| Name | Freq | Positions |
|---|
| AatII | 5 | 371, 424, 507, 693, 5769 |
| AccI | 3 | 3580, 3587, 5772 |
| AceIII | 3 | 3901, 5138, 2042 |
| AciI | 70 | 61, 308, 336, 348, 362, 529, 757, 979, 1332, 1701, 1728, 2248, 2260, 2269, 2281, 2291, 2302, 2348, 2519, 2582, 3084, 3129, 3195, 3221, 3346, 3349, 3651, 3754, 3844, 4006, 4034, 4161, 4180, 4301, 4546, 4914, 5005, 5242, 5407, 5484, 5593, 5739, 620, 653, 778, 975, 1272, 1583, 1607, 1656, 1670, 1673, 2676, 2740, 2841, 2844, 3124, 3179, 3277, 3415, 3810, 3820, 3887, 3894, 3915, 4411, 4555, 5196, 5363, 5692 |
| AclI | 2 | 5076, 5449 |
| AcyI | 9 | 371, 424, 507, 693, 2609, 3311, 3390, 5387, 5769 |
| AflII | 1 | 908 |
| AflIII | 2 | 228, 3961 |
| AhaIII | 4 | 902, 4715, 4734, 5426 |
| AlfI | 2 | 2129, 2201 |
| AloI | 2 | 1530, 1921 |
| AluI | 30 | 134, 815, 890, 912, 1010, 1065, 1292, 1409, 1619, 1786, 2043, 2363, 2417, 2427, 2715, 3173, 3464, 3597, 3603, 3625, 3720, 3784, 3902, 4128, 4218, 4264, 4521, 5039, 5139, 5202 |
| AlwNI | 2 | 75, 4372 |
| ApaI | 1 | 1031 |
| ApaBI | 2 | 2139, 2211 |
| ApaLI | 3 | 32, 4275, 5518 |
| ApoI | 3 | 127, 2057, 3500 |
| AsuI | 13 | 217, 333, 526, 1031, 1032, 1117, 1266, 1880, 3126, 4893, 4972, 4989, 5211 |
| AsuII | 1 | 3291 |
| AvaI | 2 | 1370, 2421 |
| AvaII | 8 | 3126, 4989, 5211, 333, 526, 1032, 1117, 4893 |
| AvrII | 1 | 2400 |
| BalI | 2 | 1452, 2690 |
| BamHI | 1 | 1000 |
| BbvI | 19 | 1692, 2671, 2713, 3234, 3462, 4368, 4371, 4574, 5268, 200, 939, 2570, 2754, 2847, 3785, 3866, 3884, 4303, 4902 |
| BbvII | 1 | 1556 |
| BbvCI | 1 | 1361 |
| BccI | 10 | 1883, 2264, 2822, 3324, 4887, 5011, 5298, 1865, 2494, 2922 |
| Bce83I | 6 | 982, 4329, 3001, 4067, 4603, 5471 |
| BcefI | 4 | 1831, 3020, 4447, 2584 |
| BcgI | 2 | 1350, 5367 |
| BciVI | 4 | 1636, 2818, 4170, 5694 |
| BclI | 2 | 1072, 2451 |
| BetI | 6 | 2641, 4167, 4314, 5142, 4931, 5384 |
| BfiI | 5 | 2549, 544, 1102, 2284, 4896 |
| BglI | 4 | 334, 456, 527, 4965 |
| BglII | 1 | 12 |
| BinI | 10 | 4, 1000, 2446, 2470, 2781, 3027, 3419, 4599, 4696, 5476 |
| BplI | 2 | 2344, 3275 |
| Bpu10I | 2 | 1361, 179 |
| BsaAI | 3 | 588, 1872, 2912 |
| BsaBI | 1 | 2465 |
| BsaXI | 3 | 1532, 1921, 3814 |
| BseMII | 12 | 39, 1362, 1406, 1479, 4236, 4642, 4808, 109, 1602, 2360, 3273, 5348 |
| BsePI | 1 | 3007 |
| BseRI | 1 | 2381 |
| BseSI | 7 | 32, 1031, 1139, 2552, 2645, 4275, 5518 |
| BseYI | 8 | 1007, 2121, 2193, 1513, 1574, 1620, 3114, 4265 |
| BsgI | 1 | 1299 |
| BsiI | 4 | 3328, 3202, 4134, 5515 |
| BsiYI | 14 | 293, 1114, 1332, 1649, 1975, 2302, 2585, 3129, 3410, 3803, 3977, 3995, 4161, 4440 |
| BsmI | 1 | 3530 |
| BsmAI | 7 | 679, 1463, 5683, 882, 1432, 2458, 4918 |
| Bsp24I | 5 | 516, 884, 3390, 4638, 5763 |
| Bsp1407I | 2 | 924, 1018 |
| BspHI | 2 | 4678, 5686 |
| BspLU11I | 1 | 3961 |
| BspMI | 3 | 2869, 3319, 2506 |
| BsrI | 18 | 847, 1958, 2549, 2750, 4364, 4377, 5322, 74, 545, 1103, 1136, 2285, 3761, 4494, 4897, 5015, 5058, 5497 |
| BsrBI | 6 | 1728, 3221, 3651, 3275, 3892, 5690 |
| BsrDI | 3 | 2836, 4905, 5087 |
| BstXI | 1 | 1506 |
| BtgZI | 6 | 208, 3047, 599, 1884, 2896, 3240 |
| BtsI | 8 | 1301, 5244, 839, 1321, 1534, 3526, 3748, 5272 |
| Cac8I | 37 | 120, 334, 527, 891, 895, 935, 987, 1066, 1268, 1391, 1566, 1570, 1712, 1726, 1769, 2125, 2144, 2197, 2216, 2502, 2688, 2907, 2973, 2979, 3007, 3011, 3052, 3056, 3110, 3393, 3752, 3781, 3890, 3976, 4013, 4570, 4961 |
| CauII | 8 | 2421, 2422, 2613, 2773, 3386, 4340, 5033, 5384 |
| CdiI | 10 | 599, 1884, 2896, 2901, 3099, 3240, 5099, 209, 3048, 5503 |
| CfrI | 8 | 976, 1452, 2516, 2690, 3081, 3108, 3800, 5239 |
| Cfr10I | 5 | 1769, 2929, 3110, 3393, 4931 |
| CjeI | 13 | 2370, 3988, 4543, 5763, 324, 517, 885, 1491, 2167, 3391, 4464, 4542, 4639 |
| CjePI | 12 | 1103, 4494, 5763, 21, 516, 884, 1073, 1286, 3390, 4638, 4758, 5230 |
| CspCI | 2 | 638, 1143 |
| CstMI | 2 | 1731, 5204 |
| CviJI | 112 | 72, 134, 150, 218, 291, 333, 342, 526, 815, 823, 850, 890, 894, 912, 938, 977, 1010, 1032, 1065, 1117, 1148, 1267, 1292, 1317, 1365, 1404, 1409, 1453, 1458, 1500, 1589, 1597, 1619, 1625, 1772, 1786, 1800, 1881, 2023, 2043, 2116, 2188, 2311, 2340, 2346, 2363, 2386, 2398, 2404, 2417, 2427, 2517, 2534, 2542, 2569, 2594, 2678, 2687, 2691, 2715, 2753, 2829, 2846, 2865, 2928, 2972, 2982, 2999, 3082, 3109, 3113, 3150, 3173, 3189, 3369, 3396, 3464, 3597, 3603, 3625, 3677, 3698, 3720, 3784, 3801, 3883, 3902, 3975, 3986, 4004, 4030, 4128, 4218, 4264, 4269, 4294, 4373, 4438, 4449, 4492, 4521, 4881, 4893, 4934, 4960, 4964, 4973, 5039, 5129, 5139, 5202, 5240 |
| CviRI | 27 | 33, 165, 990, 1172, 1300, 1324, 1394, 2138, 2147, 2210, 2219, 2334, 2410, 2501, 2660, 2835, 2849, 3461, 3529, 3787, 4276, 4569, 4904, 4994, 5187, 5275, 5519 |
| DdeI | 13 | 39, 109, 180, 1362, 1406, 1479, 1602, 2360, 3273, 4236, 4642, 4808, 5348 |
| DpnI | 29 | 5, 13, 21, 1001, 1073, 1486, 2447, 2452, 2471, 2782, 2860, 2941, 2950, 3028, 3404, 3420, 4528, 4600, 4611, 4619, 4697, 4709, 4814, 5155, 5173, 5219, 5477, 5494, 5530 |
| DraII | 2 | 1031, 1265 |
| DraIII | 1 | 1872 |
| DrdI | 3 | 1915, 2631, 4063 |
| DsaI | 4 | 610, 946, 2307, 3042 |
| Eam1105I | 2 | 1187, 4846 |
| EciI | 11 | 1606, 3123, 756, 1331, 2259, 2280, 2290, 2301, 4033, 4179, 5004 |
| Eco31I | 3 | 1462, 882, 4918 |
| Eco57I | 4 | 2735, 3167, 4488, 5533 |
| Eco57MI | 9 | 1294, 2735, 3167, 3429, 4488, 1134, 3408, 4936, 5533 |
| EcoRII | 20 | 339, 532, 1114, 1120, 1338, 1387, 1401, 1455, 2113, 2168, 2185, 2996, 3700, 3988, 4109, 4122, 2421, 2613, 4340, 5384 |
| EspI | 1 | 1405 |
| Esp3I | 1 | 1432 |
| FalI | 1 | 2927 |
| FauI | 13 | 335, 361, 528, 1727, 2247, 2268, 3753, 1272, 1673, 2740, 3277, 3415, 3810 |
| FnuDII | 19 | 119, 207, 229, 309, 1645, 1669, 1689, 2065, 2675, 2976, 3008, 3414, 3807, 3809, 4007, 4585, 4915, 5408, 5740 |
| Fnu4HI | 40 | 60, 200, 939, 975, 978, 1656, 1670, 1692, 2347, 2518, 2570, 2581, 2671, 2676, 2713, 2754, 2841, 2844, 2847, 3083, 3179, 3220, 3234, 3348, 3462, 3785, 3866, 3884, 3887, 4005, 4160, 4303, 4368, 4371, 4574, 4902, 5241, 5268, 5363, 5592 |
| FokI | 12 | 959, 1251, 1579, 2464, 2921, 2946, 3400, 1085, 2265, 4831, 5012, 5299 |
| GdiII | 6 | 976, 2516, 3800, 3081, 3108, 5239 |
| GsuI | 5 | 1294, 3429, 1134, 3408, 4936 |
| HaeI | 8 | 1452, 1499, 2397, 2690, 3974, 3985, 4437, 3800 |
| HaeII | 5 | 1715, 1723, 2609, 3835, 4205 |
| HaeIII | 26 | 218, 333, 526, 977, 1032, 1117, 1267, 1453, 1500, 1881, 2023, 2340, 2346, 2398, 2517, 2691, 3082, 3109, 3801, 3975, 3986, 4004, 4438, 4893, 4973, 5240 |
| HaeIV | 3 | 1187, 2782, 4846 |
| HgaI | 6 | 767, 3311, 3390, 4063, 4638, 5388 |
| HgiAI | 13 | 32, 814, 1064, 2719, 2909, 4275, 5433, 5518, 1646, 1716, 1724, 2610, 5741 |
| HgiCI | 6 | 715, 1833, 2609, 2644, 3705, 4799 |
| HgiJII | 7 | 814, 1031, 1064, 1588, 1624, 1799, 2971 |
| HhaI | 30 | 118, 198, 1646, 1659, 1668, 1690, 1716, 1724, 2602, 2610, 2674, 2711, 2977, 3007, 3009, 3237, 3413, 3743, 3808, 3836, 3869, 4139, 4206, 4306, 4480, 4586, 4979, 5072, 5409, 5741 |
| Hin4I | 6 | 1187, 2782, 4846, 4920, 985, 2812 |
| HindII | 3 | 232, 3587, 5772 |
| HindIII | 1 | 911 |
| HinfI | 17 | 173, 660, 869, 1351, 1383, 1922, 1944, 3095, 3229, 3281, 3339, 3376, 3796, 3861, 3936, 4332, 4846 |
| HpaII | 22 | 1770, 2422, 2515, 2592, 2614, 2642, 2773, 2863, 2930, 3111, 3386, 3394, 3679, 4168, 4315, 4341, 4531, 4932, 4966, 5033, 5143, 5385 |
| HphI | 11 | 614, 1483, 1862, 5325, 5566, 1049, 1443, 2796, 4702, 4929, 5551 |
| Hpy99I | 17 | 965, 2696, 2724, 3018, 3033, 3310, 3586, 4062, 4853, 5116, 5771, 5774, 1768, 2583, 3219, 3347, 3392 |
| Hpy178III | 25 | 7, 17, 206, 994, 1369, 2369, 2454, 2627, 2943, 2952, 3035, 3091, 3135, 3225, 3258, 3327, 3765, 4194, 4328, 4426, 4524, 4604, 4678, 4937, 5686 |
| Hpy188I | 19 | 54, 1184, 1601, 1815, 2359, 2444, 2449, 2575, 2919, 3272, 3373, 4073, 4151, 4504, 4635, 4770, 5216, 5227, 5347 |
| Ksp632I | 4 | 3839, 5640, 2959, 3169 |
| MaeI | 15 | 250, 829, 896, 995, 1061, 1189, 1629, 1721, 2401, 3535, 3595, 3599, 4456, 4706, 5041 |
| MaeII | 16 | 372, 384, 425, 508, 589, 694, 1763, 1873, 1916, 1928, 2726, 2913, 4661, 5077, 5450, 5770 |
| MaeIII | 18 | 312, 399, 748, 1048, 1092, 1685, 1697, 2731, 3037, 3475, 4318, 4381, 4497, 4777, 5108, 5166, 5319, 5507 |
| MboI | 29 | 5, 13, 21, 1001, 1073, 1486, 2447, 2452, 2471, 2782, 2860, 2941, 2950, 3028, 3404, 3420, 4528, 4600, 4611, 4619, 4697, 4709, 4814, 5155, 5173, 5219, 5477, 5494, 5530 |
| MboII | 14 | 170, 1556, 2959, 3169, 4459, 4608, 1743, 3269, 3436, 3840, 4699, 5454, 5532, 5641 |
| McrI | 6 | 976, 2516, 3874, 4298, 5218, 5367 |
| MfeI | 1 | 161 |
| MluI | 1 | 228 |
| MmeI | 5 | 1466, 4151, 4335, 98, 1918 |
| MnlI | 35 | 1098, 1109, 1335, 1361, 1367, 1502, 1837, 2351, 2357, 3201, 3407, 3592, 3850, 4133, 5008, 5214, 102, 798, 998, 1219, 1604, 2338, 2344, 2381, 2384, 2396, 2468, 2532, 2668, 3025, 3817, 4076, 4400, 4797, 4878 |
| MseI | 23 | 69, 131, 257, 862, 903, 909, 1166, 1664, 1935, 2033, 2050, 2061, 2071, 3732, 3791, 4664, 4716, 4721, 4735, 4788, 5023, 5062, 5427 |
| MslI | 7 | 611, 1085, 1132, 3043, 5099, 5258, 5617 |
| MstI | 2 | 2710, 5071 |
| MwoI | 37 | 191, 334, 456, 488, 527, 620, 644, 978, 1325, 1574, 1598, 1659, 1661, 1703, 1730, 1760, 2139, 2211, 2262, 2341, 2347, 2595, 2679, 2702, 2841, 2847, 2964, 3000, 3047, 3314, 3699, 3743, 3827, 3894, 4008, 4577, 4965 |
| NaeI | 3 | 1769, 3110, 3393 |
| NarI | 1 | 2609 |
| NcoI | 4 | 610, 946, 2307, 3042 |
| NdeI | 1 | 483 |
| NheI | 1 | 895 |
| NlaIII | 26 | 167, 551, 611, 947, 988, 1392, 1396, 1571, 2145, 2217, 2308, 2481, 2826, 3012, 3043, 3069, 3425, 3573, 3616, 3962, 4679, 5170, 5180, 5258, 5294, 5687 |
| NlaIV | 19 | 715, 1000, 1031, 1285, 1800, 1812, 1833, 2116, 2188, 2609, 2644, 3705, 3991, 4030, 4799, 4893, 4934, 5145, 5735 |
| NotI | 1 | 975 |
| NruI | 1 | 206 |
| NspI | 7 | 987, 1391, 1570, 2144, 2216, 3011, 3961 |
| NspBII | 6 | 1618, 2714, 3783, 4301, 4546, 5484 |
| OliI | 1 | 1132 |
| PfoI | 1 | 3385 |
| PleI | 8 | 1922, 4332, 660, 869, 1944, 3281, 3861, 4846 |
| PmeI | 1 | 901 |
| PpiI | 4 | 1530, 4649, 1922, 5492 |
| PpuMI | 1 | 1031 |
| PsiI | 2 | 2000, 3467 |
| PstI | 1 | 2659 |
| PvuI | 1 | 5218 |
| PvuII | 3 | 1618, 2714, 3783 |
| RsaI | 12 | 43, 213, 468, 493, 548, 581, 632, 789, 925, 1019, 2915, 5330 |
| RsrII | 1 | 3125 |
| SacI | 2 | 814, 1064 |
| SalI | 2 | 3587, 5772 |
| SapI | 3 | 3838, 2959, 3169 |
| ScaI | 1 | 5329 |
| ScrFI | 24 | 339, 532, 1114, 1120, 1338, 1387, 1401, 1455, 2113, 2168, 2185, 2421, 2422, 2613, 2773, 2996, 3386, 3700, 3988, 4109, 4122, 4340, 5033, 5384 |
| SduI | 16 | 32, 814, 1031, 1064, 1139, 1588, 1624, 1799, 2552, 2645, 2719, 2909, 2971, 4275, 5433, 5518 |
| SecI | 15 | 610, 946, 1119, 1338, 1496, 2112, 2184, 2307, 2342, 2400, 2421, 2773, 3042, 3700, 4121 |
| SexAI | 2 | 2167, 4339 |
| SfaNI | 19 | 991, 1084, 1173, 2148, 2220, 2900, 2964, 3239, 3493, 4049, 5098, 5538, 57, 617, 1580, 2578, 2833, 3049, 5308 |
| SfeI | 8 | 875, 1041, 1261, 1651, 2659, 4226, 4417, 5092 |
| SimI | 10 | 276, 1275, 4632, 357, 884, 1094, 1841, 3039, 4154, 4920 |
| SmaI | 1 | 2421 |
| SmlI | 7 | 908, 982, 3001, 4067, 4329, 4603, 5471 |
| SnaBI | 1 | 588 |
| SpeI | 1 | 249 |
| SphI | 6 | 987, 1391, 1570, 2144, 2216, 3011 |
| SspI | 2 | 1205, 5653 |
| Sth132I | 46 | 18, 335, 361, 528, 1370, 1727, 1779, 2247, 2268, 2421, 2613, 3016, 3155, 3226, 3753, 4088, 4287, 4296, 4340, 4851, 5384, 5752, 216, 274, 666, 729, 1078, 1273, 1436, 1674, 1796, 2423, 2699, 2741, 2774, 3278, 3387, 3416, 3766, 3811, 4195, 4630, 4875, 5034, 5397, 5458 |
| StuI | 1 | 2397 |
| StyI | 8 | 610, 946, 1496, 2307, 2400, 3042, 2112, 2184 |
| TaqI | 13 | 856, 1839, 2723, 2879, 2903, 2939, 3101, 3292, 3337, 3588, 4061, 5502, 5773 |
| TatI | 8 | 42, 467, 547, 580, 631, 924, 1018, 5329 |
| TauI | 21 | 60, 975, 978, 1656, 1670, 2347, 2518, 2581, 2676, 2841, 2844, 3083, 3179, 3220, 3348, 3887, 4005, 4160, 5241, 5363, 5592 |
| TfiI | 15 | 173, 1351, 1383, 3095, 3229, 3339, 3376, 3796, 3936, 660, 869, 1944, 3281, 3861, 4846 |
| TseI | 31 | 200, 939, 1692, 2570, 2671, 2713, 2754, 2847, 3234, 3462, 3785, 3866, 3884, 4303, 4368, 4371, 4574, 4902, 5268, 60, 978, 2347, 2518, 2581, 3083, 3220, 3348, 4005, 4160, 5241, 5592 |
| Tsp45I | 7 | 1048, 1092, 1697, 2731, 3037, 5108, 5319 |
| Tsp4CI | 14 | 324, 446, 517, 791, 1898, 2988, 3104, 3212, 3584, 3923, 3994, 4464, 4774, 5289 |
| TspDTI | 9 | 168, 2654, 3358, 3794, 4727, 286, 3097, 4829, 5132 |
| TspEI | 20 | 128, 162, 269, 860, 1164, 1413, 1509, 2058, 2069, 2073, 2155, 2227, 2319, 3501, 3642, 3659, 3734, 4719, 5025, 5280 |
| TspGWI | 2 | 2, 5618 |
| TspRI | 34 | 839, 1104, 1137, 1302, 1321, 1534, 2733, 3526, 3748, 3857, 4363, 4376, 4644, 4793, 4898, 5245, 5272, 837, 1102, 1135, 1300, 1319, 1532, 2731, 3524, 3746, 3855, 4361, 4374, 4642, 4791, 4896, 5243, 5270 |
| Tth111I | 1 | 2725 |
| Tth111II | 5 | 4535, 4571, 89, 3055, 4565 |
| VspI | 6 | 256, 861, 2070, 3731, 3790, 5022 |
| XbaI | 1 | 994 |
| XhoII | 12 | 12, 1000, 2446, 2781, 3027, 3419, 4599, 4610, 4696, 4708, 5476, 5493 |
| XmaIII | 2 | 976, 2516 |
| XmnI | 2 | 2068, 5446 |