| Name | Freq | Positions |
|---|
| AatII | 5 | 121, 174, 257, 443, 4938 |
| AccI | 3 | 2749, 2756, 4941 |
| AceIII | 4 | 3070, 4307, 564, 1211 |
| AciI | 69 | 58, 86, 98, 112, 279, 507, 618, 703, 870, 897, 1417, 1429, 1438, 1450, 1460, 1471, 1517, 1688, 1751, 2253, 2298, 2364, 2390, 2515, 2518, 2820, 2923, 3013, 3175, 3203, 3330, 3349, 3470, 3715, 4083, 4174, 4411, 4576, 4653, 4762, 4908, 5004, 370, 403, 528, 699, 752, 776, 825, 839, 842, 1845, 1909, 2010, 2013, 2293, 2348, 2446, 2584, 2979, 2989, 3056, 3063, 3084, 3580, 3724, 4365, 4532, 4861 |
| AclI | 2 | 4245, 4618 |
| AcyI | 9 | 121, 174, 257, 443, 1778, 2480, 2559, 4556, 4938 |
| AflIII | 2 | 3130, 5171 |
| AhaIII | 3 | 3884, 3903, 4595 |
| AlfI | 2 | 1298, 1370 |
| AloI | 2 | 577, 1090 |
| AluI | 25 | 565, 645, 788, 955, 1212, 1532, 1586, 1596, 1884, 2342, 2633, 2766, 2772, 2794, 2889, 2953, 3071, 3297, 3387, 3433, 3690, 4208, 4308, 4371, 5077 |
| AlwNI | 2 | 3541, 5018 |
| ApaBI | 2 | 1308, 1380 |
| ApaLI | 3 | 3444, 4687, 4975 |
| ApoI | 3 | 1226, 2669, 5070 |
| AsuI | 9 | 83, 276, 1049, 2295, 4062, 4141, 4158, 4380, 5160 |
| AsuII | 1 | 2460 |
| AvaI | 1 | 1590 |
| AvaII | 6 | 2295, 4158, 4380, 83, 276, 4062 |
| AvrII | 1 | 1569 |
| BalI | 1 | 1859 |
| BamHI | 1 | 584 |
| BbvI | 18 | 861, 1840, 1882, 2403, 2631, 3537, 3540, 3743, 4437, 1739, 1923, 2016, 2954, 3035, 3053, 3472, 4071, 5143 |
| BbvII | 1 | 725 |
| BccI | 10 | 1052, 1433, 1991, 2493, 4056, 4180, 4467, 1034, 1663, 2091 |
| Bce83I | 5 | 3498, 2170, 3236, 3772, 4640 |
| BcefI | 4 | 1000, 2189, 3616, 1753 |
| BcgI | 1 | 4536 |
| BciVI | 4 | 805, 1987, 3339, 4863 |
| BclI | 1 | 1620 |
| BetI | 6 | 1810, 3336, 3483, 4311, 4100, 4553 |
| BfiI | 4 | 1718, 294, 1453, 4065 |
| BglI | 4 | 84, 206, 277, 4134 |
| BglII | 1 | 4955 |
| BinI | 21 | 584, 656, 674, 1615, 1639, 1950, 2196, 2588, 3768, 3865, 4645, 4947, 585, 2029, 2573, 3697, 3780, 3878, 4342, 4663, 4964 |
| BplI | 2 | 1513, 2444 |
| Bpu10I | 1 | 5122 |
| BsaAI | 3 | 338, 1041, 2081 |
| BsaBI | 1 | 1634 |
| BsaXI | 2 | 1090, 2983 |
| BseMII | 9 | 3405, 3811, 3977, 4982, 771, 1529, 2442, 4517, 5052 |
| BsePI | 1 | 2176 |
| BseRI | 1 | 1550 |
| BseSI | 5 | 1721, 1814, 3444, 4687, 4975 |
| BseYI | 6 | 1290, 1362, 743, 789, 2283, 3434 |
| BsiI | 4 | 2497, 2371, 3303, 4684 |
| BsiYI | 12 | 43, 818, 1144, 1471, 1754, 2298, 2579, 2972, 3146, 3164, 3330, 3609 |
| BsmI | 1 | 2699 |
| BsmAI | 4 | 429, 4852, 1627, 4087 |
| Bsp24I | 4 | 266, 2559, 3807, 4932 |
| BspHI | 2 | 3847, 4855 |
| BspLU11I | 1 | 3130 |
| BspMI | 3 | 2038, 2488, 1675 |
| BsrI | 15 | 1127, 1718, 1919, 3533, 3546, 4491, 295, 1454, 2930, 3663, 4066, 4184, 4227, 4666, 5017 |
| BsrBI | 6 | 897, 2390, 2820, 2444, 3061, 4859 |
| BsrDI | 3 | 2005, 4074, 4256 |
| BtgZI | 6 | 2216, 5151, 349, 1053, 2065, 2409 |
| BtsI | 4 | 4413, 2695, 2917, 4441 |
| Cac8I | 30 | 84, 277, 735, 739, 881, 895, 938, 1294, 1313, 1366, 1385, 1671, 1857, 2076, 2142, 2148, 2176, 2180, 2221, 2225, 2279, 2562, 2921, 2950, 3059, 3145, 3182, 3739, 4130, 5063 |
| CauII | 8 | 1590, 1591, 1782, 1942, 2555, 3509, 4202, 4553 |
| CdiI | 10 | 349, 1053, 2065, 2070, 2268, 2409, 4268, 2217, 4672, 5152 |
| CfrI | 7 | 700, 1685, 1859, 2250, 2277, 2969, 4408 |
| Cfr10I | 5 | 938, 2098, 2279, 2562, 4100 |
| CjeI | 11 | 1539, 3157, 3712, 4932, 74, 267, 1336, 2560, 3633, 3711, 3808 |
| CjePI | 10 | 621, 3663, 4932, 266, 599, 2559, 3807, 3927, 4399, 4964 |
| CspCI | 1 | 388 |
| CstMI | 2 | 900, 4373 |
| CviJI | 93 | 41, 83, 92, 276, 565, 645, 701, 758, 766, 788, 794, 941, 955, 969, 1050, 1192, 1212, 1285, 1357, 1480, 1509, 1515, 1532, 1555, 1567, 1573, 1586, 1596, 1686, 1703, 1711, 1738, 1763, 1847, 1856, 1860, 1884, 1922, 1998, 2015, 2034, 2097, 2141, 2151, 2168, 2251, 2278, 2282, 2319, 2342, 2358, 2538, 2565, 2633, 2766, 2772, 2794, 2846, 2867, 2889, 2953, 2970, 3052, 3071, 3144, 3155, 3173, 3199, 3297, 3387, 3433, 3438, 3463, 3542, 3607, 3618, 3661, 3690, 4050, 4062, 4103, 4129, 4133, 4142, 4208, 4298, 4308, 4371, 4409, 5015, 5077, 5093, 5161 |
| CviRI | 22 | 1307, 1316, 1379, 1388, 1503, 1579, 1670, 1829, 2004, 2018, 2630, 2698, 2956, 3445, 3738, 4073, 4163, 4356, 4444, 4688, 4976, 5108 |
| DdeI | 10 | 771, 1529, 2442, 3405, 3811, 3977, 4517, 4982, 5052, 5123 |
| DpnI | 29 | 585, 657, 675, 1616, 1621, 1640, 1951, 2029, 2110, 2119, 2197, 2573, 2589, 3697, 3769, 3780, 3788, 3866, 3878, 3983, 4324, 4342, 4388, 4646, 4663, 4699, 4948, 4956, 4964 |
| DraIII | 1 | 1041 |
| DrdI | 3 | 1084, 1800, 3232 |
| DsaI | 4 | 360, 580, 1476, 2211 |
| Eam1105I | 1 | 4015 |
| EciI | 11 | 775, 2292, 506, 617, 1428, 1449, 1459, 1470, 3202, 3348, 4173 |
| Eco31I | 1 | 4087 |
| Eco57I | 4 | 1904, 2336, 3657, 4702 |
| Eco57MI | 7 | 1904, 2336, 2598, 3657, 2577, 4105, 4702 |
| EcoRII | 14 | 89, 282, 1282, 1337, 1354, 2165, 2869, 3157, 3278, 3291, 1590, 1782, 3509, 4553 |
| EcoRV | 1 | 613 |
| FalI | 1 | 2096 |
| FauI | 12 | 85, 111, 278, 896, 1416, 1437, 2922, 842, 1909, 2446, 2584, 2979 |
| FnuDII | 19 | 59, 814, 838, 858, 1234, 1844, 2145, 2177, 2583, 2976, 2978, 3176, 3754, 4084, 4577, 4909, 5062, 5150, 5172 |
| Fnu4HI | 39 | 699, 702, 825, 839, 861, 1516, 1687, 1739, 1750, 1840, 1845, 1882, 1923, 2010, 2013, 2016, 2252, 2348, 2389, 2403, 2517, 2631, 2954, 3035, 3053, 3056, 3174, 3329, 3472, 3537, 3540, 3743, 4071, 4410, 4437, 4532, 4761, 5003, 5143 |
| FokI | 9 | 748, 1633, 2090, 2115, 2569, 1434, 4000, 4181, 4468 |
| GdiII | 6 | 700, 1685, 2969, 2250, 2277, 4408 |
| GsuI | 3 | 2598, 2577, 4105 |
| HaeI | 6 | 1566, 1859, 3143, 3154, 3606, 2969 |
| HaeII | 5 | 884, 892, 1778, 3004, 3374 |
| HaeIII | 21 | 83, 276, 701, 1050, 1192, 1509, 1515, 1567, 1686, 1860, 2251, 2278, 2970, 3144, 3155, 3173, 3607, 4062, 4142, 4409, 5161 |
| HaeIV | 2 | 1951, 4015 |
| HgaI | 6 | 517, 2480, 2559, 3232, 3807, 4557 |
| HgiAI | 11 | 1888, 2078, 3444, 4602, 4687, 4975, 815, 885, 893, 1779, 4910 |
| HgiCI | 6 | 465, 1002, 1778, 1813, 2874, 3968 |
| HgiJII | 4 | 757, 793, 968, 2140 |
| HhaI | 30 | 815, 828, 837, 859, 885, 893, 1771, 1779, 1843, 1880, 2146, 2176, 2178, 2406, 2582, 2912, 2977, 3005, 3038, 3308, 3375, 3475, 3649, 3755, 4148, 4241, 4578, 4910, 5061, 5141 |
| Hin4I | 4 | 1951, 4015, 4089, 1981 |
| HindII | 3 | 2756, 4941, 5175 |
| HindIII | 1 | 644 |
| HinfI | 16 | 410, 599, 628, 1091, 1113, 2264, 2398, 2450, 2508, 2545, 2965, 3030, 3105, 3501, 4015, 5116 |
| HpaII | 22 | 939, 1591, 1684, 1761, 1783, 1811, 1942, 2032, 2099, 2280, 2555, 2563, 2848, 3337, 3484, 3510, 3700, 4101, 4135, 4202, 4312, 4554 |
| HphI | 8 | 364, 1031, 4494, 4735, 1965, 3871, 4098, 4720 |
| Hpy99I | 17 | 639, 1865, 1893, 2187, 2202, 2479, 2755, 3231, 4022, 4285, 4940, 4943, 937, 1752, 2388, 2516, 2561 |
| Hpy178III | 24 | 721, 1538, 1623, 1796, 2112, 2121, 2204, 2260, 2304, 2394, 2427, 2496, 2934, 3363, 3497, 3595, 3693, 3773, 3847, 4106, 4855, 4950, 4960, 5149 |
| Hpy188I | 20 | 602, 625, 770, 984, 1528, 1613, 1618, 1744, 2088, 2441, 2542, 3242, 3320, 3673, 3804, 3939, 4385, 4396, 4516, 4997 |
| Ksp632I | 4 | 3008, 4809, 2128, 2338 |
| MaeI | 11 | 722, 798, 890, 1570, 2704, 2764, 2768, 3625, 3875, 4210, 5193 |
| MaeII | 16 | 122, 134, 175, 258, 339, 444, 932, 1042, 1085, 1097, 1895, 2082, 3830, 4246, 4619, 4939 |
| MaeIII | 16 | 62, 149, 498, 854, 866, 1900, 2206, 2644, 3487, 3550, 3666, 3946, 4277, 4335, 4488, 4676 |
| MboI | 29 | 585, 657, 675, 1616, 1621, 1640, 1951, 2029, 2110, 2119, 2197, 2573, 2589, 3697, 3769, 3780, 3788, 3866, 3878, 3983, 4324, 4342, 4388, 4646, 4663, 4699, 4948, 4956, 4964 |
| MboII | 14 | 725, 2128, 2338, 3628, 3777, 5113, 912, 2438, 2605, 3009, 3868, 4623, 4701, 4810 |
| McrI | 6 | 700, 1685, 3043, 3467, 4387, 4536 |
| MfeI | 1 | 5104 |
| MluI | 1 | 5171 |
| MmeI | 4 | 3320, 3504, 1087, 5041 |
| MnlI | 29 | 588, 707, 1006, 1520, 1526, 2370, 2576, 2761, 3019, 3302, 4177, 4383, 548, 773, 1507, 1513, 1550, 1553, 1565, 1637, 1701, 1837, 2194, 2986, 3245, 3569, 3966, 4047, 5045 |
| MseI | 20 | 7, 648, 833, 1104, 1202, 1219, 1230, 1240, 2901, 2960, 3833, 3885, 3890, 3904, 3957, 4192, 4231, 4596, 5012, 5074 |
| MslI | 5 | 361, 2212, 4268, 4427, 4786 |
| MstI | 2 | 1879, 4240 |
| MwoI | 35 | 84, 206, 238, 277, 370, 394, 743, 767, 828, 830, 872, 899, 929, 1308, 1380, 1431, 1510, 1516, 1764, 1848, 1871, 2010, 2016, 2133, 2169, 2216, 2483, 2868, 2912, 2996, 3063, 3177, 3746, 4134, 5134 |
| NaeI | 3 | 938, 2279, 2562 |
| NarI | 1 | 1778 |
| NcoI | 3 | 360, 1476, 2211 |
| NdeI | 1 | 233 |
| NlaIII | 22 | 301, 361, 740, 1314, 1386, 1477, 1650, 1995, 2181, 2212, 2238, 2594, 2742, 2785, 3131, 3848, 4339, 4349, 4427, 4463, 4856, 5110 |
| NlaIV | 17 | 465, 584, 969, 981, 1002, 1285, 1357, 1778, 1813, 2874, 3160, 3199, 3968, 4062, 4103, 4314, 4904 |
| NotI | 1 | 699 |
| NruI | 1 | 5149 |
| NspI | 5 | 739, 1313, 1385, 2180, 3130 |
| NspBII | 6 | 787, 1883, 2952, 3470, 3715, 4653 |
| PfoI | 1 | 2554 |
| PleI | 7 | 1091, 3501, 410, 1113, 2450, 3030, 4015 |
| PpiI | 3 | 3818, 1091, 4661 |
| PsiI | 2 | 1169, 2636 |
| PstI | 1 | 1828 |
| PvuI | 1 | 4387 |
| PvuII | 3 | 787, 1883, 2952 |
| RsaI | 10 | 218, 243, 298, 331, 382, 539, 2084, 4499, 4986, 5156 |
| RsrII | 1 | 2294 |
| SalI | 2 | 2756, 4941 |
| SapI | 3 | 3007, 2128, 2338 |
| ScaI | 1 | 4498 |
| ScrFI | 18 | 89, 282, 1282, 1337, 1354, 1590, 1591, 1782, 1942, 2165, 2555, 2869, 3157, 3278, 3291, 3509, 4202, 4553 |
| SduI | 12 | 757, 793, 968, 1721, 1814, 1888, 2078, 2140, 3444, 4602, 4687, 4975 |
| SecI | 12 | 360, 580, 1281, 1353, 1476, 1511, 1569, 1590, 1942, 2211, 2869, 3290 |
| SexAI | 2 | 1336, 3508 |
| SfaNI | 16 | 1317, 1389, 2069, 2133, 2408, 2662, 3218, 4267, 4707, 367, 749, 1747, 2002, 2218, 4477, 5000 |
| SfeI | 5 | 820, 1828, 3395, 3586, 4261 |
| SimI | 7 | 26, 3801, 107, 1010, 2208, 3323, 4089 |
| SmaI | 1 | 1590 |
| SmlI | 5 | 2170, 3236, 3498, 3772, 4640 |
| SnaBI | 1 | 338 |
| SpeI | 1 | 5192 |
| SphI | 4 | 739, 1313, 1385, 2180 |
| SspI | 1 | 4822 |
| Sth132I | 41 | 85, 111, 278, 896, 948, 1416, 1437, 1590, 1782, 2185, 2324, 2395, 2922, 3257, 3456, 3465, 3509, 4020, 4553, 4921, 4961, 479, 843, 965, 1592, 1868, 1910, 1943, 2447, 2556, 2585, 2935, 2980, 3364, 3799, 4044, 4203, 4566, 4627, 4951, 5159 |
| StuI | 1 | 1566 |
| StyI | 6 | 360, 1476, 1569, 2211, 1281, 1353 |
| TaqI | 13 | 709, 1008, 1892, 2048, 2072, 2108, 2270, 2461, 2506, 2757, 3230, 4671, 4942 |
| TatI | 6 | 217, 297, 330, 381, 4498, 4985 |
| TauI | 21 | 699, 702, 825, 839, 1516, 1687, 1750, 1845, 2010, 2013, 2252, 2348, 2389, 2517, 3056, 3174, 3329, 4410, 4532, 4761, 5003 |
| TfiI | 14 | 599, 628, 2264, 2398, 2508, 2545, 2965, 3105, 5116, 410, 1113, 2450, 3030, 4015 |
| TseI | 30 | 861, 1739, 1840, 1882, 1923, 2016, 2403, 2631, 2954, 3035, 3053, 3472, 3537, 3540, 3743, 4071, 4437, 5143, 702, 1516, 1687, 1750, 2252, 2389, 2517, 3174, 3329, 4410, 4761, 5003 |
| Tsp45I | 5 | 866, 1900, 2206, 4277, 4488 |
| Tsp4CI | 16 | 74, 196, 267, 541, 579, 712, 1067, 2157, 2273, 2381, 2753, 3092, 3163, 3633, 3943, 4458 |
| TspDTI | 10 | 1823, 2527, 2963, 3896, 5111, 36, 668, 2266, 3998, 4301 |
| TspEI | 16 | 19, 1227, 1238, 1242, 1324, 1396, 1488, 2670, 2811, 2828, 2903, 3888, 4194, 4449, 5071, 5105 |
| TspGWI | 3 | 4787, 4945, 4470 |
| TspRI | 22 | 1902, 2695, 2917, 3026, 3532, 3545, 3813, 3962, 4067, 4414, 4441, 1900, 2693, 2915, 3024, 3530, 3543, 3811, 3960, 4065, 4412, 4439 |
| Tth111I | 1 | 1894 |
| Tth111II | 5 | 3704, 3740, 2224, 3734, 5032 |
| VspI | 5 | 6, 1239, 2900, 2959, 4191 |
| XbaI | 1 | 721 |
| XhoII | 14 | 584, 656, 674, 1615, 1950, 2196, 2588, 3768, 3779, 3865, 3877, 4645, 4662, 4955 |
| XmaIII | 2 | 700, 1685 |
| XmnI | 2 | 1237, 4615 |
