| Name | Freq | Positions |
|---|
| AatII | 2 | 1287, 4738 |
| AccI | 3 | 2549, 2556, 4741 |
| AceIII | 5 | 1342, 2870, 4107, 842, 1801 |
| AciI | 65 | 83, 157, 501, 528, 1048, 1060, 1069, 1081, 1091, 1102, 1148, 1283, 1472, 1539, 1589, 1675, 1890, 2041, 2064, 2193, 2315, 2318, 2620, 2723, 2813, 2975, 3003, 3130, 3149, 3270, 3515, 3883, 3974, 4211, 4376, 4453, 4562, 4708, 4804, 5092, 383, 407, 456, 470, 473, 1407, 1609, 1633, 1655, 1852, 1900, 2013, 2043, 2203, 2384, 2779, 2789, 2856, 2863, 2884, 3380, 3524, 4165, 4332, 4661 |
| AclI | 2 | 4045, 4418 |
| AcyI | 5 | 1287, 2255, 2359, 4356, 4738 |
| AflII | 1 | 145 |
| AflIII | 2 | 2930, 4971 |
| AhaIII | 6 | 151, 3684, 3703, 4395, 5276, 5289 |
| AlfI | 2 | 929, 1001 |
| AloI | 1 | 721 |
| AluI | 29 | 143, 419, 586, 843, 1163, 1217, 1227, 1343, 1375, 1417, 1802, 2027, 2092, 2121, 2433, 2566, 2572, 2594, 2689, 2753, 2871, 3097, 3187, 3233, 3490, 4008, 4108, 4171, 4877 |
| AlwNI | 2 | 3341, 4818 |
| ApaBI | 4 | 939, 1011, 1563, 1839 |
| ApaLI | 5 | 1544, 1846, 3244, 4487, 4775 |
| ApoI | 5 | 857, 1507, 2469, 4870, 5038 |
| AsuI | 11 | 680, 1663, 1672, 1814, 2213, 3862, 3941, 3958, 4180, 4960, 5129 |
| AvaI | 1 | 1221 |
| AvaII | 6 | 1672, 2213, 3958, 4180, 1663, 3862 |
| AvrII | 1 | 1200 |
| BalI | 1 | 813 |
| BamHI | 1 | 78 |
| BbvI | 18 | 492, 1341, 1599, 1992, 2119, 2431, 3337, 3340, 3543, 4237, 1418, 1630, 2754, 2835, 2853, 3272, 3871, 4943 |
| BbvII | 1 | 356 |
| BccI | 10 | 194, 683, 1064, 3856, 3980, 4267, 665, 1426, 1758, 2218 |
| Bce83I | 4 | 3298, 3036, 3572, 4440 |
| BcefI | 6 | 631, 2102, 3416, 1541, 1971, 2206 |
| BcgI | 1 | 4336 |
| BciVI | 3 | 436, 3139, 4663 |
| BclI | 2 | 161, 1251 |
| BetI | 8 | 1485, 2022, 2158, 3136, 3283, 4111, 3900, 4353 |
| BfiI | 3 | 1084, 3865, 5044 |
| BglI | 2 | 815, 3934 |
| BglII | 1 | 4755 |
| BinI | 18 | 78, 1246, 2035, 2388, 3568, 3665, 4445, 4747, 79, 1729, 2156, 2373, 3497, 3580, 3678, 4142, 4463, 4764 |
| BplI | 1 | 1144 |
| Bpu10I | 1 | 4922 |
| BsaAI | 5 | 672, 1258, 2290, 5075, 5234 |
| BsaXI | 3 | 1322, 721, 2783 |
| BseMII | 11 | 122, 3205, 3611, 3777, 4782, 92, 293, 402, 1160, 4317, 4852 |
| BsePI | 3 | 5094, 5103, 5105 |
| BseRI | 2 | 1181, 5026 |
| BseSI | 5 | 1544, 1846, 3244, 4487, 4775 |
| BseYI | 6 | 921, 993, 2260, 374, 420, 3234 |
| BsiI | 4 | 1364, 1843, 3103, 4484 |
| BsiYI | 16 | 449, 775, 1102, 1479, 1542, 1829, 1938, 2159, 2379, 2772, 2946, 2964, 3130, 3409, 5074, 5110 |
| BsmI | 1 | 2499 |
| BsmAI | 3 | 1327, 4652, 3887 |
| Bsp24I | 5 | 1878, 2359, 3607, 2261, 4732 |
| BspHI | 2 | 3647, 4655 |
| BspLU11I | 1 | 2930 |
| BspMI | 1 | 1568 |
| BspMII | 3 | 1485, 2022, 2158 |
| BsrI | 15 | 758, 1745, 1910, 3333, 3346, 4291, 1085, 2730, 3463, 3866, 3984, 4027, 4466, 4817, 5045 |
| BsrBI | 6 | 528, 2620, 1653, 2011, 2861, 4659 |
| BsrDI | 2 | 3874, 4056 |
| BtgZI | 4 | 1921, 4951, 282, 684 |
| BtsI | 4 | 4213, 2495, 2717, 4241 |
| Cac8I | 28 | 189, 366, 370, 512, 526, 569, 925, 944, 997, 1016, 1587, 1788, 1848, 2028, 2191, 2362, 2721, 2750, 2859, 2945, 2982, 3539, 3930, 4863, 5060, 5094, 5103, 5105 |
| CauII | 8 | 1221, 1222, 2049, 2165, 2355, 3309, 4002, 4353 |
| CdiI | 13 | 282, 684, 1466, 4068, 1380, 1425, 1797, 1922, 2112, 2137, 2217, 4472, 4952 |
| CfrI | 7 | 813, 1469, 1634, 1887, 2204, 2769, 4208 |
| Cfr10I | 4 | 569, 1602, 2362, 3900 |
| CjeI | 13 | 194, 1170, 2261, 2957, 3512, 4732, 967, 1694, 1879, 2360, 3433, 3511, 3608 |
| CjePI | 10 | 2261, 3463, 4732, 1878, 2116, 2359, 3607, 3727, 4199, 4764 |
| CstMI | 2 | 531, 4173 |
| CviJI | 94 | 143, 166, 192, 389, 397, 419, 425, 572, 586, 600, 681, 814, 823, 843, 916, 988, 1111, 1140, 1146, 1163, 1186, 1198, 1204, 1217, 1227, 1271, 1343, 1375, 1417, 1470, 1519, 1601, 1614, 1635, 1645, 1663, 1791, 1802, 1815, 1861, 1888, 1970, 1980, 2027, 2045, 2092, 2121, 2163, 2205, 2221, 2338, 2365, 2433, 2566, 2572, 2594, 2646, 2667, 2689, 2753, 2770, 2852, 2871, 2944, 2955, 2973, 2999, 3097, 3187, 3233, 3238, 3263, 3342, 3407, 3418, 3461, 3490, 3850, 3862, 3903, 3929, 3933, 3942, 4008, 4098, 4108, 4171, 4209, 4815, 4877, 4893, 4961, 5130, 5174 |
| CviRI | 30 | 280, 938, 947, 1010, 1019, 1134, 1210, 1340, 1464, 1531, 1545, 1562, 1598, 1847, 2031, 2118, 2430, 2498, 2756, 3245, 3538, 3873, 3963, 4156, 4244, 4488, 4776, 4908, 5158, 5270 |
| DdeI | 13 | 92, 122, 293, 402, 1160, 1642, 3205, 3611, 3777, 4317, 4782, 4852, 4923 |
| DpnI | 30 | 79, 112, 162, 1247, 1252, 1308, 1441, 1626, 1639, 1729, 2036, 2156, 2373, 2389, 3497, 3569, 3580, 3588, 3666, 3678, 3783, 4124, 4142, 4188, 4446, 4463, 4499, 4748, 4756, 4764 |
| DraII | 1 | 5128 |
| DraIII | 4 | 672, 1547, 1840, 5072 |
| DrdI | 4 | 715, 1762, 2143, 3032 |
| DsaI | 4 | 1107, 1616, 1972, 2041 |
| Eam1105I | 1 | 3815 |
| EciI | 8 | 406, 1059, 1080, 1090, 1101, 3002, 3148, 3973 |
| Eco31I | 1 | 3887 |
| Eco57I | 2 | 3457, 4502 |
| Eco57MI | 7 | 1911, 1965, 2398, 3457, 2377, 3905, 4502 |
| EcoRI | 2 | 1507, 5038 |
| EcoRII | 11 | 232, 913, 968, 985, 2669, 2957, 3078, 3091, 1221, 3309, 4353 |
| Esp3I | 1 | 1326 |
| FauI | 14 | 82, 527, 1047, 1068, 1538, 1588, 2192, 2722, 75, 473, 1407, 1655, 2384, 2779 |
| FnuDII | 30 | 74, 445, 469, 489, 865, 1284, 1473, 1608, 1719, 1785, 1851, 2000, 2042, 2202, 2383, 2776, 2778, 2976, 3554, 3884, 4377, 4709, 4862, 4950, 4972, 5057, 5093, 5095, 5104, 5106 |
| Fnu4HI | 35 | 456, 470, 492, 1147, 1341, 1418, 1471, 1599, 1630, 1633, 1889, 1992, 2040, 2043, 2119, 2203, 2317, 2431, 2754, 2835, 2853, 2856, 2974, 3129, 3272, 3337, 3340, 3543, 3871, 4210, 4237, 4332, 4561, 4803, 4943 |
| FokI | 8 | 379, 1620, 2369, 1065, 2020, 3800, 3981, 4268 |
| GdiII | 6 | 1469, 1634, 2204, 2769, 1887, 4208 |
| GsuI | 5 | 1911, 1965, 2398, 2377, 3905 |
| HaeI | 8 | 813, 1197, 1613, 2943, 2954, 3406, 1662, 2769 |
| HaeII | 4 | 515, 523, 2804, 3174 |
| HaeIII | 24 | 681, 814, 823, 1140, 1146, 1198, 1470, 1614, 1635, 1663, 1815, 1888, 1970, 2205, 2770, 2944, 2955, 2973, 3407, 3862, 3942, 4209, 4961, 5130 |
| HaeIV | 3 | 72, 1722, 3815 |
| HgaI | 11 | 72, 1998, 2143, 2255, 2359, 3032, 3607, 5055, 1325, 1777, 4357 |
| HgiAI | 10 | 1544, 1846, 3244, 4402, 4487, 4775, 446, 516, 524, 4710 |
| HgiCI | 5 | 239, 633, 1838, 2674, 3768 |
| HgiJII | 3 | 388, 424, 599 |
| HhaI | 35 | 446, 459, 468, 490, 516, 524, 1421, 1474, 1718, 1786, 2001, 2128, 2201, 2382, 2712, 2777, 2805, 2838, 3108, 3175, 3275, 3449, 3555, 3948, 4041, 4378, 4710, 4861, 4941, 5058, 5094, 5096, 5103, 5105, 5107 |
| Hin4I | 7 | 72, 1321, 1722, 1855, 3815, 3889, 295 |
| HindII | 3 | 2098, 2556, 4741 |
| HindIII | 1 | 142 |
| HinfI | 17 | 103, 722, 744, 1360, 1482, 1682, 1933, 2308, 2345, 2765, 2830, 2905, 3301, 3815, 4916, 4984, 5144 |
| HpaII | 21 | 570, 1222, 1486, 1603, 1836, 2023, 2049, 2159, 2165, 2355, 2363, 2648, 3137, 3284, 3310, 3500, 3901, 3935, 4002, 4112, 4354 |
| HphI | 7 | 662, 4294, 4535, 1280, 3671, 3898, 4520 |
| Hpy99I | 18 | 1286, 1782, 2142, 2254, 2555, 3031, 3822, 4085, 4740, 4743, 568, 1422, 1540, 2039, 2238, 2316, 2361, 5097 |
| Hpy178III | 24 | 106, 1169, 1295, 1478, 1485, 1794, 1874, 1964, 2022, 2073, 2158, 2210, 2734, 3163, 3297, 3395, 3493, 3573, 3647, 3906, 4655, 4750, 4760, 4949 |
| Hpy188I | 23 | 292, 401, 615, 1159, 1244, 1249, 1305, 1330, 1348, 1670, 2088, 2153, 2271, 2342, 3042, 3120, 3473, 3604, 3739, 4185, 4196, 4316, 4797 |
| Ksp632I | 3 | 2808, 4609, 5124 |
| MaeI | 10 | 183, 429, 521, 1201, 2504, 2564, 2568, 3425, 3675, 4010 |
| MaeII | 15 | 563, 673, 716, 728, 1259, 1288, 1558, 2291, 3630, 4046, 4419, 4739, 5076, 5235, 5240 |
| MaeIII | 16 | 23, 485, 497, 1555, 2444, 3287, 3350, 3466, 3746, 4077, 4135, 4288, 4476, 5078, 5088, 5237 |
| MboI | 30 | 79, 112, 162, 1247, 1252, 1308, 1441, 1626, 1639, 1729, 2036, 2156, 2373, 2389, 3497, 3569, 3580, 3588, 3666, 3678, 3783, 4124, 4142, 4188, 4446, 4463, 4499, 4748, 4756, 4764 |
| MboII | 15 | 356, 1357, 3428, 3577, 4913, 5124, 543, 1958, 1961, 2405, 2809, 3668, 4423, 4501, 4610 |
| McrI | 9 | 1469, 1604, 1625, 1634, 2204, 2843, 3267, 4187, 4336 |
| MfeI | 1 | 4904 |
| MluI | 1 | 4971 |
| MmeI | 6 | 1330, 1864, 3120, 3304, 718, 4841 |
| MnlI | 38 | 168, 210, 637, 1151, 1157, 1842, 2376, 2561, 2819, 3102, 3977, 4183, 5014, 272, 347, 404, 1138, 1144, 1181, 1184, 1196, 1351, 1388, 1612, 1819, 1918, 1945, 1968, 2016, 2274, 2786, 3045, 3369, 3766, 3847, 4845, 5026, 5127 |
| MseI | 24 | 146, 152, 464, 735, 833, 850, 861, 871, 2701, 2760, 3633, 3685, 3690, 3704, 3757, 3992, 4031, 4396, 4812, 4874, 4977, 5197, 5277, 5290 |
| MslI | 3 | 4068, 4227, 4586 |
| MstI | 1 | 4040 |
| MwoI | 36 | 374, 398, 459, 461, 503, 530, 560, 815, 939, 1011, 1062, 1141, 1147, 1465, 1532, 1563, 1615, 1624, 1646, 1655, 1777, 1839, 1992, 2019, 2119, 2668, 2712, 2796, 2863, 2977, 3546, 3934, 4934, 5094, 5096, 5098 |
| NaeI | 2 | 569, 2362 |
| NcoI | 2 | 1107, 1616 |
| NdeI | 2 | 11, 1713 |
| NlaIII | 20 | 371, 945, 1017, 1108, 1617, 1700, 1735, 2394, 2542, 2585, 2931, 3648, 4139, 4149, 4227, 4263, 4656, 4910, 5035, 5141 |
| NlaIV | 19 | 78, 239, 600, 612, 633, 916, 988, 1838, 1861, 2045, 2161, 2674, 2960, 2999, 3768, 3862, 3903, 4114, 4704 |
| NruI | 1 | 4949 |
| NspI | 4 | 370, 944, 1016, 2930 |
| NspBII | 9 | 157, 418, 1589, 1898, 2041, 2752, 3270, 3515, 4453 |
| PfoI | 1 | 2354 |
| PleI | 6 | 722, 3301, 744, 2830, 3815, 4984 |
| PmaCI | 3 | 1258, 2290, 5075 |
| PmeI | 1 | 150 |
| PpiI | 4 | 3618, 722, 1918, 4461 |
| PshAI | 1 | 1287 |
| PsiI | 2 | 800, 2436 |
| PstI | 1 | 1597 |
| PvuI | 2 | 1625, 4187 |
| PvuII | 2 | 418, 2752 |
| RsaI | 8 | 96, 119, 2180, 2233, 4299, 4786, 4956, 5226 |
| RsrII | 1 | 1671 |
| SacII | 1 | 2041 |
| SalI | 2 | 2556, 4741 |
| SapI | 1 | 2807 |
| ScaI | 4 | 95, 118, 2232, 4298 |
| ScrFI | 16 | 232, 913, 968, 985, 1221, 1222, 2049, 2165, 2355, 2669, 2957, 3078, 3091, 3309, 4002, 4353 |
| SduI | 9 | 388, 424, 599, 1544, 1846, 3244, 4402, 4487, 4775 |
| SecI | 15 | 231, 912, 984, 1107, 1142, 1200, 1221, 1616, 1817, 1972, 2041, 2272, 2669, 3090, 5110 |
| SexAI | 2 | 967, 3308 |
| SfaNI | 18 | 281, 948, 1020, 1465, 1532, 2019, 2462, 3018, 4067, 4507, 380, 1338, 1621, 1806, 2116, 2138, 4277, 4800 |
| SfeI | 6 | 451, 1597, 3195, 3386, 4061, 4990 |
| SfiI | 1 | 814 |
| SgfI | 1 | 1624 |
| SimI | 6 | 2133, 3601, 229, 641, 3123, 3889 |
| SmaI | 1 | 1221 |
| SmlI | 5 | 145, 3036, 3298, 3572, 4440 |
| SphI | 3 | 370, 944, 1016 |
| SspI | 1 | 4622 |
| Sth132I | 44 | 82, 215, 527, 579, 1047, 1068, 1221, 1479, 1538, 1588, 1828, 2192, 2722, 3057, 3256, 3265, 3309, 3820, 4353, 4721, 4761, 76, 474, 596, 1223, 1408, 1656, 1929, 2050, 2166, 2175, 2356, 2385, 2735, 2780, 3164, 3599, 3844, 4003, 4366, 4427, 4751, 4959, 5117 |
| StuI | 1 | 1197 |
| StyI | 6 | 1107, 1200, 1616, 5110, 912, 984 |
| TaqI | 18 | 39, 101, 114, 170, 639, 1295, 1310, 1319, 1379, 1796, 2009, 2111, 2136, 2306, 2557, 3030, 4471, 4742 |
| TatI | 7 | 95, 118, 2232, 4298, 4785, 5225, 2179 |
| TauI | 17 | 456, 470, 1147, 1471, 1633, 1889, 2040, 2043, 2203, 2317, 2856, 2974, 3129, 4210, 4332, 4561, 4803 |
| TfiI | 15 | 103, 1360, 1482, 1682, 1933, 2308, 2345, 2765, 2905, 4916, 5144, 744, 2830, 3815, 4984 |
| TseI | 28 | 492, 1341, 1418, 1599, 1630, 1992, 2119, 2431, 2754, 2835, 2853, 3272, 3337, 3340, 3543, 3871, 4237, 4943, 1147, 1471, 1889, 2040, 2317, 2974, 3129, 4210, 4561, 4803 |
| Tsp45I | 7 | 497, 1555, 4077, 4288, 5078, 5088, 5237 |
| Tsp4CI | 14 | 20, 173, 251, 698, 1753, 1768, 2170, 2553, 2892, 2963, 3433, 3743, 4258, 5205 |
| TspDTI | 10 | 1264, 2327, 2763, 3696, 4911, 5036, 1711, 3798, 4101, 5150 |
| TspEI | 25 | 277, 858, 869, 873, 955, 1027, 1119, 1508, 2107, 2470, 2611, 2628, 2703, 3688, 3994, 4249, 4871, 4905, 5008, 5039, 5189, 5195, 5199, 5254, 5281 |
| TspGWI | 6 | 1879, 4587, 4745, 5081, 1780, 4270 |
| TspRI | 28 | 250, 1744, 1773, 2495, 2717, 2826, 3332, 3345, 3613, 3762, 3867, 4214, 4241, 5046, 248, 1742, 1771, 2493, 2715, 2824, 3330, 3343, 3611, 3760, 3865, 4212, 4239, 5044 |
| Tth111I | 2 | 1321, 1765 |
| Tth111II | 6 | 3504, 3540, 202, 1493, 3534, 4832 |
| VspI | 5 | 870, 2700, 2759, 3991, 5196 |
| XhoII | 10 | 78, 1246, 2388, 3568, 3579, 3665, 3677, 4445, 4462, 4755 |
| XmaIII | 3 | 1469, 1634, 2204 |
| XmnI | 2 | 868, 4415 |
