| Name | Freq | Positions |
|---|
| AatII | 5 | 149, 202, 285, 471, 5722 |
| AccI | 3 | 3533, 3540, 5725 |
| AceIII | 8 | 3854, 5091, 592, 659, 692, 1013, 1346, 1995 |
| AciI | 72 | 8, 86, 114, 126, 140, 307, 535, 617, 1144, 1317, 1320, 1654, 1681, 2201, 2213, 2222, 2234, 2244, 2255, 2301, 2472, 2535, 3037, 3082, 3148, 3174, 3299, 3302, 3604, 3707, 3797, 3959, 3987, 4114, 4133, 4254, 4499, 4867, 4958, 5195, 5360, 5437, 5546, 5692, 5788, 398, 431, 556, 732, 1536, 1560, 1609, 1623, 1626, 2629, 2693, 2794, 2797, 3077, 3132, 3230, 3368, 3763, 3773, 3840, 3847, 3868, 4364, 4508, 5149, 5316, 5645 |
| AclI | 2 | 5029, 5402 |
| AcyI | 9 | 149, 202, 285, 471, 2562, 3264, 3343, 5340, 5722 |
| AflII | 1 | 6123 |
| AflIII | 2 | 3914, 5955 |
| AgeI | 1 | 628 |
| AhaIII | 4 | 2, 4668, 4687, 5379 |
| AlfI | 2 | 2082, 2154 |
| AloI | 1 | 1874 |
| AluI | 35 | 593, 660, 693, 765, 798, 836, 1014, 1173, 1347, 1389, 1572, 1739, 1996, 2316, 2370, 2380, 2668, 3126, 3417, 3550, 3556, 3578, 3673, 3737, 3855, 4081, 4171, 4217, 4474, 4992, 5092, 5155, 5861, 6109, 6121 |
| AlwNI | 2 | 4325, 5802 |
| ApaBI | 2 | 2092, 2164 |
| ApaLI | 3 | 4228, 5471, 5759 |
| ApoI | 4 | 1425, 2010, 3453, 5854 |
| AsuI | 12 | 111, 304, 813, 1214, 1270, 1833, 3079, 4846, 4925, 4942, 5164, 5944 |
| AsuII | 1 | 3244 |
| AvaI | 1 | 2374 |
| AvaII | 9 | 1270, 3079, 4942, 5164, 111, 304, 813, 1214, 4846 |
| AvrII | 1 | 2353 |
| BaeI | 1 | 992 |
| BalI | 3 | 642, 712, 2643 |
| BamHI | 1 | 6102 |
| BbvI | 25 | 880, 1164, 1171, 1387, 1645, 2624, 2666, 3187, 3415, 4321, 4324, 4527, 5221, 799, 1222, 1225, 2523, 2707, 2800, 3738, 3819, 3837, 4256, 4855, 5927 |
| BbvII | 1 | 1509 |
| BccI | 17 | 681, 933, 1203, 1836, 2217, 2775, 3277, 4840, 4964, 5251, 1040, 1063, 1160, 1211, 1818, 2447, 2875 |
| Bce83I | 5 | 4282, 2954, 4020, 4556, 5424 |
| BcefI | 9 | 699, 759, 840, 951, 1335, 1784, 2973, 4400, 2537 |
| BcgI | 2 | 742, 5320 |
| BciVI | 4 | 1589, 2771, 4123, 5647 |
| BclI | 2 | 12, 2404 |
| BetI | 10 | 628, 2594, 4120, 4267, 5095, 668, 791, 1019, 4884, 5337 |
| BfiI | 4 | 2502, 322, 2237, 4849 |
| BglI | 5 | 112, 234, 305, 635, 4918 |
| BglII | 1 | 5739 |
| BinI | 22 | 2399, 2423, 2734, 2980, 3372, 4552, 4649, 5429, 5731, 6102, 614, 1141, 1297, 2813, 3357, 4481, 4564, 4662, 5126, 5447, 5748, 6103 |
| BplI | 2 | 2297, 3228 |
| Bpu10I | 2 | 832, 5906 |
| BsaAI | 3 | 366, 1825, 2865 |
| BsaBI | 1 | 2418 |
| BsaXI | 2 | 1874, 3767 |
| BseMII | 11 | 4189, 4595, 4761, 5766, 833, 909, 1555, 2313, 3226, 5301, 5836 |
| BsePI | 2 | 967, 2960 |
| BseRI | 2 | 656, 2334 |
| BseSI | 7 | 677, 806, 2505, 2598, 4228, 5471, 5759 |
| BseYI | 6 | 2074, 2146, 1527, 1573, 3067, 4218 |
| BsgI | 3 | 845, 1169, 784 |
| BsiI | 4 | 3281, 3155, 4087, 5468 |
| BsiYI | 14 | 71, 1261, 1333, 1602, 1928, 2255, 2538, 3082, 3363, 3756, 3930, 3948, 4114, 4393 |
| BsmI | 2 | 1455, 3483 |
| BsmAI | 5 | 457, 5636, 2411, 4871, 6092 |
| Bsp24I | 5 | 294, 3343, 4591, 1237, 5716 |
| Bsp1407I | 2 | 1092, 1350 |
| BspHI | 3 | 1098, 4631, 5639 |
| BspLU11I | 1 | 3914 |
| BspMI | 3 | 2822, 3272, 2459 |
| BsrI | 15 | 1911, 2502, 2703, 4317, 4330, 5275, 323, 2238, 3714, 4447, 4850, 4968, 5011, 5450, 5801 |
| BsrBI | 7 | 1681, 3174, 3604, 730, 3228, 3845, 5643 |
| BsrDI | 3 | 2789, 4858, 5040 |
| BstEII | 1 | 823 |
| BstXI | 1 | 681 |
| BtgZI | 9 | 702, 747, 1209, 3000, 5935, 377, 1837, 2849, 3193 |
| BtsI | 6 | 847, 5197, 1451, 3479, 3701, 5225 |
| Cac8I | 39 | 112, 305, 619, 644, 762, 795, 843, 967, 1167, 1174, 1322, 1519, 1523, 1665, 1679, 1722, 2078, 2097, 2150, 2169, 2455, 2641, 2860, 2926, 2932, 2960, 2964, 3005, 3009, 3063, 3346, 3705, 3734, 3843, 3929, 3966, 4523, 4914, 5847 |
| CauII | 8 | 2374, 2375, 2566, 2726, 3339, 4293, 4986, 5337 |
| CdiI | 16 | 377, 1009, 1153, 1204, 1837, 2849, 2854, 3052, 3193, 5052, 703, 748, 1210, 3001, 5456, 5936 |
| CfrI | 9 | 642, 712, 1176, 2469, 2643, 3034, 3061, 3753, 5192 |
| Cfr10I | 10 | 628, 668, 791, 1019, 1322, 1722, 2882, 3063, 3346, 4884 |
| CjeI | 13 | 1084, 1237, 2323, 3941, 4496, 5716, 102, 295, 2120, 3344, 4417, 4495, 4592 |
| CjePI | 9 | 1237, 4447, 5716, 294, 3343, 4591, 4711, 5183, 5748 |
| CspCI | 1 | 416 |
| CstMI | 3 | 1034, 1684, 5157 |
| CviJI | 110 | 17, 69, 111, 120, 304, 593, 643, 660, 693, 713, 765, 798, 813, 836, 914, 1014, 1111, 1173, 1177, 1214, 1347, 1389, 1542, 1550, 1572, 1578, 1725, 1739, 1753, 1834, 1976, 1996, 2069, 2141, 2264, 2293, 2299, 2316, 2339, 2351, 2357, 2370, 2380, 2470, 2487, 2495, 2522, 2547, 2631, 2640, 2644, 2668, 2706, 2782, 2799, 2818, 2881, 2925, 2935, 2952, 3035, 3062, 3066, 3103, 3126, 3142, 3322, 3349, 3417, 3550, 3556, 3578, 3630, 3651, 3673, 3737, 3754, 3836, 3855, 3928, 3939, 3957, 3983, 4081, 4171, 4217, 4222, 4247, 4326, 4391, 4402, 4445, 4474, 4834, 4846, 4887, 4913, 4917, 4926, 4992, 5082, 5092, 5155, 5193, 5799, 5861, 5877, 5945, 6109, 6121 |
| CviRI | 28 | 785, 846, 1170, 1386, 1454, 2091, 2100, 2163, 2172, 2287, 2363, 2454, 2613, 2788, 2802, 3414, 3482, 3740, 4229, 4522, 4857, 4947, 5140, 5228, 5472, 5760, 5892, 6014 |
| DdeI | 12 | 833, 909, 1555, 2313, 3226, 4189, 4595, 4761, 5301, 5766, 5836, 5907 |
| DpnI | 33 | 13, 614, 869, 1141, 1289, 1297, 2400, 2405, 2424, 2735, 2813, 2894, 2903, 2981, 3357, 3373, 4481, 4553, 4564, 4572, 4650, 4662, 4767, 5108, 5126, 5172, 5430, 5447, 5483, 5732, 5740, 5748, 6103 |
| DraII | 1 | 1269 |
| DraIII | 2 | 1085, 1825 |
| DrdI | 3 | 1868, 2584, 4016 |
| DsaI | 5 | 388, 639, 1333, 2260, 2995 |
| Eam1105I | 1 | 4799 |
| EciI | 11 | 1559, 3076, 534, 1143, 2212, 2233, 2243, 2254, 3986, 4132, 4957 |
| Eco31I | 2 | 4871, 6092 |
| Eco47III | 1 | 622 |
| Eco57I | 5 | 773, 2688, 3120, 4441, 5486 |
| Eco57MI | 9 | 773, 1304, 2688, 3120, 3382, 4441, 3361, 4889, 5486 |
| EcoNI | 1 | 1261 |
| EcoRII | 20 | 117, 310, 685, 810, 820, 922, 997, 1051, 2066, 2121, 2138, 2949, 3653, 3941, 4062, 4075, 2374, 2566, 4293, 5337 |
| FalI | 2 | 1127, 2880 |
| FauI | 12 | 113, 139, 306, 1680, 2200, 2221, 3706, 1626, 2693, 3230, 3368, 3763 |
| FnuDII | 22 | 87, 966, 968, 1286, 1598, 1622, 1642, 2018, 2628, 2929, 2961, 3367, 3760, 3762, 3960, 4538, 4868, 5361, 5693, 5846, 5934, 5956 |
| Fnu4HI | 46 | 732, 799, 880, 1164, 1171, 1222, 1225, 1319, 1387, 1609, 1623, 1645, 2300, 2471, 2523, 2534, 2624, 2629, 2666, 2707, 2794, 2797, 2800, 3036, 3132, 3173, 3187, 3301, 3415, 3738, 3819, 3837, 3840, 3958, 4113, 4256, 4321, 4324, 4527, 4855, 5194, 5221, 5316, 5545, 5787, 5927 |
| FokI | 15 | 946, 1039, 1159, 1532, 2417, 2874, 2899, 3353, 682, 919, 1048, 2218, 4784, 4965, 5252 |
| GdiII | 6 | 2469, 3753, 1176, 3034, 3061, 5192 |
| GsuI | 4 | 1304, 3382, 3361, 4889 |
| HaeI | 9 | 642, 712, 1110, 2350, 2643, 3927, 3938, 4390, 3753 |
| HaeII | 8 | 622, 899, 1256, 1668, 1676, 2562, 3788, 4158 |
| HaeIII | 26 | 111, 304, 643, 713, 813, 1111, 1177, 1214, 1834, 1976, 2293, 2299, 2351, 2470, 2644, 3035, 3062, 3754, 3928, 3939, 3957, 4391, 4846, 4926, 5193, 5945 |
| HaeIV | 2 | 2735, 4799 |
| HgaI | 6 | 545, 3264, 3343, 4016, 4591, 5341 |
| HgiAI | 14 | 2672, 2862, 4228, 5386, 5471, 5759, 6108, 928, 1257, 1599, 1669, 1677, 2563, 5694 |
| HgiCI | 9 | 493, 676, 1022, 1786, 2562, 2597, 3658, 4752, 6114 |
| HgiJII | 5 | 1541, 1577, 1752, 2924, 6108 |
| HhaI | 37 | 623, 900, 928, 967, 969, 1257, 1285, 1599, 1612, 1621, 1643, 1669, 1677, 2555, 2563, 2627, 2664, 2930, 2960, 2962, 3190, 3366, 3696, 3761, 3789, 3822, 4092, 4159, 4259, 4433, 4539, 4932, 5025, 5362, 5694, 5845, 5925 |
| Hin4I | 5 | 2735, 4799, 4873, 6103, 2765 |
| HindII | 2 | 3540, 5725 |
| HindIII | 1 | 6120 |
| HinfI | 17 | 438, 1003, 1875, 1897, 3048, 3182, 3234, 3292, 3329, 3749, 3814, 3889, 4285, 4799, 5900, 5968, 6072 |
| HpaII | 27 | 629, 669, 792, 1020, 1323, 1723, 2375, 2468, 2545, 2567, 2595, 2726, 2816, 2883, 3064, 3339, 3347, 3632, 4121, 4268, 4294, 4484, 4885, 4919, 4986, 5096, 5338 |
| HphI | 15 | 392, 823, 976, 1000, 1129, 1815, 5278, 5519, 666, 1329, 2749, 4655, 4882, 5504, 6040 |
| Hpy99I | 19 | 2649, 2677, 2971, 2986, 3263, 3539, 4015, 4806, 5069, 5724, 5727, 970, 1318, 1321, 1721, 2536, 3172, 3300, 3345 |
| Hpy178III | 27 | 894, 1098, 1137, 1311, 2322, 2407, 2580, 2896, 2905, 2988, 3044, 3088, 3178, 3211, 3280, 3718, 4147, 4281, 4379, 4477, 4557, 4631, 4890, 5639, 5734, 5744, 5933 |
| Hpy188I | 21 | 611, 1554, 1768, 2312, 2397, 2402, 2528, 2872, 3225, 3326, 4026, 4104, 4457, 4588, 4723, 5169, 5180, 5300, 5781, 6100, 6105 |
| KpnI | 1 | 6114 |
| Ksp632I | 4 | 3792, 5593, 2912, 3122 |
| MaeI | 12 | 620, 1364, 1460, 1582, 1674, 2354, 3488, 3548, 3552, 4409, 4659, 4994 |
| MaeII | 17 | 150, 162, 203, 286, 367, 472, 1716, 1826, 1869, 1881, 2679, 2866, 4614, 5030, 5403, 5723, 6049 |
| MaeIII | 19 | 90, 177, 526, 824, 1313, 1400, 1638, 1650, 2684, 2990, 3428, 4271, 4334, 4450, 4730, 5061, 5119, 5272, 5460 |
| MboI | 33 | 13, 614, 869, 1141, 1289, 1297, 2400, 2405, 2424, 2735, 2813, 2894, 2903, 2981, 3357, 3373, 4481, 4553, 4564, 4572, 4650, 4662, 4767, 5108, 5126, 5172, 5430, 5447, 5483, 5732, 5740, 5748, 6103 |
| MboII | 17 | 1509, 2912, 3122, 4412, 4561, 5897, 891, 936, 939, 1696, 3222, 3389, 3793, 4652, 5407, 5485, 5594 |
| McrI | 6 | 630, 2469, 3827, 4251, 5171, 5320 |
| MfeI | 1 | 5888 |
| MluI | 1 | 5955 |
| MmeI | 4 | 4104, 4288, 1871, 5825 |
| MnlI | 39 | 19, 1790, 2304, 2310, 3154, 3360, 3545, 3803, 4086, 4961, 5167, 5998, 576, 656, 737, 743, 911, 944, 974, 986, 1037, 1157, 1359, 1557, 2291, 2297, 2334, 2337, 2349, 2421, 2485, 2621, 2978, 3770, 4029, 4353, 4750, 4831, 5829 |
| MseI | 21 | 3, 1617, 1888, 1986, 2003, 2014, 2024, 3685, 3744, 4617, 4669, 4674, 4688, 4741, 4976, 5015, 5380, 5796, 5858, 5961, 6124 |
| MslI | 11 | 389, 667, 682, 817, 1123, 1498, 2996, 5052, 5211, 5570, 6044 |
| MstI | 2 | 2663, 5024 |
| MwoI | 42 | 112, 234, 266, 305, 398, 422, 635, 726, 732, 786, 799, 843, 852, 1527, 1551, 1612, 1614, 1656, 1683, 1713, 2092, 2164, 2215, 2294, 2300, 2548, 2632, 2655, 2794, 2800, 2917, 2953, 3000, 3267, 3652, 3696, 3780, 3847, 3961, 4530, 4918, 5918 |
| NaeI | 4 | 1322, 1722, 3063, 3346 |
| NarI | 1 | 2562 |
| NcoI | 4 | 388, 639, 2260, 2995 |
| NdeI | 1 | 261 |
| NheI | 1 | 619 |
| NlaIII | 30 | 329, 389, 640, 874, 904, 1099, 1294, 1339, 1498, 1524, 2098, 2170, 2261, 2434, 2779, 2965, 2996, 3022, 3378, 3526, 3569, 3915, 4632, 5123, 5133, 5211, 5247, 5640, 5894, 6016 |
| NlaIV | 21 | 493, 676, 1022, 1270, 1753, 1765, 1786, 2069, 2141, 2562, 2597, 3658, 3944, 3983, 4752, 4846, 4887, 5098, 5688, 6102, 6114 |
| NruI | 1 | 5933 |
| NspI | 6 | 1523, 2097, 2169, 2964, 3914, 6015 |
| NspBII | 8 | 8, 1172, 1571, 2667, 3736, 4254, 4499, 5437 |
| OliI | 2 | 667, 817 |
| PflMI | 1 | 1333 |
| PfoI | 2 | 921, 3338 |
| PleI | 8 | 1875, 4285, 438, 1897, 3234, 3814, 4799, 5968 |
| PmeI | 1 | 1 |
| PpiI | 5 | 4602, 656, 974, 1875, 5445 |
| PpuMI | 1 | 1269 |
| PsiI | 4 | 1392, 1953, 3420, 6077 |
| PstI | 1 | 2612 |
| PvuI | 1 | 5171 |
| PvuII | 4 | 1172, 1571, 2667, 3736 |
| RleAI | 2 | 1083, 1504 |
| RsaI | 14 | 246, 271, 326, 359, 410, 567, 1069, 1093, 1351, 2868, 5283, 5770, 5940, 6115 |
| RsrII | 1 | 3078 |
| SacI | 1 | 6108 |
| SalI | 2 | 3540, 5725 |
| SapI | 3 | 3791, 2912, 3122 |
| SauI | 1 | 908 |
| ScaI | 1 | 5282 |
| ScrFI | 24 | 117, 310, 685, 810, 820, 922, 997, 1051, 2066, 2121, 2138, 2374, 2375, 2566, 2726, 2949, 3339, 3653, 3941, 4062, 4075, 4293, 4986, 5337 |
| SduI | 15 | 677, 806, 1541, 1577, 1752, 2505, 2598, 2672, 2862, 2924, 4228, 5386, 5471, 5759, 6108 |
| SecI | 19 | 388, 639, 809, 819, 972, 996, 1051, 1266, 1333, 2065, 2137, 2260, 2295, 2353, 2374, 2726, 2995, 3653, 4074 |
| SexAI | 2 | 2120, 4292 |
| SfaNI | 21 | 1008, 1122, 1326, 1418, 2101, 2173, 2853, 2917, 3192, 3446, 4002, 5051, 5491, 395, 749, 1533, 2531, 2786, 3002, 5261, 5784 |
| SfeI | 6 | 1604, 2612, 4179, 4370, 5045, 5974 |
| SgrAI | 1 | 667 |
| SimI | 9 | 54, 4585, 135, 769, 1271, 1794, 2992, 4107, 4873 |
| SmaI | 1 | 2374 |
| SmlI | 6 | 2954, 4020, 4282, 4556, 5424, 6123 |
| SnaBI | 1 | 366 |
| SphI | 4 | 1523, 2097, 2169, 2964 |
| SspI | 1 | 5606 |
| Sth132I | 45 | 113, 139, 306, 866, 1229, 1680, 1732, 2200, 2221, 2374, 2566, 2969, 3108, 3179, 3706, 4041, 4240, 4249, 4293, 4804, 5337, 5705, 5745, 52, 444, 507, 1627, 1749, 2376, 2652, 2694, 2727, 3231, 3340, 3369, 3719, 3764, 4148, 4583, 4828, 4987, 5350, 5411, 5735, 5943 |
| StuI | 1 | 2350 |
| StyI | 9 | 388, 639, 1266, 2260, 2353, 2995, 1333, 2065, 2137 |
| TaqI | 17 | 21, 942, 984, 1011, 1155, 1792, 2676, 2832, 2856, 2892, 3054, 3245, 3290, 3541, 4014, 5455, 5726 |
| TatI | 9 | 245, 325, 358, 409, 1068, 1092, 1350, 5282, 5769 |
| TauI | 21 | 732, 1319, 1609, 1623, 2300, 2471, 2534, 2629, 2794, 2797, 3036, 3132, 3173, 3301, 3840, 3958, 4113, 5194, 5316, 5545, 5787 |
| TfiI | 15 | 1003, 3048, 3182, 3292, 3329, 3749, 3889, 5900, 6072, 438, 1897, 3234, 3814, 4799, 5968 |
| TseI | 37 | 799, 880, 1164, 1171, 1222, 1225, 1387, 1645, 2523, 2624, 2666, 2707, 2800, 3187, 3415, 3738, 3819, 3837, 4256, 4321, 4324, 4527, 4855, 5221, 5927, 1319, 2300, 2471, 2534, 3036, 3173, 3301, 3958, 4113, 5194, 5545, 5787 |
| Tsp45I | 7 | 824, 1313, 1650, 2684, 2990, 5061, 5272 |
| Tsp4CI | 16 | 24, 102, 224, 295, 569, 607, 1851, 2941, 3057, 3165, 3537, 3876, 3947, 4417, 4727, 5242 |
| TspDTI | 11 | 875, 2607, 3311, 3747, 4680, 5895, 64, 779, 3050, 4782, 5085 |
| TspEI | 18 | 47, 1426, 2011, 2022, 2026, 2108, 2180, 2272, 3454, 3595, 3612, 3687, 4672, 4978, 5233, 5855, 5889, 5992 |
| TspGWI | 3 | 5571, 5729, 5254 |
| TspRI | 26 | 848, 1451, 2686, 3479, 3701, 3810, 4316, 4329, 4597, 4746, 4851, 5198, 5225, 846, 1449, 2684, 3477, 3699, 3808, 4314, 4327, 4595, 4744, 4849, 5196, 5223 |
| Tth111I | 1 | 2678 |
| Tth111II | 5 | 4488, 4524, 3008, 4518, 5816 |
| VspI | 4 | 2023, 3684, 3743, 4975 |
| XhoII | 14 | 613, 1140, 2399, 2734, 2980, 3372, 4552, 4563, 4649, 4661, 5429, 5446, 5739, 6102 |
| XmaIII | 1 | 2469 |
| XmnI | 2 | 2021, 5399 |
