| Name | Freq | Positions |
|---|
| AatII | 1 | 4347 |
| AccI | 3 | 2158, 2165, 4350 |
| AceIII | 3 | 2479, 3716, 620 |
| AciI | 59 | 240, 267, 826, 838, 847, 859, 869, 880, 926, 1097, 1160, 1662, 1707, 1773, 1799, 1924, 1927, 2229, 2332, 2422, 2584, 2612, 2739, 2758, 2879, 3124, 3492, 3583, 3820, 3985, 4062, 4171, 4317, 4413, 4786, 122, 146, 195, 209, 212, 424, 1254, 1318, 1419, 1422, 1702, 1757, 1855, 1993, 2388, 2398, 2465, 2472, 2493, 2989, 3133, 3774, 3941, 4270 |
| AclI | 2 | 3654, 4027 |
| AcyI | 5 | 1187, 1889, 1968, 3965, 4347 |
| AflII | 1 | 4774 |
| AflIII | 3 | 449, 2539, 4580 |
| AhaIII | 4 | 3293, 3312, 4004, 4780 |
| AlfI | 2 | 707, 779 |
| AloI | 1 | 499 |
| AluI | 25 | 158, 325, 621, 941, 995, 1005, 1293, 1751, 2042, 2175, 2181, 2203, 2298, 2362, 2480, 2706, 2796, 2842, 3099, 3617, 3717, 3780, 4486, 4760, 4772 |
| AlwNI | 2 | 2950, 4427 |
| ApaBI | 2 | 717, 789 |
| ApaLI | 3 | 2853, 4096, 4384 |
| ApoI | 3 | 635, 2078, 4479 |
| AsuI | 8 | 458, 1704, 3471, 3550, 3567, 3789, 4569, 4596 |
| AsuII | 1 | 1869 |
| AvaI | 1 | 999 |
| AvaII | 5 | 1704, 3567, 3789, 4596, 3471 |
| AvrII | 1 | 978 |
| BalI | 1 | 1268 |
| BamHI | 1 | 4753 |
| BbvI | 18 | 231, 1249, 1291, 1812, 2040, 2946, 2949, 3152, 3846, 1148, 1332, 1425, 2363, 2444, 2462, 2881, 3480, 4552 |
| BbvII | 1 | 95 |
| BccI | 11 | 461, 842, 1400, 1902, 3465, 3589, 3876, 4823, 404, 1072, 1500 |
| Bce83I | 5 | 2907, 1579, 2645, 3181, 4049 |
| BcefI | 4 | 370, 1598, 3025, 1162 |
| BcgI | 1 | 3945 |
| BciVI | 4 | 175, 1396, 2748, 4272 |
| BclI | 2 | 1029, 4790 |
| BetI | 6 | 1219, 2745, 2892, 3720, 3509, 3962 |
| BfiI | 3 | 1127, 862, 3474 |
| BglI | 1 | 3543 |
| BglII | 1 | 4364 |
| BinI | 19 | 1024, 1048, 1359, 1605, 1997, 3177, 3274, 4054, 4356, 4753, 1438, 1982, 3106, 3189, 3287, 3751, 4072, 4373, 4754 |
| BplI | 2 | 922, 1853 |
| Bpu10I | 1 | 4531 |
| BsaAI | 2 | 450, 1490 |
| BsaBI | 2 | 404, 1043 |
| BsaXI | 2 | 499, 2392 |
| BseMII | 9 | 2814, 3220, 3386, 4391, 141, 938, 1851, 3926, 4461 |
| BsePI | 1 | 1585 |
| BseRI | 1 | 959 |
| BseSI | 5 | 1130, 1223, 2853, 4096, 4384 |
| BseYI | 6 | 699, 771, 113, 159, 1692, 2843 |
| BsiI | 4 | 1906, 1780, 2712, 4093 |
| BsiYI | 12 | 47, 188, 553, 880, 1163, 1707, 1988, 2381, 2555, 2573, 2739, 3018 |
| BsmI | 1 | 2108 |
| BsmAI | 4 | 4261, 1036, 3496, 4743 |
| Bsp24I | 3 | 1968, 3216, 4341 |
| BspHI | 2 | 3256, 4264 |
| BspLU11I | 1 | 2539 |
| BspMI | 3 | 1447, 1897, 1084 |
| BsrI | 14 | 536, 1127, 1328, 2942, 2955, 3900, 863, 2339, 3072, 3475, 3593, 3636, 4075, 4426 |
| BsrBI | 6 | 267, 1799, 2229, 1853, 2470, 4268 |
| BsrDI | 3 | 1414, 3483, 3665 |
| BtgZI | 5 | 1625, 4560, 462, 1474, 1818 |
| BtsI | 4 | 3822, 2104, 2326, 3850 |
| Cac8I | 29 | 105, 109, 251, 265, 308, 703, 722, 775, 794, 1080, 1266, 1485, 1551, 1557, 1585, 1589, 1630, 1634, 1688, 1971, 2330, 2359, 2468, 2554, 2591, 3148, 3539, 4472, 4818 |
| CauII | 8 | 999, 1000, 1191, 1351, 1964, 2918, 3611, 3962 |
| CdiI | 9 | 462, 1474, 1479, 1677, 1818, 3677, 1626, 4081, 4561 |
| CfrI | 6 | 1094, 1268, 1659, 1686, 2378, 3817 |
| Cfr10I | 5 | 308, 1507, 1688, 1971, 3509 |
| CjeI | 11 | 948, 2566, 3121, 4341, 4823, 449, 745, 1969, 3042, 3120, 3217 |
| CjePI | 8 | 42, 3072, 4341, 1968, 3216, 3336, 3808, 4373 |
| CspCI | 1 | 4872 |
| CstMI | 2 | 270, 3782 |
| CviJI | 90 | 128, 136, 158, 164, 311, 325, 339, 459, 601, 621, 694, 766, 889, 918, 924, 941, 964, 976, 982, 995, 1005, 1095, 1112, 1120, 1147, 1172, 1256, 1265, 1269, 1293, 1331, 1407, 1424, 1443, 1506, 1550, 1560, 1577, 1660, 1687, 1691, 1728, 1751, 1767, 1947, 1974, 2042, 2175, 2181, 2203, 2255, 2276, 2298, 2362, 2379, 2461, 2480, 2553, 2564, 2582, 2608, 2706, 2796, 2842, 2847, 2872, 2951, 3016, 3027, 3070, 3099, 3459, 3471, 3512, 3538, 3542, 3551, 3617, 3707, 3717, 3780, 3818, 4424, 4486, 4502, 4570, 4760, 4772, 4795, 4821 |
| CviRI | 23 | 716, 725, 788, 797, 912, 988, 1079, 1238, 1413, 1427, 2039, 2107, 2365, 2854, 3147, 3482, 3572, 3765, 3853, 4097, 4385, 4517, 4665 |
| DdeI | 11 | 141, 938, 1851, 2814, 3220, 3386, 3926, 4391, 4461, 4532, 4600 |
| DpnI | 28 | 1025, 1030, 1049, 1360, 1438, 1519, 1528, 1606, 1982, 1998, 3106, 3178, 3189, 3197, 3275, 3287, 3392, 3733, 3751, 3797, 4055, 4072, 4108, 4357, 4365, 4373, 4754, 4791 |
| DraIII | 1 | 450 |
| DrdI | 3 | 493, 1209, 2641 |
| DsaI | 2 | 885, 1620 |
| Eam1105I | 1 | 3424 |
| EciI | 9 | 145, 1701, 837, 858, 868, 879, 2611, 2757, 3582 |
| Eco31I | 2 | 3496, 4743 |
| Eco57I | 4 | 1313, 1745, 3066, 4111 |
| Eco57MI | 7 | 1313, 1745, 2007, 3066, 1986, 3514, 4111 |
| EcoRII | 14 | 31, 691, 746, 763, 1574, 2278, 2566, 2687, 2700, 4861, 999, 1191, 2918, 3962 |
| FalI | 1 | 1505 |
| FauI | 9 | 266, 825, 846, 2331, 212, 1318, 1855, 1993, 2388 |
| FnuDII | 18 | 184, 208, 228, 643, 1253, 1554, 1586, 1992, 2385, 2387, 2585, 3163, 3493, 3986, 4318, 4471, 4559, 4581 |
| Fnu4HI | 37 | 195, 209, 231, 925, 1096, 1148, 1159, 1249, 1254, 1291, 1332, 1419, 1422, 1425, 1661, 1757, 1798, 1812, 1926, 2040, 2363, 2444, 2462, 2465, 2583, 2738, 2881, 2946, 2949, 3152, 3480, 3819, 3846, 3941, 4170, 4412, 4552 |
| FokI | 9 | 118, 1042, 1499, 1524, 1978, 843, 3409, 3590, 3877 |
| GdiII | 5 | 1094, 2378, 1659, 1686, 3817 |
| GsuI | 3 | 2007, 1986, 3514 |
| HaeI | 6 | 975, 1268, 2552, 2563, 3015, 2378 |
| HaeII | 5 | 254, 262, 1187, 2413, 2783 |
| HaeIII | 18 | 459, 601, 918, 924, 976, 1095, 1269, 1660, 1687, 2379, 2553, 2564, 2582, 3016, 3471, 3551, 3818, 4570 |
| HaeIV | 2 | 1360, 3424 |
| HgaI | 5 | 1889, 1968, 2641, 3216, 3966 |
| HgiAI | 12 | 1297, 1487, 2853, 4011, 4096, 4384, 4759, 185, 255, 263, 1188, 4319 |
| HgiCI | 8 | 38, 372, 1187, 1222, 2283, 3377, 4765, 4868 |
| HgiJII | 5 | 127, 163, 338, 1549, 4759 |
| HhaI | 30 | 185, 198, 207, 229, 255, 263, 1180, 1188, 1252, 1289, 1555, 1585, 1587, 1815, 1991, 2321, 2386, 2414, 2447, 2717, 2784, 2884, 3058, 3164, 3557, 3650, 3987, 4319, 4470, 4550 |
| Hin4I | 5 | 1360, 3424, 3498, 4754, 1390 |
| HindII | 3 | 2165, 4350, 4584 |
| HindIII | 1 | 4771 |
| HinfI | 14 | 500, 522, 1673, 1807, 1859, 1917, 1954, 2374, 2439, 2514, 2910, 3424, 4525, 4619 |
| HpaI | 1 | 4584 |
| HpaII | 22 | 309, 1000, 1093, 1170, 1192, 1220, 1351, 1441, 1508, 1689, 1964, 1972, 2257, 2746, 2893, 2919, 3109, 3510, 3544, 3611, 3721, 3963 |
| HphI | 8 | 401, 3903, 4144, 1374, 3280, 3507, 4129, 4691 |
| Hpy99I | 16 | 1274, 1302, 1596, 1611, 1888, 2164, 2640, 3431, 3694, 4349, 4352, 307, 1161, 1797, 1925, 1970 |
| Hpy178III | 23 | 947, 1032, 1205, 1521, 1530, 1613, 1669, 1713, 1803, 1836, 1905, 2343, 2772, 2906, 3004, 3102, 3182, 3256, 3515, 4264, 4359, 4369, 4558 |
| Hpy188I | 20 | 140, 354, 937, 1022, 1027, 1153, 1497, 1850, 1951, 2651, 2729, 3082, 3213, 3348, 3794, 3805, 3925, 4406, 4751, 4756 |
| KpnI | 1 | 4765 |
| Ksp632I | 4 | 2417, 4218, 1537, 1747 |
| MaeI | 10 | 168, 260, 979, 2113, 2173, 2177, 3034, 3284, 3619, 4812 |
| MaeII | 11 | 302, 451, 494, 506, 1304, 1491, 3239, 3655, 4028, 4348, 4700 |
| MaeIII | 13 | 224, 236, 1309, 1615, 2053, 2896, 2959, 3075, 3355, 3686, 3744, 3897, 4085 |
| MboI | 28 | 1025, 1030, 1049, 1360, 1438, 1519, 1528, 1606, 1982, 1998, 3106, 3178, 3189, 3197, 3275, 3287, 3392, 3733, 3751, 3797, 4055, 4072, 4108, 4357, 4365, 4373, 4754, 4791 |
| MboII | 14 | 95, 1537, 1747, 3037, 3186, 4522, 282, 1847, 2014, 2418, 3277, 4032, 4110, 4219 |
| McrI | 5 | 1094, 2452, 2876, 3796, 3945 |
| MfeI | 1 | 4513 |
| MluI | 1 | 4580 |
| MmeI | 4 | 2729, 2913, 496, 4450 |
| MnlI | 31 | 9, 376, 929, 935, 1779, 1985, 2170, 2428, 2711, 3586, 3792, 4649, 4797, 4839, 143, 433, 916, 922, 959, 962, 974, 1046, 1110, 1246, 1603, 2395, 2654, 2978, 3375, 3456, 4454 |
| MseI | 22 | 203, 513, 611, 628, 639, 649, 2310, 2369, 3242, 3294, 3299, 3313, 3366, 3601, 3640, 4005, 4421, 4483, 4585, 4612, 4775, 4781 |
| MslI | 5 | 1621, 3677, 3836, 4195, 4695 |
| MstI | 2 | 1288, 3649 |
| MwoI | 29 | 113, 137, 198, 200, 242, 269, 299, 717, 789, 840, 919, 925, 1173, 1257, 1280, 1419, 1425, 1542, 1578, 1625, 1892, 2277, 2321, 2405, 2472, 2586, 3155, 3543, 4543 |
| NaeI | 3 | 308, 1688, 1971 |
| NarI | 1 | 1187 |
| NcoI | 2 | 885, 1620 |
| NlaIII | 21 | 110, 723, 795, 886, 1059, 1404, 1590, 1621, 1647, 2003, 2151, 2194, 2540, 3257, 3748, 3758, 3836, 3872, 4265, 4519, 4667 |
| NlaIV | 19 | 38, 339, 351, 372, 694, 766, 1187, 1222, 2283, 2569, 2608, 3377, 3471, 3512, 3723, 4313, 4753, 4765, 4868 |
| NruI | 1 | 4558 |
| NspI | 6 | 109, 722, 794, 1589, 2539, 4666 |
| NspBII | 7 | 157, 1292, 2361, 2879, 3124, 4062, 4786 |
| PfoI | 1 | 1963 |
| PleI | 7 | 500, 2910, 522, 1859, 2439, 3424, 4619 |
| PmeI | 1 | 4779 |
| PpiI | 3 | 3227, 500, 4070 |
| PsiI | 3 | 578, 2045, 4728 |
| PstI | 1 | 1237 |
| PvuI | 1 | 3796 |
| PvuII | 3 | 157, 1292, 2361 |
| RsaI | 5 | 1493, 3908, 4395, 4565, 4766 |
| RsrII | 1 | 1703 |
| SacI | 1 | 4759 |
| SalI | 2 | 2165, 4350 |
| SapI | 3 | 2416, 1537, 1747 |
| SauI | 1 | 4599 |
| ScaI | 1 | 3907 |
| ScrFI | 18 | 31, 691, 746, 763, 999, 1000, 1191, 1351, 1574, 1964, 2278, 2566, 2687, 2700, 2918, 3611, 3962, 4861 |
| SduI | 13 | 127, 163, 338, 1130, 1223, 1297, 1487, 1549, 2853, 4011, 4096, 4384, 4759 |
| SecI | 12 | 30, 690, 762, 885, 920, 978, 999, 1351, 1620, 2278, 2699, 4860 |
| SexAI | 2 | 745, 2917 |
| SfaNI | 15 | 726, 798, 1478, 1542, 1817, 2071, 2627, 3676, 4116, 119, 1156, 1411, 1627, 3886, 4409 |
| SfeI | 6 | 190, 1237, 2804, 2995, 3670, 4625 |
| SimI | 7 | 3210, 28, 380, 1617, 2732, 3498, 4858 |
| SmaI | 1 | 999 |
| SmlI | 6 | 1579, 2645, 2907, 3181, 4049, 4774 |
| SphI | 4 | 109, 722, 794, 1589 |
| SspI | 1 | 4231 |
| Sth132I | 40 | 14, 266, 318, 825, 846, 999, 1191, 1594, 1733, 1804, 2331, 2666, 2865, 2874, 2918, 3429, 3962, 4330, 4370, 4844, 213, 335, 419, 1001, 1277, 1319, 1352, 1856, 1965, 1994, 2344, 2389, 2773, 3208, 3453, 3612, 3975, 4036, 4360, 4568 |
| StuI | 1 | 975 |
| StyI | 5 | 885, 978, 1620, 690, 762 |
| TaqI | 13 | 378, 1301, 1457, 1481, 1517, 1679, 1870, 1915, 2166, 2639, 4080, 4351, 4799 |
| TatI | 2 | 3907, 4394 |
| TauI | 19 | 195, 209, 925, 1096, 1159, 1254, 1419, 1422, 1661, 1757, 1798, 1926, 2465, 2583, 2738, 3819, 3941, 4170, 4412 |
| TfiI | 12 | 1673, 1807, 1917, 1954, 2374, 2514, 4525, 522, 1859, 2439, 3424, 4619 |
| TseI | 29 | 231, 1148, 1249, 1291, 1332, 1425, 1812, 2040, 2363, 2444, 2462, 2881, 2946, 2949, 3152, 3480, 3846, 4552, 925, 1096, 1159, 1661, 1798, 1926, 2583, 2738, 3819, 4170, 4412 |
| Tsp45I | 5 | 236, 1309, 1615, 3686, 3897 |
| Tsp4CI | 12 | 476, 1566, 1682, 1790, 2162, 2501, 2572, 3042, 3352, 3867, 4594, 4802 |
| TspDTI | 9 | 439, 1232, 1936, 2372, 3305, 4520, 1675, 3407, 3710 |
| TspEI | 16 | 636, 647, 651, 733, 805, 897, 2079, 2220, 2237, 2312, 3297, 3603, 3858, 4480, 4514, 4643 |
| TspGWI | 3 | 4196, 4354, 3879 |
| TspRI | 22 | 1311, 2104, 2326, 2435, 2941, 2954, 3222, 3371, 3476, 3823, 3850, 1309, 2102, 2324, 2433, 2939, 2952, 3220, 3369, 3474, 3821, 3848 |
| Tth111I | 1 | 1303 |
| Tth111II | 7 | 3113, 3149, 1, 1633, 3143, 4441, 4831 |
| VspI | 0 | |
| XcmI | 1 | 42 |
| XhoII | 12 | 1024, 1359, 1605, 1997, 3177, 3188, 3274, 3286, 4054, 4071, 4364, 4753 |
| XmaIII | 1 | 1094 |
| XmnI | 2 | 646, 4024 |
| I-CeuI | 1 | 4586 |
| PI-SceI | 1 | 411 |
