| Name | Freq | Positions |
|---|
| AatII | 1 | 4320 |
| AccI | 3 | 2131, 2138, 4323 |
| AceIII | 3 | 2452, 3689, 593 |
| AciI | 59 | 252, 279, 799, 811, 820, 832, 842, 853, 899, 1070, 1133, 1635, 1680, 1746, 1772, 1897, 1900, 2202, 2305, 2395, 2557, 2585, 2712, 2731, 2852, 3097, 3465, 3556, 3793, 3958, 4035, 4144, 4290, 4386, 4705, 4780, 134, 158, 207, 221, 224, 1227, 1291, 1392, 1395, 1675, 1730, 1828, 1966, 2361, 2371, 2438, 2445, 2466, 2962, 3106, 3747, 3914, 4243 |
| AclI | 2 | 3627, 4000 |
| AcyI | 5 | 1160, 1862, 1941, 3938, 4320 |
| AflII | 1 | 4768 |
| AflIII | 2 | 2512, 4553 |
| AhaIII | 4 | 3266, 3285, 3977, 4774 |
| AlfI | 2 | 680, 752 |
| AloI | 1 | 472 |
| AluI | 24 | 170, 337, 594, 914, 968, 978, 1266, 1724, 2015, 2148, 2154, 2176, 2271, 2335, 2453, 2679, 2769, 2815, 3072, 3590, 3690, 3753, 4459, 4766 |
| AlwNI | 2 | 2923, 4400 |
| ApaBI | 2 | 690, 762 |
| ApaLI | 3 | 2826, 4069, 4357 |
| ApoI | 3 | 608, 2051, 4452 |
| AsuI | 7 | 431, 1677, 3444, 3523, 3540, 3762, 4542 |
| AsuII | 1 | 1842 |
| AvaI | 1 | 972 |
| AvaII | 4 | 1677, 3540, 3762, 3444 |
| AvrII | 1 | 951 |
| BalI | 1 | 1241 |
| BamHI | 1 | 4700 |
| BbvI | 18 | 243, 1222, 1264, 1785, 2013, 2919, 2922, 3125, 3819, 1121, 1305, 1398, 2336, 2417, 2435, 2854, 3453, 4525 |
| BbvII | 1 | 107 |
| BccI | 11 | 434, 815, 1373, 1875, 3438, 3562, 3849, 4817, 416, 1045, 1473 |
| Bce83I | 5 | 2880, 1552, 2618, 3154, 4022 |
| BcefI | 4 | 382, 1571, 2998, 1135 |
| BcgI | 1 | 3918 |
| BciVI | 4 | 187, 1369, 2721, 4245 |
| BclI | 2 | 1002, 4784 |
| BetI | 6 | 1192, 2718, 2865, 3693, 3482, 3935 |
| BfiI | 3 | 1100, 835, 3447 |
| BglI | 1 | 3516 |
| BglII | 1 | 4337 |
| BinI | 19 | 997, 1021, 1332, 1578, 1970, 3150, 3247, 4027, 4329, 4700, 1411, 1955, 3079, 3162, 3260, 3724, 4045, 4346, 4701 |
| BplI | 2 | 895, 1826 |
| Bpu10I | 1 | 4504 |
| BsaAI | 2 | 423, 1463 |
| BsaBI | 1 | 1016 |
| BsaXI | 2 | 472, 2365 |
| BseMII | 11 | 2787, 3193, 3359, 4364, 4744, 153, 911, 1824, 3899, 4434, 4714 |
| BsePI | 1 | 1558 |
| BseRI | 1 | 932 |
| BseSI | 5 | 1103, 1196, 2826, 4069, 4357 |
| BseYI | 6 | 672, 744, 125, 171, 1665, 2816 |
| BsiI | 4 | 1879, 1753, 2685, 4066 |
| BsiYI | 11 | 200, 526, 853, 1136, 1680, 1961, 2354, 2528, 2546, 2712, 2991 |
| BsmI | 1 | 2081 |
| BsmAI | 4 | 4234, 1009, 3469, 4690 |
| Bsp24I | 3 | 1941, 3189, 4314 |
| BspHI | 2 | 3229, 4237 |
| BspLU11I | 1 | 2512 |
| BspMI | 3 | 1420, 1870, 1057 |
| BsrI | 14 | 509, 1100, 1301, 2915, 2928, 3873, 836, 2312, 3045, 3448, 3566, 3609, 4048, 4399 |
| BsrBI | 6 | 279, 1772, 2202, 1826, 2443, 4241 |
| BsrDI | 3 | 1387, 3456, 3638 |
| BtgZI | 5 | 1598, 4533, 435, 1447, 1791 |
| BtsI | 4 | 3795, 2077, 2299, 3823 |
| Cac8I | 29 | 117, 121, 263, 277, 320, 676, 695, 748, 767, 1053, 1239, 1458, 1524, 1530, 1558, 1562, 1603, 1607, 1661, 1944, 2303, 2332, 2441, 2527, 2564, 3121, 3512, 4445, 4812 |
| CauII | 8 | 972, 973, 1164, 1324, 1937, 2891, 3584, 3935 |
| CdiI | 10 | 33, 435, 1447, 1452, 1650, 1791, 3650, 1599, 4054, 4534 |
| CfrI | 6 | 1067, 1241, 1632, 1659, 2351, 3790 |
| Cfr10I | 5 | 320, 1480, 1661, 1944, 3482 |
| CjeI | 10 | 921, 2539, 3094, 4314, 4817, 718, 1942, 3015, 3093, 3190 |
| CjePI | 7 | 3045, 4314, 1941, 3189, 3309, 3781, 4346 |
| CstMI | 2 | 282, 3755 |
| CviJI | 89 | 140, 148, 170, 176, 323, 337, 351, 432, 574, 594, 667, 739, 862, 891, 897, 914, 937, 949, 955, 968, 978, 1068, 1085, 1093, 1120, 1145, 1229, 1238, 1242, 1266, 1304, 1380, 1397, 1416, 1479, 1523, 1533, 1550, 1633, 1660, 1664, 1701, 1724, 1740, 1920, 1947, 2015, 2148, 2154, 2176, 2228, 2249, 2271, 2335, 2352, 2434, 2453, 2526, 2537, 2555, 2581, 2679, 2769, 2815, 2820, 2845, 2924, 2989, 3000, 3043, 3072, 3432, 3444, 3485, 3511, 3515, 3524, 3590, 3680, 3690, 3753, 3791, 4397, 4459, 4475, 4543, 4766, 4789, 4815 |
| CviRI | 24 | 31, 689, 698, 761, 770, 885, 961, 1052, 1211, 1386, 1400, 2012, 2080, 2338, 2827, 3120, 3455, 3545, 3738, 3826, 4070, 4358, 4490, 4612 |
| DdeI | 13 | 44, 153, 911, 1824, 2787, 3193, 3359, 3899, 4364, 4434, 4505, 4714, 4744 |
| DpnI | 29 | 998, 1003, 1022, 1333, 1411, 1492, 1501, 1579, 1955, 1971, 3079, 3151, 3162, 3170, 3248, 3260, 3365, 3706, 3724, 3770, 4028, 4045, 4081, 4330, 4338, 4346, 4701, 4734, 4785 |
| DraIII | 1 | 423 |
| DrdI | 3 | 466, 1182, 2614 |
| DsaI | 2 | 858, 1593 |
| Eam1105I | 1 | 3397 |
| EciI | 9 | 157, 1674, 810, 831, 841, 852, 2584, 2730, 3555 |
| Eco31I | 2 | 3469, 4690 |
| Eco57I | 4 | 1286, 1718, 3039, 4084 |
| Eco57MI | 7 | 1286, 1718, 1980, 3039, 1959, 3487, 4084 |
| EcoRII | 13 | 664, 719, 736, 1547, 2251, 2539, 2660, 2673, 4855, 972, 1164, 2891, 3935 |
| FalI | 1 | 1478 |
| FauI | 10 | 278, 798, 819, 2304, 4704, 224, 1291, 1828, 1966, 2361 |
| FnuDII | 18 | 196, 220, 240, 616, 1226, 1527, 1559, 1965, 2358, 2360, 2558, 3136, 3466, 3959, 4291, 4444, 4532, 4554 |
| Fnu4HI | 37 | 207, 221, 243, 898, 1069, 1121, 1132, 1222, 1227, 1264, 1305, 1392, 1395, 1398, 1634, 1730, 1771, 1785, 1899, 2013, 2336, 2417, 2435, 2438, 2556, 2711, 2854, 2919, 2922, 3125, 3453, 3792, 3819, 3914, 4143, 4385, 4525 |
| FokI | 9 | 130, 1015, 1472, 1497, 1951, 816, 3382, 3563, 3850 |
| GdiII | 5 | 1067, 2351, 1632, 1659, 3790 |
| GsuI | 3 | 1980, 1959, 3487 |
| HaeI | 6 | 948, 1241, 2525, 2536, 2988, 2351 |
| HaeII | 5 | 266, 274, 1160, 2386, 2756 |
| HaeIII | 18 | 432, 574, 891, 897, 949, 1068, 1242, 1633, 1660, 2352, 2526, 2537, 2555, 2989, 3444, 3524, 3791, 4543 |
| HaeIV | 2 | 1333, 3397 |
| HgaI | 5 | 1862, 1941, 2614, 3189, 3939 |
| HgiAI | 11 | 1270, 1460, 2826, 3984, 4069, 4357, 197, 267, 275, 1161, 4292 |
| HgiCI | 6 | 384, 1160, 1195, 2256, 3350, 4862 |
| HgiJII | 4 | 139, 175, 350, 1522 |
| HhaI | 30 | 197, 210, 219, 241, 267, 275, 1153, 1161, 1225, 1262, 1528, 1558, 1560, 1788, 1964, 2294, 2359, 2387, 2420, 2690, 2757, 2857, 3031, 3137, 3530, 3623, 3960, 4292, 4443, 4523 |
| Hin4I | 5 | 1333, 3397, 3471, 46, 1363 |
| HindII | 2 | 2138, 4323 |
| HindIII | 1 | 4765 |
| HinfI | 15 | 473, 495, 1646, 1780, 1832, 1890, 1927, 2347, 2412, 2487, 2883, 3397, 4498, 4566, 4725 |
| HpaII | 22 | 321, 973, 1066, 1143, 1165, 1193, 1324, 1414, 1481, 1662, 1937, 1945, 2230, 2719, 2866, 2892, 3082, 3483, 3517, 3584, 3694, 3936 |
| HphI | 8 | 413, 3876, 4117, 1347, 3253, 3480, 4102, 4638 |
| Hpy99I | 16 | 1247, 1275, 1569, 1584, 1861, 2137, 2613, 3404, 3667, 4322, 4325, 319, 1134, 1770, 1898, 1943 |
| Hpy178III | 24 | 920, 1005, 1178, 1494, 1503, 1586, 1642, 1686, 1776, 1809, 1878, 2316, 2745, 2879, 2977, 3075, 3155, 3229, 3488, 4237, 4332, 4342, 4531, 4728 |
| Hpy188I | 20 | 43, 152, 366, 910, 995, 1000, 1126, 1470, 1823, 1924, 2624, 2702, 3055, 3186, 3321, 3767, 3778, 3898, 4379, 4698 |
| Ksp632I | 4 | 2390, 4191, 1510, 1720 |
| MaeI | 10 | 180, 272, 952, 2086, 2146, 2150, 3007, 3257, 3592, 4806 |
| MaeII | 11 | 314, 424, 467, 479, 1277, 1464, 3212, 3628, 4001, 4321, 4647 |
| MaeIII | 13 | 236, 248, 1282, 1588, 2026, 2869, 2932, 3048, 3328, 3659, 3717, 3870, 4058 |
| MboI | 29 | 998, 1003, 1022, 1333, 1411, 1492, 1501, 1579, 1955, 1971, 3079, 3151, 3162, 3170, 3248, 3260, 3365, 3706, 3724, 3770, 4028, 4045, 4081, 4330, 4338, 4346, 4701, 4734, 4785 |
| MboII | 14 | 107, 1510, 1720, 3010, 3159, 4495, 294, 1820, 1987, 2391, 3250, 4005, 4083, 4192 |
| McrI | 5 | 1067, 2425, 2849, 3769, 3918 |
| MfeI | 1 | 4486 |
| MluI | 1 | 4553 |
| MmeI | 4 | 2702, 2886, 469, 4423 |
| MnlI | 31 | 388, 902, 908, 1752, 1958, 2143, 2401, 2684, 3559, 3765, 4596, 4791, 4833, 23, 98, 155, 889, 895, 932, 935, 947, 1019, 1083, 1219, 1576, 2368, 2627, 2951, 3348, 3429, 4427 |
| MseI | 21 | 215, 486, 584, 601, 612, 622, 2283, 2342, 3215, 3267, 3272, 3286, 3339, 3574, 3613, 3978, 4394, 4456, 4559, 4769, 4775 |
| MslI | 5 | 1594, 3650, 3809, 4168, 4642 |
| MstI | 2 | 1261, 3622 |
| MwoI | 29 | 125, 149, 210, 212, 254, 281, 311, 690, 762, 813, 892, 898, 1146, 1230, 1253, 1392, 1398, 1515, 1551, 1598, 1865, 2250, 2294, 2378, 2445, 2559, 3128, 3516, 4516 |
| NaeI | 3 | 320, 1661, 1944 |
| NarI | 1 | 1160 |
| NcoI | 2 | 858, 1593 |
| NlaIII | 21 | 122, 696, 768, 859, 1032, 1377, 1563, 1594, 1620, 1976, 2124, 2167, 2513, 3230, 3721, 3731, 3809, 3845, 4238, 4492, 4614 |
| NlaIV | 17 | 351, 363, 384, 667, 739, 1160, 1195, 2256, 2542, 2581, 3350, 3444, 3485, 3696, 4286, 4700, 4862 |
| NruI | 1 | 4531 |
| NspI | 6 | 121, 695, 767, 1562, 2512, 4613 |
| NspBII | 7 | 169, 1265, 2334, 2852, 3097, 4035, 4780 |
| PfoI | 1 | 1936 |
| PleI | 7 | 473, 2883, 495, 1832, 2412, 3397, 4566 |
| PmeI | 1 | 4773 |
| PpiI | 3 | 3200, 473, 4043 |
| PsiI | 3 | 551, 2018, 4675 |
| PstI | 1 | 1210 |
| PvuI | 1 | 3769 |
| PvuII | 3 | 169, 1265, 2334 |
| RsaI | 6 | 1466, 3881, 4368, 4538, 4718, 4741 |
| RsrII | 1 | 1676 |
| SalI | 2 | 2138, 4323 |
| SapI | 3 | 2389, 1510, 1720 |
| ScaI | 3 | 3880, 4717, 4740 |
| ScrFI | 17 | 664, 719, 736, 972, 973, 1164, 1324, 1547, 1937, 2251, 2539, 2660, 2673, 2891, 3584, 3935, 4855 |
| SduI | 12 | 139, 175, 350, 1103, 1196, 1270, 1460, 1522, 2826, 3984, 4069, 4357 |
| SecI | 11 | 663, 735, 858, 893, 951, 972, 1324, 1593, 2251, 2672, 4854 |
| SexAI | 2 | 718, 2890 |
| SfaNI | 16 | 32, 699, 771, 1451, 1515, 1790, 2044, 2600, 3649, 4089, 131, 1129, 1384, 1600, 3859, 4382 |
| SfeI | 6 | 202, 1210, 2777, 2968, 3643, 4572 |
| SimI | 6 | 3183, 392, 1590, 2705, 3471, 4852 |
| SmaI | 1 | 972 |
| SmlI | 6 | 1552, 2618, 2880, 3154, 4022, 4768 |
| SphI | 4 | 121, 695, 767, 1562 |
| SspI | 1 | 4204 |
| Sth132I | 39 | 278, 330, 798, 819, 972, 1164, 1567, 1706, 1777, 2304, 2639, 2838, 2847, 2891, 3402, 3935, 4303, 4343, 4704, 4838, 225, 347, 974, 1250, 1292, 1325, 1829, 1938, 1967, 2317, 2362, 2746, 3181, 3426, 3585, 3948, 4009, 4333, 4541 |
| StuI | 1 | 948 |
| StyI | 5 | 858, 951, 1593, 663, 735 |
| TaqI | 15 | 390, 1274, 1430, 1454, 1490, 1652, 1843, 1888, 2139, 2612, 4053, 4324, 4723, 4736, 4793 |
| TatI | 4 | 3880, 4367, 4717, 4740 |
| TauI | 19 | 207, 221, 898, 1069, 1132, 1227, 1392, 1395, 1634, 1730, 1771, 1899, 2438, 2556, 2711, 3792, 3914, 4143, 4385 |
| TfiI | 13 | 1646, 1780, 1890, 1927, 2347, 2487, 4498, 4725, 495, 1832, 2412, 3397, 4566 |
| TseI | 29 | 243, 1121, 1222, 1264, 1305, 1398, 1785, 2013, 2336, 2417, 2435, 2854, 2919, 2922, 3125, 3453, 3819, 4525, 898, 1069, 1132, 1634, 1771, 1899, 2556, 2711, 3792, 4143, 4385 |
| Tsp45I | 5 | 248, 1282, 1588, 3659, 3870 |
| Tsp4CI | 12 | 2, 449, 1539, 1655, 1763, 2135, 2474, 2545, 3015, 3325, 3840, 4796 |
| TspDTI | 8 | 1205, 1909, 2345, 3278, 4493, 1648, 3380, 3683 |
| TspEI | 17 | 28, 609, 620, 624, 706, 778, 870, 2052, 2193, 2210, 2285, 3270, 3576, 3831, 4453, 4487, 4590 |
| TspGWI | 3 | 4169, 4327, 3852 |
| TspRI | 12 | 1, 1284, 2077, 2299, 2408, 2914, 2927, 3195, 3344, 3449, 3796, 3823 |
| Tth111I | 1 | 1276 |
| Tth111II | 6 | 3086, 3122, 1606, 3116, 4414, 4825 |
| VspI | 4 | 621, 2282, 2341, 3573 |
| XhoII | 12 | 997, 1332, 1578, 1970, 3150, 3161, 3247, 3259, 4027, 4044, 4337, 4700 |
| XmaIII | 1 | 1067 |
| XmnI | 2 | 619, 3997 |