTTC TCCTGCCGGG
AGGAAAAGGT CCACAGGATC TGCCTCACGG AGCAGAAAGG GAGACTCAGC AGCCCAGTTC
TTAGTCTTTT GTCAAAAACA CAGGGATGAG GTCGTAGCTG AACACCCAGA TGCCTCAGAG
GAGGAGATTG AAGAATTGCT TGGGTCCCAA TGGAGCATGC TCAATGAAAA GCAGAAAGCA
CGATATAATA CAAAGTTTTC CCTAATGATC TCTGCCCAGT CTGAAGAAGA CTCTGGAAAT
ACCAGTGGGA AAAAAAGGAC CCACACAAAA AGGACAGATG ACCCTCCTGA GGATGTGGAT
GTAGAAGACG CACCCAGGAA AAGACTTAGG ACAGATAAGC ACAGTCTTCG GAAGAGAGAG
ACAATCACCG ACAAAACGGC CAGAACGAGC TCGTACAAGG CTATAGAGGC AGCCTCCTCA
CTCAAGAGCC AGGCAGCAAC GAAAAATTTG TCTGATGCTT GCAAACCACT GAAGAAGCGA
AATCGGGCTT CTGCAACAGC GTCTTCAGCA CTTGGGTTTA ACAAAAGTTC ATCTCCTTCT
GCATCCTTAA CTGAGAATGA GGTCTCAGAC AACCCAGGAG ATGAACCGTC AGAGTCTCCG
TATGAAAGTG CAGATGAAAC ACAGACTGAA GCGTCCGTCT CATCTAAGAA ATCTGAAAGA
GGAATGGCTG CCAAAAAGGA GTACGTGTGT CAGCTGTGTG AGAAGACAGG CAGTCTCTTA
CTGTGTGAAG GCCCCTGTTG TGGAGCATTC CACTTAGCCT GCCTTGGACT TTCCCAGAGA
CCAGAAGGAA GATTCACCTG CACTGAATGT GCCTCAGGGA TTCACTCATG CTTCGTATGT
AAAGAAAGCA AGATGGAGGT GAAACGCTGT ATGGTAAACC AATGTGGAAA GTTTTACCAT
GAAGCCTGTG TGAAAAAATA CCCTCTCACT GTGTTTGAGA GCCGAGGCTT TCGCTGTCCT
CTCCACAGCT GTATGAGCTG CCATGCCTCA AACCCTTCAA ATCCGCGGCC ATCAAAAGGT
AAAATGATGC GGTGCGTCCG ATGCCCTGTC GCCTATCATG GCGGGGATGC CTGCCTGGCA
GCGGGATGTT CCGTGATTGC TTCTAACAGC ATAATCTGCA CAGGCCACTT CACTGCCCGC
AAGGGGAAGC GGCACCACAC TCATGTCAAT GTGAGCTGGT GCTTCGTGTG CTCCAAAGGG
GGAAGCCTTC TGTGCTGCGA GGCCTGTCCG GCAGCCTTCC ACCCTGATTG TTTGAGCATC
GAGATGCCTG ATGGCAGCTG GTTCTGCAAT GACTGCCGAG CTGGGAAGAA GCTCCACTTT
CAAGACATCA TTTGGGTCAA ACTTGGGAAC TACAGATGGT GGCCAGCAGA AGTTTGCCAT
CCCAAAAATG TTCCCCCAAA TATTCAGAAA ATGAAGCACG AGATTGGAGA ATTCCCTGTG
TTTTTCTTCG GGTCTAAAGA TTATTACTGG ACGCATCAGG CACGAGTGTT CCCATACATG
GAGGGGGACC GGGGCAGCCG CTACCAGGGG GTCAGAGGGA TTGGAAGAGT CTTCAAGAAC
GCATTGCAAG AAGCCGAAGC TCGTTTTAAT GAAATCAAAC TTCAGCGGGA AGCCCGAGAA
ACACAGGAGA GTGAGAGAAA GCCTCCACCA TACAAGCATA TCAAGGTGAA TAAACCTTAT
GGTAAAGTCC AGATCTATAC AGCTGACATT TCTGAAATCC CAAAATGCAA CTGTAAGCCC
ACGGATGAGA ACCCCTGTGG CTCTGATTCA GAGTGTCTAA ACAGGATGCT AATGTTTGAG
TGCCACCCGC AGGTGTGCCC TGCAGGGGAA TATTGCCAGA ACCAGTGTTT CACTAAGCGC
CAGTACCCGG AGACCAAGAT CATCAAGACC GATGGCAAAG GGTGGGGCCT GGTTGCCAAA
AGGGACATCA GAAAGGGAGA ATTTGTTAAT GAGTATGTTG GCGAACTGAT TGATGAAGAG
GAGTGTATGG CAAGAATCAA ATATGCACAT GAGAATGACA TCACTCACTT TTACATGCTC
ACCATAGACA AGGACCGCAT AATTGATGCT GGCCCCAAAG GGAATTACTC GCGGTTCATG
AACCATAGCT GCCAGCCCAA CTGTGAGACC CTGAAGTGGA CAGTGAATGG GGACACACGG
GTTGGCCTGT TTGCTGTGTG CGACATCCCT GCAGGTACAG AGCTGACTTT CAACTATAAC
CTCGATTGTT TGGGCAATGA AAAGACAGTC TGTCGGTGTG GAGCCTCCAA CTGTAGTGGG
TTCCTTGGAG ACAGACCAAA GACATCAACA TCCCTTTCTT CAGAGGAAAA GAGTAAAAAG
GCCAAGAAGA AAACCAGGAG GCGCAGAGCC AAGGGTGAAG GAAAGCGGCA GTCAGAGGAC
GAATGCTTCC GCTGTGGTGA TGGCGGACAA CTGGTGCTGT GTGACCGCAA GTTCTGCACC
AAGGCCTACC ACCTATCCTG CTTGGGCTTG GGCAAGCGGC CCTTTGGGAA GTGGGAATGT
CCTTGGCATC ACTGTGATGT GTGTGGCAAA CCTTCTACCT CATTTTGCCA CCTCTGCCCC
AACTCATTCT GTAAGGAACA CCAAGATGGG ACTGCTTTCC GCTCCACCCA GGATGGGCAA
TCCTACTGCT GTGAGCATGA CCTGAGGGCA GACTCTGCAA ATAATACCAA GACTGAGAAA
CCCTTTCTAG ACTCACTCAA GGCGAAGGGG AAGAGGAAGA AAAGGCGGTG CTGGCGAAGG
GTCACAGACG GCAAATAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeqXP_006251436.1
CDS624..4721
Misc Feature(1)1275..1634(+)
Misc Feature(2)1311..1439(+)
Misc Feature(3)2001..>2138(+)
Misc Feature(4)2001..2096(+)
Misc Feature(5)2259..2753(+)
Misc Feature(6)2628..2756(+)
Misc Feature(7)2628..2738(+)
Misc Feature(8)2631..2753(+)
Misc Feature(9)2769..2909(+)
Misc Feature(10)2769..2894(+)
Misc Feature(11)2772..2909(+)
Misc Feature(12)2910..3071(+)
Misc Feature(13)2910..3056(+)
Misc Feature(14)2913..3071(+)
Misc Feature(15)3120..3242(+)
Misc Feature(16)3120..3224(+)
Misc Feature(17)3123..3239(+)
Misc Feature(18)3255..3539(+)
Misc Feature(19)3285..3404(+)
Misc Feature(20)3657..3809(+)
Misc Feature(21)3810..4181(+)
Misc Feature(22)4344..4472(+)
Misc Feature(23)4344..4457(+)
Misc Feature(24)4347..4472(+)
Translation
Position Chain Variation Link

Target ORF information:

RefSeq Version XM_006251374
Organism Rattus norvegicus (Norway rat)
Definition PREDICTED: Rattus norvegicus Wolf-Hirschhorn syndrome candidate 1 (Whsc1), transcript variant X4, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_006251374

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
ATGGAATTTA GCATCAGAAA AAGTCCTCTT TCTGTTCAGA AAGTTGTAAA GTGCATGAAG 
ATGAAGCAGG CACCAGAAAT CCTTGGCAGT GCAAATGGAA AGACTCAGAA CTGTGAAGTG
AATCACGAAT GTTCTGTATT CCTCAGCAAA GCTCAGCTTT CTAACAGCCT ACAGGAGGGG
GTCATGCAGA AATTTAACGG GCATGATGCA CTCCCCTTTC TTCCAGCAGA GAAGTTGAAA
GATCTTACTT CTTGTGTGTT TAATGGAGAA CCTGGTGCTC ATGATACTAA GTTGTGTTTT
GAGACCCAGG AAGTAAAAGG AATTGGGACA CCACCCAATA CTACTCCTAT CAAAAATGGC
TCTCCAGAAA TTAAACTGAA AATCACCAAA ACATACATGA ATGGGAAACC TCTCTTTGAA
TCTTCAATTT GTGGTGATGG CGCTGCTGAT ATGTCTCAGT CAGAAGAAAA TGGACAAAAA
TCGGATAATA AGACTAGGAG GAACAGGAAG AGGAGCATAA AATATGACTC TTTGCTGGAG
CAGGGCCTTG TGGAAGCAGC TTTAGTGTCC AAGATCTCAA GTCCTGAAGA TAAAAAGATT
CCAGTTAAGA AGGAGTCCTG TCCAAATAGT GGCAGAGACA GAGACCTCTT GTTAAAATAC
AACGTTGGTG ATTTGGTGTG GTCCAAAGTG TCAGGTTACC CTTGGTGGCC TTGCATGGTT
TCTGCTGATC CACTCCTTCA CAATCATACC AAACTTAAAG GTCAGAAAAA AAGTGCACGC
CAGTATCATG TACAATTCTT TGGTGATGCC CCAGAAAGAG CTTGGATATT TGAGAAGAGC
CTTGTTGCTT TTGAAGGAGA AGAACAATTT GAAAAATTAT GCCAAGAAAG TGCCAAGCAG
GCACCCACGA AAGCTGAGAA AATCAAGTTG TTGAAACCTA TTTCAGGGAG ATTGAGAGCC
CAGTGGGAAA TGGGCATTGT CCAGGCTGAG GAAGCTGCTA GCATGTCAGT AGAGGAGCGG
AAAGCCAAGT TTACTTTCCT TTATGTGGGG GACCAACTGC GCCTCAACCC TCAAGTGGCT
AAGGAGGCTG GCATTGCTAC AGAACCTTTG GGAGAAATGG TGGACTCTTC AGTGGCCAAT
GAAGAAGCTG CTGTAGACCC TGGGACTATG AGAGAAGAGG ACATTCCCGT AAAGAGAAGG
CGAAGAGCCA AAAGGTCTAG TTCTGCTGAG AACCAGGAAG GAGACCCCGG CACAGAAAAG
AGTACACCTC CAAAGATGGC GGATGCTGAA CCTAAGAGAG GCGTAGGTTC TCCTGCCGGG
AGGAAAAGGT CCACAGGATC TGCCTCACGG AGCAGAAAGG GAGACTCAGC AGCCCAGTTC
TTAGTCTTTT GTCAAAAACA CAGGGATGAG GTCGTAGCTG AACACCCAGA TGCCTCAGAG
GAGGAGATTG AAGAATTGCT TGGGTCCCAA TGGAGCATGC TCAATGAAAA GCAGAAAGCA
CGATATAATA CAAAGTTTTC CCTAATGATC TCTGCCCAGT CTGAAGAAGA CTCTGGAAAT
ACCAGTGGGA AAAAAAGGAC CCACACAAAA AGGACAGATG ACCCTCCTGA GGATGTGGAT
GTAGAAGACG CACCCAGGAA AAGACTTAGG ACAGATAAGC ACAGTCTTCG GAAGAGAGAG
ACAATCACCG ACAAAACGGC CAGAACGAGC TCGTACAAGG CTATAGAGGC AGCCTCCTCA
CTCAAGAGCC AGGCAGCAAC GAAAAATTTG TCTGATGCTT GCAAACCACT GAAGAAGCGA
AATCGGGCTT CTGCAACAGC GTCTTCAGCA CTTGGGTTTA ACAAAAGTTC ATCTCCTTCT
GCATCCTTAA CTGAGAATGA GGTCTCAGAC AACCCAGGAG ATGAACCGTC AGAGTCTCCG
TATGAAAGTG CAGATGAAAC ACAGACTGAA GCGTCCGTCT CATCTAAGAA ATCTGAAAGA
GGAATGGCTG CCAAAAAGGA GTACGTGTGT CAGCTGTGTG AGAAGACAGG CAGTCTCTTA
CTGTGTGAAG GCCCCTGTTG TGGAGCATTC CACTTAGCCT GCCTTGGACT TTCCCAGAGA
CCAGAAGGAA GATTCACCTG CACTGAATGT GCCTCAGGGA TTCACTCATG CTTCGTATGT
AAAGAAAGCA AGATGGAGGT GAAACGCTGT ATGGTAAACC AATGTGGAAA GTTTTACCAT
GAAGCCTGTG TGAAAAAATA CCCTCTCACT GTGTTTGAGA GCCGAGGCTT TCGCTGTCCT
CTCCACAGCT GTATGAGCTG CCATGCCTCA AACCCTTCAA ATCCGCGGCC ATCAAAAGGT
AAAATGATGC GGTGCGTCCG ATGCCCTGTC GCCTATCATG GCGGGGATGC CTGCCTGGCA
GCGGGATGTT CCGTGATTGC TTCTAACAGC ATAATCTGCA CAGGCCACTT CACTGCCCGC
AAGGGGAAGC GGCACCACAC TCATGTCAAT GTGAGCTGGT GCTTCGTGTG CTCCAAAGGG
GGAAGCCTTC TGTGCTGCGA GGCCTGTCCG GCAGCCTTCC ACCCTGATTG TTTGAGCATC
GAGATGCCTG ATGGCAGCTG GTTCTGCAAT GACTGCCGAG CTGGGAAGAA GCTCCACTTT
CAAGACATCA TTTGGGTCAA ACTTGGGAAC TACAGATGGT GGCCAGCAGA AGTTTGCCAT
CCCAAAAATG TTCCCCCAAA TATTCAGAAA ATGAAGCACG AGATTGGAGA ATTCCCTGTG
TTTTTCTTCG GGTCTAAAGA TTATTACTGG ACGCATCAGG CACGAGTGTT CCCATACATG
GAGGGGGACC GGGGCAGCCG CTACCAGGGG GTCAGAGGGA TTGGAAGAGT CTTCAAGAAC
GCATTGCAAG AAGCCGAAGC TCGTTTTAAT GAAATCAAAC TTCAGCGGGA AGCCCGAGAA
ACACAGGAGA GTGAGAGAAA GCCTCCACCA TACAAGCATA TCAAGGTGAA TAAACCTTAT
GGTAAAGTCC AGATCTATAC AGCTGACATT TCTGAAATCC CAAAATGCAA CTGTAAGCCC
ACGGATGAGA ACCCCTGTGG CTCTGATTCA GAGTGTCTAA ACAGGATGCT AATGTTTGAG
TGCCACCCGC AGGTGTGCCC TGCAGGGGAA TATTGCCAGA ACCAGTGTTT CACTAAGCGC
CAGTACCCGG AGACCAAGAT CATCAAGACC GATGGCAAAG GGTGGGGCCT GGTTGCCAAA
AGGGACATCA GAAAGGGAGA ATTTGTTAAT GAGTATGTTG GCGAACTGAT TGATGAAGAG
GAGTGTATGG CAAGAATCAA ATATGCACAT GAGAATGACA TCACTCACTT TTACATGCTC
ACCATAGACA AGGACCGCAT AATTGATGCT GGCCCCAAAG GGAATTACTC GCGGTTCATG
AACCATAGCT GCCAGCCCAA CTGTGAGACC CTGAAGTGGA CAGTGAATGG GGACACACGG
GTTGGCCTGT TTGCTGTGTG CGACATCCCT GCAGGTACAG AGCTGACTTT CAACTATAAC
CTCGATTGTT TGGGCAATGA AAAGACAGTC TGTCGGTGTG GAGCCTCCAA CTGTAGTGGG
TTCCTTGGAG ACAGACCAAA GACATCAACA TCCCTTTCTT CAGAGGAAAA GAGTAAAAAG
GCCAAGAAGA AAACCAGGAG GCGCAGAGCC AAGGGTGAAG GAAAGCGGCA GTCAGAGGAC
GAATGCTTCC GCTGTGGTGA TGGCGGACAA CTGGTGCTGT GTGACCGCAA GTTCTGCACC
AAGGCCTACC ACCTATCCTG CTTGGGCTTG GGCAAGCGGC CCTTTGGGAA GTGGGAATGT
CCTTGGCATC ACTGTGATGT GTGTGGCAAA CCTTCTACCT CATTTTGCCA CCTCTGCCCC
AACTCATTCT GTAAGGAACA CCAAGATGGG ACTGCTTTCC GCTCCACCCA GGATGGGCAA
TCCTACTGCT GTGAGCATGA CCTGAGGGCA GACTCTGCAA ATAATACCAA GACTGAGAAA
CCCTTTCTAG ACTCACTCAA GGCGAAGGGG AAGAGGAAGA AAAGGCGGTG CTGGCGAAGG
GTCACAGACG GCAAATAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ORa36339
Accession Version XM_006251375.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 4098bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 07-AUG-2014
Organism Rattus norvegicus (Norway rat)
Product histone-lysine N-methyltransferase NSD2 isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_007905987.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced gi:564384615. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
ATGGAATTTA GCATCAGAAA AAGTCCTCTT TCTGTTCAGA AAGTTGTAAA GTGCATGAAG 
ATGAAGCAGG CACCAGAAAT CCTTGGCAGT GCAAATGGAA AGACTCAGAA CTGTGAAGTG
AATCACGAAT GTTCTGTATT CCTCAGCAAA GCTCAGCTTT CTAACAGCCT ACAGGAGGGG
GTCATGCAGA AATTTAACGG GCATGATGCA CTCCCCTTTC TTCCAGCAGA GAAGTTGAAA
GATCTTACTT CTTGTGTGTT TAATGGAGAA CCTGGTGCTC ATGATACTAA GTTGTGTTTT
GAGACCCAGG AAGTAAAAGG AATTGGGACA CCACCCAATA CTACTCCTAT CAAAAATGGC
TCTCCAGAAA TTAAACTGAA AATCACCAAA ACATACATGA ATGGGAAACC TCTCTTTGAA
TCTTCAATTT GTGGTGATGG CGCTGCTGAT ATGTCTCAGT CAGAAGAAAA TGGACAAAAA
TCGGATAATA AGACTAGGAG GAACAGGAAG AGGAGCATAA AATATGACTC TTTGCTGGAG
CAGGGCCTTG TGGAAGCAGC TTTAGTGTCC AAGATCTCAA GTCCTGAAGA TAAAAAGATT
CCAGTTAAGA AGGAGTCCTG TCCAAATAGT GGCAGAGACA GAGACCTCTT GTTAAAATAC
AACGTTGGTG ATTTGGTGTG GTCCAAAGTG TCAGGTTACC CTTGGTGGCC TTGCATGGTT
TCTGCTGATC CACTCCTTCA CAATCATACC AAACTTAAAG GTCAGAAAAA AAGTGCACGC
CAGTATCATG TACAATTCTT TGGTGATGCC CCAGAAAGAG CTTGGATATT TGAGAAGAGC
CTTGTTGCTT TTGAAGGAGA AGAACAATTT GAAAAATTAT GCCAAGAAAG TGCCAAGCAG
GCACCCACGA AAGCTGAGAA AATCAAGTTG TTGAAACCTA TTTCAGGGAG ATTGAGAGCC
CAGTGGGAAA TGGGCATTGT CCAGGCTGAG GAAGCTGCTA GCATGTCAGT AGAGGAGCGG
AAAGCCAAGT TTACTTTCCT TTATGTGGGG GACCAACTGC GCCTCAACCC TCAAGTGGCT
AAGGAGGCTG GCATTGCTAC AGAACCTTTG GGAGAAATGG TGGACTCTTC AGTGGCCAAT
GAAGAAGCTG CTGTAGACCC TGGGACTATG AGAGAAGAGG ACATTCCCGT AAAGAGAAGG
CGAAGAGCCA AAAGGTCTAG TTCTGCTGAG AACCAGGAAG GAGACCCCGG CACAGAAAAG
AGTACACCTC CAAAGATGGC GGATGCTGAA CCTAAGAGAG GCGTAGGTTC TCCTGCCGGG
AGGAAAAGGT CCACAGGATC TGCCTCACGG AGCAGAAAGG GAGACTCAGC AGCCCAGTTC
TTAGTCTTTT GTCAAAAACA CAGGGATGAG GTCGTAGCTG AACACCCAGA TGCCTCAGAG
GAGGAGATTG AAGAATTGCT TGGGTCCCAA TGGAGCATGC TCAATGAAAA GCAGAAAGCA
CGATATAATA CAAAGTTTTC CCTAATGATC TCTGCCCAGT CTGAAGAAGA CTCTGGAAAT
ACCAGTGGGA AAAAAAGGAC CCACACAAAA AGGACAGATG ACCCTCCTGA GGATGTGGAT
GTAGAAGACG CACCCAGGAA AAGACTTAGG ACAGATAAGC ACAGTCTTCG GAAGAGAGAG
ACAATCACCG ACAAAACGGC CAGAACGAGC TCGTACAAGG CTATAGAGGC AGCCTCCTCA
CTCAAGAGCC AGGCAGCAAC GAAAAATTTG TCTGATGCTT GCAAACCACT GAAGAAGCGA
AATCGGGCTT CTGCAACAGC GTCTTCAGCA CTTGGGTTTA ACAAAAGTTC ATCTCCTTCT
GCATCCTTAA CTGAGAATGA GGTCTCAGAC AACCCAGGAG ATGAACCGTC AGAGTCTCCG
TATGAAAGTG CAGATGAAAC ACAGACTGAA GCGTCCGTCT CATCTAAGAA ATCTGAAAGA
GGAATGGCTG CCAAAAAGGA GTACGTGTGT CAGCTGTGTG AGAAGACAGG CAGTCTCTTA
CTGTGTGAAG GCCCCTGTTG TGGAGCATTC CACTTAGCCT GCCTTGGACT TTCCCAGAGA
CCAGAAGGAA GATTCACCTG CACTGAATGT GCCTCAGGGA TTCACTCATG CTTCGTATGT
AAAGAAAGCA AGATGGAGGT GAAACGCTGT ATGGTAAACC AATGTGGAAA GTTTTACCAT
GAAGCCTGTG TGAAAAAATA CCCTCTCACT GTGTTTGAGA GCCGAGGCTT TCGCTGTCCT
CTCCACAGCT GTATGAGCTG CCATGCCTCA AACCCTTCAA ATCCGCGGCC ATCAAAAGGT
AAAATGATGC GGTGCGTCCG ATGCCCTGTC GCCTATCATG GCGGGGATGC CTGCCTGGCA
GCGGGATGTT CCGTGATTGC TTCTAACAGC ATAATCTGCA CAGGCCACTT CACTGCCCGC
AAGGGGAAGC GGCACCACAC TCATGTCAAT GTGAGCTGGT GCTTCGTGTG CTCCAAAGGG
GGAAGCCTTC TGTGCTGCGA GGCCTGTCCG GCAGCCTTCC ACCCTGATTG TTTGAGCATC
GAGATGCCTG ATGGCAGCTG GTTCTGCAAT GACTGCCGAG CTGGGAAGAA GCTCCACTTT
CAAGACATCA TTTGGGTCAA ACTTGGGAAC TACAGATGGT GGCCAGCAGA AGTTTGCCAT
CCCAAAAATG TTCCCCCAAA TATTCAGAAA ATGAAGCACG AGATTGGAGA ATTCCCTGTG
TTTTTCTTCG GGTCTAAAGA TTATTACTGG ACGCATCAGG CACGAGTGTT CCCATACATG
GAGGGGGACC GGGGCAGCCG CTACCAGGGG GTCAGAGGGA TTGGAAGAGT CTTCAAGAAC
GCATTGCAAG AAGCCGAAGC TCGTTTTAAT GAAATCAAAC TTCAGCGGGA AGCCCGAGAA
ACACAGGAGA GTGAGAGAAA GCCTCCACCA TACAAGCATA TCAAGGTGAA TAAACCTTAT
GGTAAAGTCC AGATCTATAC AGCTGACATT TCTGAAATCC CAAAATGCAA CTGTAAGCCC
ACGGATGAGA ACCCCTGTGG CTCTGATTCA GAGTGTCTAA ACAGGATGCT AATGTTTGAG
TGCCACCCGC AGGTGTGCCC TGCAGGGGAA TATTGCCAGA ACCAGTGTTT CACTAAGCGC
CAGTACCCGG AGACCAAGAT CATCAAGACC GATGGCAAAG GGTGGGGCCT GGTTGCCAAA
AGGGACATCA GAAAGGGAGA ATTTGTTAAT GAGTATGTTG GCGAACTGAT TGATGAAGAG
GAGTGTATGG CAAGAATCAA ATATGCACAT GAGAATGACA TCACTCACTT TTACATGCTC
ACCATAGACA AGGACCGCAT AATTGATGCT GGCCCCAAAG GGAATTACTC GCGGTTCATG
AACCATAGCT GCCAGCCCAA CTGTGAGACC CTGAAGTGGA CAGTGAATGG GGACACACGG
GTTGGCCTGT TTGCTGTGTG CGACATCCCT GCAGGTACAG AGCTGACTTT CAACTATAAC
CTCGATTGTT TGGGCAATGA AAAGACAGTC TGTCGGTGTG GAGCCTCCAA CTGTAGTGGG
TTCCTTGGAG ACAGACCAAA GACATCAACA TCCCTTTCTT CAGAGGAAAA GAGTAAAAAG
GCCAAGAAGA AAACCAGGAG GCGCAGAGCC AAGGGTGAAG GAAAGCGGCA GTCAGAGGAC
GAATGCTTCC GCTGTGGTGA TGGCGGACAA CTGGTGCTGT GTGACCGCAA GTTCTGCACC
AAGGCCTACC ACCTATCCTG CTTGGGCTTG GGCAAGCGGC CCTTTGGGAA GTGGGAATGT
CCTTGGCATC ACTGTGATGT GTGTGGCAAA CCTTCTACCT CATTTTGCCA CCTCTGCCCC
AACTCATTCT GTAAGGAACA CCAAGATGGG ACTGCTTTCC GCTCCACCCA GGATGGGCAA
TCCTACTGCT GTGAGCATGA CCTGAGGGCA GACTCTGCAA ATAATACCAA GACTGAGAAA
CCCTTTCTAG ACTCACTCAA GGCGAAGGGG AAGAGGAAGA AAAGGCGGTG CTGGCGAAGG
GTCACAGACG GCAAATAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeqXP_006251437.1
CDS823..4920
Misc Feature(1)1474..1833(+)
Misc Feature(2)1510..1638(+)
Misc Feature(3)2200..>2337(+)
Misc Feature(4)2200..2295(+)
Misc Feature(5)2458..2952(+)
Misc Feature(6)2827..2955(+)
Misc Feature(7)2827..2937(+)
Misc Feature(8)2830..2952(+)
Misc Feature(9)2968..3108(+)
Misc Feature(10)2968..3093(+)
Misc Feature(11)2971..3108(+)
Misc Feature(12)3109..3270(+)
Misc Feature(13)3109..3255(+)
Misc Feature(14)3112..3270(+)
Misc Feature(15)3319..3441(+)
Misc Feature(16)3319..3423(+)
Misc Feature(17)3322..3438(+)
Misc Feature(18)3454..3738(+)
Misc Feature(19)3484..3603(+)
Misc Feature(20)3856..4008(+)
Misc Feature(21)4009..4380(+)
Misc Feature(22)4543..4671(+)
Misc Feature(23)4543..4656(+)
Misc Feature(24)4546..4671(+)
Translation
Position Chain Variation Link

Target ORF information:

RefSeq Version XM_006251375
Organism Rattus norvegicus (Norway rat)
Definition PREDICTED: Rattus norvegicus Wolf-Hirschhorn syndrome candidate 1 (Whsc1), transcript variant X5, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_006251375

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
ATGGAATTTA GCATCAGAAA AAGTCCTCTT TCTGTTCAGA AAGTTGTAAA GTGCATGAAG 
ATGAAGCAGG CACCAGAAAT CCTTGGCAGT GCAAATGGAA AGACTCAGAA CTGTGAAGTG
AATCACGAAT GTTCTGTATT CCTCAGCAAA GCTCAGCTTT CTAACAGCCT ACAGGAGGGG
GTCATGCAGA AATTTAACGG GCATGATGCA CTCCCCTTTC TTCCAGCAGA GAAGTTGAAA
GATCTTACTT CTTGTGTGTT TAATGGAGAA CCTGGTGCTC ATGATACTAA GTTGTGTTTT
GAGACCCAGG AAGTAAAAGG AATTGGGACA CCACCCAATA CTACTCCTAT CAAAAATGGC
TCTCCAGAAA TTAAACTGAA AATCACCAAA ACATACATGA ATGGGAAACC TCTCTTTGAA
TCTTCAATTT GTGGTGATGG CGCTGCTGAT ATGTCTCAGT CAGAAGAAAA TGGACAAAAA
TCGGATAATA AGACTAGGAG GAACAGGAAG AGGAGCATAA AATATGACTC TTTGCTGGAG
CAGGGCCTTG TGGAAGCAGC TTTAGTGTCC AAGATCTCAA GTCCTGAAGA TAAAAAGATT
CCAGTTAAGA AGGAGTCCTG TCCAAATAGT GGCAGAGACA GAGACCTCTT GTTAAAATAC
AACGTTGGTG ATTTGGTGTG GTCCAAAGTG TCAGGTTACC CTTGGTGGCC TTGCATGGTT
TCTGCTGATC CACTCCTTCA CAATCATACC AAACTTAAAG GTCAGAAAAA AAGTGCACGC
CAGTATCATG TACAATTCTT TGGTGATGCC CCAGAAAGAG CTTGGATATT TGAGAAGAGC
CTTGTTGCTT TTGAAGGAGA AGAACAATTT GAAAAATTAT GCCAAGAAAG TGCCAAGCAG
GCACCCACGA AAGCTGAGAA AATCAAGTTG TTGAAACCTA TTTCAGGGAG ATTGAGAGCC
CAGTGGGAAA TGGGCATTGT CCAGGCTGAG GAAGCTGCTA GCATGTCAGT AGAGGAGCGG
AAAGCCAAGT TTACTTTCCT TTATGTGGGG GACCAACTGC GCCTCAACCC TCAAGTGGCT
AAGGAGGCTG GCATTGCTAC AGAACCTTTG GGAGAAATGG TGGACTCTTC AGTGGCCAAT
GAAGAAGCTG CTGTAGACCC TGGGACTATG AGAGAAGAGG ACATTCCCGT AAAGAGAAGG
CGAAGAGCCA AAAGGTCTAG TTCTGCTGAG AACCAGGAAG GAGACCCCGG CACAGAAAAG
AGTACACCTC CAAAGATGGC GGATGCTGAA CCTAAGAGAG GCGTAGGTTC TCCTGCCGGG
AGGAAAAGGT CCACAGGATC TGCCTCACGG AGCAGAAAGG GAGACTCAGC AGCCCAGTTC
TTAGTCTTTT GTCAAAAACA CAGGGATGAG GTCGTAGCTG AACACCCAGA TGCCTCAGAG
GAGGAGATTG AAGAATTGCT TGGGTCCCAA TGGAGCATGC TCAATGAAAA GCAGAAAGCA
CGATATAATA CAAAGTTTTC CCTAATGATC TCTGCCCAGT CTGAAGAAGA CTCTGGAAAT
ACCAGTGGGA AAAAAAGGAC CCACACAAAA AGGACAGATG ACCCTCCTGA GGATGTGGAT
GTAGAAGACG CACCCAGGAA AAGACTTAGG ACAGATAAGC ACAGTCTTCG GAAGAGAGAG
ACAATCACCG ACAAAACGGC CAGAACGAGC TCGTACAAGG CTATAGAGGC AGCCTCCTCA
CTCAAGAGCC AGGCAGCAAC GAAAAATTTG TCTGATGCTT GCAAACCACT GAAGAAGCGA
AATCGGGCTT CTGCAACAGC GTCTTCAGCA CTTGGGTTTA ACAAAAGTTC ATCTCCTTCT
GCATCCTTAA CTGAGAATGA GGTCTCAGAC AACCCAGGAG ATGAACCGTC AGAGTCTCCG
TATGAAAGTG CAGATGAAAC ACAGACTGAA GCGTCCGTCT CATCTAAGAA ATCTGAAAGA
GGAATGGCTG CCAAAAAGGA GTACGTGTGT CAGCTGTGTG AGAAGACAGG CAGTCTCTTA
CTGTGTGAAG GCCCCTGTTG TGGAGCATTC CACTTAGCCT GCCTTGGACT TTCCCAGAGA
CCAGAAGGAA GATTCACCTG CACTGAATGT GCCTCAGGGA TTCACTCATG CTTCGTATGT
AAAGAAAGCA AGATGGAGGT GAAACGCTGT ATGGTAAACC AATGTGGAAA GTTTTACCAT
GAAGCCTGTG TGAAAAAATA CCCTCTCACT GTGTTTGAGA GCCGAGGCTT TCGCTGTCCT
CTCCACAGCT GTATGAGCTG CCATGCCTCA AACCCTTCAA ATCCGCGGCC ATCAAAAGGT
AAAATGATGC GGTGCGTCCG ATGCCCTGTC GCCTATCATG GCGGGGATGC CTGCCTGGCA
GCGGGATGTT CCGTGATTGC TTCTAACAGC ATAATCTGCA CAGGCCACTT CACTGCCCGC
AAGGGGAAGC GGCACCACAC TCATGTCAAT GTGAGCTGGT GCTTCGTGTG CTCCAAAGGG
GGAAGCCTTC TGTGCTGCGA GGCCTGTCCG GCAGCCTTCC ACCCTGATTG TTTGAGCATC
GAGATGCCTG ATGGCAGCTG GTTCTGCAAT GACTGCCGAG CTGGGAAGAA GCTCCACTTT
CAAGACATCA TTTGGGTCAA ACTTGGGAAC TACAGATGGT GGCCAGCAGA AGTTTGCCAT
CCCAAAAATG TTCCCCCAAA TATTCAGAAA ATGAAGCACG AGATTGGAGA ATTCCCTGTG
TTTTTCTTCG GGTCTAAAGA TTATTACTGG ACGCATCAGG CACGAGTGTT CCCATACATG
GAGGGGGACC GGGGCAGCCG CTACCAGGGG GTCAGAGGGA TTGGAAGAGT CTTCAAGAAC
GCATTGCAAG AAGCCGAAGC TCGTTTTAAT GAAATCAAAC TTCAGCGGGA AGCCCGAGAA
ACACAGGAGA GTGAGAGAAA GCCTCCACCA TACAAGCATA TCAAGGTGAA TAAACCTTAT
GGTAAAGTCC AGATCTATAC AGCTGACATT TCTGAAATCC CAAAATGCAA CTGTAAGCCC
ACGGATGAGA ACCCCTGTGG CTCTGATTCA GAGTGTCTAA ACAGGATGCT AATGTTTGAG
TGCCACCCGC AGGTGTGCCC TGCAGGGGAA TATTGCCAGA ACCAGTGTTT CACTAAGCGC
CAGTACCCGG AGACCAAGAT CATCAAGACC GATGGCAAAG GGTGGGGCCT GGTTGCCAAA
AGGGACATCA GAAAGGGAGA ATTTGTTAAT GAGTATGTTG GCGAACTGAT TGATGAAGAG
GAGTGTATGG CAAGAATCAA ATATGCACAT GAGAATGACA TCACTCACTT TTACATGCTC
ACCATAGACA AGGACCGCAT AATTGATGCT GGCCCCAAAG GGAATTACTC GCGGTTCATG
AACCATAGCT GCCAGCCCAA CTGTGAGACC CTGAAGTGGA CAGTGAATGG GGACACACGG
GTTGGCCTGT TTGCTGTGTG CGACATCCCT GCAGGTACAG AGCTGACTTT CAACTATAAC
CTCGATTGTT TGGGCAATGA AAAGACAGTC TGTCGGTGTG GAGCCTCCAA CTGTAGTGGG
TTCCTTGGAG ACAGACCAAA GACATCAACA TCCCTTTCTT CAGAGGAAAA GAGTAAAAAG
GCCAAGAAGA AAACCAGGAG GCGCAGAGCC AAGGGTGAAG GAAAGCGGCA GTCAGAGGAC
GAATGCTTCC GCTGTGGTGA TGGCGGACAA CTGGTGCTGT GTGACCGCAA GTTCTGCACC
AAGGCCTACC ACCTATCCTG CTTGGGCTTG GGCAAGCGGC CCTTTGGGAA GTGGGAATGT
CCTTGGCATC ACTGTGATGT GTGTGGCAAA CCTTCTACCT CATTTTGCCA CCTCTGCCCC
AACTCATTCT GTAAGGAACA CCAAGATGGG ACTGCTTTCC GCTCCACCCA GGATGGGCAA
TCCTACTGCT GTGAGCATGA CCTGAGGGCA GACTCTGCAA ATAATACCAA GACTGAGAAA
CCCTTTCTAG ACTCACTCAA GGCGAAGGGG AAGAGGAAGA AAAGGCGGTG CTGGCGAAGG
GTCACAGACG GCAAATAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ORa36339
Accession Version XM_006251377.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 4098bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 07-AUG-2014
Organism Rattus norvegicus (Norway rat)
Product histone-lysine N-methyltransferase NSD2 isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_007905987.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced gi:564384619. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
ATGGAATTTA GCATCAGAAA AAGTCCTCTT TCTGTTCAGA AAGTTGTAAA GTGCATGAAG 
ATGAAGCAGG CACCAGAAAT CCTTGGCAGT GCAAATGGAA AGACTCAGAA CTGTGAAGTG
AATCACGAAT GTTCTGTATT CCTCAGCAAA GCTCAGCTTT CTAACAGCCT ACAGGAGGGG
GTCATGCAGA AATTTAACGG GCATGATGCA CTCCCCTTTC TTCCAGCAGA GAAGTTGAAA
GATCTTACTT CTTGTGTGTT TAATGGAGAA CCTGGTGCTC ATGATACTAA GTTGTGTTTT
GAGACCCAGG AAGTAAAAGG AATTGGGACA CCACCCAATA CTACTCCTAT CAAAAATGGC
TCTCCAGAAA TTAAACTGAA AATCACCAAA ACATACATGA ATGGGAAACC TCTCTTTGAA
TCTTCAATTT GTGGTGATGG CGCTGCTGAT ATGTCTCAGT CAGAAGAAAA TGGACAAAAA
TCGGATAATA AGACTAGGAG GAACAGGAAG AGGAGCATAA AATATGACTC TTTGCTGGAG
CAGGGCCTTG TGGAAGCAGC TTTAGTGTCC AAGATCTCAA GTCCTGAAGA TAAAAAGATT
CCAGTTAAGA AGGAGTCCTG TCCAAATAGT GGCAGAGACA GAGACCTCTT GTTAAAATAC
AACGTTGGTG ATTTGGTGTG GTCCAAAGTG TCAGGTTACC CTTGGTGGCC TTGCATGGTT
TCTGCTGATC CACTCCTTCA CAATCATACC AAACTTAAAG GTCAGAAAAA AAGTGCACGC
CAGTATCATG TACAATTCTT TGGTGATGCC CCAGAAAGAG CTTGGATATT TGAGAAGAGC
CTTGTTGCTT TTGAAGGAGA AGAACAATTT GAAAAATTAT GCCAAGAAAG TGCCAAGCAG
GCACCCACGA AAGCTGAGAA AATCAAGTTG TTGAAACCTA TTTCAGGGAG ATTGAGAGCC
CAGTGGGAAA TGGGCATTGT CCAGGCTGAG GAAGCTGCTA GCATGTCAGT AGAGGAGCGG
AAAGCCAAGT TTACTTTCCT TTATGTGGGG GACCAACTGC GCCTCAACCC TCAAGTGGCT
AAGGAGGCTG GCATTGCTAC AGAACCTTTG GGAGAAATGG TGGACTCTTC AGTGGCCAAT
GAAGAAGCTG CTGTAGACCC TGGGACTATG AGAGAAGAGG ACATTCCCGT AAAGAGAAGG
CGAAGAGCCA AAAGGTCTAG TTCTGCTGAG AACCAGGAAG GAGACCCCGG CACAGAAAAG
AGTACACCTC CAAAGATGGC GGATGCTGAA CCTAAGAGAG GCGTAGGTTC TCCTGCCGGG
AGGAAAAGGT CCACAGGATC TGCCTCACGG AGCAGAAAGG GAGACTCAGC AGCCCAGTTC
TTAGTCTTTT GTCAAAAACA CAGGGATGAG GTCGTAGCTG AACACCCAGA TGCCTCAGAG
GAGGAGATTG AAGAATTGCT TGGGTCCCAA TGGAGCATGC TCAATGAAAA GCAGAAAGCA
CGATATAATA CAAAGTTTTC CCTAATGATC TCTGCCCAGT CTGAAGAAGA CTCTGGAAAT
ACCAGTGGGA AAAAAAGGAC CCACACAAAA AGGACAGATG ACCCTCCTGA GGATGTGGAT
GTAGAAGACG CACCCAGGAA AAGACTTAGG ACAGATAAGC ACAGTCTTCG GAAGAGAGAG
ACAATCACCG ACAAAACGGC CAGAACGAGC TCGTACAAGG CTATAGAGGC AGCCTCCTCA
CTCAAGAGCC AGGCAGCAAC GAAAAATTTG TCTGATGCTT GCAAACCACT GAAGAAGCGA
AATCGGGCTT CTGCAACAGC GTCTTCAGCA CTTGGGTTTA ACAAAAGTTC ATCTCCTTCT
GCATCCTTAA CTGAGAATGA GGTCTCAGAC AACCCAGGAG ATGAACCGTC AGAGTCTCCG
TATGAAAGTG CAGATGAAAC ACAGACTGAA GCGTCCGTCT CATCTAAGAA ATCTGAAAGA
GGAATGGCTG CCAAAAAGGA GTACGTGTGT CAGCTGTGTG AGAAGACAGG CAGTCTCTTA
CTGTGTGAAG GCCCCTGTTG TGGAGCATTC CACTTAGCCT GCCTTGGACT TTCCCAGAGA
CCAGAAGGAA GATTCACCTG CACTGAATGT GCCTCAGGGA TTCACTCATG CTTCGTATGT
AAAGAAAGCA AGATGGAGGT GAAACGCTGT ATGGTAAACC AATGTGGAAA GTTTTACCAT
GAAGCCTGTG TGAAAAAATA CCCTCTCACT GTGTTTGAGA GCCGAGGCTT TCGCTGTCCT
CTCCACAGCT GTATGAGCTG CCATGCCTCA AACCCTTCAA ATCCGCGGCC ATCAAAAGGT
AAAATGATGC GGTGCGTCCG ATGCCCTGTC GCCTATCATG GCGGGGATGC CTGCCTGGCA
GCGGGATGTT CCGTGATTGC TTCTAACAGC ATAATCTGCA CAGGCCACTT CACTGCCCGC
AAGGGGAAGC GGCACCACAC TCATGTCAAT GTGAGCTGGT GCTTCGTGTG CTCCAAAGGG
GGAAGCCTTC TGTGCTGCGA GGCCTGTCCG GCAGCCTTCC ACCCTGATTG TTTGAGCATC
GAGATGCCTG ATGGCAGCTG GTTCTGCAAT GACTGCCGAG CTGGGAAGAA GCTCCACTTT
CAAGACATCA TTTGGGTCAA ACTTGGGAAC TACAGATGGT GGCCAGCAGA AGTTTGCCAT
CCCAAAAATG TTCCCCCAAA TATTCAGAAA ATGAAGCACG AGATTGGAGA ATTCCCTGTG
TTTTTCTTCG GGTCTAAAGA TTATTACTGG ACGCATCAGG CACGAGTGTT CCCATACATG
GAGGGGGACC GGGGCAGCCG CTACCAGGGG GTCAGAGGGA TTGGAAGAGT CTTCAAGAAC
GCATTGCAAG AAGCCGAAGC TCGTTTTAAT GAAATCAAAC TTCAGCGGGA AGCCCGAGAA
ACACAGGAGA GTGAGAGAAA GCCTCCACCA TACAAGCATA TCAAGGTGAA TAAACCTTAT
GGTAAAGTCC AGATCTATAC AGCTGACATT TCTGAAATCC CAAAATGCAA CTGTAAGCCC
ACGGATGAGA ACCCCTGTGG CTCTGATTCA GAGTGTCTAA ACAGGATGCT AATGTTTGAG
TGCCACCCGC AGGTGTGCCC TGCAGGGGAA TATTGCCAGA ACCAGTGTTT CACTAAGCGC
CAGTACCCGG AGACCAAGAT CATCAAGACC GATGGCAAAG GGTGGGGCCT GGTTGCCAAA
AGGGACATCA GAAAGGGAGA ATTTGTTAAT GAGTATGTTG GCGAACTGAT TGATGAAGAG
GAGTGTATGG CAAGAATCAA ATATGCACAT GAGAATGACA TCACTCACTT TTACATGCTC
ACCATAGACA AGGACCGCAT AATTGATGCT GGCCCCAAAG GGAATTACTC GCGGTTCATG
AACCATAGCT GCCAGCCCAA CTGTGAGACC CTGAAGTGGA CAGTGAATGG GGACACACGG
GTTGGCCTGT TTGCTGTGTG CGACATCCCT GCAGGTACAG AGCTGACTTT CAACTATAAC
CTCGATTGTT TGGGCAATGA AAAGACAGTC TGTCGGTGTG GAGCCTCCAA CTGTAGTGGG
TTCCTTGGAG ACAGACCAAA GACATCAACA TCCCTTTCTT CAGAGGAAAA GAGTAAAAAG
GCCAAGAAGA AAACCAGGAG GCGCAGAGCC AAGGGTGAAG GAAAGCGGCA GTCAGAGGAC
GAATGCTTCC GCTGTGGTGA TGGCGGACAA CTGGTGCTGT GTGACCGCAA GTTCTGCACC
AAGGCCTACC ACCTATCCTG CTTGGGCTTG GGCAAGCGGC CCTTTGGGAA GTGGGAATGT
CCTTGGCATC ACTGTGATGT GTGTGGCAAA CCTTCTACCT CATTTTGCCA CCTCTGCCCC
AACTCATTCT GTAAGGAACA CCAAGATGGG ACTGCTTTCC GCTCCACCCA GGATGGGCAA
TCCTACTGCT GTGAGCATGA CCTGAGGGCA GACTCTGCAA ATAATACCAA GACTGAGAAA
CCCTTTCTAG ACTCACTCAA GGCGAAGGGG AAGAGGAAGA AAAGGCGGTG CTGGCGAAGG
GTCACAGACG GCAAATAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeqXP_006251439.1
CDS778..4875
Misc Feature(1)1429..1788(+)
Misc Feature(2)1465..1593(+)
Misc Feature(3)2155..>2292(+)
Misc Feature(4)2155..2250(+)
Misc Feature(5)2413..2907(+)
Misc Feature(6)2782..2910(+)
Misc Feature(7)2782..2892(+)
Misc Feature(8)2785..2907(+)
Misc Feature(9)2923..3063(+)
Misc Feature(10)2923..3048(+)
Misc Feature(11)2926..3063(+)
Misc Feature(12)3064..3225(+)
Misc Feature(13)3064..3210(+)
Misc Feature(14)3067..3225(+)
Misc Feature(15)3274..3396(+)
Misc Feature(16)3274..3378(+)
Misc Feature(17)3277..3393(+)
Misc Feature(18)3409..3693(+)
Misc Feature(19)3439..3558(+)
Misc Feature(20)3811..3963(+)
Misc Feature(21)3964..4335(+)
Misc Feature(22)4498..4626(+)
Misc Feature(23)4498..4611(+)
Misc Feature(24)4501..4626(+)
Translation
Position Chain Variation Link

Target ORF information:

RefSeq Version XM_006251377
Organism Rattus norvegicus (Norway rat)
Definition PREDICTED: Rattus norvegicus Wolf-Hirschhorn syndrome candidate 1 (Whsc1), transcript variant X6, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_006251377

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
ATGGAATTTA GCATCAGAAA AAGTCCTCTT TCTGTTCAGA AAGTTGTAAA GTGCATGAAG 
ATGAAGCAGG CACCAGAAAT CCTTGGCAGT GCAAATGGAA AGACTCAGAA CTGTGAAGTG
AATCACGAAT GTTCTGTATT CCTCAGCAAA GCTCAGCTTT CTAACAGCCT ACAGGAGGGG
GTCATGCAGA AATTTAACGG GCATGATGCA CTCCCCTTTC TTCCAGCAGA GAAGTTGAAA
GATCTTACTT CTTGTGTGTT TAATGGAGAA CCTGGTGCTC ATGATACTAA GTTGTGTTTT
GAGACCCAGG AAGTAAAAGG AATTGGGACA CCACCCAATA CTACTCCTAT CAAAAATGGC
TCTCCAGAAA TTAAACTGAA AATCACCAAA ACATACATGA ATGGGAAACC TCTCTTTGAA
TCTTCAATTT GTGGTGATGG CGCTGCTGAT ATGTCTCAGT CAGAAGAAAA TGGACAAAAA
TCGGATAATA AGACTAGGAG GAACAGGAAG AGGAGCATAA AATATGACTC TTTGCTGGAG
CAGGGCCTTG TGGAAGCAGC TTTAGTGTCC AAGATCTCAA GTCCTGAAGA TAAAAAGATT
CCAGTTAAGA AGGAGTCCTG TCCAAATAGT GGCAGAGACA GAGACCTCTT GTTAAAATAC
AACGTTGGTG ATTTGGTGTG GTCCAAAGTG TCAGGTTACC CTTGGTGGCC TTGCATGGTT
TCTGCTGATC CACTCCTTCA CAATCATACC AAACTTAAAG GTCAGAAAAA AAGTGCACGC
CAGTATCATG TACAATTCTT TGGTGATGCC CCAGAAAGAG CTTGGATATT TGAGAAGAGC
CTTGTTGCTT TTGAAGGAGA AGAACAATTT GAAAAATTAT GCCAAGAAAG TGCCAAGCAG
GCACCCACGA AAGCTGAGAA AATCAAGTTG TTGAAACCTA TTTCAGGGAG ATTGAGAGCC
CAGTGGGAAA TGGGCATTGT CCAGGCTGAG GAAGCTGCTA GCATGTCAGT AGAGGAGCGG
AAAGCCAAGT TTACTTTCCT TTATGTGGGG GACCAACTGC GCCTCAACCC TCAAGTGGCT
AAGGAGGCTG GCATTGCTAC AGAACCTTTG GGAGAAATGG TGGACTCTTC AGTGGCCAAT
GAAGAAGCTG CTGTAGACCC TGGGACTATG AGAGAAGAGG ACATTCCCGT AAAGAGAAGG
CGAAGAGCCA AAAGGTCTAG TTCTGCTGAG AACCAGGAAG GAGACCCCGG CACAGAAAAG
AGTACACCTC CAAAGATGGC GGATGCTGAA CCTAAGAGAG GCGTAGGTTC TCCTGCCGGG
AGGAAAAGGT CCACAGGATC TGCCTCACGG AGCAGAAAGG GAGACTCAGC AGCCCAGTTC
TTAGTCTTTT GTCAAAAACA CAGGGATGAG GTCGTAGCTG AACACCCAGA TGCCTCAGAG
GAGGAGATTG AAGAATTGCT TGGGTCCCAA TGGAGCATGC TCAATGAAAA GCAGAAAGCA
CGATATAATA CAAAGTTTTC CCTAATGATC TCTGCCCAGT CTGAAGAAGA CTCTGGAAAT
ACCAGTGGGA AAAAAAGGAC CCACACAAAA AGGACAGATG ACCCTCCTGA GGATGTGGAT
GTAGAAGACG CACCCAGGAA AAGACTTAGG ACAGATAAGC ACAGTCTTCG GAAGAGAGAG
ACAATCACCG ACAAAACGGC CAGAACGAGC TCGTACAAGG CTATAGAGGC AGCCTCCTCA
CTCAAGAGCC AGGCAGCAAC GAAAAATTTG TCTGATGCTT GCAAACCACT GAAGAAGCGA
AATCGGGCTT CTGCAACAGC GTCTTCAGCA CTTGGGTTTA ACAAAAGTTC ATCTCCTTCT
GCATCCTTAA CTGAGAATGA GGTCTCAGAC AACCCAGGAG ATGAACCGTC AGAGTCTCCG
TATGAAAGTG CAGATGAAAC ACAGACTGAA GCGTCCGTCT CATCTAAGAA ATCTGAAAGA
GGAATGGCTG CCAAAAAGGA GTACGTGTGT CAGCTGTGTG AGAAGACAGG CAGTCTCTTA
CTGTGTGAAG GCCCCTGTTG TGGAGCATTC CACTTAGCCT GCCTTGGACT TTCCCAGAGA
CCAGAAGGAA GATTCACCTG CACTGAATGT GCCTCAGGGA TTCACTCATG CTTCGTATGT
AAAGAAAGCA AGATGGAGGT GAAACGCTGT ATGGTAAACC AATGTGGAAA GTTTTACCAT
GAAGCCTGTG TGAAAAAATA CCCTCTCACT GTGTTTGAGA GCCGAGGCTT TCGCTGTCCT
CTCCACAGCT GTATGAGCTG CCATGCCTCA AACCCTTCAA ATCCGCGGCC ATCAAAAGGT
AAAATGATGC GGTGCGTCCG ATGCCCTGTC GCCTATCATG GCGGGGATGC CTGCCTGGCA
GCGGGATGTT CCGTGATTGC TTCTAACAGC ATAATCTGCA CAGGCCACTT CACTGCCCGC
AAGGGGAAGC GGCACCACAC TCATGTCAAT GTGAGCTGGT GCTTCGTGTG CTCCAAAGGG
GGAAGCCTTC TGTGCTGCGA GGCCTGTCCG GCAGCCTTCC ACCCTGATTG TTTGAGCATC
GAGATGCCTG ATGGCAGCTG GTTCTGCAAT GACTGCCGAG CTGGGAAGAA GCTCCACTTT
CAAGACATCA TTTGGGTCAA ACTTGGGAAC TACAGATGGT GGCCAGCAGA AGTTTGCCAT
CCCAAAAATG TTCCCCCAAA TATTCAGAAA ATGAAGCACG AGATTGGAGA ATTCCCTGTG
TTTTTCTTCG GGTCTAAAGA TTATTACTGG ACGCATCAGG CACGAGTGTT CCCATACATG
GAGGGGGACC GGGGCAGCCG CTACCAGGGG GTCAGAGGGA TTGGAAGAGT CTTCAAGAAC
GCATTGCAAG AAGCCGAAGC TCGTTTTAAT GAAATCAAAC TTCAGCGGGA AGCCCGAGAA
ACACAGGAGA GTGAGAGAAA GCCTCCACCA TACAAGCATA TCAAGGTGAA TAAACCTTAT
GGTAAAGTCC AGATCTATAC AGCTGACATT TCTGAAATCC CAAAATGCAA CTGTAAGCCC
ACGGATGAGA ACCCCTGTGG CTCTGATTCA GAGTGTCTAA ACAGGATGCT AATGTTTGAG
TGCCACCCGC AGGTGTGCCC TGCAGGGGAA TATTGCCAGA ACCAGTGTTT CACTAAGCGC
CAGTACCCGG AGACCAAGAT CATCAAGACC GATGGCAAAG GGTGGGGCCT GGTTGCCAAA
AGGGACATCA GAAAGGGAGA ATTTGTTAAT GAGTATGTTG GCGAACTGAT TGATGAAGAG
GAGTGTATGG CAAGAATCAA ATATGCACAT GAGAATGACA TCACTCACTT TTACATGCTC
ACCATAGACA AGGACCGCAT AATTGATGCT GGCCCCAAAG GGAATTACTC GCGGTTCATG
AACCATAGCT GCCAGCCCAA CTGTGAGACC CTGAAGTGGA CAGTGAATGG GGACACACGG
GTTGGCCTGT TTGCTGTGTG CGACATCCCT GCAGGTACAG AGCTGACTTT CAACTATAAC
CTCGATTGTT TGGGCAATGA AAAGACAGTC TGTCGGTGTG GAGCCTCCAA CTGTAGTGGG
TTCCTTGGAG ACAGACCAAA GACATCAACA TCCCTTTCTT CAGAGGAAAA GAGTAAAAAG
GCCAAGAAGA AAACCAGGAG GCGCAGAGCC AAGGGTGAAG GAAAGCGGCA GTCAGAGGAC
GAATGCTTCC GCTGTGGTGA TGGCGGACAA CTGGTGCTGT GTGACCGCAA GTTCTGCACC
AAGGCCTACC ACCTATCCTG CTTGGGCTTG GGCAAGCGGC CCTTTGGGAA GTGGGAATGT
CCTTGGCATC ACTGTGATGT GTGTGGCAAA CCTTCTACCT CATTTTGCCA CCTCTGCCCC
AACTCATTCT GTAAGGAACA CCAAGATGGG ACTGCTTTCC GCTCCACCCA GGATGGGCAA
TCCTACTGCT GTGAGCATGA CCTGAGGGCA GACTCTGCAA ATAATACCAA GACTGAGAAA
CCCTTTCTAG ACTCACTCAA GGCGAAGGGG AAGAGGAAGA AAAGGCGGTG CTGGCGAAGG
GTCACAGACG GCAAATAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ORa36339
Accession Version XM_008770363.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 4098bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 07-AUG-2014
Organism Rattus norvegicus (Norway rat)
Product histone-lysine N-methyltransferase NSD2 isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_007905987.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
ATGGAATTTA GCATCAGAAA AAGTCCTCTT TCTGTTCAGA AAGTTGTAAA GTGCATGAAG 
ATGAAGCAGG CACCAGAAAT CCTTGGCAGT GCAAATGGAA AGACTCAGAA CTGTGAAGTG
AATCACGAAT GTTCTGTATT CCTCAGCAAA GCTCAGCTTT CTAACAGCCT ACAGGAGGGG
GTCATGCAGA AATTTAACGG GCATGATGCA CTCCCCTTTC TTCCAGCAGA GAAGTTGAAA
GATCTTACTT CTTGTGTGTT TAATGGAGAA CCTGGTGCTC ATGATACTAA GTTGTGTTTT
GAGACCCAGG AAGTAAAAGG AATTGGGACA CCACCCAATA CTACTCCTAT CAAAAATGGC
TCTCCAGAAA TTAAACTGAA AATCACCAAA ACATACATGA ATGGGAAACC TCTCTTTGAA
TCTTCAATTT GTGGTGATGG CGCTGCTGAT ATGTCTCAGT CAGAAGAAAA TGGACAAAAA
TCGGATAATA AGACTAGGAG GAACAGGAAG AGGAGCATAA AATATGACTC TTTGCTGGAG
CAGGGCCTTG TGGAAGCAGC TTTAGTGTCC AAGATCTCAA GTCCTGAAGA TAAAAAGATT
CCAGTTAAGA AGGAGTCCTG TCCAAATAGT GGCAGAGACA GAGACCTCTT GTTAAAATAC
AACGTTGGTG ATTTGGTGTG GTCCAAAGTG TCAGGTTACC CTTGGTGGCC TTGCATGGTT
TCTGCTGATC CACTCCTTCA CAATCATACC AAACTTAAAG GTCAGAAAAA AAGTGCACGC
CAGTATCATG TACAATTCTT TGGTGATGCC CCAGAAAGAG CTTGGATATT TGAGAAGAGC
CTTGTTGCTT TTGAAGGAGA AGAACAATTT GAAAAATTAT GCCAAGAAAG TGCCAAGCAG
GCACCCACGA AAGCTGAGAA AATCAAGTTG TTGAAACCTA TTTCAGGGAG ATTGAGAGCC
CAGTGGGAAA TGGGCATTGT CCAGGCTGAG GAAGCTGCTA GCATGTCAGT AGAGGAGCGG
AAAGCCAAGT TTACTTTCCT TTATGTGGGG GACCAACTGC GCCTCAACCC TCAAGTGGCT
AAGGAGGCTG GCATTGCTAC AGAACCTTTG GGAGAAATGG TGGACTCTTC AGTGGCCAAT
GAAGAAGCTG CTGTAGACCC TGGGACTATG AGAGAAGAGG ACATTCCCGT AAAGAGAAGG
CGAAGAGCCA AAAGGTCTAG TTCTGCTGAG AACCAGGAAG GAGACCCCGG CACAGAAAAG
AGTACACCTC CAAAGATGGC GGATGCTGAA CCTAAGAGAG GCGTAGGTTC TCCTGCCGGG
AGGAAAAGGT CCACAGGATC TGCCTCACGG AGCAGAAAGG GAGACTCAGC AGCCCAGTTC
TTAGTCTTTT GTCAAAAACA CAGGGATGAG GTCGTAGCTG AACACCCAGA TGCCTCAGAG
GAGGAGATTG AAGAATTGCT TGGGTCCCAA TGGAGCATGC TCAATGAAAA GCAGAAAGCA
CGATATAATA CAAAGTTTTC CCTAATGATC TCTGCCCAGT CTGAAGAAGA CTCTGGAAAT
ACCAGTGGGA AAAAAAGGAC CCACACAAAA AGGACAGATG ACCCTCCTGA GGATGTGGAT
GTAGAAGACG CACCCAGGAA AAGACTTAGG ACAGATAAGC ACAGTCTTCG GAAGAGAGAG
ACAATCACCG ACAAAACGGC CAGAACGAGC TCGTACAAGG CTATAGAGGC AGCCTCCTCA
CTCAAGAGCC AGGCAGCAAC GAAAAATTTG TCTGATGCTT GCAAACCACT GAAGAAGCGA
AATCGGGCTT CTGCAACAGC GTCTTCAGCA CTTGGGTTTA ACAAAAGTTC ATCTCCTTCT
GCATCCTTAA CTGAGAATGA GGTCTCAGAC AACCCAGGAG ATGAACCGTC AGAGTCTCCG
TATGAAAGTG CAGATGAAAC ACAGACTGAA GCGTCCGTCT CATCTAAGAA ATCTGAAAGA
GGAATGGCTG CCAAAAAGGA GTACGTGTGT CAGCTGTGTG AGAAGACAGG CAGTCTCTTA
CTGTGTGAAG GCCCCTGTTG TGGAGCATTC CACTTAGCCT GCCTTGGACT TTCCCAGAGA
CCAGAAGGAA GATTCACCTG CACTGAATGT GCCTCAGGGA TTCACTCATG CTTCGTATGT
AAAGAAAGCA AGATGGAGGT GAAACGCTGT ATGGTAAACC AATGTGGAAA GTTTTACCAT
GAAGCCTGTG TGAAAAAATA CCCTCTCACT GTGTTTGAGA GCCGAGGCTT TCGCTGTCCT
CTCCACAGCT GTATGAGCTG CCATGCCTCA AACCCTTCAA ATCCGCGGCC ATCAAAAGGT
AAAATGATGC GGTGCGTCCG ATGCCCTGTC GCCTATCATG GCGGGGATGC CTGCCTGGCA
GCGGGATGTT CCGTGATTGC TTCTAACAGC ATAATCTGCA CAGGCCACTT CACTGCCCGC
AAGGGGAAGC GGCACCACAC TCATGTCAAT GTGAGCTGGT GCTTCGTGTG CTCCAAAGGG
GGAAGCCTTC TGTGCTGCGA GGCCTGTCCG GCAGCCTTCC ACCCTGATTG TTTGAGCATC
GAGATGCCTG ATGGCAGCTG GTTCTGCAAT GACTGCCGAG CTGGGAAGAA GCTCCACTTT
CAAGACATCA TTTGGGTCAA ACTTGGGAAC TACAGATGGT GGCCAGCAGA AGTTTGCCAT
CCCAAAAATG TTCCCCCAAA TATTCAGAAA ATGAAGCACG AGATTGGAGA ATTCCCTGTG
TTTTTCTTCG GGTCTAAAGA TTATTACTGG ACGCATCAGG CACGAGTGTT CCCATACATG
GAGGGGGACC GGGGCAGCCG CTACCAGGGG GTCAGAGGGA TTGGAAGAGT CTTCAAGAAC
GCATTGCAAG AAGCCGAAGC TCGTTTTAAT GAAATCAAAC TTCAGCGGGA AGCCCGAGAA
ACACAGGAGA GTGAGAGAAA GCCTCCACCA TACAAGCATA TCAAGGTGAA TAAACCTTAT
GGTAAAGTCC AGATCTATAC AGCTGACATT TCTGAAATCC CAAAATGCAA CTGTAAGCCC
ACGGATGAGA ACCCCTGTGG CTCTGATTCA GAGTGTCTAA ACAGGATGCT AATGTTTGAG
TGCCACCCGC AGGTGTGCCC TGCAGGGGAA TATTGCCAGA ACCAGTGTTT CACTAAGCGC
CAGTACCCGG AGACCAAGAT CATCAAGACC GATGGCAAAG GGTGGGGCCT GGTTGCCAAA
AGGGACATCA GAAAGGGAGA ATTTGTTAAT GAGTATGTTG GCGAACTGAT TGATGAAGAG
GAGTGTATGG CAAGAATCAA ATATGCACAT GAGAATGACA TCACTCACTT TTACATGCTC
ACCATAGACA AGGACCGCAT AATTGATGCT GGCCCCAAAG GGAATTACTC GCGGTTCATG
AACCATAGCT GCCAGCCCAA CTGTGAGACC CTGAAGTGGA CAGTGAATGG GGACACACGG
GTTGGCCTGT TTGCTGTGTG CGACATCCCT GCAGGTACAG AGCTGACTTT CAACTATAAC
CTCGATTGTT TGGGCAATGA AAAGACAGTC TGTCGGTGTG GAGCCTCCAA CTGTAGTGGG
TTCCTTGGAG ACAGACCAAA GACATCAACA TCCCTTTCTT CAGAGGAAAA GAGTAAAAAG
GCCAAGAAGA AAACCAGGAG GCGCAGAGCC AAGGGTGAAG GAAAGCGGCA GTCAGAGGAC
GAATGCTTCC GCTGTGGTGA TGGCGGACAA CTGGTGCTGT GTGACCGCAA GTTCTGCACC
AAGGCCTACC ACCTATCCTG CTTGGGCTTG GGCAAGCGGC CCTTTGGGAA GTGGGAATGT
CCTTGGCATC ACTGTGATGT GTGTGGCAAA CCTTCTACCT CATTTTGCCA CCTCTGCCCC
AACTCATTCT GTAAGGAACA CCAAGATGGG ACTGCTTTCC GCTCCACCCA GGATGGGCAA
TCCTACTGCT GTGAGCATGA CCTGAGGGCA GACTCTGCAA ATAATACCAA GACTGAGAAA
CCCTTTCTAG ACTCACTCAA GGCGAAGGGG AAGAGGAAGA AAAGGCGGTG CTGGCGAAGG
GTCACAGACG GCAAATAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeqXP_008768585.1
CDS781..4878
Misc Feature(1)1432..1791(+)
Misc Feature(2)1468..1596(+)
Misc Feature(3)2158..>2295(+)
Misc Feature(4)2158..2253(+)
Misc Feature(5)2416..2910(+)
Misc Feature(6)2785..2913(+)
Misc Feature(7)2785..2895(+)
Misc Feature(8)2788..2910(+)
Misc Feature(9)2926..3066(+)
Misc Feature(10)2926..3051(+)
Misc Feature(11)2929..3066(+)
Misc Feature(12)3067..3228(+)
Misc Feature(13)3067..3213(+)
Misc Feature(14)3070..3228(+)
Misc Feature(15)3277..3399(+)
Misc Feature(16)3277..3381(+)
Misc Feature(17)3280..3396(+)
Misc Feature(18)3412..3696(+)
Misc Feature(19)3442..3561(+)
Misc Feature(20)3814..3966(+)
Misc Feature(21)3967..4338(+)
Misc Feature(22)4501..4629(+)
Misc Feature(23)4501..4614(+)
Misc Feature(24)4504..4629(+)
Translation
Position Chain Variation Link

Target ORF information:

RefSeq Version XM_008770363
Organism Rattus norvegicus (Norway rat)
Definition PREDICTED: Rattus norvegicus Wolf-Hirschhorn syndrome candidate 1 (Whsc1), transcript variant X7, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_008770363

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
ATGGAATTTA GCATCAGAAA AAGTCCTCTT TCTGTTCAGA AAGTTGTAAA GTGCATGAAG 
ATGAAGCAGG CACCAGAAAT CCTTGGCAGT GCAAATGGAA AGACTCAGAA CTGTGAAGTG
AATCACGAAT GTTCTGTATT CCTCAGCAAA GCTCAGCTTT CTAACAGCCT ACAGGAGGGG
GTCATGCAGA AATTTAACGG GCATGATGCA CTCCCCTTTC TTCCAGCAGA GAAGTTGAAA
GATCTTACTT CTTGTGTGTT TAATGGAGAA CCTGGTGCTC ATGATACTAA GTTGTGTTTT
GAGACCCAGG AAGTAAAAGG AATTGGGACA CCACCCAATA CTACTCCTAT CAAAAATGGC
TCTCCAGAAA TTAAACTGAA AATCACCAAA ACATACATGA ATGGGAAACC TCTCTTTGAA
TCTTCAATTT GTGGTGATGG CGCTGCTGAT ATGTCTCAGT CAGAAGAAAA TGGACAAAAA
TCGGATAATA AGACTAGGAG GAACAGGAAG AGGAGCATAA AATATGACTC TTTGCTGGAG
CAGGGCCTTG TGGAAGCAGC TTTAGTGTCC AAGATCTCAA GTCCTGAAGA TAAAAAGATT
CCAGTTAAGA AGGAGTCCTG TCCAAATAGT GGCAGAGACA GAGACCTCTT GTTAAAATAC
AACGTTGGTG ATTTGGTGTG GTCCAAAGTG TCAGGTTACC CTTGGTGGCC TTGCATGGTT
TCTGCTGATC CACTCCTTCA CAATCATACC AAACTTAAAG GTCAGAAAAA AAGTGCACGC
CAGTATCATG TACAATTCTT TGGTGATGCC CCAGAAAGAG CTTGGATATT TGAGAAGAGC
CTTGTTGCTT TTGAAGGAGA AGAACAATTT GAAAAATTAT GCCAAGAAAG TGCCAAGCAG
GCACCCACGA AAGCTGAGAA AATCAAGTTG TTGAAACCTA TTTCAGGGAG ATTGAGAGCC
CAGTGGGAAA TGGGCATTGT CCAGGCTGAG GAAGCTGCTA GCATGTCAGT AGAGGAGCGG
AAAGCCAAGT TTACTTTCCT TTATGTGGGG GACCAACTGC GCCTCAACCC TCAAGTGGCT
AAGGAGGCTG GCATTGCTAC AGAACCTTTG GGAGAAATGG TGGACTCTTC AGTGGCCAAT
GAAGAAGCTG CTGTAGACCC TGGGACTATG AGAGAAGAGG ACATTCCCGT AAAGAGAAGG
CGAAGAGCCA AAAGGTCTAG TTCTGCTGAG AACCAGGAAG GAGACCCCGG CACAGAAAAG
AGTACACCTC CAAAGATGGC GGATGCTGAA CCTAAGAGAG GCGTAGGTTC TCCTGCCGGG
AGGAAAAGGT CCACAGGATC TGCCTCACGG AGCAGAAAGG GAGACTCAGC AGCCCAGTTC
TTAGTCTTTT GTCAAAAACA CAGGGATGAG GTCGTAGCTG AACACCCAGA TGCCTCAGAG
GAGGAGATTG AAGAATTGCT TGGGTCCCAA TGGAGCATGC TCAATGAAAA GCAGAAAGCA
CGATATAATA CAAAGTTTTC CCTAATGATC TCTGCCCAGT CTGAAGAAGA CTCTGGAAAT
ACCAGTGGGA AAAAAAGGAC CCACACAAAA AGGACAGATG ACCCTCCTGA GGATGTGGAT
GTAGAAGACG CACCCAGGAA AAGACTTAGG ACAGATAAGC ACAGTCTTCG GAAGAGAGAG
ACAATCACCG ACAAAACGGC CAGAACGAGC TCGTACAAGG CTATAGAGGC AGCCTCCTCA
CTCAAGAGCC AGGCAGCAAC GAAAAATTTG TCTGATGCTT GCAAACCACT GAAGAAGCGA
AATCGGGCTT CTGCAACAGC GTCTTCAGCA CTTGGGTTTA ACAAAAGTTC ATCTCCTTCT
GCATCCTTAA CTGAGAATGA GGTCTCAGAC AACCCAGGAG ATGAACCGTC AGAGTCTCCG
TATGAAAGTG CAGATGAAAC ACAGACTGAA GCGTCCGTCT CATCTAAGAA ATCTGAAAGA
GGAATGGCTG CCAAAAAGGA GTACGTGTGT CAGCTGTGTG AGAAGACAGG CAGTCTCTTA
CTGTGTGAAG GCCCCTGTTG TGGAGCATTC CACTTAGCCT GCCTTGGACT TTCCCAGAGA
CCAGAAGGAA GATTCACCTG CACTGAATGT GCCTCAGGGA TTCACTCATG CTTCGTATGT
AAAGAAAGCA AGATGGAGGT GAAACGCTGT ATGGTAAACC AATGTGGAAA GTTTTACCAT
GAAGCCTGTG TGAAAAAATA CCCTCTCACT GTGTTTGAGA GCCGAGGCTT TCGCTGTCCT
CTCCACAGCT GTATGAGCTG CCATGCCTCA AACCCTTCAA ATCCGCGGCC ATCAAAAGGT
AAAATGATGC GGTGCGTCCG ATGCCCTGTC GCCTATCATG GCGGGGATGC CTGCCTGGCA
GCGGGATGTT CCGTGATTGC TTCTAACAGC ATAATCTGCA CAGGCCACTT CACTGCCCGC
AAGGGGAAGC GGCACCACAC TCATGTCAAT GTGAGCTGGT GCTTCGTGTG CTCCAAAGGG
GGAAGCCTTC TGTGCTGCGA GGCCTGTCCG GCAGCCTTCC ACCCTGATTG TTTGAGCATC
GAGATGCCTG ATGGCAGCTG GTTCTGCAAT GACTGCCGAG CTGGGAAGAA GCTCCACTTT
CAAGACATCA TTTGGGTCAA ACTTGGGAAC TACAGATGGT GGCCAGCAGA AGTTTGCCAT
CCCAAAAATG TTCCCCCAAA TATTCAGAAA ATGAAGCACG AGATTGGAGA ATTCCCTGTG
TTTTTCTTCG GGTCTAAAGA TTATTACTGG ACGCATCAGG CACGAGTGTT CCCATACATG
GAGGGGGACC GGGGCAGCCG CTACCAGGGG GTCAGAGGGA TTGGAAGAGT CTTCAAGAAC
GCATTGCAAG AAGCCGAAGC TCGTTTTAAT GAAATCAAAC TTCAGCGGGA AGCCCGAGAA
ACACAGGAGA GTGAGAGAAA GCCTCCACCA TACAAGCATA TCAAGGTGAA TAAACCTTAT
GGTAAAGTCC AGATCTATAC AGCTGACATT TCTGAAATCC CAAAATGCAA CTGTAAGCCC
ACGGATGAGA ACCCCTGTGG CTCTGATTCA GAGTGTCTAA ACAGGATGCT AATGTTTGAG
TGCCACCCGC AGGTGTGCCC TGCAGGGGAA TATTGCCAGA ACCAGTGTTT CACTAAGCGC
CAGTACCCGG AGACCAAGAT CATCAAGACC GATGGCAAAG GGTGGGGCCT GGTTGCCAAA
AGGGACATCA GAAAGGGAGA ATTTGTTAAT GAGTATGTTG GCGAACTGAT TGATGAAGAG
GAGTGTATGG CAAGAATCAA ATATGCACAT GAGAATGACA TCACTCACTT TTACATGCTC
ACCATAGACA AGGACCGCAT AATTGATGCT GGCCCCAAAG GGAATTACTC GCGGTTCATG
AACCATAGCT GCCAGCCCAA CTGTGAGACC CTGAAGTGGA CAGTGAATGG GGACACACGG
GTTGGCCTGT TTGCTGTGTG CGACATCCCT GCAGGTACAG AGCTGACTTT CAACTATAAC
CTCGATTGTT TGGGCAATGA AAAGACAGTC TGTCGGTGTG GAGCCTCCAA CTGTAGTGGG
TTCCTTGGAG ACAGACCAAA GACATCAACA TCCCTTTCTT CAGAGGAAAA GAGTAAAAAG
GCCAAGAAGA AAACCAGGAG GCGCAGAGCC AAGGGTGAAG GAAAGCGGCA GTCAGAGGAC
GAATGCTTCC GCTGTGGTGA TGGCGGACAA CTGGTGCTGT GTGACCGCAA GTTCTGCACC
AAGGCCTACC ACCTATCCTG CTTGGGCTTG GGCAAGCGGC CCTTTGGGAA GTGGGAATGT
CCTTGGCATC ACTGTGATGT GTGTGGCAAA CCTTCTACCT CATTTTGCCA CCTCTGCCCC
AACTCATTCT GTAAGGAACA CCAAGATGGG ACTGCTTTCC GCTCCACCCA GGATGGGCAA
TCCTACTGCT GTGAGCATGA CCTGAGGGCA GACTCTGCAA ATAATACCAA GACTGAGAAA
CCCTTTCTAG ACTCACTCAA GGCGAAGGGG AAGAGGAAGA AAAGGCGGTG CTGGCGAAGG
GTCACAGACG GCAAATAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ORa36339
Accession Version XM_008770364.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 4098bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 07-AUG-2014
Organism Rattus norvegicus (Norway rat)
Product histone-lysine N-methyltransferase NSD2 isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_007905987.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
ATGGAATTTA GCATCAGAAA AAGTCCTCTT TCTGTTCAGA AAGTTGTAAA GTGCATGAAG 
ATGAAGCAGG CACCAGAAAT CCTTGGCAGT GCAAATGGAA AGACTCAGAA CTGTGAAGTG
AATCACGAAT GTTCTGTATT CCTCAGCAAA GCTCAGCTTT CTAACAGCCT ACAGGAGGGG
GTCATGCAGA AATTTAACGG GCATGATGCA CTCCCCTTTC TTCCAGCAGA GAAGTTGAAA
GATCTTACTT CTTGTGTGTT TAATGGAGAA CCTGGTGCTC ATGATACTAA GTTGTGTTTT
GAGACCCAGG AAGTAAAAGG AATTGGGACA CCACCCAATA CTACTCCTAT CAAAAATGGC
TCTCCAGAAA TTAAACTGAA AATCACCAAA ACATACATGA ATGGGAAACC TCTCTTTGAA
TCTTCAATTT GTGGTGATGG CGCTGCTGAT ATGTCTCAGT CAGAAGAAAA TGGACAAAAA
TCGGATAATA AGACTAGGAG GAACAGGAAG AGGAGCATAA AATATGACTC TTTGCTGGAG
CAGGGCCTTG TGGAAGCAGC TTTAGTGTCC AAGATCTCAA GTCCTGAAGA TAAAAAGATT
CCAGTTAAGA AGGAGTCCTG TCCAAATAGT GGCAGAGACA GAGACCTCTT GTTAAAATAC
AACGTTGGTG ATTTGGTGTG GTCCAAAGTG TCAGGTTACC CTTGGTGGCC TTGCATGGTT
TCTGCTGATC CACTCCTTCA CAATCATACC AAACTTAAAG GTCAGAAAAA AAGTGCACGC
CAGTATCATG TACAATTCTT TGGTGATGCC CCAGAAAGAG CTTGGATATT TGAGAAGAGC
CTTGTTGCTT TTGAAGGAGA AGAACAATTT GAAAAATTAT GCCAAGAAAG TGCCAAGCAG
GCACCCACGA AAGCTGAGAA AATCAAGTTG TTGAAACCTA TTTCAGGGAG ATTGAGAGCC
CAGTGGGAAA TGGGCATTGT CCAGGCTGAG GAAGCTGCTA GCATGTCAGT AGAGGAGCGG
AAAGCCAAGT TTACTTTCCT TTATGTGGGG GACCAACTGC GCCTCAACCC TCAAGTGGCT
AAGGAGGCTG GCATTGCTAC AGAACCTTTG GGAGAAATGG TGGACTCTTC AGTGGCCAAT
GAAGAAGCTG CTGTAGACCC TGGGACTATG AGAGAAGAGG ACATTCCCGT AAAGAGAAGG
CGAAGAGCCA AAAGGTCTAG TTCTGCTGAG AACCAGGAAG GAGACCCCGG CACAGAAAAG
AGTACACCTC CAAAGATGGC GGATGCTGAA CCTAAGAGAG GCGTAGGTTC TCCTGCCGGG
AGGAAAAGGT CCACAGGATC TGCCTCACGG AGCAGAAAGG GAGACTCAGC AGCCCAGTTC
TTAGTCTTTT GTCAAAAACA CAGGGATGAG GTCGTAGCTG AACACCCAGA TGCCTCAGAG
GAGGAGATTG AAGAATTGCT TGGGTCCCAA TGGAGCATGC TCAATGAAAA GCAGAAAGCA
CGATATAATA CAAAGTTTTC CCTAATGATC TCTGCCCAGT CTGAAGAAGA CTCTGGAAAT
ACCAGTGGGA AAAAAAGGAC CCACACAAAA AGGACAGATG ACCCTCCTGA GGATGTGGAT
GTAGAAGACG CACCCAGGAA AAGACTTAGG ACAGATAAGC ACAGTCTTCG GAAGAGAGAG
ACAATCACCG ACAAAACGGC CAGAACGAGC TCGTACAAGG CTATAGAGGC AGCCTCCTCA
CTCAAGAGCC AGGCAGCAAC GAAAAATTTG TCTGATGCTT GCAAACCACT GAAGAAGCGA
AATCGGGCTT CTGCAACAGC GTCTTCAGCA CTTGGGTTTA ACAAAAGTTC ATCTCCTTCT
GCATCCTTAA CTGAGAATGA GGTCTCAGAC AACCCAGGAG ATGAACCGTC AGAGTCTCCG
TATGAAAGTG CAGATGAAAC ACAGACTGAA GCGTCCGTCT CATCTAAGAA ATCTGAAAGA
GGAATGGCTG CCAAAAAGGA GTACGTGTGT CAGCTGTGTG AGAAGACAGG CAGTCTCTTA
CTGTGTGAAG GCCCCTGTTG TGGAGCATTC CACTTAGCCT GCCTTGGACT TTCCCAGAGA
CCAGAAGGAA GATTCACCTG CACTGAATGT GCCTCAGGGA TTCACTCATG CTTCGTATGT
AAAGAAAGCA AGATGGAGGT GAAACGCTGT ATGGTAAACC AATGTGGAAA GTTTTACCAT
GAAGCCTGTG TGAAAAAATA CCCTCTCACT GTGTTTGAGA GCCGAGGCTT TCGCTGTCCT
CTCCACAGCT GTATGAGCTG CCATGCCTCA AACCCTTCAA ATCCGCGGCC ATCAAAAGGT
AAAATGATGC GGTGCGTCCG ATGCCCTGTC GCCTATCATG GCGGGGATGC CTGCCTGGCA
GCGGGATGTT CCGTGATTGC TTCTAACAGC ATAATCTGCA CAGGCCACTT CACTGCCCGC
AAGGGGAAGC GGCACCACAC TCATGTCAAT GTGAGCTGGT GCTTCGTGTG CTCCAAAGGG
GGAAGCCTTC TGTGCTGCGA GGCCTGTCCG GCAGCCTTCC ACCCTGATTG TTTGAGCATC
GAGATGCCTG ATGGCAGCTG GTTCTGCAAT GACTGCCGAG CTGGGAAGAA GCTCCACTTT
CAAGACATCA TTTGGGTCAA ACTTGGGAAC TACAGATGGT GGCCAGCAGA AGTTTGCCAT
CCCAAAAATG TTCCCCCAAA TATTCAGAAA ATGAAGCACG AGATTGGAGA ATTCCCTGTG
TTTTTCTTCG GGTCTAAAGA TTATTACTGG ACGCATCAGG CACGAGTGTT CCCATACATG
GAGGGGGACC GGGGCAGCCG CTACCAGGGG GTCAGAGGGA TTGGAAGAGT CTTCAAGAAC
GCATTGCAAG AAGCCGAAGC TCGTTTTAAT GAAATCAAAC TTCAGCGGGA AGCCCGAGAA
ACACAGGAGA GTGAGAGAAA GCCTCCACCA TACAAGCATA TCAAGGTGAA TAAACCTTAT
GGTAAAGTCC AGATCTATAC AGCTGACATT TCTGAAATCC CAAAATGCAA CTGTAAGCCC
ACGGATGAGA ACCCCTGTGG CTCTGATTCA GAGTGTCTAA ACAGGATGCT AATGTTTGAG
TGCCACCCGC AGGTGTGCCC TGCAGGGGAA TATTGCCAGA ACCAGTGTTT CACTAAGCGC
CAGTACCCGG AGACCAAGAT CATCAAGACC GATGGCAAAG GGTGGGGCCT GGTTGCCAAA
AGGGACATCA GAAAGGGAGA ATTTGTTAAT GAGTATGTTG GCGAACTGAT TGATGAAGAG
GAGTGTATGG CAAGAATCAA ATATGCACAT GAGAATGACA TCACTCACTT TTACATGCTC
ACCATAGACA AGGACCGCAT AATTGATGCT GGCCCCAAAG GGAATTACTC GCGGTTCATG
AACCATAGCT GCCAGCCCAA CTGTGAGACC CTGAAGTGGA CAGTGAATGG GGACACACGG
GTTGGCCTGT TTGCTGTGTG CGACATCCCT GCAGGTACAG AGCTGACTTT CAACTATAAC
CTCGATTGTT TGGGCAATGA AAAGACAGTC TGTCGGTGTG GAGCCTCCAA CTGTAGTGGG
TTCCTTGGAG ACAGACCAAA GACATCAACA TCCCTTTCTT CAGAGGAAAA GAGTAAAAAG
GCCAAGAAGA AAACCAGGAG GCGCAGAGCC AAGGGTGAAG GAAAGCGGCA GTCAGAGGAC
GAATGCTTCC GCTGTGGTGA TGGCGGACAA CTGGTGCTGT GTGACCGCAA GTTCTGCACC
AAGGCCTACC ACCTATCCTG CTTGGGCTTG GGCAAGCGGC CCTTTGGGAA GTGGGAATGT
CCTTGGCATC ACTGTGATGT GTGTGGCAAA CCTTCTACCT CATTTTGCCA CCTCTGCCCC
AACTCATTCT GTAAGGAACA CCAAGATGGG ACTGCTTTCC GCTCCACCCA GGATGGGCAA
TCCTACTGCT GTGAGCATGA CCTGAGGGCA GACTCTGCAA ATAATACCAA GACTGAGAAA
CCCTTTCTAG ACTCACTCAA GGCGAAGGGG AAGAGGAAGA AAAGGCGGTG CTGGCGAAGG
GTCACAGACG GCAAATAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeqXP_008768586.1
CDS736..4833
Misc Feature(1)1387..1746(+)
Misc Feature(2)1423..1551(+)
Misc Feature(3)2113..>2250(+)
Misc Feature(4)2113..2208(+)
Misc Feature(5)2371..2865(+)
Misc Feature(6)2740..2868(+)
Misc Feature(7)2740..2850(+)
Misc Feature(8)2743..2865(+)
Misc Feature(9)2881..3021(+)
Misc Feature(10)2881..3006(+)
Misc Feature(11)2884..3021(+)
Misc Feature(12)3022..3183(+)
Misc Feature(13)3022..3168(+)
Misc Feature(14)3025..3183(+)
Misc Feature(15)3232..3354(+)
Misc Feature(16)3232..3336(+)
Misc Feature(17)3235..3351(+)
Misc Feature(18)3367..3651(+)
Misc Feature(19)3397..3516(+)
Misc Feature(20)3769..3921(+)
Misc Feature(21)3922..4293(+)
Misc Feature(22)4456..4584(+)
Misc Feature(23)4456..4569(+)
Misc Feature(24)4459..4584(+)
Translation
Position Chain Variation Link

Target ORF information:

RefSeq Version XM_008770364
Organism Rattus norvegicus (Norway rat)
Definition PREDICTED: Rattus norvegicus Wolf-Hirschhorn syndrome candidate 1 (Whsc1), transcript variant X8, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_008770364

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
ATGGAATTTA GCATCAGAAA AAGTCCTCTT TCTGTTCAGA AAGTTGTAAA GTGCATGAAG 
ATGAAGCAGG CACCAGAAAT CCTTGGCAGT GCAAATGGAA AGACTCAGAA CTGTGAAGTG
AATCACGAAT GTTCTGTATT CCTCAGCAAA GCTCAGCTTT CTAACAGCCT ACAGGAGGGG
GTCATGCAGA AATTTAACGG GCATGATGCA CTCCCCTTTC TTCCAGCAGA GAAGTTGAAA
GATCTTACTT CTTGTGTGTT TAATGGAGAA CCTGGTGCTC ATGATACTAA GTTGTGTTTT
GAGACCCAGG AAGTAAAAGG AATTGGGACA CCACCCAATA CTACTCCTAT CAAAAATGGC
TCTCCAGAAA TTAAACTGAA AATCACCAAA ACATACATGA ATGGGAAACC TCTCTTTGAA
TCTTCAATTT GTGGTGATGG CGCTGCTGAT ATGTCTCAGT CAGAAGAAAA TGGACAAAAA
TCGGATAATA AGACTAGGAG GAACAGGAAG AGGAGCATAA AATATGACTC TTTGCTGGAG
CAGGGCCTTG TGGAAGCAGC TTTAGTGTCC AAGATCTCAA GTCCTGAAGA TAAAAAGATT
CCAGTTAAGA AGGAGTCCTG TCCAAATAGT GGCAGAGACA GAGACCTCTT GTTAAAATAC
AACGTTGGTG ATTTGGTGTG GTCCAAAGTG TCAGGTTACC CTTGGTGGCC TTGCATGGTT
TCTGCTGATC CACTCCTTCA CAATCATACC AAACTTAAAG GTCAGAAAAA AAGTGCACGC
CAGTATCATG TACAATTCTT TGGTGATGCC CCAGAAAGAG CTTGGATATT TGAGAAGAGC
CTTGTTGCTT TTGAAGGAGA AGAACAATTT GAAAAATTAT GCCAAGAAAG TGCCAAGCAG
GCACCCACGA AAGCTGAGAA AATCAAGTTG TTGAAACCTA TTTCAGGGAG ATTGAGAGCC
CAGTGGGAAA TGGGCATTGT CCAGGCTGAG GAAGCTGCTA GCATGTCAGT AGAGGAGCGG
AAAGCCAAGT TTACTTTCCT TTATGTGGGG GACCAACTGC GCCTCAACCC TCAAGTGGCT
AAGGAGGCTG GCATTGCTAC AGAACCTTTG GGAGAAATGG TGGACTCTTC AGTGGCCAAT
GAAGAAGCTG CTGTAGACCC TGGGACTATG AGAGAAGAGG ACATTCCCGT AAAGAGAAGG
CGAAGAGCCA AAAGGTCTAG TTCTGCTGAG AACCAGGAAG GAGACCCCGG CACAGAAAAG
AGTACACCTC CAAAGATGGC GGATGCTGAA CCTAAGAGAG GCGTAGGTTC TCCTGCCGGG
AGGAAAAGGT CCACAGGATC TGCCTCACGG AGCAGAAAGG GAGACTCAGC AGCCCAGTTC
TTAGTCTTTT GTCAAAAACA CAGGGATGAG GTCGTAGCTG AACACCCAGA TGCCTCAGAG
GAGGAGATTG AAGAATTGCT TGGGTCCCAA TGGAGCATGC TCAATGAAAA GCAGAAAGCA
CGATATAATA CAAAGTTTTC CCTAATGATC TCTGCCCAGT CTGAAGAAGA CTCTGGAAAT
ACCAGTGGGA AAAAAAGGAC CCACACAAAA AGGACAGATG ACCCTCCTGA GGATGTGGAT
GTAGAAGACG CACCCAGGAA AAGACTTAGG ACAGATAAGC ACAGTCTTCG GAAGAGAGAG
ACAATCACCG ACAAAACGGC CAGAACGAGC TCGTACAAGG CTATAGAGGC AGCCTCCTCA
CTCAAGAGCC AGGCAGCAAC GAAAAATTTG TCTGATGCTT GCAAACCACT GAAGAAGCGA
AATCGGGCTT CTGCAACAGC GTCTTCAGCA CTTGGGTTTA ACAAAAGTTC ATCTCCTTCT
GCATCCTTAA CTGAGAATGA GGTCTCAGAC AACCCAGGAG ATGAACCGTC AGAGTCTCCG
TATGAAAGTG CAGATGAAAC ACAGACTGAA GCGTCCGTCT CATCTAAGAA ATCTGAAAGA
GGAATGGCTG CCAAAAAGGA GTACGTGTGT CAGCTGTGTG AGAAGACAGG CAGTCTCTTA
CTGTGTGAAG GCCCCTGTTG TGGAGCATTC CACTTAGCCT GCCTTGGACT TTCCCAGAGA
CCAGAAGGAA GATTCACCTG CACTGAATGT GCCTCAGGGA TTCACTCATG CTTCGTATGT
AAAGAAAGCA AGATGGAGGT GAAACGCTGT ATGGTAAACC AATGTGGAAA GTTTTACCAT
GAAGCCTGTG TGAAAAAATA CCCTCTCACT GTGTTTGAGA GCCGAGGCTT TCGCTGTCCT
CTCCACAGCT GTATGAGCTG CCATGCCTCA AACCCTTCAA ATCCGCGGCC ATCAAAAGGT
AAAATGATGC GGTGCGTCCG ATGCCCTGTC GCCTATCATG GCGGGGATGC CTGCCTGGCA
GCGGGATGTT CCGTGATTGC TTCTAACAGC ATAATCTGCA CAGGCCACTT CACTGCCCGC
AAGGGGAAGC GGCACCACAC TCATGTCAAT GTGAGCTGGT GCTTCGTGTG CTCCAAAGGG
GGAAGCCTTC TGTGCTGCGA GGCCTGTCCG GCAGCCTTCC ACCCTGATTG TTTGAGCATC
GAGATGCCTG ATGGCAGCTG GTTCTGCAAT GACTGCCGAG CTGGGAAGAA GCTCCACTTT
CAAGACATCA TTTGGGTCAA ACTTGGGAAC TACAGATGGT GGCCAGCAGA AGTTTGCCAT
CCCAAAAATG TTCCCCCAAA TATTCAGAAA ATGAAGCACG AGATTGGAGA ATTCCCTGTG
TTTTTCTTCG GGTCTAAAGA TTATTACTGG ACGCATCAGG CACGAGTGTT CCCATACATG
GAGGGGGACC GGGGCAGCCG CTACCAGGGG GTCAGAGGGA TTGGAAGAGT CTTCAAGAAC
GCATTGCAAG AAGCCGAAGC TCGTTTTAAT GAAATCAAAC TTCAGCGGGA AGCCCGAGAA
ACACAGGAGA GTGAGAGAAA GCCTCCACCA TACAAGCATA TCAAGGTGAA TAAACCTTAT
GGTAAAGTCC AGATCTATAC AGCTGACATT TCTGAAATCC CAAAATGCAA CTGTAAGCCC
ACGGATGAGA ACCCCTGTGG CTCTGATTCA GAGTGTCTAA ACAGGATGCT AATGTTTGAG
TGCCACCCGC AGGTGTGCCC TGCAGGGGAA TATTGCCAGA ACCAGTGTTT CACTAAGCGC
CAGTACCCGG AGACCAAGAT CATCAAGACC GATGGCAAAG GGTGGGGCCT GGTTGCCAAA
AGGGACATCA GAAAGGGAGA ATTTGTTAAT GAGTATGTTG GCGAACTGAT TGATGAAGAG
GAGTGTATGG CAAGAATCAA ATATGCACAT GAGAATGACA TCACTCACTT TTACATGCTC
ACCATAGACA AGGACCGCAT AATTGATGCT GGCCCCAAAG GGAATTACTC GCGGTTCATG
AACCATAGCT GCCAGCCCAA CTGTGAGACC CTGAAGTGGA CAGTGAATGG GGACACACGG
GTTGGCCTGT TTGCTGTGTG CGACATCCCT GCAGGTACAG AGCTGACTTT CAACTATAAC
CTCGATTGTT TGGGCAATGA AAAGACAGTC TGTCGGTGTG GAGCCTCCAA CTGTAGTGGG
TTCCTTGGAG ACAGACCAAA GACATCAACA TCCCTTTCTT CAGAGGAAAA GAGTAAAAAG
GCCAAGAAGA AAACCAGGAG GCGCAGAGCC AAGGGTGAAG GAAAGCGGCA GTCAGAGGAC
GAATGCTTCC GCTGTGGTGA TGGCGGACAA CTGGTGCTGT GTGACCGCAA GTTCTGCACC
AAGGCCTACC ACCTATCCTG CTTGGGCTTG GGCAAGCGGC CCTTTGGGAA GTGGGAATGT
CCTTGGCATC ACTGTGATGT GTGTGGCAAA CCTTCTACCT CATTTTGCCA CCTCTGCCCC
AACTCATTCT GTAAGGAACA CCAAGATGGG ACTGCTTTCC GCTCCACCCA GGATGGGCAA
TCCTACTGCT GTGAGCATGA CCTGAGGGCA GACTCTGCAA ATAATACCAA GACTGAGAAA
CCCTTTCTAG ACTCACTCAA GGCGAAGGGG AAGAGGAAGA AAAGGCGGTG CTGGCGAAGG
GTCACAGACG GCAAATAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ORa36339
Accession Version XM_006251378.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 4098bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 07-AUG-2014
Organism Rattus norvegicus (Norway rat)
Product histone-lysine N-methyltransferase NSD2 isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_007905987.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced gi:564384621. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
ATGGAATTTA GCATCAGAAA AAGTCCTCTT TCTGTTCAGA AAGTTGTAAA GTGCATGAAG 
ATGAAGCAGG CACCAGAAAT CCTTGGCAGT GCAAATGGAA AGACTCAGAA CTGTGAAGTG
AATCACGAAT GTTCTGTATT CCTCAGCAAA GCTCAGCTTT CTAACAGCCT ACAGGAGGGG
GTCATGCAGA AATTTAACGG GCATGATGCA CTCCCCTTTC TTCCAGCAGA GAAGTTGAAA
GATCTTACTT CTTGTGTGTT TAATGGAGAA CCTGGTGCTC ATGATACTAA GTTGTGTTTT
GAGACCCAGG AAGTAAAAGG AATTGGGACA CCACCCAATA CTACTCCTAT CAAAAATGGC
TCTCCAGAAA TTAAACTGAA AATCACCAAA ACATACATGA ATGGGAAACC TCTCTTTGAA
TCTTCAATTT GTGGTGATGG CGCTGCTGAT ATGTCTCAGT CAGAAGAAAA TGGACAAAAA
TCGGATAATA AGACTAGGAG GAACAGGAAG AGGAGCATAA AATATGACTC TTTGCTGGAG
CAGGGCCTTG TGGAAGCAGC TTTAGTGTCC AAGATCTCAA GTCCTGAAGA TAAAAAGATT
CCAGTTAAGA AGGAGTCCTG TCCAAATAGT GGCAGAGACA GAGACCTCTT GTTAAAATAC
AACGTTGGTG ATTTGGTGTG GTCCAAAGTG TCAGGTTACC CTTGGTGGCC TTGCATGGTT
TCTGCTGATC CACTCCTTCA CAATCATACC AAACTTAAAG GTCAGAAAAA AAGTGCACGC
CAGTATCATG TACAATTCTT TGGTGATGCC CCAGAAAGAG CTTGGATATT TGAGAAGAGC
CTTGTTGCTT TTGAAGGAGA AGAACAATTT GAAAAATTAT GCCAAGAAAG TGCCAAGCAG
GCACCCACGA AAGCTGAGAA AATCAAGTTG TTGAAACCTA TTTCAGGGAG ATTGAGAGCC
CAGTGGGAAA TGGGCATTGT CCAGGCTGAG GAAGCTGCTA GCATGTCAGT AGAGGAGCGG
AAAGCCAAGT TTACTTTCCT TTATGTGGGG GACCAACTGC GCCTCAACCC TCAAGTGGCT
AAGGAGGCTG GCATTGCTAC AGAACCTTTG GGAGAAATGG TGGACTCTTC AGTGGCCAAT
GAAGAAGCTG CTGTAGACCC TGGGACTATG AGAGAAGAGG ACATTCCCGT AAAGAGAAGG
CGAAGAGCCA AAAGGTCTAG TTCTGCTGAG AACCAGGAAG GAGACCCCGG CACAGAAAAG
AGTACACCTC CAAAGATGGC GGATGCTGAA CCTAAGAGAG GCGTAGGTTC TCCTGCCGGG
AGGAAAAGGT CCACAGGATC TGCCTCACGG AGCAGAAAGG GAGACTCAGC AGCCCAGTTC
TTAGTCTTTT GTCAAAAACA CAGGGATGAG GTCGTAGCTG AACACCCAGA TGCCTCAGAG
GAGGAGATTG AAGAATTGCT TGGGTCCCAA TGGAGCATGC TCAATGAAAA GCAGAAAGCA
CGATATAATA CAAAGTTTTC CCTAATGATC TCTGCCCAGT CTGAAGAAGA CTCTGGAAAT
ACCAGTGGGA AAAAAAGGAC CCACACAAAA AGGACAGATG ACCCTCCTGA GGATGTGGAT
GTAGAAGACG CACCCAGGAA AAGACTTAGG ACAGATAAGC ACAGTCTTCG GAAGAGAGAG
ACAATCACCG ACAAAACGGC CAGAACGAGC TCGTACAAGG CTATAGAGGC AGCCTCCTCA
CTCAAGAGCC AGGCAGCAAC GAAAAATTTG TCTGATGCTT GCAAACCACT GAAGAAGCGA
AATCGGGCTT CTGCAACAGC GTCTTCAGCA CTTGGGTTTA ACAAAAGTTC ATCTCCTTCT
GCATCCTTAA CTGAGAATGA GGTCTCAGAC AACCCAGGAG ATGAACCGTC AGAGTCTCCG
TATGAAAGTG CAGATGAAAC ACAGACTGAA GCGTCCGTCT CATCTAAGAA ATCTGAAAGA
GGAATGGCTG CCAAAAAGGA GTACGTGTGT CAGCTGTGTG AGAAGACAGG CAGTCTCTTA
CTGTGTGAAG GCCCCTGTTG TGGAGCATTC CACTTAGCCT GCCTTGGACT TTCCCAGAGA
CCAGAAGGAA GATTCACCTG CACTGAATGT GCCTCAGGGA TTCACTCATG CTTCGTATGT
AAAGAAAGCA AGATGGAGGT GAAACGCTGT ATGGTAAACC AATGTGGAAA GTTTTACCAT
GAAGCCTGTG TGAAAAAATA CCCTCTCACT GTGTTTGAGA GCCGAGGCTT TCGCTGTCCT
CTCCACAGCT GTATGAGCTG CCATGCCTCA AACCCTTCAA ATCCGCGGCC ATCAAAAGGT
AAAATGATGC GGTGCGTCCG ATGCCCTGTC GCCTATCATG GCGGGGATGC CTGCCTGGCA
GCGGGATGTT CCGTGATTGC TTCTAACAGC ATAATCTGCA CAGGCCACTT CACTGCCCGC
AAGGGGAAGC GGCACCACAC TCATGTCAAT GTGAGCTGGT GCTTCGTGTG CTCCAAAGGG
GGAAGCCTTC TGTGCTGCGA GGCCTGTCCG GCAGCCTTCC ACCCTGATTG TTTGAGCATC
GAGATGCCTG ATGGCAGCTG GTTCTGCAAT GACTGCCGAG CTGGGAAGAA GCTCCACTTT
CAAGACATCA TTTGGGTCAA ACTTGGGAAC TACAGATGGT GGCCAGCAGA AGTTTGCCAT
CCCAAAAATG TTCCCCCAAA TATTCAGAAA ATGAAGCACG AGATTGGAGA ATTCCCTGTG
TTTTTCTTCG GGTCTAAAGA TTATTACTGG ACGCATCAGG CACGAGTGTT CCCATACATG
GAGGGGGACC GGGGCAGCCG CTACCAGGGG GTCAGAGGGA TTGGAAGAGT CTTCAAGAAC
GCATTGCAAG AAGCCGAAGC TCGTTTTAAT GAAATCAAAC TTCAGCGGGA AGCCCGAGAA
ACACAGGAGA GTGAGAGAAA GCCTCCACCA TACAAGCATA TCAAGGTGAA TAAACCTTAT
GGTAAAGTCC AGATCTATAC AGCTGACATT TCTGAAATCC CAAAATGCAA CTGTAAGCCC
ACGGATGAGA ACCCCTGTGG CTCTGATTCA GAGTGTCTAA ACAGGATGCT AATGTTTGAG
TGCCACCCGC AGGTGTGCCC TGCAGGGGAA TATTGCCAGA ACCAGTGTTT CACTAAGCGC
CAGTACCCGG AGACCAAGAT CATCAAGACC GATGGCAAAG GGTGGGGCCT GGTTGCCAAA
AGGGACATCA GAAAGGGAGA ATTTGTTAAT GAGTATGTTG GCGAACTGAT TGATGAAGAG
GAGTGTATGG CAAGAATCAA ATATGCACAT GAGAATGACA TCACTCACTT TTACATGCTC
ACCATAGACA AGGACCGCAT AATTGATGCT GGCCCCAAAG GGAATTACTC GCGGTTCATG
AACCATAGCT GCCAGCCCAA CTGTGAGACC CTGAAGTGGA CAGTGAATGG GGACACACGG
GTTGGCCTGT TTGCTGTGTG CGACATCCCT GCAGGTACAG AGCTGACTTT CAACTATAAC
CTCGATTGTT TGGGCAATGA AAAGACAGTC TGTCGGTGTG GAGCCTCCAA CTGTAGTGGG
TTCCTTGGAG ACAGACCAAA GACATCAACA TCCCTTTCTT CAGAGGAAAA GAGTAAAAAG
GCCAAGAAGA AAACCAGGAG GCGCAGAGCC AAGGGTGAAG GAAAGCGGCA GTCAGAGGAC
GAATGCTTCC GCTGTGGTGA TGGCGGACAA CTGGTGCTGT GTGACCGCAA GTTCTGCACC
AAGGCCTACC ACCTATCCTG CTTGGGCTTG GGCAAGCGGC CCTTTGGGAA GTGGGAATGT
CCTTGGCATC ACTGTGATGT GTGTGGCAAA CCTTCTACCT CATTTTGCCA CCTCTGCCCC
AACTCATTCT GTAAGGAACA CCAAGATGGG ACTGCTTTCC GCTCCACCCA GGATGGGCAA
TCCTACTGCT GTGAGCATGA CCTGAGGGCA GACTCTGCAA ATAATACCAA GACTGAGAAA
CCCTTTCTAG ACTCACTCAA GGCGAAGGGG AAGAGGAAGA AAAGGCGGTG CTGGCGAAGG
GTCACAGACG GCAAATAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeqXP_006251440.1
CDS590..4687
Misc Feature(1)1241..1600(+)
Misc Feature(2)1277..1405(+)
Misc Feature(3)1967..>2104(+)
Misc Feature(4)1967..2062(+)
Misc Feature(5)2225..2719(+)
Misc Feature(6)2594..2722(+)
Misc Feature(7)2594..2704(+)
Misc Feature(8)2597..2719(+)
Misc Feature(9)2735..2875(+)
Misc Feature(10)2735..2860(+)
Misc Feature(11)2738..2875(+)
Misc Feature(12)2876..3037(+)
Misc Feature(13)2876..3022(+)
Misc Feature(14)2879..3037(+)
Misc Feature(15)3086..3208(+)
Misc Feature(16)3086..3190(+)
Misc Feature(17)3089..3205(+)
Misc Feature(18)3221..3505(+)
Misc Feature(19)3251..3370(+)
Misc Feature(20)3623..3775(+)
Misc Feature(21)3776..4147(+)
Misc Feature(22)4310..4438(+)
Misc Feature(23)4310..4423(+)
Misc Feature(24)4313..4438(+)
Translation
Position Chain Variation Link

Target ORF information:

RefSeq Version XM_006251378
Organism Rattus norvegicus (Norway rat)
Definition PREDICTED: Rattus norvegicus Wolf-Hirschhorn syndrome candidate 1 (Whsc1), transcript variant X9, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_006251378

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
ATGGAATTTA GCATCAGAAA AAGTCCTCTT TCTGTTCAGA AAGTTGTAAA GTGCATGAAG 
ATGAAGCAGG CACCAGAAAT CCTTGGCAGT GCAAATGGAA AGACTCAGAA CTGTGAAGTG
AATCACGAAT GTTCTGTATT CCTCAGCAAA GCTCAGCTTT CTAACAGCCT ACAGGAGGGG
GTCATGCAGA AATTTAACGG GCATGATGCA CTCCCCTTTC TTCCAGCAGA GAAGTTGAAA
GATCTTACTT CTTGTGTGTT TAATGGAGAA CCTGGTGCTC ATGATACTAA GTTGTGTTTT
GAGACCCAGG AAGTAAAAGG AATTGGGACA CCACCCAATA CTACTCCTAT CAAAAATGGC
TCTCCAGAAA TTAAACTGAA AATCACCAAA ACATACATGA ATGGGAAACC TCTCTTTGAA
TCTTCAATTT GTGGTGATGG CGCTGCTGAT ATGTCTCAGT CAGAAGAAAA TGGACAAAAA
TCGGATAATA AGACTAGGAG GAACAGGAAG AGGAGCATAA AATATGACTC TTTGCTGGAG
CAGGGCCTTG TGGAAGCAGC TTTAGTGTCC AAGATCTCAA GTCCTGAAGA TAAAAAGATT
CCAGTTAAGA AGGAGTCCTG TCCAAATAGT GGCAGAGACA GAGACCTCTT GTTAAAATAC
AACGTTGGTG ATTTGGTGTG GTCCAAAGTG TCAGGTTACC CTTGGTGGCC TTGCATGGTT
TCTGCTGATC CACTCCTTCA CAATCATACC AAACTTAAAG GTCAGAAAAA AAGTGCACGC
CAGTATCATG TACAATTCTT TGGTGATGCC CCAGAAAGAG CTTGGATATT TGAGAAGAGC
CTTGTTGCTT TTGAAGGAGA AGAACAATTT GAAAAATTAT GCCAAGAAAG TGCCAAGCAG
GCACCCACGA AAGCTGAGAA AATCAAGTTG TTGAAACCTA TTTCAGGGAG ATTGAGAGCC
CAGTGGGAAA TGGGCATTGT CCAGGCTGAG GAAGCTGCTA GCATGTCAGT AGAGGAGCGG
AAAGCCAAGT TTACTTTCCT TTATGTGGGG GACCAACTGC GCCTCAACCC TCAAGTGGCT
AAGGAGGCTG GCATTGCTAC AGAACCTTTG GGAGAAATGG TGGACTCTTC AGTGGCCAAT
GAAGAAGCTG CTGTAGACCC TGGGACTATG AGAGAAGAGG ACATTCCCGT AAAGAGAAGG
CGAAGAGCCA AAAGGTCTAG TTCTGCTGAG AACCAGGAAG GAGACCCCGG CACAGAAAAG
AGTACACCTC CAAAGATGGC GGATGCTGAA CCTAAGAGAG GCGTAGGTTC TCCTGCCGGG
AGGAAAAGGT CCACAGGATC TGCCTCACGG AGCAGAAAGG GAGACTCAGC AGCCCAGTTC
TTAGTCTTTT GTCAAAAACA CAGGGATGAG GTCGTAGCTG AACACCCAGA TGCCTCAGAG
GAGGAGATTG AAGAATTGCT TGGGTCCCAA TGGAGCATGC TCAATGAAAA GCAGAAAGCA
CGATATAATA CAAAGTTTTC CCTAATGATC TCTGCCCAGT CTGAAGAAGA CTCTGGAAAT
ACCAGTGGGA AAAAAAGGAC CCACACAAAA AGGACAGATG ACCCTCCTGA GGATGTGGAT
GTAGAAGACG CACCCAGGAA AAGACTTAGG ACAGATAAGC ACAGTCTTCG GAAGAGAGAG
ACAATCACCG ACAAAACGGC CAGAACGAGC TCGTACAAGG CTATAGAGGC AGCCTCCTCA
CTCAAGAGCC AGGCAGCAAC GAAAAATTTG TCTGATGCTT GCAAACCACT GAAGAAGCGA
AATCGGGCTT CTGCAACAGC GTCTTCAGCA CTTGGGTTTA ACAAAAGTTC ATCTCCTTCT
GCATCCTTAA CTGAGAATGA GGTCTCAGAC AACCCAGGAG ATGAACCGTC AGAGTCTCCG
TATGAAAGTG CAGATGAAAC ACAGACTGAA GCGTCCGTCT CATCTAAGAA ATCTGAAAGA
GGAATGGCTG CCAAAAAGGA GTACGTGTGT CAGCTGTGTG AGAAGACAGG CAGTCTCTTA
CTGTGTGAAG GCCCCTGTTG TGGAGCATTC CACTTAGCCT GCCTTGGACT TTCCCAGAGA
CCAGAAGGAA GATTCACCTG CACTGAATGT GCCTCAGGGA TTCACTCATG CTTCGTATGT
AAAGAAAGCA AGATGGAGGT GAAACGCTGT ATGGTAAACC AATGTGGAAA GTTTTACCAT
GAAGCCTGTG TGAAAAAATA CCCTCTCACT GTGTTTGAGA GCCGAGGCTT TCGCTGTCCT
CTCCACAGCT GTATGAGCTG CCATGCCTCA AACCCTTCAA ATCCGCGGCC ATCAAAAGGT
AAAATGATGC GGTGCGTCCG ATGCCCTGTC GCCTATCATG GCGGGGATGC CTGCCTGGCA
GCGGGATGTT CCGTGATTGC TTCTAACAGC ATAATCTGCA CAGGCCACTT CACTGCCCGC
AAGGGGAAGC GGCACCACAC TCATGTCAAT GTGAGCTGGT GCTTCGTGTG CTCCAAAGGG
GGAAGCCTTC TGTGCTGCGA GGCCTGTCCG GCAGCCTTCC ACCCTGATTG TTTGAGCATC
GAGATGCCTG ATGGCAGCTG GTTCTGCAAT GACTGCCGAG CTGGGAAGAA GCTCCACTTT
CAAGACATCA TTTGGGTCAA ACTTGGGAAC TACAGATGGT GGCCAGCAGA AGTTTGCCAT
CCCAAAAATG TTCCCCCAAA TATTCAGAAA ATGAAGCACG AGATTGGAGA ATTCCCTGTG
TTTTTCTTCG GGTCTAAAGA TTATTACTGG ACGCATCAGG CACGAGTGTT CCCATACATG
GAGGGGGACC GGGGCAGCCG CTACCAGGGG GTCAGAGGGA TTGGAAGAGT CTTCAAGAAC
GCATTGCAAG AAGCCGAAGC TCGTTTTAAT GAAATCAAAC TTCAGCGGGA AGCCCGAGAA
ACACAGGAGA GTGAGAGAAA GCCTCCACCA TACAAGCATA TCAAGGTGAA TAAACCTTAT
GGTAAAGTCC AGATCTATAC AGCTGACATT TCTGAAATCC CAAAATGCAA CTGTAAGCCC
ACGGATGAGA ACCCCTGTGG CTCTGATTCA GAGTGTCTAA ACAGGATGCT AATGTTTGAG
TGCCACCCGC AGGTGTGCCC TGCAGGGGAA TATTGCCAGA ACCAGTGTTT CACTAAGCGC
CAGTACCCGG AGACCAAGAT CATCAAGACC GATGGCAAAG GGTGGGGCCT GGTTGCCAAA
AGGGACATCA GAAAGGGAGA ATTTGTTAAT GAGTATGTTG GCGAACTGAT TGATGAAGAG
GAGTGTATGG CAAGAATCAA ATATGCACAT GAGAATGACA TCACTCACTT TTACATGCTC
ACCATAGACA AGGACCGCAT AATTGATGCT GGCCCCAAAG GGAATTACTC GCGGTTCATG
AACCATAGCT GCCAGCCCAA CTGTGAGACC CTGAAGTGGA CAGTGAATGG GGACACACGG
GTTGGCCTGT TTGCTGTGTG CGACATCCCT GCAGGTACAG AGCTGACTTT CAACTATAAC
CTCGATTGTT TGGGCAATGA AAAGACAGTC TGTCGGTGTG GAGCCTCCAA CTGTAGTGGG
TTCCTTGGAG ACAGACCAAA GACATCAACA TCCCTTTCTT CAGAGGAAAA GAGTAAAAAG
GCCAAGAAGA AAACCAGGAG GCGCAGAGCC AAGGGTGAAG GAAAGCGGCA GTCAGAGGAC
GAATGCTTCC GCTGTGGTGA TGGCGGACAA CTGGTGCTGT GTGACCGCAA GTTCTGCACC
AAGGCCTACC ACCTATCCTG CTTGGGCTTG GGCAAGCGGC CCTTTGGGAA GTGGGAATGT
CCTTGGCATC ACTGTGATGT GTGTGGCAAA CCTTCTACCT CATTTTGCCA CCTCTGCCCC
AACTCATTCT GTAAGGAACA CCAAGATGGG ACTGCTTTCC GCTCCACCCA GGATGGGCAA
TCCTACTGCT GTGAGCATGA CCTGAGGGCA GACTCTGCAA ATAATACCAA GACTGAGAAA
CCCTTTCTAG ACTCACTCAA GGCGAAGGGG AAGAGGAAGA AAAGGCGGTG CTGGCGAAGG
GTCACAGACG GCAAATAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ORa36340
Accession Version XM_006251379.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 1944bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 07-AUG-2014
Organism Rattus norvegicus (Norway rat)
Product histone-lysine N-methyltransferase NSD2 isoform X2
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_007905987.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced gi:564384623. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
ATGGAATTTA GCATCAGAAA AAGTCCTCTT TCTGTTCAGA AAGTTGTAAA GTGCATGAAG 
ATGAAGCAGG CACCAGAAAT CCTTGGCAGT GCAAATGGAA AGACTCAGAA CTGTGAAGTG
AATCACGAAT GTTCTGTATT CCTCAGCAAA GCTCAGCTTT CTAACAGCCT ACAGGAGGGG
GTCATGCAGA AATTTAACGG GCATGATGCA CTCCCCTTTC TTCCAGCAGA GAAGTTGAAA
GATCTTACTT CTTGTGTGTT TAATGGAGAA CCTGGTGCTC ATGATACTAA GTTGTGTTTT
GAGACCCAGG AAGTAAAAGG AATTGGGACA CCACCCAATA CTACTCCTAT CAAAAATGGC
TCTCCAGAAA TTAAACTGAA AATCACCAAA ACATACATGA ATGGGAAACC TCTCTTTGAA
TCTTCAATTT GTGGTGATGG CGCTGCTGAT ATGTCTCAGT CAGAAGAAAA TGGACAAAAA
TCGGATAATA AGACTAGGAG GAACAGGAAG AGGAGCATAA AATATGACTC TTTGCTGGAG
CAGGGCCTTG TGGAAGCAGC TTTAGTGTCC AAGATCTCAA GTCCTGAAGA TAAAAAGATT
CCAGTTAAGA AGGAGTCCTG TCCAAATAGT GGCAGAGACA GAGACCTCTT GTTAAAATAC
AACGTTGGTG ATTTGGTGTG GTCCAAAGTG TCAGGTTACC CTTGGTGGCC TTGCATGGTT
TCTGCTGATC CACTCCTTCA CAATCATACC AAACTTAAAG GTCAGAAAAA AAGTGCACGC
CAGTATCATG TACAATTCTT TGGTGATGCC CCAGAAAGAG CTTGGATATT TGAGAAGAGC
CTTGTTGCTT TTGAAGGAGA AGAACAATTT GAAAAATTAT GCCAAGAAAG TGCCAAGCAG
GCACCCACGA AAGCTGAGAA AATCAAGTTG TTGAAACCTA TTTCAGGGAG ATTGAGAGCC
CAGTGGGAAA TGGGCATTGT CCAGGCTGAG GAAGCTGCTA GCATGTCAGT AGAGGAGCGG
AAAGCCAAGT TTACTTTCCT TTATGTGGGG GACCAACTGC GCCTCAACCC TCAAGTGGCT
AAGGAGGCTG GCATTGCTAC AGAACCTTTG GGAGAAATGG TGGACTCTTC AGTGGCCAAT
GAAGAAGCTG CTGTAGACCC TGGGACTATG AGAGAAGAGG ACATTCCCGT AAAGAGAAGG
CGAAGAGCCA AAAGGTCTAG TTCTGCTGAG AACCAGGAAG GAGACCCCGG CACAGAAAAG
AGTACACCTC CAAAGATGGC GGATGCTGAA CCTAAGAGAG GCGTAGGTTC TCCTGCCGGG
AGGAAAAGGT CCACAGGATC TGCCTCACGG AGCAGAAAGG GAGACTCAGC AGCCCAGTTC
TTAGTCTTTT GTCAAAAACA CAGGGATGAG GTCGTAGCTG AACACCCAGA TGCCTCAGAG
GAGGAGATTG AAGAATTGCT TGGGTCCCAA TGGAGCATGC TCAATGAAAA GCAGAAAGCA
CGATATAATA CAAAGTTTTC CCTAATGATC TCTGCCCAGT CTGAAGAAGA CTCTGGAAAT
ACCAGTGGGA AAAAAAGGAC CCACACAAAA AGGACAGATG ACCCTCCTGA GGATGTGGAT
GTAGAAGACG CACCCAGGAA AAGACTTAGG ACAGATAAGC ACAGTCTTCG GAAGAGAGAG
ACAATCACCG ACAAAACGGC CAGAACGAGC TCGTACAAGG CTATAGAGGC AGCCTCCTCA
CTCAAGAGCC AGGCAGCAAC GAAAAATTTG TCTGATGCTT GCAAACCACT GAAGAAGCGA
AATCGGGCTT CTGCAACAGC GTCTTCAGCA CTTGGGTTTA ACAAAAGTTC ATCTCCTTCT
GCATCCTTAA CTGAGAATGA GCTTTTATGG GAGCCCACAT CAGTCAAGTT GGACTTGAAC
TCAGCCGCCC TGTACTGCAC TTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeqXP_006251441.1
CDS703..2646
Misc Feature(1)1354..1713(+)
Misc Feature(2)1390..1518(+)
Misc Feature(3)2080..>2217(+)
Misc Feature(4)2080..2175(+)
Translation
Position Chain Variation Link

Target ORF information:

RefSeq Version XM_006251379
Organism Rattus norvegicus (Norway rat)
Definition PREDICTED: Rattus norvegicus Wolf-Hirschhorn syndrome candidate 1 (Whsc1), transcript variant X10, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_006251379

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
ATGGAATTTA GCATCAGAAA AAGTCCTCTT TCTGTTCAGA AAGTTGTAAA GTGCATGAAG 
ATGAAGCAGG CACCAGAAAT CCTTGGCAGT GCAAATGGAA AGACTCAGAA CTGTGAAGTG
AATCACGAAT GTTCTGTATT CCTCAGCAAA GCTCAGCTTT CTAACAGCCT ACAGGAGGGG
GTCATGCAGA AATTTAACGG GCATGATGCA CTCCCCTTTC TTCCAGCAGA GAAGTTGAAA
GATCTTACTT CTTGTGTGTT TAATGGAGAA CCTGGTGCTC ATGATACTAA GTTGTGTTTT
GAGACCCAGG AAGTAAAAGG AATTGGGACA CCACCCAATA CTACTCCTAT CAAAAATGGC
TCTCCAGAAA TTAAACTGAA AATCACCAAA ACATACATGA ATGGGAAACC TCTCTTTGAA
TCTTCAATTT GTGGTGATGG CGCTGCTGAT ATGTCTCAGT CAGAAGAAAA TGGACAAAAA
TCGGATAATA AGACTAGGAG GAACAGGAAG AGGAGCATAA AATATGACTC TTTGCTGGAG
CAGGGCCTTG TGGAAGCAGC TTTAGTGTCC AAGATCTCAA GTCCTGAAGA TAAAAAGATT
CCAGTTAAGA AGGAGTCCTG TCCAAATAGT GGCAGAGACA GAGACCTCTT GTTAAAATAC
AACGTTGGTG ATTTGGTGTG GTCCAAAGTG TCAGGTTACC CTTGGTGGCC TTGCATGGTT
TCTGCTGATC CACTCCTTCA CAATCATACC AAACTTAAAG GTCAGAAAAA AAGTGCACGC
CAGTATCATG TACAATTCTT TGGTGATGCC CCAGAAAGAG CTTGGATATT TGAGAAGAGC
CTTGTTGCTT TTGAAGGAGA AGAACAATTT GAAAAATTAT GCCAAGAAAG TGCCAAGCAG
GCACCCACGA AAGCTGAGAA AATCAAGTTG TTGAAACCTA TTTCAGGGAG ATTGAGAGCC
CAGTGGGAAA TGGGCATTGT CCAGGCTGAG GAAGCTGCTA GCATGTCAGT AGAGGAGCGG
AAAGCCAAGT TTACTTTCCT TTATGTGGGG GACCAACTGC GCCTCAACCC TCAAGTGGCT
AAGGAGGCTG GCATTGCTAC AGAACCTTTG GGAGAAATGG TGGACTCTTC AGTGGCCAAT
GAAGAAGCTG CTGTAGACCC TGGGACTATG AGAGAAGAGG ACATTCCCGT AAAGAGAAGG
CGAAGAGCCA AAAGGTCTAG TTCTGCTGAG AACCAGGAAG GAGACCCCGG CACAGAAAAG
AGTACACCTC CAAAGATGGC GGATGCTGAA CCTAAGAGAG GCGTAGGTTC TCCTGCCGGG
AGGAAAAGGT CCACAGGATC TGCCTCACGG AGCAGAAAGG GAGACTCAGC AGCCCAGTTC
TTAGTCTTTT GTCAAAAACA CAGGGATGAG GTCGTAGCTG AACACCCAGA TGCCTCAGAG
GAGGAGATTG AAGAATTGCT TGGGTCCCAA TGGAGCATGC TCAATGAAAA GCAGAAAGCA
CGATATAATA CAAAGTTTTC CCTAATGATC TCTGCCCAGT CTGAAGAAGA CTCTGGAAAT
ACCAGTGGGA AAAAAAGGAC CCACACAAAA AGGACAGATG ACCCTCCTGA GGATGTGGAT
GTAGAAGACG CACCCAGGAA AAGACTTAGG ACAGATAAGC ACAGTCTTCG GAAGAGAGAG
ACAATCACCG ACAAAACGGC CAGAACGAGC TCGTACAAGG CTATAGAGGC AGCCTCCTCA
CTCAAGAGCC AGGCAGCAAC GAAAAATTTG TCTGATGCTT GCAAACCACT GAAGAAGCGA
AATCGGGCTT CTGCAACAGC GTCTTCAGCA CTTGGGTTTA ACAAAAGTTC ATCTCCTTCT
GCATCCTTAA CTGAGAATGA GCTTTTATGG GAGCCCACAT CAGTCAAGTT GGACTTGAAC
TCAGCCGCCC TGTACTGCAC TTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ORa06966
Accession Version NM_001191552.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 4041bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Structure linear
Update Date 04-SEP-2014
Organism Rattus norvegicus (Norway rat)
Product histone-lysine N-methyltransferase NSD2
Comment PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AC133613.3 and AABR07072416.1. On Jul 17, 2010 this sequence version replaced gi:293353235. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments.

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
ATGAAGCAGG CACCAGAAAT CCTTGGCAGT GCAAATGGAA AGACTCAGAA CTGTGAAGTG 
AATCACGAAT GTTCTGTATT CCTCAGCAAA GCTCAGCTTT CTAACAGCCT ACAGGAGGGG
GTCATGCAGA AATTTAACGG GCATGATGCA CTCCCCTTTC TTCCAGCAGA GAAGTTGAAA
GATCTTACTT CTTGTGTGTT TAATGGAGAA CCTGGTGCTC ATGATACTAA GTTGTGTTTT
GAGACCCAGG AAGTAAAAGG AATTGGGACA CCACCCAATA CTACTCCTAT CAAAAATGGC
TCTCCAGAAA TTAAACTGAA AATCACCAAA ACATACATGA ATGGGAAACC TCTCTTTGAA
TCTTCAATTT GTGGTGATGG CGCTGCTGAT ATGTCTCAGT CAGAAGAAAA TGGACAAAAA
TCGGATAATA AGACTAGGAG GAACAGGAAG AGGAGCATAA AATATGACTC TTTGCTGGAG
CAGGGCCTTG TGGAAGCAGC TTTAGTGTCC AAGATCTCAA GTCCTGAAGA TAAAAAGATT
CCAGTTAAGA AGGAGTCCTG TCCAAATAGT GGCAGAGACA GAGACCTCTT GTTAAAATAC
AACGTTGGTG ATTTGGTGTG GTCCAAAGTG TCAGGTTACC CTTGGTGGCC TTGCATGGTT
TCTGCTGATC CACTCCTTCA CAATCATACC AAACTTAAAG GTCAGAAAAA AAGTGCACGC
CAGTATCATG TACAATTCTT TGGTGATGCC CCAGAAAGAG CTTGGATATT TGAGAAGAGC
CTTGTTGCTT TTGAAGGAGA AGAACAATTT GAAAAATTAT GCCAAGAAAG TGCCAAGCAG
GCACCCACGA AAGCTGAGAA AATCAAGTTG TTGAAACCTA TTTCAGGGAG ATTGAGAGCC
CAGTGGGAAA TGGGCATTGT CCAGGCTGAG GAAGCTGCTA GCATGTCAGT AGAGGAGCGG
AAAGCCAAGT TTACTTTCCT TTATGTGGGG GACCAACTGC GCCTCAACCC TCAAGTGGCT
AAGGAGGCTG GCATTGCTAC AGAACCTTTG GGAGAAATGG TGGACTCTTC AGTGGCCAAT
GAAGAAGCTG CTGTAGACCC TGGGACTATG AGAGAAGAGG ACATTCCCGT AAAGAGAAGG
CGAAGAGCCA AAAGGTCTAG TTCTGCTGAG AACCAGGAAG GAGACCCCGG CACAGAAAAG
AGTACACCTC CAAAGATGGC GGATGCTGAA CCTAAGAGAG GCGTAGGTTC TCCTGCCGGG
AGGAAAAGGT CCACAGGATC TGCCTCACGG AGCAGAAAGG GAGACTCAGC AGCCCAGTTC
TTAGTCTTTT GTCAAAAACA CAGGGATGAG GTCGTAGCTG AACACCCAGA TGCCTCAGAG
GAGGAGATTG AAGAATTGCT TGGGTCCCAA TGGAGCATGC TCAATGAAAA GCAGAAAGCA
CGATATAATA CAAAGTTTTC CCTAATGATC TCTGCCCAGT CTGAAGAAGA CTCTGGAAAT
ACCAGTGGGA AAAAAAGGAC CCACACAAAA AGGACAGATG ACCCTCCTGA GGATGTGGAT
GTAGAAGACG CACCCAGGAA AAGACTTAGG ACAGATAAGC ACAGTCTTCG GAAGCAAAGA
GAGACAATCA CCGACAAAAC GGCCAGAACG AGCTCGTACA AGGCTATAGA GGCAGCCTCC
TCACTCAAGA GCCAGGCAGC AACGAAAAAT TTGTCTGATG CTTGCAAACC ACTGAAGAAG
CGAAATCGGG CTTCTGCAAC AGCGTCTTCA GCACTTGGGT TTAACAAAAG TTCATCTCCT
TCTGCATCCT TAACTGAGAA TGAGGTCTCA GACAACCCAG GAGATGAACC GTCAGAGTCT
CCGTATGAAA GTGCAGATGA AACACAGACT GAAGCGTCCG TCTCATCTAA GAAATCTGAA
AGAGGAATGG CTGCCAAAAA GGAGTACGTG TGTCAGCTGT GTGAGAAGAC AGGCAGTCTC
TTACTGTGTG AAGGCCCCTG TTGTGGAGCA TTCCACTTAG CCTGCCTTGG ACTTTCCCAG
AGACCAGAAG GAAGATTCAC CTGCACTGAA TGTGCCTCAG GGATTCACTC ATGCTTCGTA
TGTAAAGAAA GCAAGATGGA GGTGAAACGC TGTATGGTAA ACCAATGTGG AAAGTTTTAC
CATGAAGCCT GTGTGAAAAA ATACCCTCTC ACTGTGTTTG AGAGCCGAGG CTTTCGCTGT
CCTCTCCACA GCTGTATGAG CTGCCATGCC TCAAACCCTT CAAATCCGCG GCCATCAAAA
GGTAAAATGA TGCGGTGCGT CCGATGCCCT GTCGCCTATC ATGGCGGGGA TGCCTGCCTG
GCAGCGGGAT GTTCCGTGAT TGCTTCTAAC AGCATAATCT GCACAGGCCA CTTCACTGCC
CGCAAGGGGA AGCGGCACCA CACTCATGTC AATGTGAGCT GGTGCTTCGT GTGCTCCAAA
GGGGGAAGCC TTCTGTGCTG CGAGGCCTGT CCGGCAGCCT TCCACCCTGA TTGTTTGAGC
ATCGAGATGC CTGATGGCAG CTGGTTCTGC AATGACTGCC GAGCTGGGAA GAAGCTCCAC
TTTCAAGACA TCATTTGGGT CAAACTTGGG AACTACAGAT GGTGGCCAGC AGAAGTTTGC
CATCCCAAAA ATGTTCCCCC AAATATTCAG AAAATGAAGC ACGAGATTGG AGAATTCCCT
GTGTTTTTCT TCGGGTCTAA AGATTATTAC TGGACGCATC AGGCACGAGT GTTCCCATAC
ATGGAGGGGG ACCGGGGCAG CCGCTACCAG GGGGTCAGAG GGATTGGAAG AGTCTTCAAG
AACGCATTGC AAGAAGCCGA AGCTCGTTTT AATGAAATCA AACTTCAGCG GGAAGCCCGA
GAAACACAGG AGAGTGAGAG AAAGCCTCCA CCATACAAGC ATATCAAGGT GAATAAACCT
TATGGTAAAG TCCAGATCTA TACAGCTGAC ATTTCTGAAA TCCCAAAATG CAACTGTAAG
CCCACGGATG AGAACCCCTG TGGCTCTGAT TCAGAGTGTC TAAACAGGAT GCTAATGTTT
GAGTGCCACC CGCAGGTGTG CCCTGCAGGG GAATATTGCC AGAACCAGTG TTTCACTAAG
CGCCAGTACC CGGAGACCAA GATCATCAAG ACCGATGGCA AAGGGTGGGG CCTGGTTGCC
AAAAGGGACA TCAGAAAGGG AGAATTTGTT AATGAGTATG TTGGCGAACT GATTGATGAA
GAGGAGTGTA TGGCAAGAAT CAAATATGCA CATGAGAATG ACATCACTCA CTTTTACATG
CTCACCATAG ACAAGGACCG CATAATTGAT GCTGGCCCCA AAGGGAATTA CTCGCGGTTC
ATGAACCATA GCTGCCAGCC CAACTGTGAG ACCCTGAAGT GGACAGTGAA TGGGGACACA
CGGGTTGGCC TGTTTGCTGT GTGCGACATC CCTGCAGGTA CAGAGCTGAC TTTCAACTAT
AACCTCGATT GTTTGGGCAA TGAAAAGACA GTCTGTCGGT GTGGAGCCTC CAACTGTAGT
GGGTTCCTTG GAGACAGACC AAAGACATCA ACATCCCTTT CTTCAGAGGA AAAGAGTAAA
AAGGCCAAGA AGAAAACCAG GAGGCGCAGA GCCAAGGGTG AAGGAAAGCG GCAGTCAGAG
GACGAATGCT TCCGCTGTGG TGATGGCGGA CAACTGGTGC TGTGTGACCG CAAGTTCTGC
ACCAAGGCCT ACCACCTATC CTGCTTGGGC TTGGGCAAGC GGCCCTTTGG GAAGTGGGAA
TGTCCTTGGC ATCACTGTGA TGTGTGTGGC AAACCTTCTA CCTCATTTTG CCACCTCTGC
CCCAACTCAT TCTGTAAGGA ACACCAAGAT GGGACTGCTT TCCGCTCCAC CCAGGATGGG
CAATCCTACT GCTGTGAGCA TGACCTGAGG GCAGACTCTG CAAATAATAC CAAGACTGAG
AAACCCTTTC TAGACTCACT CAAGGCGAAG GGGAAGAGGA AGAAAAGGCG GTGCTGGCGA
AGGGTCACAG ACGGCAAATA G

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeqNP_001178481.1
CDS1..4041
Misc Feature(1)592..951(+)
Misc Feature(2)628..756(+)
Misc Feature(3)1318..>1455(+)
Misc Feature(4)1318..1413(+)
Misc Feature(5)1576..2073(+)
Misc Feature(6)1948..2076(+)
Misc Feature(7)1948..2058(+)
Misc Feature(8)1951..2073(+)
Misc Feature(9)2089..2229(+)
Misc Feature(10)2089..2214(+)
Misc Feature(11)2092..2229(+)
Misc Feature(12)2230..2391(+)
Misc Feature(13)2230..2376(+)
Misc Feature(14)2233..2391(+)
Misc Feature(15)2440..2562(+)
Misc Feature(16)2440..2544(+)
Misc Feature(17)2443..2559(+)
Misc Feature(18)2575..2859(+)
Misc Feature(19)2605..2724(+)
Misc Feature(20)2977..3129(+)
Misc Feature(21)3130..3501(+)
Misc Feature(22)3664..3792(+)
Misc Feature(23)3664..3777(+)
Misc Feature(24)3667..3792(+)
Translation
Position Chain Variation Link
3096 3096 c, t dbSNP:199252744
4100 4100 a, g dbSNP:197301482
4877 4877 a, g dbSNP:198637820

Target ORF information:

RefSeq Version NM_001191552
Organism Rattus norvegicus (Norway rat)
Definition Rattus norvegicus Wolf-Hirschhorn syndrome candidate 1 (Whsc1), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_001191552

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
ATGAAGCAGG CACCAGAAAT CCTTGGCAGT GCAAATGGAA AGACTCAGAA CTGTGAAGTG 
AATCACGAAT GTTCTGTATT CCTCAGCAAA GCTCAGCTTT CTAACAGCCT ACAGGAGGGG
GTCATGCAGA AATTTAACGG GCATGATGCA CTCCCCTTTC TTCCAGCAGA GAAGTTGAAA
GATCTTACTT CTTGTGTGTT TAATGGAGAA CCTGGTGCTC ATGATACTAA GTTGTGTTTT
GAGACCCAGG AAGTAAAAGG AATTGGGACA CCACCCAATA CTACTCCTAT CAAAAATGGC
TCTCCAGAAA TTAAACTGAA AATCACCAAA ACATACATGA ATGGGAAACC TCTCTTTGAA
TCTTCAATTT GTGGTGATGG CGCTGCTGAT ATGTCTCAGT CAGAAGAAAA TGGACAAAAA
TCGGATAATA AGACTAGGAG GAACAGGAAG AGGAGCATAA AATATGACTC TTTGCTGGAG
CAGGGCCTTG TGGAAGCAGC TTTAGTGTCC AAGATCTCAA GTCCTGAAGA TAAAAAGATT
CCAGTTAAGA AGGAGTCCTG TCCAAATAGT GGCAGAGACA GAGACCTCTT GTTAAAATAC
AACGTTGGTG ATTTGGTGTG GTCCAAAGTG TCAGGTTACC CTTGGTGGCC TTGCATGGTT
TCTGCTGATC CACTCCTTCA CAATCATACC AAACTTAAAG GTCAGAAAAA AAGTGCACGC
CAGTATCATG TACAATTCTT TGGTGATGCC CCAGAAAGAG CTTGGATATT TGAGAAGAGC
CTTGTTGCTT TTGAAGGAGA AGAACAATTT GAAAAATTAT GCCAAGAAAG TGCCAAGCAG
GCACCCACGA AAGCTGAGAA AATCAAGTTG TTGAAACCTA TTTCAGGGAG ATTGAGAGCC
CAGTGGGAAA TGGGCATTGT CCAGGCTGAG GAAGCTGCTA GCATGTCAGT AGAGGAGCGG
AAAGCCAAGT TTACTTTCCT TTATGTGGGG GACCAACTGC GCCTCAACCC TCAAGTGGCT
AAGGAGGCTG GCATTGCTAC AGAACCTTTG GGAGAAATGG TGGACTCTTC AGTGGCCAAT
GAAGAAGCTG CTGTAGACCC TGGGACTATG AGAGAAGAGG ACATTCCCGT AAAGAGAAGG
CGAAGAGCCA AAAGGTCTAG TTCTGCTGAG AACCAGGAAG GAGACCCCGG CACAGAAAAG
AGTACACCTC CAAAGATGGC GGATGCTGAA CCTAAGAGAG GCGTAGGTTC TCCTGCCGGG
AGGAAAAGGT CCACAGGATC TGCCTCACGG AGCAGAAAGG GAGACTCAGC AGCCCAGTTC
TTAGTCTTTT GTCAAAAACA CAGGGATGAG GTCGTAGCTG AACACCCAGA TGCCTCAGAG
GAGGAGATTG AAGAATTGCT TGGGTCCCAA TGGAGCATGC TCAATGAAAA GCAGAAAGCA
CGATATAATA CAAAGTTTTC CCTAATGATC TCTGCCCAGT CTGAAGAAGA CTCTGGAAAT
ACCAGTGGGA AAAAAAGGAC CCACACAAAA AGGACAGATG ACCCTCCTGA GGATGTGGAT
GTAGAAGACG CACCCAGGAA AAGACTTAGG ACAGATAAGC ACAGTCTTCG GAAGCAAAGA
GAGACAATCA CCGACAAAAC GGCCAGAACG AGCTCGTACA AGGCTATAGA GGCAGCCTCC
TCACTCAAGA GCCAGGCAGC AACGAAAAAT TTGTCTGATG CTTGCAAACC ACTGAAGAAG
CGAAATCGGG CTTCTGCAAC AGCGTCTTCA GCACTTGGGT TTAACAAAAG TTCATCTCCT
TCTGCATCCT TAACTGAGAA TGAGGTCTCA GACAACCCAG GAGATGAACC GTCAGAGTCT
CCGTATGAAA GTGCAGATGA AACACAGACT GAAGCGTCCG TCTCATCTAA GAAATCTGAA
AGAGGAATGG CTGCCAAAAA GGAGTACGTG TGTCAGCTGT GTGAGAAGAC AGGCAGTCTC
TTACTGTGTG AAGGCCCCTG TTGTGGAGCA TTCCACTTAG CCTGCCTTGG ACTTTCCCAG
AGACCAGAAG GAAGATTCAC CTGCACTGAA TGTGCCTCAG GGATTCACTC ATGCTTCGTA
TGTAAAGAAA GCAAGATGGA GGTGAAACGC TGTATGGTAA ACCAATGTGG AAAGTTTTAC
CATGAAGCCT GTGTGAAAAA ATACCCTCTC ACTGTGTTTG AGAGCCGAGG CTTTCGCTGT
CCTCTCCACA GCTGTATGAG CTGCCATGCC TCAAACCCTT CAAATCCGCG GCCATCAAAA
GGTAAAATGA TGCGGTGCGT CCGATGCCCT GTCGCCTATC ATGGCGGGGA TGCCTGCCTG
GCAGCGGGAT GTTCCGTGAT TGCTTCTAAC AGCATAATCT GCACAGGCCA CTTCACTGCC
CGCAAGGGGA AGCGGCACCA CACTCATGTC AATGTGAGCT GGTGCTTCGT GTGCTCCAAA
GGGGGAAGCC TTCTGTGCTG CGAGGCCTGT CCGGCAGCCT TCCACCCTGA TTGTTTGAGC
ATCGAGATGC CTGATGGCAG CTGGTTCTGC AATGACTGCC GAGCTGGGAA GAAGCTCCAC
TTTCAAGACA TCATTTGGGT CAAACTTGGG AACTACAGAT GGTGGCCAGC AGAAGTTTGC
CATCCCAAAA ATGTTCCCCC AAATATTCAG AAAATGAAGC ACGAGATTGG AGAATTCCCT
GTGTTTTTCT TCGGGTCTAA AGATTATTAC TGGACGCATC AGGCACGAGT GTTCCCATAC
ATGGAGGGGG ACCGGGGCAG CCGCTACCAG GGGGTCAGAG GGATTGGAAG AGTCTTCAAG
AACGCATTGC AAGAAGCCGA AGCTCGTTTT AATGAAATCA AACTTCAGCG GGAAGCCCGA
GAAACACAGG AGAGTGAGAG AAAGCCTCCA CCATACAAGC ATATCAAGGT GAATAAACCT
TATGGTAAAG TCCAGATCTA TACAGCTGAC ATTTCTGAAA TCCCAAAATG CAACTGTAAG
CCCACGGATG AGAACCCCTG TGGCTCTGAT TCAGAGTGTC TAAACAGGAT GCTAATGTTT
GAGTGCCACC CGCAGGTGTG CCCTGCAGGG GAATATTGCC AGAACCAGTG TTTCACTAAG
CGCCAGTACC CGGAGACCAA GATCATCAAG ACCGATGGCA AAGGGTGGGG CCTGGTTGCC
AAAAGGGACA TCAGAAAGGG AGAATTTGTT AATGAGTATG TTGGCGAACT GATTGATGAA
GAGGAGTGTA TGGCAAGAAT CAAATATGCA CATGAGAATG ACATCACTCA CTTTTACATG
CTCACCATAG ACAAGGACCG CATAATTGAT GCTGGCCCCA AAGGGAATTA CTCGCGGTTC
ATGAACCATA GCTGCCAGCC CAACTGTGAG ACCCTGAAGT GGACAGTGAA TGGGGACACA
CGGGTTGGCC TGTTTGCTGT GTGCGACATC CCTGCAGGTA CAGAGCTGAC TTTCAACTAT
AACCTCGATT GTTTGGGCAA TGAAAAGACA GTCTGTCGGT GTGGAGCCTC CAACTGTAGT
GGGTTCCTTG GAGACAGACC AAAGACATCA ACATCCCTTT CTTCAGAGGA AAAGAGTAAA
AAGGCCAAGA AGAAAACCAG GAGGCGCAGA GCCAAGGGTG AAGGAAAGCG GCAGTCAGAG
GACGAATGCT TCCGCTGTGG TGATGGCGGA CAACTGGTGC TGTGTGACCG CAAGTTCTGC
ACCAAGGCCT ACCACCTATC CTGCTTGGGC TTGGGCAAGC GGCCCTTTGG GAAGTGGGAA
TGTCCTTGGC ATCACTGTGA TGTGTGTGGC AAACCTTCTA CCTCATTTTG CCACCTCTGC
CCCAACTCAT TCTGTAAGGA ACACCAAGAT GGGACTGCTT TCCGCTCCAC CCAGGATGGG
CAATCCTACT GCTGTGAGCA TGACCTGAGG GCAGACTCTG CAAATAATAC CAAGACTGAG
AAACCCTTTC TAGACTCACT CAAGGCGAAG GGGAAGAGGA AGAAAAGGCG GTGCTGGCGA
AGGGTCACAG ACGGCAAATA G

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

 
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