| Name | Freq | Positions |
|---|
| AatII | 2 | 1241, 4692 |
| AccI | 3 | 2503, 2510, 4695 |
| AceIII | 5 | 1296, 2824, 4061, 796, 1755 |
| AciI | 65 | 111, 455, 482, 1002, 1014, 1023, 1035, 1045, 1056, 1102, 1237, 1426, 1493, 1543, 1629, 1844, 1995, 2018, 2147, 2269, 2272, 2574, 2677, 2767, 2929, 2957, 3084, 3103, 3224, 3469, 3837, 3928, 4165, 4330, 4407, 4516, 4662, 4758, 5046, 75, 337, 361, 410, 424, 427, 1361, 1563, 1587, 1609, 1806, 1854, 1967, 1997, 2157, 2338, 2733, 2743, 2810, 2817, 2838, 3334, 3478, 4119, 4286, 4615 |
| AclI | 2 | 3999, 4372 |
| AcyI | 5 | 1241, 2209, 2313, 4310, 4692 |
| AflII | 1 | 99 |
| AflIII | 2 | 2884, 4925 |
| AhaIII | 6 | 105, 3638, 3657, 4349, 5230, 5243 |
| AlfI | 2 | 883, 955 |
| AloI | 1 | 675 |
| AluI | 30 | 85, 97, 373, 540, 797, 1117, 1171, 1181, 1297, 1329, 1371, 1756, 1981, 2046, 2075, 2387, 2520, 2526, 2548, 2643, 2707, 2825, 3051, 3141, 3187, 3444, 3962, 4062, 4125, 4831 |
| AlwNI | 2 | 3295, 4772 |
| ApaBI | 4 | 893, 965, 1517, 1793 |
| ApaLI | 5 | 1498, 1800, 3198, 4441, 4729 |
| ApoI | 5 | 811, 1461, 2423, 4824, 4992 |
| AsuI | 11 | 634, 1617, 1626, 1768, 2167, 3816, 3895, 3912, 4134, 4914, 5083 |
| AvaI | 1 | 1175 |
| AvaII | 6 | 1626, 2167, 3912, 4134, 1617, 3816 |
| AvrII | 1 | 1154 |
| BalI | 1 | 767 |
| BamHI | 1 | 78 |
| BbvI | 18 | 446, 1295, 1553, 1946, 2073, 2385, 3291, 3294, 3497, 4191, 1372, 1584, 2708, 2789, 2807, 3226, 3825, 4897 |
| BbvII | 1 | 310 |
| BccI | 10 | 148, 637, 1018, 3810, 3934, 4221, 619, 1380, 1712, 2172 |
| Bce83I | 4 | 3252, 2990, 3526, 4394 |
| BcefI | 6 | 585, 2056, 3370, 1495, 1925, 2160 |
| BcgI | 1 | 4290 |
| BciVI | 3 | 390, 3093, 4617 |
| BclI | 2 | 115, 1205 |
| BetI | 8 | 1439, 1976, 2112, 3090, 3237, 4065, 3854, 4307 |
| BfiI | 3 | 1038, 3819, 4998 |
| BglI | 2 | 769, 3888 |
| BglII | 1 | 4709 |
| BinI | 18 | 78, 1200, 1989, 2342, 3522, 3619, 4399, 4701, 79, 1683, 2110, 2327, 3451, 3534, 3632, 4096, 4417, 4718 |
| BplI | 1 | 1098 |
| Bpu10I | 1 | 4876 |
| BsaAI | 5 | 626, 1212, 2244, 5029, 5188 |
| BsaXI | 3 | 1276, 675, 2737 |
| BseMII | 9 | 3159, 3565, 3731, 4736, 247, 356, 1114, 4271, 4806 |
| BsePI | 3 | 5048, 5057, 5059 |
| BseRI | 2 | 1135, 4980 |
| BseSI | 5 | 1498, 1800, 3198, 4441, 4729 |
| BseYI | 6 | 875, 947, 2214, 328, 374, 3188 |
| BsiI | 4 | 1318, 1797, 3057, 4438 |
| BsiYI | 16 | 403, 729, 1056, 1433, 1496, 1783, 1892, 2113, 2333, 2726, 2900, 2918, 3084, 3363, 5028, 5064 |
| BsmI | 1 | 2453 |
| BsmAI | 3 | 1281, 4606, 3841 |
| Bsp24I | 5 | 1832, 2313, 3561, 2215, 4686 |
| BspHI | 2 | 3601, 4609 |
| BspLU11I | 1 | 2884 |
| BspMI | 1 | 1522 |
| BspMII | 3 | 1439, 1976, 2112 |
| BsrI | 15 | 712, 1699, 1864, 3287, 3300, 4245, 1039, 2684, 3417, 3820, 3938, 3981, 4420, 4771, 4999 |
| BsrBI | 6 | 482, 2574, 1607, 1965, 2815, 4613 |
| BsrDI | 2 | 3828, 4010 |
| BtgZI | 4 | 1875, 4905, 236, 638 |
| BtsI | 4 | 4167, 2449, 2671, 4195 |
| Cac8I | 28 | 143, 320, 324, 466, 480, 523, 879, 898, 951, 970, 1541, 1742, 1802, 1982, 2145, 2316, 2675, 2704, 2813, 2899, 2936, 3493, 3884, 4817, 5014, 5048, 5057, 5059 |
| CauII | 8 | 1175, 1176, 2003, 2119, 2309, 3263, 3956, 4307 |
| CdiI | 13 | 236, 638, 1420, 4022, 1334, 1379, 1751, 1876, 2066, 2091, 2171, 4426, 4906 |
| CfrI | 7 | 767, 1423, 1588, 1841, 2158, 2723, 4162 |
| Cfr10I | 4 | 523, 1556, 2316, 3854 |
| CjeI | 13 | 148, 1124, 2215, 2911, 3466, 4686, 921, 1648, 1833, 2314, 3387, 3465, 3562 |
| CjePI | 10 | 2215, 3417, 4686, 1832, 2070, 2313, 3561, 3681, 4153, 4718 |
| CstMI | 2 | 485, 4127 |
| CviJI | 95 | 85, 97, 120, 146, 343, 351, 373, 379, 526, 540, 554, 635, 768, 777, 797, 870, 942, 1065, 1094, 1100, 1117, 1140, 1152, 1158, 1171, 1181, 1225, 1297, 1329, 1371, 1424, 1473, 1555, 1568, 1589, 1599, 1617, 1745, 1756, 1769, 1815, 1842, 1924, 1934, 1981, 1999, 2046, 2075, 2117, 2159, 2175, 2292, 2319, 2387, 2520, 2526, 2548, 2600, 2621, 2643, 2707, 2724, 2806, 2825, 2898, 2909, 2927, 2953, 3051, 3141, 3187, 3192, 3217, 3296, 3361, 3372, 3415, 3444, 3804, 3816, 3857, 3883, 3887, 3896, 3962, 4052, 4062, 4125, 4163, 4769, 4831, 4847, 4915, 5084, 5128 |
| CviRI | 30 | 234, 892, 901, 964, 973, 1088, 1164, 1294, 1418, 1485, 1499, 1516, 1552, 1801, 1985, 2072, 2384, 2452, 2710, 3199, 3492, 3827, 3917, 4110, 4198, 4442, 4730, 4862, 5112, 5224 |
| DdeI | 11 | 247, 356, 1114, 1596, 3159, 3565, 3731, 4271, 4736, 4806, 4877 |
| DpnI | 29 | 79, 116, 1201, 1206, 1262, 1395, 1580, 1593, 1683, 1990, 2110, 2327, 2343, 3451, 3523, 3534, 3542, 3620, 3632, 3737, 4078, 4096, 4142, 4400, 4417, 4453, 4702, 4710, 4718 |
| DraII | 1 | 5082 |
| DraIII | 4 | 626, 1501, 1794, 5026 |
| DrdI | 4 | 669, 1716, 2097, 2986 |
| DsaI | 4 | 1061, 1570, 1926, 1995 |
| Eam1105I | 1 | 3769 |
| EciI | 8 | 360, 1013, 1034, 1044, 1055, 2956, 3102, 3927 |
| Eco31I | 1 | 3841 |
| Eco57I | 2 | 3411, 4456 |
| Eco57MI | 7 | 1865, 1919, 2352, 3411, 2331, 3859, 4456 |
| EcoRI | 2 | 1461, 4992 |
| EcoRII | 11 | 186, 867, 922, 939, 2623, 2911, 3032, 3045, 1175, 3263, 4307 |
| Esp3I | 1 | 1280 |
| FauI | 13 | 481, 1001, 1022, 1492, 1542, 2146, 2676, 75, 427, 1361, 1609, 2338, 2733 |
| FnuDII | 30 | 74, 399, 423, 443, 819, 1238, 1427, 1562, 1673, 1739, 1805, 1954, 1996, 2156, 2337, 2730, 2732, 2930, 3508, 3838, 4331, 4663, 4816, 4904, 4926, 5011, 5047, 5049, 5058, 5060 |
| Fnu4HI | 35 | 410, 424, 446, 1101, 1295, 1372, 1425, 1553, 1584, 1587, 1843, 1946, 1994, 1997, 2073, 2157, 2271, 2385, 2708, 2789, 2807, 2810, 2928, 3083, 3226, 3291, 3294, 3497, 3825, 4164, 4191, 4286, 4515, 4757, 4897 |
| FokI | 8 | 333, 1574, 2323, 1019, 1974, 3754, 3935, 4222 |
| GdiII | 6 | 1423, 1588, 2158, 2723, 1841, 4162 |
| GsuI | 5 | 1865, 1919, 2352, 2331, 3859 |
| HaeI | 8 | 767, 1151, 1567, 2897, 2908, 3360, 1616, 2723 |
| HaeII | 4 | 469, 477, 2758, 3128 |
| HaeIII | 24 | 635, 768, 777, 1094, 1100, 1152, 1424, 1568, 1589, 1617, 1769, 1842, 1924, 2159, 2724, 2898, 2909, 2927, 3361, 3816, 3896, 4163, 4915, 5084 |
| HaeIV | 3 | 72, 1676, 3769 |
| HgaI | 11 | 72, 1952, 2097, 2209, 2313, 2986, 3561, 5009, 1279, 1731, 4311 |
| HgiAI | 11 | 84, 1498, 1800, 3198, 4356, 4441, 4729, 400, 470, 478, 4664 |
| HgiCI | 6 | 90, 193, 587, 1792, 2628, 3722 |
| HgiJII | 4 | 84, 342, 378, 553 |
| HhaI | 35 | 400, 413, 422, 444, 470, 478, 1375, 1428, 1672, 1740, 1955, 2082, 2155, 2336, 2666, 2731, 2759, 2792, 3062, 3129, 3229, 3403, 3509, 3902, 3995, 4332, 4664, 4815, 4895, 5012, 5048, 5050, 5057, 5059, 5061 |
| Hin4I | 8 | 72, 79, 1275, 1676, 1809, 3769, 3843, 249 |
| HindII | 3 | 2052, 2510, 4695 |
| HindIII | 1 | 96 |
| HinfI | 16 | 676, 698, 1314, 1436, 1636, 1887, 2262, 2299, 2719, 2784, 2859, 3255, 3769, 4870, 4938, 5098 |
| HpaII | 21 | 524, 1176, 1440, 1557, 1790, 1977, 2003, 2113, 2119, 2309, 2317, 2602, 3091, 3238, 3264, 3454, 3855, 3889, 3956, 4066, 4308 |
| HphI | 7 | 616, 4248, 4489, 1234, 3625, 3852, 4474 |
| Hpy99I | 18 | 1240, 1736, 2096, 2208, 2509, 2985, 3776, 4039, 4694, 4697, 522, 1376, 1494, 1993, 2192, 2270, 2315, 5051 |
| Hpy178III | 23 | 1123, 1249, 1432, 1439, 1748, 1828, 1918, 1976, 2027, 2112, 2164, 2688, 3117, 3251, 3349, 3447, 3527, 3601, 3860, 4609, 4704, 4714, 4903 |
| Hpy188I | 24 | 81, 246, 355, 569, 1113, 1198, 1203, 1259, 1284, 1302, 1624, 2042, 2107, 2225, 2296, 2996, 3074, 3427, 3558, 3693, 4139, 4150, 4270, 4751 |
| KpnI | 1 | 90 |
| Ksp632I | 3 | 2762, 4563, 5078 |
| MaeI | 10 | 137, 383, 475, 1155, 2458, 2518, 2522, 3379, 3629, 3964 |
| MaeII | 15 | 517, 627, 670, 682, 1213, 1242, 1512, 2245, 3584, 4000, 4373, 4693, 5030, 5189, 5194 |
| MaeIII | 16 | 23, 439, 451, 1509, 2398, 3241, 3304, 3420, 3700, 4031, 4089, 4242, 4430, 5032, 5042, 5191 |
| MboI | 29 | 79, 116, 1201, 1206, 1262, 1395, 1580, 1593, 1683, 1990, 2110, 2327, 2343, 3451, 3523, 3534, 3542, 3620, 3632, 3737, 4078, 4096, 4142, 4400, 4417, 4453, 4702, 4710, 4718 |
| MboII | 15 | 310, 1311, 3382, 3531, 4867, 5078, 497, 1912, 1915, 2359, 2763, 3622, 4377, 4455, 4564 |
| McrI | 9 | 1423, 1558, 1579, 1588, 2158, 2797, 3221, 4141, 4290 |
| MfeI | 1 | 4858 |
| MluI | 1 | 4925 |
| MmeI | 6 | 1284, 1818, 3074, 3258, 672, 4795 |
| MnlI | 38 | 122, 164, 591, 1105, 1111, 1796, 2330, 2515, 2773, 3056, 3931, 4137, 4968, 226, 301, 358, 1092, 1098, 1135, 1138, 1150, 1305, 1342, 1566, 1773, 1872, 1899, 1922, 1970, 2228, 2740, 2999, 3323, 3720, 3801, 4799, 4980, 5081 |
| MseI | 24 | 100, 106, 418, 689, 787, 804, 815, 825, 2655, 2714, 3587, 3639, 3644, 3658, 3711, 3946, 3985, 4350, 4766, 4828, 4931, 5151, 5231, 5244 |
| MslI | 3 | 4022, 4181, 4540 |
| MstI | 1 | 3994 |
| MwoI | 36 | 328, 352, 413, 415, 457, 484, 514, 769, 893, 965, 1016, 1095, 1101, 1419, 1486, 1517, 1569, 1578, 1600, 1609, 1731, 1793, 1946, 1973, 2073, 2622, 2666, 2750, 2817, 2931, 3500, 3888, 4888, 5048, 5050, 5052 |
| NaeI | 2 | 523, 2316 |
| NcoI | 2 | 1061, 1570 |
| NdeI | 2 | 11, 1667 |
| NlaIII | 20 | 325, 899, 971, 1062, 1571, 1654, 1689, 2348, 2496, 2539, 2885, 3602, 4093, 4103, 4181, 4217, 4610, 4864, 4989, 5095 |
| NlaIV | 20 | 78, 90, 193, 554, 566, 587, 870, 942, 1792, 1815, 1999, 2115, 2628, 2914, 2953, 3722, 3816, 3857, 4068, 4658 |
| NruI | 1 | 4903 |
| NspI | 4 | 324, 898, 970, 2884 |
| NspBII | 9 | 111, 372, 1543, 1852, 1995, 2706, 3224, 3469, 4407 |
| PfoI | 1 | 2308 |
| PleI | 6 | 676, 3255, 698, 2784, 3769, 4938 |
| PmaCI | 3 | 1212, 2244, 5029 |
| PmeI | 1 | 104 |
| PpiI | 4 | 3572, 676, 1872, 4415 |
| PshAI | 1 | 1241 |
| PsiI | 2 | 754, 2390 |
| PstI | 1 | 1551 |
| PvuI | 2 | 1579, 4141 |
| PvuII | 2 | 372, 2706 |
| RsaI | 7 | 91, 2134, 2187, 4253, 4740, 4910, 5180 |
| RsrII | 1 | 1625 |
| SacI | 1 | 84 |
| SacII | 1 | 1995 |
| SalI | 2 | 2510, 4695 |
| SapI | 1 | 2761 |
| ScaI | 2 | 2186, 4252 |
| ScrFI | 16 | 186, 867, 922, 939, 1175, 1176, 2003, 2119, 2309, 2623, 2911, 3032, 3045, 3263, 3956, 4307 |
| SduI | 10 | 84, 342, 378, 553, 1498, 1800, 3198, 4356, 4441, 4729 |
| SecI | 15 | 185, 866, 938, 1061, 1096, 1154, 1175, 1570, 1771, 1926, 1995, 2226, 2623, 3044, 5064 |
| SexAI | 2 | 921, 3262 |
| SfaNI | 18 | 235, 902, 974, 1419, 1486, 1973, 2416, 2972, 4021, 4461, 334, 1292, 1575, 1760, 2070, 2092, 4231, 4754 |
| SfeI | 6 | 405, 1551, 3149, 3340, 4015, 4944 |
| SfiI | 1 | 768 |
| SgfI | 1 | 1578 |
| SimI | 6 | 2087, 3555, 183, 595, 3077, 3843 |
| SmaI | 1 | 1175 |
| SmlI | 5 | 99, 2990, 3252, 3526, 4394 |
| SphI | 3 | 324, 898, 970 |
| SspI | 1 | 4576 |
| Sth132I | 42 | 169, 481, 533, 1001, 1022, 1175, 1433, 1492, 1542, 1782, 2146, 2676, 3011, 3210, 3219, 3263, 3774, 4307, 4675, 4715, 428, 550, 1177, 1362, 1610, 1883, 2004, 2120, 2129, 2310, 2339, 2689, 2734, 3118, 3553, 3798, 3957, 4320, 4381, 4705, 4913, 5071 |
| StuI | 1 | 1151 |
| StyI | 6 | 1061, 1154, 1570, 5064, 866, 938 |
| TaqI | 16 | 39, 124, 593, 1249, 1264, 1273, 1333, 1750, 1963, 2065, 2090, 2260, 2511, 2984, 4425, 4696 |
| TatI | 5 | 2186, 4252, 4739, 5179, 2133 |
| TauI | 17 | 410, 424, 1101, 1425, 1587, 1843, 1994, 1997, 2157, 2271, 2810, 2928, 3083, 4164, 4286, 4515, 4757 |
| TfiI | 14 | 1314, 1436, 1636, 1887, 2262, 2299, 2719, 2859, 4870, 5098, 698, 2784, 3769, 4938 |
| TseI | 28 | 446, 1295, 1372, 1553, 1584, 1946, 2073, 2385, 2708, 2789, 2807, 3226, 3291, 3294, 3497, 3825, 4191, 4897, 1101, 1425, 1843, 1994, 2271, 2928, 3083, 4164, 4515, 4757 |
| Tsp45I | 7 | 451, 1509, 4031, 4242, 5032, 5042, 5191 |
| Tsp4CI | 14 | 20, 127, 205, 652, 1707, 1722, 2124, 2507, 2846, 2917, 3387, 3697, 4212, 5159 |
| TspDTI | 10 | 1218, 2281, 2717, 3650, 4865, 4990, 1665, 3752, 4055, 5104 |
| TspEI | 25 | 231, 812, 823, 827, 909, 981, 1073, 1462, 2061, 2424, 2565, 2582, 2657, 3642, 3948, 4203, 4825, 4859, 4962, 4993, 5143, 5149, 5153, 5208, 5235 |
| TspGWI | 6 | 1833, 4541, 4699, 5035, 1734, 4224 |
| TspRI | 28 | 204, 1698, 1727, 2449, 2671, 2780, 3286, 3299, 3567, 3716, 3821, 4168, 4195, 5000, 202, 1696, 1725, 2447, 2669, 2778, 3284, 3297, 3565, 3714, 3819, 4166, 4193, 4998 |
| Tth111I | 2 | 1275, 1719 |
| Tth111II | 6 | 3458, 3494, 156, 1447, 3488, 4786 |
| VspI | 5 | 824, 2654, 2713, 3945, 5150 |
| XhoII | 10 | 78, 1200, 2342, 3522, 3533, 3619, 3631, 4399, 4416, 4709 |
| XmaIII | 3 | 1423, 1588, 2158 |
| XmnI | 2 | 822, 4369 |