| Name | Freq | Positions |
|---|
| AatII | 6 | 121, 174, 257, 443, 1658, 5109 |
| AccI | 3 | 2920, 2927, 5112 |
| AceIII | 6 | 1713, 3241, 4478, 564, 1213, 2172 |
| AciI | 74 | 58, 86, 98, 112, 279, 507, 620, 705, 872, 899, 1419, 1431, 1440, 1452, 1462, 1473, 1519, 1654, 1843, 1910, 1960, 2046, 2261, 2412, 2435, 2564, 2686, 2689, 2991, 3094, 3184, 3346, 3374, 3501, 3520, 3641, 3886, 4254, 4345, 4582, 4747, 4824, 4933, 5079, 5175, 370, 403, 528, 701, 754, 778, 827, 841, 844, 1778, 1980, 2004, 2026, 2223, 2271, 2384, 2414, 2574, 2755, 3150, 3160, 3227, 3234, 3255, 3751, 3895, 4536, 4703, 5032 |
| AclI | 2 | 4416, 4789 |
| AcyI | 9 | 121, 174, 257, 443, 1658, 2626, 2730, 4727, 5109 |
| AflIII | 2 | 3301, 5342 |
| AhaIII | 3 | 4055, 4074, 4766 |
| AlfI | 2 | 1300, 1372 |
| AloI | 2 | 577, 1092 |
| AluI | 30 | 565, 647, 790, 957, 1214, 1534, 1588, 1598, 1714, 1746, 1788, 2173, 2398, 2463, 2492, 2804, 2937, 2943, 2965, 3060, 3124, 3242, 3468, 3558, 3604, 3861, 4379, 4479, 4542, 5248 |
| AlwNI | 2 | 3712, 5189 |
| ApaBI | 4 | 1310, 1382, 1934, 2210 |
| ApaLI | 5 | 1915, 2217, 3615, 4858, 5146 |
| ApoI | 4 | 1228, 1878, 2840, 5241 |
| AsuI | 12 | 83, 276, 1051, 2034, 2043, 2185, 2584, 4233, 4312, 4329, 4551, 5331 |
| AvaI | 1 | 1592 |
| AvaII | 8 | 2043, 2584, 4329, 4551, 83, 276, 2034, 4233 |
| AvrII | 1 | 1571 |
| BalI | 1 | 1184 |
| BamHI | 1 | 584 |
| BbvI | 18 | 863, 1712, 1970, 2363, 2490, 2802, 3708, 3711, 3914, 4608, 1789, 2001, 3125, 3206, 3224, 3643, 4242, 5314 |
| BbvII | 1 | 727 |
| BccI | 9 | 1054, 1435, 4227, 4351, 4638, 1036, 1797, 2129, 2589 |
| Bce83I | 4 | 3669, 3407, 3943, 4811 |
| BcefI | 6 | 1002, 2473, 3787, 1912, 2342, 2577 |
| BcgI | 1 | 4707 |
| BciVI | 3 | 807, 3510, 5034 |
| BclI | 1 | 1622 |
| BetI | 8 | 1856, 2393, 2529, 3507, 3654, 4482, 4271, 4724 |
| BfiI | 3 | 294, 1455, 4236 |
| BglI | 5 | 84, 206, 277, 1186, 4305 |
| BglII | 1 | 5126 |
| BinI | 20 | 584, 658, 676, 1617, 2406, 2759, 3939, 4036, 4816, 5118, 585, 2100, 2527, 2744, 3868, 3951, 4049, 4513, 4834, 5135 |
| BplI | 1 | 1515 |
| Bpu10I | 1 | 5293 |
| BsaAI | 4 | 338, 1043, 1629, 2661 |
| BsaXI | 3 | 1693, 1092, 3154 |
| BseMII | 8 | 3576, 3982, 4148, 5153, 773, 1531, 4688, 5223 |
| BseRI | 1 | 1552 |
| BseSI | 5 | 1915, 2217, 3615, 4858, 5146 |
| BseYI | 6 | 1292, 1364, 2631, 745, 791, 3605 |
| BsiI | 4 | 1735, 2214, 3474, 4855 |
| BsiYI | 15 | 43, 820, 1146, 1473, 1850, 1913, 2200, 2309, 2530, 2750, 3143, 3317, 3335, 3501, 3780 |
| BsmI | 1 | 2870 |
| BsmAI | 4 | 429, 1698, 5023, 4258 |
| Bsp24I | 6 | 266, 2249, 2730, 3978, 2632, 5103 |
| BspHI | 2 | 4018, 5026 |
| BspLU11I | 1 | 3301 |
| BspMI | 1 | 1939 |
| BspMII | 3 | 1856, 2393, 2529 |
| BsrI | 15 | 1129, 2116, 2281, 3704, 3717, 4662, 295, 1456, 3101, 3834, 4237, 4355, 4398, 4837, 5188 |
| BsrBI | 6 | 899, 2991, 2024, 2382, 3232, 5030 |
| BsrDI | 2 | 4245, 4427 |
| BtgZI | 4 | 2292, 5322, 349, 1055 |
| BtsI | 4 | 4584, 2866, 3088, 4612 |
| Cac8I | 25 | 84, 277, 737, 741, 883, 897, 940, 1296, 1315, 1368, 1387, 1958, 2159, 2219, 2399, 2562, 2733, 3092, 3121, 3230, 3316, 3353, 3910, 4301, 5234 |
| CauII | 8 | 1592, 1593, 2420, 2536, 2726, 3680, 4373, 4724 |
| CdiI | 13 | 349, 1055, 1837, 4439, 1751, 1796, 2168, 2293, 2483, 2508, 2588, 4843, 5323 |
| CfrI | 8 | 702, 1184, 1840, 2005, 2258, 2575, 3140, 4579 |
| Cfr10I | 4 | 940, 1973, 2733, 4271 |
| CjeI | 14 | 1541, 2632, 3328, 3883, 5103, 74, 267, 1338, 2065, 2250, 2731, 3804, 3882, 3979 |
| CjePI | 13 | 623, 2632, 3834, 5103, 266, 601, 2249, 2487, 2730, 3978, 4098, 4570, 5135 |
| CspCI | 1 | 388 |
| CstMI | 2 | 902, 4544 |
| CviJI | 96 | 41, 83, 92, 276, 565, 647, 703, 760, 768, 790, 796, 943, 957, 971, 1052, 1185, 1194, 1214, 1287, 1359, 1482, 1511, 1517, 1534, 1557, 1569, 1575, 1588, 1598, 1642, 1714, 1746, 1788, 1841, 1890, 1972, 1985, 2006, 2016, 2034, 2162, 2173, 2186, 2232, 2259, 2341, 2351, 2398, 2416, 2463, 2492, 2534, 2576, 2592, 2709, 2736, 2804, 2937, 2943, 2965, 3017, 3038, 3060, 3124, 3141, 3223, 3242, 3315, 3326, 3344, 3370, 3468, 3558, 3604, 3609, 3634, 3713, 3778, 3789, 3832, 3861, 4221, 4233, 4274, 4300, 4304, 4313, 4379, 4469, 4479, 4542, 4580, 5186, 5248, 5264, 5332 |
| CviRI | 27 | 1309, 1318, 1381, 1390, 1505, 1581, 1711, 1835, 1902, 1916, 1933, 1969, 2218, 2402, 2489, 2801, 2869, 3127, 3616, 3909, 4244, 4334, 4527, 4615, 4859, 5147, 5279 |
| DdeI | 10 | 773, 1531, 2013, 3576, 3982, 4148, 4688, 5153, 5223, 5294 |
| DpnI | 30 | 585, 659, 677, 1618, 1623, 1679, 1812, 1997, 2010, 2100, 2407, 2527, 2744, 2760, 3868, 3940, 3951, 3959, 4037, 4049, 4154, 4495, 4513, 4559, 4817, 4834, 4870, 5119, 5127, 5135 |
| DraIII | 3 | 1043, 1918, 2211 |
| DrdI | 4 | 1086, 2133, 2514, 3403 |
| DsaI | 6 | 360, 580, 1478, 1987, 2343, 2412 |
| Eam1105I | 1 | 4186 |
| EciI | 10 | 777, 506, 619, 1430, 1451, 1461, 1472, 3373, 3519, 4344 |
| Eco31I | 1 | 4258 |
| Eco57I | 2 | 3828, 4873 |
| Eco57MI | 7 | 2282, 2336, 2769, 3828, 2748, 4276, 4873 |
| EcoRI | 1 | 1878 |
| EcoRII | 12 | 89, 282, 1284, 1339, 1356, 3040, 3328, 3449, 3462, 1592, 3680, 4724 |
| EcoRV | 1 | 615 |
| Esp3I | 1 | 1697 |
| FauI | 15 | 85, 111, 278, 898, 1418, 1439, 1909, 1959, 2563, 3093, 844, 1778, 2026, 2755, 3150 |
| FnuDII | 25 | 59, 816, 840, 860, 1236, 1655, 1844, 1979, 2090, 2156, 2222, 2371, 2413, 2573, 2754, 3147, 3149, 3347, 3925, 4255, 4748, 5080, 5233, 5321, 5343 |
| Fnu4HI | 37 | 701, 704, 827, 841, 863, 1518, 1712, 1789, 1842, 1970, 2001, 2004, 2260, 2363, 2411, 2414, 2490, 2574, 2688, 2802, 3125, 3206, 3224, 3227, 3345, 3500, 3643, 3708, 3711, 3914, 4242, 4581, 4608, 4703, 4932, 5174, 5314 |
| FokI | 8 | 750, 1991, 2740, 1436, 2391, 4171, 4352, 4639 |
| GdiII | 7 | 702, 1840, 2005, 2575, 3140, 2258, 4579 |
| GsuI | 5 | 2282, 2336, 2769, 2748, 4276 |
| HaeI | 8 | 1184, 1568, 1984, 3314, 3325, 3777, 2033, 3140 |
| HaeII | 4 | 886, 894, 3175, 3545 |
| HaeIII | 26 | 83, 276, 703, 1052, 1185, 1194, 1511, 1517, 1569, 1841, 1985, 2006, 2034, 2186, 2259, 2341, 2576, 3141, 3315, 3326, 3344, 3778, 4233, 4313, 4580, 5332 |
| HaeIV | 2 | 2093, 4186 |
| HgaI | 10 | 517, 2369, 2514, 2626, 2730, 3403, 3978, 1696, 2148, 4728 |
| HgiAI | 10 | 1915, 2217, 3615, 4773, 4858, 5146, 817, 887, 895, 5081 |
| HgiCI | 5 | 465, 1004, 2209, 3045, 4139 |
| HgiJII | 3 | 759, 795, 970 |
| HhaI | 29 | 817, 830, 839, 861, 887, 895, 1792, 1845, 2089, 2157, 2372, 2499, 2572, 2753, 3083, 3148, 3176, 3209, 3479, 3546, 3646, 3820, 3926, 4319, 4412, 4749, 5081, 5232, 5312 |
| Hin4I | 5 | 1692, 2093, 2226, 4186, 4260 |
| HindII | 4 | 2469, 2927, 5112, 5346 |
| HindIII | 1 | 646 |
| HinfI | 17 | 410, 601, 630, 1093, 1115, 1731, 1853, 2053, 2304, 2679, 2716, 3136, 3201, 3276, 3672, 4186, 5287 |
| HpaII | 21 | 941, 1593, 1857, 1974, 2207, 2394, 2420, 2530, 2536, 2726, 2734, 3019, 3508, 3655, 3681, 3871, 4272, 4306, 4373, 4483, 4725 |
| HphI | 8 | 364, 1033, 4665, 4906, 1651, 4042, 4269, 4891 |
| Hpy99I | 19 | 590, 641, 1657, 2153, 2513, 2625, 2926, 3402, 4193, 4456, 5111, 5114, 939, 1793, 1911, 2410, 2609, 2687, 2732 |
| Hpy178III | 24 | 723, 1540, 1666, 1849, 1856, 2165, 2245, 2335, 2393, 2444, 2529, 2581, 3105, 3534, 3668, 3766, 3864, 3944, 4018, 4277, 5026, 5121, 5131, 5320 |
| Hpy188I | 24 | 604, 627, 772, 986, 1530, 1615, 1620, 1676, 1701, 1719, 2041, 2459, 2524, 2642, 2713, 3413, 3491, 3844, 3975, 4110, 4556, 4567, 4687, 5168 |
| Ksp632I | 2 | 3179, 4980 |
| MaeI | 11 | 724, 800, 892, 1572, 2875, 2935, 2939, 3796, 4046, 4381, 5364 |
| MaeII | 18 | 122, 134, 175, 258, 339, 444, 934, 1044, 1087, 1099, 1630, 1659, 1929, 2662, 4001, 4417, 4790, 5110 |
| MaeIII | 15 | 62, 149, 498, 856, 868, 1926, 2815, 3658, 3721, 3837, 4117, 4448, 4506, 4659, 4847 |
| MboI | 30 | 585, 659, 677, 1618, 1623, 1679, 1812, 1997, 2010, 2100, 2407, 2527, 2744, 2760, 3868, 3940, 3951, 3959, 4037, 4049, 4154, 4495, 4513, 4559, 4817, 4834, 4870, 5119, 5127, 5135 |
| MboII | 14 | 727, 1728, 3799, 3948, 5284, 914, 2329, 2332, 2776, 3180, 4039, 4794, 4872, 4981 |
| McrI | 10 | 702, 1840, 1975, 1996, 2005, 2575, 3214, 3638, 4558, 4707 |
| MfeI | 1 | 5275 |
| MluI | 1 | 5342 |
| MmeI | 6 | 1701, 2235, 3491, 3675, 1089, 5212 |
| MnlI | 33 | 709, 1008, 1522, 1528, 2213, 2747, 2932, 3190, 3473, 4348, 4554, 548, 775, 1509, 1515, 1552, 1555, 1567, 1722, 1759, 1983, 2190, 2289, 2316, 2339, 2387, 2645, 3157, 3416, 3740, 4137, 4218, 5216 |
| MseI | 20 | 7, 650, 835, 1106, 1204, 1221, 1232, 1242, 3072, 3131, 4004, 4056, 4061, 4075, 4128, 4363, 4402, 4767, 5183, 5245 |
| MslI | 4 | 361, 4439, 4598, 4957 |
| MstI | 1 | 4411 |
| MwoI | 39 | 84, 206, 238, 277, 370, 394, 745, 769, 830, 832, 874, 901, 931, 1186, 1310, 1382, 1433, 1512, 1518, 1836, 1903, 1934, 1986, 1995, 2017, 2026, 2148, 2210, 2363, 2390, 2490, 3039, 3083, 3167, 3234, 3348, 3917, 4305, 5305 |
| NaeI | 2 | 940, 2733 |
| NcoI | 3 | 360, 1478, 1987 |
| NdeI | 2 | 233, 2084 |
| NlaIII | 20 | 301, 361, 742, 1316, 1388, 1479, 1988, 2071, 2106, 2765, 2913, 2956, 3302, 4019, 4510, 4520, 4598, 4634, 5027, 5281 |
| NlaIV | 19 | 465, 584, 971, 983, 1004, 1287, 1359, 2209, 2232, 2416, 2532, 3045, 3331, 3370, 4139, 4233, 4274, 4485, 5075 |
| NotI | 1 | 701 |
| NruI | 1 | 5320 |
| NspI | 4 | 741, 1315, 1387, 3301 |
| NspBII | 8 | 789, 1960, 2269, 2412, 3123, 3641, 3886, 4824 |
| PfoI | 1 | 2725 |
| PleI | 6 | 1093, 3672, 410, 1115, 3201, 4186 |
| PmaCI | 2 | 1629, 2661 |
| PpiI | 4 | 3989, 1093, 2289, 4832 |
| PshAI | 1 | 1658 |
| PsiI | 2 | 1171, 2807 |
| PstI | 1 | 1968 |
| PvuI | 2 | 1996, 4558 |
| PvuII | 2 | 789, 3123 |
| RsaI | 11 | 218, 243, 298, 331, 382, 539, 2551, 2604, 4670, 5157, 5327 |
| RsrII | 1 | 2042 |
| SacII | 1 | 2412 |
| SalI | 2 | 2927, 5112 |
| SapI | 1 | 3178 |
| ScaI | 2 | 2603, 4669 |
| ScrFI | 17 | 89, 282, 1284, 1339, 1356, 1592, 1593, 2420, 2536, 2726, 3040, 3328, 3449, 3462, 3680, 4373, 4724 |
| SduI | 9 | 759, 795, 970, 1915, 2217, 3615, 4773, 4858, 5146 |
| SecI | 15 | 360, 580, 1283, 1355, 1478, 1513, 1571, 1592, 1987, 2188, 2343, 2412, 2643, 3040, 3461 |
| SexAI | 2 | 1338, 3679 |
| SfaNI | 18 | 1319, 1391, 1836, 1903, 2390, 2833, 3389, 4438, 4878, 367, 751, 1709, 1992, 2177, 2487, 2509, 4648, 5171 |
| SfeI | 5 | 822, 1968, 3566, 3757, 4432 |
| SfiI | 1 | 1185 |
| SgfI | 1 | 1995 |
| SimI | 7 | 26, 2504, 3972, 107, 1012, 3494, 4260 |
| SmaI | 1 | 1592 |
| SmlI | 4 | 3407, 3669, 3943, 4811 |
| SnaBI | 1 | 338 |
| SpeI | 1 | 5363 |
| SphI | 3 | 741, 1315, 1387 |
| SspI | 1 | 4993 |
| Sth132I | 46 | 85, 111, 278, 588, 898, 950, 1418, 1439, 1592, 1850, 1909, 1959, 2199, 2563, 3093, 3428, 3627, 3636, 3680, 4191, 4724, 5092, 5132, 416, 479, 845, 967, 1594, 1779, 2027, 2300, 2421, 2537, 2546, 2727, 2756, 3106, 3151, 3535, 3970, 4215, 4374, 4737, 4798, 5122, 5330 |
| StuI | 1 | 1568 |
| StyI | 6 | 360, 1478, 1571, 1987, 1283, 1355 |
| TaqI | 15 | 711, 1010, 1666, 1681, 1690, 1750, 2167, 2380, 2482, 2507, 2677, 2928, 3401, 4842, 5113 |
| TatI | 8 | 217, 297, 330, 381, 2603, 4669, 5156, 2550 |
| TauI | 19 | 701, 704, 827, 841, 1518, 1842, 2004, 2260, 2411, 2414, 2574, 2688, 3227, 3345, 3500, 4581, 4703, 4932, 5174 |
| TfiI | 15 | 601, 630, 1731, 1853, 2053, 2304, 2679, 2716, 3136, 3276, 5287, 410, 1115, 3201, 4186 |
| TseI | 29 | 863, 1712, 1789, 1970, 2001, 2363, 2490, 2802, 3125, 3206, 3224, 3643, 3708, 3711, 3914, 4242, 4608, 5314, 704, 1518, 1842, 2260, 2411, 2688, 3345, 3500, 4581, 4932, 5174 |
| Tsp45I | 4 | 868, 1926, 4448, 4659 |
| Tsp4CI | 16 | 74, 196, 267, 541, 579, 714, 1069, 2124, 2139, 2541, 2924, 3263, 3334, 3804, 4114, 4629 |
| TspDTI | 10 | 1635, 2698, 3134, 4067, 5282, 36, 670, 2082, 4169, 4472 |
| TspEI | 18 | 19, 1229, 1240, 1244, 1326, 1398, 1490, 1879, 2478, 2841, 2982, 2999, 3074, 4059, 4365, 4620, 5242, 5276 |
| TspGWI | 5 | 2250, 4958, 5116, 2151, 4641 |
| TspRI | 24 | 2115, 2144, 2866, 3088, 3197, 3703, 3716, 3984, 4133, 4238, 4585, 4612, 2113, 2142, 2864, 3086, 3195, 3701, 3714, 3982, 4131, 4236, 4583, 4610 |
| Tth111I | 2 | 1692, 2136 |
| Tth111II | 5 | 3875, 3911, 1864, 3905, 5203 |
| VspI | 5 | 6, 1241, 3071, 3130, 4362 |
| XbaI | 1 | 723 |
| XhoII | 12 | 584, 658, 676, 1617, 2759, 3939, 3950, 4036, 4048, 4816, 4833, 5126 |
| XmaIII | 4 | 702, 1840, 2005, 2575 |
| XmnI | 2 | 1239, 4786 |
