| Name | Freq | Positions |
|---|
| AatII | 5 | 169, 222, 305, 491, 5742 |
| AccI | 3 | 3553, 3560, 5745 |
| AceIII | 8 | 3874, 5111, 612, 679, 712, 1033, 1366, 2015 |
| AciI | 72 | 28, 106, 134, 146, 160, 327, 555, 637, 1164, 1337, 1340, 1674, 1701, 2221, 2233, 2242, 2254, 2264, 2275, 2321, 2492, 2555, 3057, 3102, 3168, 3194, 3319, 3322, 3624, 3727, 3817, 3979, 4007, 4134, 4153, 4274, 4519, 4887, 4978, 5215, 5380, 5457, 5566, 5712, 5808, 418, 451, 576, 752, 1556, 1580, 1629, 1643, 1646, 2649, 2713, 2814, 2817, 3097, 3152, 3250, 3388, 3783, 3793, 3860, 3867, 3888, 4384, 4528, 5169, 5336, 5665 |
| AclI | 2 | 5049, 5422 |
| AcyI | 9 | 169, 222, 305, 491, 2582, 3284, 3363, 5360, 5742 |
| AflII | 1 | 16 |
| AflIII | 2 | 3934, 5975 |
| AgeI | 1 | 648 |
| AhaIII | 4 | 22, 4688, 4707, 5399 |
| AlfI | 2 | 2102, 2174 |
| AloI | 1 | 1894 |
| AluI | 35 | 2, 14, 613, 680, 713, 785, 818, 856, 1034, 1193, 1367, 1409, 1592, 1759, 2016, 2336, 2390, 2400, 2688, 3146, 3437, 3570, 3576, 3598, 3693, 3757, 3875, 4101, 4191, 4237, 4494, 5012, 5112, 5175, 5881 |
| AlwNI | 2 | 4345, 5822 |
| ApaBI | 2 | 2112, 2184 |
| ApaLI | 3 | 4248, 5491, 5779 |
| ApoI | 4 | 1445, 2030, 3473, 5874 |
| AsuI | 12 | 131, 324, 833, 1234, 1290, 1853, 3099, 4866, 4945, 4962, 5184, 5964 |
| AsuII | 1 | 3264 |
| AvaI | 1 | 2394 |
| AvaII | 9 | 1290, 3099, 4962, 5184, 131, 324, 833, 1234, 4866 |
| AvrII | 1 | 2373 |
| BaeI | 1 | 1012 |
| BalI | 3 | 662, 732, 2663 |
| BamHI | 1 | 6122 |
| BbvI | 25 | 900, 1184, 1191, 1407, 1665, 2644, 2686, 3207, 3435, 4341, 4344, 4547, 5241, 819, 1242, 1245, 2543, 2727, 2820, 3758, 3839, 3857, 4276, 4875, 5947 |
| BbvII | 1 | 1529 |
| BccI | 17 | 701, 953, 1223, 1856, 2237, 2795, 3297, 4860, 4984, 5271, 1060, 1083, 1180, 1231, 1838, 2467, 2895 |
| Bce83I | 5 | 4302, 2974, 4040, 4576, 5444 |
| BcefI | 9 | 719, 779, 860, 971, 1355, 1804, 2993, 4420, 2557 |
| BcgI | 2 | 762, 5340 |
| BciVI | 4 | 1609, 2791, 4143, 5667 |
| BclI | 2 | 32, 2424 |
| BetI | 10 | 648, 2614, 4140, 4287, 5115, 688, 811, 1039, 4904, 5357 |
| BfiI | 4 | 2522, 342, 2257, 4869 |
| BglI | 5 | 132, 254, 325, 655, 4938 |
| BglII | 1 | 5759 |
| BinI | 22 | 2419, 2443, 2754, 3000, 3392, 4572, 4669, 5449, 5751, 6122, 634, 1161, 1317, 2833, 3377, 4501, 4584, 4682, 5146, 5467, 5768, 6123 |
| BplI | 2 | 2317, 3248 |
| Bpu10I | 2 | 852, 5926 |
| BsaAI | 3 | 386, 1845, 2885 |
| BsaBI | 1 | 2438 |
| BsaXI | 2 | 1894, 3787 |
| BseMII | 11 | 4209, 4615, 4781, 5786, 853, 929, 1575, 2333, 3246, 5321, 5856 |
| BsePI | 2 | 987, 2980 |
| BseRI | 2 | 676, 2354 |
| BseSI | 7 | 697, 826, 2525, 2618, 4248, 5491, 5779 |
| BseYI | 6 | 2094, 2166, 1547, 1593, 3087, 4238 |
| BsgI | 3 | 865, 1189, 804 |
| BsiI | 4 | 3301, 3175, 4107, 5488 |
| BsiYI | 14 | 91, 1281, 1353, 1622, 1948, 2275, 2558, 3102, 3383, 3776, 3950, 3968, 4134, 4413 |
| BsmI | 2 | 1475, 3503 |
| BsmAI | 5 | 477, 5656, 2431, 4891, 6112 |
| Bsp24I | 5 | 314, 3363, 4611, 1257, 5736 |
| Bsp1407I | 2 | 1112, 1370 |
| BspHI | 3 | 1118, 4651, 5659 |
| BspLU11I | 1 | 3934 |
| BspMI | 3 | 2842, 3292, 2479 |
| BsrI | 15 | 1931, 2522, 2723, 4337, 4350, 5295, 343, 2258, 3734, 4467, 4870, 4988, 5031, 5470, 5821 |
| BsrBI | 7 | 1701, 3194, 3624, 750, 3248, 3865, 5663 |
| BsrDI | 3 | 2809, 4878, 5060 |
| BstEII | 1 | 843 |
| BstXI | 1 | 701 |
| BtgZI | 9 | 722, 767, 1229, 3020, 5955, 397, 1857, 2869, 3213 |
| BtsI | 6 | 867, 5217, 1471, 3499, 3721, 5245 |
| Cac8I | 39 | 132, 325, 639, 664, 782, 815, 863, 987, 1187, 1194, 1342, 1539, 1543, 1685, 1699, 1742, 2098, 2117, 2170, 2189, 2475, 2661, 2880, 2946, 2952, 2980, 2984, 3025, 3029, 3083, 3366, 3725, 3754, 3863, 3949, 3986, 4543, 4934, 5867 |
| CauII | 8 | 2394, 2395, 2586, 2746, 3359, 4313, 5006, 5357 |
| CdiI | 16 | 397, 1029, 1173, 1224, 1857, 2869, 2874, 3072, 3213, 5072, 723, 768, 1230, 3021, 5476, 5956 |
| CfrI | 9 | 662, 732, 1196, 2489, 2663, 3054, 3081, 3773, 5212 |
| Cfr10I | 10 | 648, 688, 811, 1039, 1342, 1742, 2902, 3083, 3366, 4904 |
| CjeI | 13 | 1104, 1257, 2343, 3961, 4516, 5736, 122, 315, 2140, 3364, 4437, 4515, 4612 |
| CjePI | 9 | 1257, 4467, 5736, 314, 3363, 4611, 4731, 5203, 5768 |
| CspCI | 1 | 436 |
| CstMI | 3 | 1054, 1704, 5177 |
| CviJI | 110 | 2, 14, 37, 89, 131, 140, 324, 613, 663, 680, 713, 733, 785, 818, 833, 856, 934, 1034, 1131, 1193, 1197, 1234, 1367, 1409, 1562, 1570, 1592, 1598, 1745, 1759, 1773, 1854, 1996, 2016, 2089, 2161, 2284, 2313, 2319, 2336, 2359, 2371, 2377, 2390, 2400, 2490, 2507, 2515, 2542, 2567, 2651, 2660, 2664, 2688, 2726, 2802, 2819, 2838, 2901, 2945, 2955, 2972, 3055, 3082, 3086, 3123, 3146, 3162, 3342, 3369, 3437, 3570, 3576, 3598, 3650, 3671, 3693, 3757, 3774, 3856, 3875, 3948, 3959, 3977, 4003, 4101, 4191, 4237, 4242, 4267, 4346, 4411, 4422, 4465, 4494, 4854, 4866, 4907, 4933, 4937, 4946, 5012, 5102, 5112, 5175, 5213, 5819, 5881, 5897, 5965 |
| CviRI | 28 | 805, 866, 1190, 1406, 1474, 2111, 2120, 2183, 2192, 2307, 2383, 2474, 2633, 2808, 2822, 3434, 3502, 3760, 4249, 4542, 4877, 4967, 5160, 5248, 5492, 5780, 5912, 6034 |
| DdeI | 12 | 853, 929, 1575, 2333, 3246, 4209, 4615, 4781, 5321, 5786, 5856, 5927 |
| DpnI | 33 | 33, 634, 889, 1161, 1309, 1317, 2420, 2425, 2444, 2755, 2833, 2914, 2923, 3001, 3377, 3393, 4501, 4573, 4584, 4592, 4670, 4682, 4787, 5128, 5146, 5192, 5450, 5467, 5503, 5752, 5760, 5768, 6123 |
| DraII | 1 | 1289 |
| DraIII | 2 | 1105, 1845 |
| DrdI | 3 | 1888, 2604, 4036 |
| DsaI | 5 | 408, 659, 1353, 2280, 3015 |
| Eam1105I | 1 | 4819 |
| EciI | 11 | 1579, 3096, 554, 1163, 2232, 2253, 2263, 2274, 4006, 4152, 4977 |
| Eco31I | 2 | 4891, 6112 |
| Eco47III | 1 | 642 |
| Eco57I | 5 | 793, 2708, 3140, 4461, 5506 |
| Eco57MI | 9 | 793, 1324, 2708, 3140, 3402, 4461, 3381, 4909, 5506 |
| EcoNI | 1 | 1281 |
| EcoRII | 20 | 137, 330, 705, 830, 840, 942, 1017, 1071, 2086, 2141, 2158, 2969, 3673, 3961, 4082, 4095, 2394, 2586, 4313, 5357 |
| FalI | 2 | 1147, 2900 |
| FauI | 12 | 133, 159, 326, 1700, 2220, 2241, 3726, 1646, 2713, 3250, 3388, 3783 |
| FnuDII | 22 | 107, 986, 988, 1306, 1618, 1642, 1662, 2038, 2648, 2949, 2981, 3387, 3780, 3782, 3980, 4558, 4888, 5381, 5713, 5866, 5954, 5976 |
| Fnu4HI | 46 | 752, 819, 900, 1184, 1191, 1242, 1245, 1339, 1407, 1629, 1643, 1665, 2320, 2491, 2543, 2554, 2644, 2649, 2686, 2727, 2814, 2817, 2820, 3056, 3152, 3193, 3207, 3321, 3435, 3758, 3839, 3857, 3860, 3978, 4133, 4276, 4341, 4344, 4547, 4875, 5214, 5241, 5336, 5565, 5807, 5947 |
| FokI | 15 | 966, 1059, 1179, 1552, 2437, 2894, 2919, 3373, 702, 939, 1068, 2238, 4804, 4985, 5272 |
| GdiII | 6 | 2489, 3773, 1196, 3054, 3081, 5212 |
| GsuI | 4 | 1324, 3402, 3381, 4909 |
| HaeI | 9 | 662, 732, 1130, 2370, 2663, 3947, 3958, 4410, 3773 |
| HaeII | 8 | 642, 919, 1276, 1688, 1696, 2582, 3808, 4178 |
| HaeIII | 26 | 131, 324, 663, 733, 833, 1131, 1197, 1234, 1854, 1996, 2313, 2319, 2371, 2490, 2664, 3055, 3082, 3774, 3948, 3959, 3977, 4411, 4866, 4946, 5213, 5965 |
| HaeIV | 2 | 2755, 4819 |
| HgaI | 6 | 565, 3284, 3363, 4036, 4611, 5361 |
| HgiAI | 7 | 1, 2692, 2882, 4248, 5406, 5491, 5779 |
| HgiCI | 9 | 7, 513, 696, 1042, 1806, 2582, 2617, 3678, 4772 |
| HgiJII | 5 | 1, 1561, 1597, 1772, 2944 |
| HhaI | 37 | 643, 920, 948, 987, 989, 1277, 1305, 1619, 1632, 1641, 1663, 1689, 1697, 2575, 2583, 2647, 2684, 2950, 2980, 2982, 3210, 3386, 3716, 3781, 3809, 3842, 4112, 4179, 4279, 4453, 4559, 4952, 5045, 5382, 5714, 5865, 5945 |
| Hin4I | 5 | 2755, 4819, 4893, 6123, 2785 |
| HindII | 2 | 3560, 5745 |
| HindIII | 1 | 13 |
| HinfI | 16 | 458, 1023, 1895, 1917, 3068, 3202, 3254, 3312, 3349, 3769, 3834, 3909, 4305, 4819, 5920, 5988 |
| HpaII | 27 | 649, 689, 812, 1040, 1343, 1743, 2395, 2488, 2565, 2587, 2615, 2746, 2836, 2903, 3084, 3359, 3367, 3652, 4141, 4288, 4314, 4504, 4905, 4939, 5006, 5116, 5358 |
| HphI | 15 | 412, 843, 996, 1020, 1149, 1835, 5298, 5539, 686, 1349, 2769, 4675, 4902, 5524, 6060 |
| Hpy99I | 19 | 2669, 2697, 2991, 3006, 3283, 3559, 4035, 4826, 5089, 5744, 5747, 990, 1338, 1341, 1741, 2556, 3192, 3320, 3365 |
| Hpy178III | 27 | 914, 1118, 1157, 1331, 2342, 2427, 2600, 2916, 2925, 3008, 3064, 3108, 3198, 3231, 3300, 3738, 4167, 4301, 4399, 4497, 4577, 4651, 4910, 5659, 5754, 5764, 5953 |
| Hpy188I | 21 | 631, 1574, 1788, 2332, 2417, 2422, 2548, 2892, 3245, 3346, 4046, 4124, 4477, 4608, 4743, 5189, 5200, 5320, 5801, 6120, 6125 |
| KpnI | 1 | 7 |
| Ksp632I | 4 | 3812, 5613, 2932, 3142 |
| MaeI | 12 | 640, 1384, 1480, 1602, 1694, 2374, 3508, 3568, 3572, 4429, 4679, 5014 |
| MaeII | 17 | 170, 182, 223, 306, 387, 492, 1736, 1846, 1889, 1901, 2699, 2886, 4634, 5050, 5423, 5743, 6069 |
| MaeIII | 19 | 110, 197, 546, 844, 1333, 1420, 1658, 1670, 2704, 3010, 3448, 4291, 4354, 4470, 4750, 5081, 5139, 5292, 5480 |
| MboI | 33 | 33, 634, 889, 1161, 1309, 1317, 2420, 2425, 2444, 2755, 2833, 2914, 2923, 3001, 3377, 3393, 4501, 4573, 4584, 4592, 4670, 4682, 4787, 5128, 5146, 5192, 5450, 5467, 5503, 5752, 5760, 5768, 6123 |
| MboII | 17 | 1529, 2932, 3142, 4432, 4581, 5917, 911, 956, 959, 1716, 3242, 3409, 3813, 4672, 5427, 5505, 5614 |
| McrI | 6 | 650, 2489, 3847, 4271, 5191, 5340 |
| MfeI | 1 | 5908 |
| MluI | 1 | 5975 |
| MmeI | 4 | 4124, 4308, 1891, 5845 |
| MnlI | 39 | 39, 1810, 2324, 2330, 3174, 3380, 3565, 3823, 4106, 4981, 5187, 6018, 596, 676, 757, 763, 931, 964, 994, 1006, 1057, 1177, 1379, 1577, 2311, 2317, 2354, 2357, 2369, 2441, 2505, 2641, 2998, 3790, 4049, 4373, 4770, 4851, 5849 |
| MseI | 21 | 17, 23, 1637, 1908, 2006, 2023, 2034, 2044, 3705, 3764, 4637, 4689, 4694, 4708, 4761, 4996, 5035, 5400, 5816, 5878, 5981 |
| MslI | 11 | 409, 687, 702, 837, 1143, 1518, 3016, 5072, 5231, 5590, 6064 |
| MstI | 2 | 2683, 5044 |
| MwoI | 42 | 132, 254, 286, 325, 418, 442, 655, 746, 752, 806, 819, 863, 872, 1547, 1571, 1632, 1634, 1676, 1703, 1733, 2112, 2184, 2235, 2314, 2320, 2568, 2652, 2675, 2814, 2820, 2937, 2973, 3020, 3287, 3672, 3716, 3800, 3867, 3981, 4550, 4938, 5938 |
| NaeI | 4 | 1342, 1742, 3083, 3366 |
| NarI | 1 | 2582 |
| NcoI | 4 | 408, 659, 2280, 3015 |
| NdeI | 1 | 281 |
| NheI | 1 | 639 |
| NlaIII | 30 | 349, 409, 660, 894, 924, 1119, 1314, 1359, 1518, 1544, 2118, 2190, 2281, 2454, 2799, 2985, 3016, 3042, 3398, 3546, 3589, 3935, 4652, 5143, 5153, 5231, 5267, 5660, 5914, 6036 |
| NlaIV | 21 | 7, 513, 696, 1042, 1290, 1773, 1785, 1806, 2089, 2161, 2582, 2617, 3678, 3964, 4003, 4772, 4866, 4907, 5118, 5708, 6122 |
| NruI | 1 | 5953 |
| NspI | 6 | 1543, 2117, 2189, 2984, 3934, 6035 |
| NspBII | 8 | 28, 1192, 1591, 2687, 3756, 4274, 4519, 5457 |
| OliI | 2 | 687, 837 |
| PflMI | 1 | 1353 |
| PfoI | 2 | 941, 3358 |
| PleI | 8 | 1895, 4305, 458, 1917, 3254, 3834, 4819, 5988 |
| PmeI | 1 | 21 |
| PpiI | 5 | 4622, 676, 994, 1895, 5465 |
| PpuMI | 1 | 1289 |
| PsiI | 4 | 1412, 1973, 3440, 6097 |
| PstI | 1 | 2632 |
| PvuI | 1 | 5191 |
| PvuII | 4 | 1192, 1591, 2687, 3756 |
| RleAI | 2 | 1103, 1524 |
| RsaI | 14 | 8, 266, 291, 346, 379, 430, 587, 1089, 1113, 1371, 2888, 5303, 5790, 5960 |
| RsrII | 1 | 3098 |
| SacI | 1 | 1 |
| SalI | 2 | 3560, 5745 |
| SapI | 3 | 3811, 2932, 3142 |
| SauI | 1 | 928 |
| ScaI | 1 | 5302 |
| ScrFI | 24 | 137, 330, 705, 830, 840, 942, 1017, 1071, 2086, 2141, 2158, 2394, 2395, 2586, 2746, 2969, 3359, 3673, 3961, 4082, 4095, 4313, 5006, 5357 |
| SduI | 15 | 1, 697, 826, 1561, 1597, 1772, 2525, 2618, 2692, 2882, 2944, 4248, 5406, 5491, 5779 |
| SecI | 19 | 408, 659, 829, 839, 992, 1016, 1071, 1286, 1353, 2085, 2157, 2280, 2315, 2373, 2394, 2746, 3015, 3673, 4094 |
| SexAI | 2 | 2140, 4312 |
| SfaNI | 21 | 1028, 1142, 1346, 1438, 2121, 2193, 2873, 2937, 3212, 3466, 4022, 5071, 5511, 415, 769, 1553, 2551, 2806, 3022, 5281, 5804 |
| SfeI | 6 | 1624, 2632, 4199, 4390, 5065, 5994 |
| SgrAI | 1 | 687 |
| SimI | 9 | 74, 4605, 155, 789, 1291, 1814, 3012, 4127, 4893 |
| SmaI | 1 | 2394 |
| SmlI | 6 | 16, 2974, 4040, 4302, 4576, 5444 |
| SnaBI | 1 | 386 |
| SphI | 4 | 1543, 2117, 2189, 2984 |
| SspI | 1 | 5626 |
| Sth132I | 45 | 133, 159, 326, 886, 1249, 1700, 1752, 2220, 2241, 2394, 2586, 2989, 3128, 3199, 3726, 4061, 4260, 4269, 4313, 4824, 5357, 5725, 5765, 72, 464, 527, 1647, 1769, 2396, 2672, 2714, 2747, 3251, 3360, 3389, 3739, 3784, 4168, 4603, 4848, 5007, 5370, 5431, 5755, 5963 |
| StuI | 1 | 2370 |
| StyI | 9 | 408, 659, 1286, 2280, 2373, 3015, 1353, 2085, 2157 |
| TaqI | 17 | 41, 962, 1004, 1031, 1175, 1812, 2696, 2852, 2876, 2912, 3074, 3265, 3310, 3561, 4034, 5475, 5746 |
| TatI | 9 | 265, 345, 378, 429, 1088, 1112, 1370, 5302, 5789 |
| TauI | 21 | 752, 1339, 1629, 1643, 2320, 2491, 2554, 2649, 2814, 2817, 3056, 3152, 3193, 3321, 3860, 3978, 4133, 5214, 5336, 5565, 5807 |
| TfiI | 14 | 1023, 3068, 3202, 3312, 3349, 3769, 3909, 5920, 458, 1917, 3254, 3834, 4819, 5988 |
| TseI | 37 | 819, 900, 1184, 1191, 1242, 1245, 1407, 1665, 2543, 2644, 2686, 2727, 2820, 3207, 3435, 3758, 3839, 3857, 4276, 4341, 4344, 4547, 4875, 5241, 5947, 1339, 2320, 2491, 2554, 3056, 3193, 3321, 3978, 4133, 5214, 5565, 5807 |
| Tsp45I | 7 | 844, 1333, 1670, 2704, 3010, 5081, 5292 |
| Tsp4CI | 16 | 44, 122, 244, 315, 589, 627, 1871, 2961, 3077, 3185, 3557, 3896, 3967, 4437, 4747, 5262 |
| TspDTI | 11 | 895, 2627, 3331, 3767, 4700, 5915, 84, 799, 3070, 4802, 5105 |
| TspEI | 18 | 67, 1446, 2031, 2042, 2046, 2128, 2200, 2292, 3474, 3615, 3632, 3707, 4692, 4998, 5253, 5875, 5909, 6012 |
| TspGWI | 3 | 5591, 5749, 5274 |
| TspRI | 26 | 868, 1471, 2706, 3499, 3721, 3830, 4336, 4349, 4617, 4766, 4871, 5218, 5245, 866, 1469, 2704, 3497, 3719, 3828, 4334, 4347, 4615, 4764, 4869, 5216, 5243 |
| Tth111I | 1 | 2698 |
| Tth111II | 5 | 4508, 4544, 3028, 4538, 5836 |
| VspI | 4 | 2043, 3704, 3763, 4995 |
| XhoII | 14 | 633, 1160, 2419, 2754, 3000, 3392, 4572, 4583, 4669, 4681, 5449, 5466, 5759, 6122 |
| XmaIII | 1 | 2489 |
| XmnI | 2 | 2041, 5419 |
