| Name | Freq | Positions |
|---|
| AatII | 2 | 1477, 4261 |
| AccI | 4 | 32, 2069, 2076, 4264 |
| AceIII | 4 | 2390, 3630, 947, 1651 |
| AciI | 50 | 61, 408, 606, 633, 1154, 1166, 1175, 1187, 1197, 1208, 1254, 1469, 1835, 1838, 2140, 2243, 2333, 2495, 2523, 2650, 2669, 2790, 3035, 3406, 3497, 3734, 3899, 3976, 4085, 4231, 488, 512, 561, 575, 578, 1489, 1588, 1640, 1743, 1904, 2299, 2309, 2376, 2383, 2404, 2900, 3044, 3688, 3855, 4184 |
| AclI | 2 | 3568, 3941 |
| AcyI | 5 | 1477, 1696, 1879, 3879, 4261 |
| AflII | 1 | 396 |
| AflIII | 4 | 228, 1365, 1809, 2450 |
| AhaIII | 4 | 402, 3207, 3226, 3918 |
| AlfI | 3 | 1035, 1107, 1772 |
| AloI | 1 | 826 |
| AluI | 23 | 134, 382, 394, 524, 691, 948, 1269, 1323, 1333, 1652, 1953, 2086, 2092, 2114, 2209, 2273, 2391, 2617, 2753, 3010, 3531, 3631, 3694 |
| AlwNI | 2 | 75, 2861 |
| ApaBI | 2 | 1045, 1117 |
| ApaLI | 3 | 1780, 2764, 4010 |
| ApoI | 3 | 127, 962, 1989 |
| AsuI | 11 | 217, 785, 1502, 1557, 1590, 1596, 1705, 3385, 3464, 3481, 3703 |
| AvaI | 3 | 1327, 1513, 1523 |
| AvaII | 7 | 1502, 1557, 1590, 1596, 3481, 3703, 3385 |
| AvrII | 1 | 1306 |
| BalI | 1 | 1436 |
| BamHI | 1 | 375 |
| BbvI | 13 | 597, 1731, 1951, 2857, 2860, 3066, 3760, 200, 2274, 2355, 2373, 2792, 3394 |
| BbvII | 1 | 461 |
| BccI | 7 | 445, 788, 1170, 3379, 3503, 3790, 770 |
| Bce83I | 4 | 2818, 2556, 3095, 3963 |
| BcefI | 4 | 736, 2936, 1453, 1734 |
| BcgI | 1 | 3859 |
| BciVI | 3 | 541, 2659, 4186 |
| BclI | 2 | 412, 1357 |
| BetI | 8 | 1458, 2656, 2803, 3634, 1508, 1764, 3423, 3876 |
| BfiI | 2 | 1190, 3388 |
| BglI | 2 | 1734, 3457 |
| BglII | 1 | 12 |
| BinI | 7 | 4, 375, 1352, 1908, 3091, 3188, 3968 |
| BplI | 1 | 1250 |
| Bpu10I | 1 | 179 |
| BsaAI | 3 | 777, 1364, 1810 |
| BsaXI | 3 | 826, 1671, 2303 |
| BseMII | 8 | 39, 2725, 3134, 3300, 109, 507, 1266, 3840 |
| BsePI | 1 | 1471 |
| BseRI | 2 | 1287, 1795 |
| BseSI | 3 | 1780, 2764, 4010 |
| BseYI | 4 | 1099, 479, 525, 2754 |
| BsiI | 2 | 2623, 4007 |
| BsiYI | 14 | 554, 880, 1025, 1208, 1593, 1619, 1620, 1625, 1899, 2292, 2466, 2484, 2650, 2929 |
| BsmI | 1 | 2019 |
| BsmAI | 3 | 4175, 365, 3410 |
| Bsp24I | 4 | 1879, 2952, 3130, 4255 |
| BspHI | 2 | 3170, 4178 |
| BspLU11I | 1 | 2450 |
| BsrI | 13 | 863, 2853, 2866, 3814, 74, 1191, 1448, 2250, 2983, 3389, 3507, 3550, 3989 |
| BsrBI | 5 | 633, 2140, 1487, 2381, 4182 |
| BsrDI | 2 | 3397, 3579 |
| BtgZI | 2 | 208, 789 |
| BtrI | 1 | 1567 |
| BtsI | 4 | 3736, 2015, 2237, 3764 |
| Cac8I | 24 | 120, 440, 471, 475, 617, 631, 674, 1031, 1050, 1103, 1122, 1471, 1707, 1727, 1768, 1778, 1882, 2241, 2270, 2379, 2465, 2502, 3062, 3453 |
| CauII | 12 | 1327, 1328, 1523, 1524, 1560, 1692, 1703, 1764, 1875, 2829, 3525, 3876 |
| CdiI | 5 | 789, 1382, 3591, 209, 3995 |
| CfrI | 6 | 1436, 1709, 1766, 1790, 2289, 3731 |
| Cfr10I | 7 | 674, 1508, 1549, 1707, 1768, 1882, 3423 |
| CjeI | 11 | 445, 1276, 2477, 3032, 4255, 1073, 1658, 1880, 2953, 3031, 3131 |
| CjePI | 10 | 1448, 2983, 4255, 21, 1729, 1879, 2952, 3130, 3250, 3722 |
| CstMI | 2 | 636, 3696 |
| CviJI | 76 | 72, 134, 150, 218, 382, 394, 417, 443, 494, 502, 524, 530, 677, 691, 705, 786, 928, 948, 1021, 1094, 1217, 1246, 1252, 1269, 1292, 1304, 1310, 1323, 1333, 1437, 1511, 1623, 1642, 1652, 1706, 1710, 1733, 1767, 1791, 1858, 1885, 1953, 2086, 2092, 2114, 2166, 2187, 2209, 2273, 2290, 2372, 2391, 2464, 2475, 2493, 2519, 2617, 2753, 2758, 2783, 2862, 2927, 2938, 2981, 3010, 3373, 3385, 3426, 3452, 3456, 3465, 3531, 3621, 3631, 3694, 3732 |
| CviRI | 19 | 165, 287, 1044, 1053, 1116, 1125, 1240, 1316, 1781, 1950, 2018, 2276, 2765, 3061, 3396, 3486, 3679, 3767, 4011 |
| DdeI | 9 | 39, 109, 180, 507, 1266, 2725, 3134, 3300, 3840 |
| DpnI | 23 | 5, 13, 21, 376, 413, 1353, 1358, 1722, 1893, 1909, 3017, 3092, 3103, 3111, 3189, 3201, 3306, 3647, 3665, 3711, 3969, 3986, 4022 |
| DraIII | 2 | 777, 1783 |
| DrdI | 2 | 820, 2552 |
| DsaI | 3 | 1213, 1433, 1735 |
| Eam1105I | 1 | 3338 |
| EciI | 8 | 511, 1165, 1186, 1196, 1207, 2522, 2668, 3496 |
| Eco31I | 2 | 365, 3410 |
| Eco57I | 2 | 2977, 4025 |
| Eco57MI | 5 | 1918, 2977, 1897, 3428, 4025 |
| EcoRII | 18 | 1018, 1027, 1074, 1091, 1593, 1599, 1620, 1625, 1644, 2189, 2477, 2598, 2611, 1327, 1523, 1764, 2829, 3876 |
| FauI | 8 | 632, 1153, 1174, 2242, 578, 1743, 1904, 2299 |
| FnuDII | 21 | 119, 207, 229, 550, 574, 594, 970, 1470, 1472, 1474, 1587, 1639, 1759, 1903, 2296, 2298, 2496, 3077, 3407, 3900, 4232 |
| Fnu4HI | 25 | 60, 200, 561, 575, 597, 1253, 1640, 1731, 1837, 1951, 2274, 2355, 2373, 2376, 2494, 2649, 2792, 2857, 2860, 3066, 3394, 3733, 3760, 3855, 4084 |
| FokI | 6 | 484, 1889, 1171, 3323, 3504, 3791 |
| FseI | 1 | 1706 |
| GdiII | 5 | 1709, 1766, 2289, 1790, 3731 |
| GsuI | 3 | 1918, 1897, 3428 |
| HaeI | 8 | 1303, 1436, 1622, 2463, 2474, 2926, 1709, 2289 |
| HaeII | 4 | 620, 628, 2324, 2694 |
| HaeIII | 21 | 218, 786, 928, 1246, 1252, 1304, 1437, 1623, 1642, 1706, 1710, 1767, 1791, 2290, 2464, 2475, 2493, 2927, 3385, 3465, 3732 |
| HaeIV | 2 | 1372, 3338 |
| HgaI | 5 | 1696, 1879, 2552, 3130, 3880 |
| HgiAI | 10 | 381, 1462, 1780, 2764, 3925, 4010, 551, 621, 629, 4233 |
| HgiCI | 5 | 387, 738, 1605, 2194, 3291 |
| HgiJII | 4 | 381, 493, 529, 704 |
| HhaI | 27 | 118, 198, 551, 564, 573, 595, 621, 629, 1471, 1473, 1586, 1638, 1758, 1902, 2232, 2297, 2325, 2358, 2628, 2695, 2795, 2969, 3078, 3471, 3564, 3901, 4233 |
| Hin4I | 5 | 376, 1372, 3338, 3412, 1672 |
| HindII | 5 | 32, 1369, 1443, 2076, 4264 |
| HindIII | 1 | 393 |
| HinfI | 13 | 35, 173, 241, 345, 827, 849, 1828, 1865, 2285, 2350, 2425, 2821, 3338 |
| HpaII | 26 | 675, 1328, 1459, 1484, 1509, 1524, 1550, 1560, 1609, 1692, 1703, 1708, 1765, 1769, 1875, 1883, 2168, 2657, 2804, 2830, 3020, 3424, 3458, 3525, 3635, 3877 |
| HphI | 9 | 767, 1419, 3817, 4058, 313, 1466, 3194, 3421, 4043 |
| Hpy99I | 15 | 1476, 1479, 1566, 2075, 2551, 3345, 3608, 4263, 4266, 673, 1482, 1548, 1659, 1836, 1881 |
| Hpy178III | 14 | 7, 17, 206, 1275, 1499, 2254, 2683, 2817, 2915, 3013, 3096, 3170, 3429, 4178 |
| Hpy188I | 18 | 54, 373, 378, 506, 720, 1265, 1350, 1355, 1669, 1862, 2562, 2640, 2993, 3127, 3262, 3708, 3719, 3839 |
| KpnI | 1 | 387 |
| Ksp632I | 2 | 2328, 4132 |
| MaeI | 10 | 434, 534, 626, 1307, 2024, 2084, 2088, 2945, 3198, 3533 |
| MaeII | 13 | 322, 668, 778, 821, 833, 1365, 1478, 1568, 1811, 3153, 3569, 3942, 4262 |
| MaeIII | 12 | 590, 602, 1570, 1964, 2807, 2870, 2986, 3269, 3600, 3658, 3811, 3999 |
| MboI | 23 | 5, 13, 21, 376, 413, 1353, 1358, 1722, 1893, 1909, 3017, 3092, 3103, 3111, 3189, 3201, 3306, 3647, 3665, 3711, 3969, 3986, 4022 |
| MboII | 10 | 170, 461, 3100, 648, 1925, 2329, 3191, 3946, 4024, 4133 |
| McrI | 7 | 1490, 1506, 1766, 2363, 2787, 3710, 3859 |
| MfeI | 1 | 161 |
| MluI | 1 | 228 |
| MmeI | 5 | 2640, 2824, 98, 823, 1668 |
| MnlI | 28 | 271, 419, 742, 1257, 1263, 1700, 1896, 2081, 2339, 2622, 3500, 3706, 102, 509, 1244, 1250, 1287, 1290, 1302, 1422, 1537, 1672, 1795, 2306, 2565, 2889, 3289, 3370 |
| MseI | 22 | 69, 131, 234, 397, 403, 569, 840, 938, 955, 966, 976, 1377, 2221, 2280, 3156, 3208, 3213, 3227, 3280, 3515, 3554, 3919 |
| MslI | 4 | 317, 3591, 3750, 4109 |
| MstI | 1 | 3563 |
| MwoI | 23 | 191, 479, 503, 564, 566, 608, 635, 665, 1022, 1045, 1117, 1168, 1247, 1253, 1464, 1734, 2188, 2232, 2316, 2383, 2497, 3069, 3457 |
| NaeI | 4 | 674, 1707, 1768, 1882 |
| NcoI | 2 | 1213, 1433 |
| NlaIII | 18 | 167, 289, 476, 1051, 1123, 1214, 1434, 1713, 1914, 2062, 2105, 2451, 3171, 3662, 3672, 3750, 3786, 4179 |
| NlaIV | 16 | 375, 387, 705, 717, 738, 1021, 1094, 1605, 2194, 2480, 2519, 3291, 3385, 3426, 3637, 4227 |
| NruI | 1 | 206 |
| NspI | 5 | 288, 475, 1050, 1122, 2450 |
| NspBII | 6 | 408, 523, 2272, 2790, 3035, 3976 |
| PfoI | 4 | 1559, 1592, 1691, 1874 |
| PleI | 7 | 827, 2821, 35, 241, 849, 2350, 3338 |
| PmaCI | 2 | 1364, 1810 |
| PmeI | 1 | 401 |
| PpiI | 3 | 3141, 827, 3984 |
| PsiI | 3 | 350, 905, 1956 |
| PvuI | 1 | 3710 |
| PvuII | 2 | 523, 2272 |
| RleAI | 1 | 1631 |
| RsaI | 5 | 43, 213, 388, 1656, 3822 |
| SacI | 1 | 381 |
| SalI | 3 | 32, 2076, 4264 |
| SapI | 1 | 2327 |
| ScaI | 1 | 3821 |
| ScrFI | 25 | 1018, 1027, 1074, 1091, 1327, 1328, 1523, 1524, 1560, 1593, 1599, 1620, 1625, 1644, 1692, 1703, 1764, 1875, 2189, 2477, 2598, 2611, 2829, 3525, 3876 |
| SduI | 9 | 381, 493, 529, 704, 1462, 1780, 2764, 3925, 4010 |
| SecI | 15 | 1017, 1026, 1090, 1213, 1248, 1306, 1327, 1433, 1523, 1619, 1625, 1735, 1793, 2189, 2610 |
| SexAI | 3 | 1073, 1598, 2828 |
| SfaNI | 9 | 1054, 1126, 1982, 2538, 3590, 4030, 57, 485, 3800 |
| SfeI | 5 | 247, 556, 2715, 2906, 3584 |
| SgrAI | 1 | 1548 |
| SimI | 6 | 3124, 746, 1572, 1762, 2643, 3412 |
| SmaI | 2 | 1327, 1523 |
| SmlI | 5 | 396, 2556, 2818, 3095, 3963 |
| SphI | 3 | 475, 1050, 1122 |
| SspI | 1 | 4145 |
| Sth132I | 36 | 18, 632, 684, 1153, 1174, 1327, 1523, 1764, 2242, 2577, 2776, 2785, 2829, 3343, 3876, 4244, 216, 579, 701, 1329, 1515, 1525, 1561, 1693, 1704, 1744, 1876, 1905, 2255, 2300, 2684, 3122, 3367, 3526, 3889, 3950 |
| StuI | 1 | 1303 |
| StyI | 6 | 1213, 1306, 1433, 1017, 1026, 1090 |
| TaqI | 9 | 33, 421, 744, 1493, 1826, 2077, 2550, 3994, 4265 |
| TatI | 2 | 42, 3821 |
| TauI | 12 | 60, 561, 575, 1253, 1640, 1837, 2376, 2494, 2649, 3733, 3855, 4084 |
| TfiI | 11 | 173, 345, 1828, 1865, 2285, 2425, 35, 241, 849, 2350, 3338 |
| TseI | 19 | 200, 597, 1731, 1951, 2274, 2355, 2373, 2792, 2857, 2860, 3066, 3394, 3760, 1253, 1837, 2494, 2649, 3733, 4084 |
| Tsp45I | 4 | 602, 1570, 3600, 3811 |
| Tsp4CI | 8 | 424, 803, 2073, 2412, 2483, 2953, 3266, 3781 |
| TspDTI | 7 | 168, 1847, 2283, 3219, 1579, 3321, 3624 |
| TspEI | 17 | 128, 162, 265, 963, 974, 978, 1061, 1133, 1225, 1375, 1990, 2131, 2148, 2223, 3211, 3517, 3772 |
| TspGWI | 2 | 2, 4110 |
| TspRI | 22 | 1449, 2015, 2237, 2346, 2852, 2865, 3136, 3285, 3390, 3737, 3764, 1447, 2013, 2235, 2344, 2850, 2863, 3134, 3283, 3388, 3735, 3762 |
| Tth111II | 4 | 3024, 3063, 89, 3057 |
| VspI | 5 | 975, 1376, 2220, 2279, 3514 |
| XhoII | 10 | 12, 375, 1352, 1908, 3091, 3102, 3188, 3200, 3968, 3985 |
| XmaIII | 1 | 1766 |
| XmnI | 2 | 973, 3938 |