| Name | Freq | Positions |
|---|
| AatII | 6 | 306, 359, 442, 628, 2597, 6048 |
| AccI | 3 | 3859, 3866, 6051 |
| AceIII | 10 | 2652, 4180, 5417, 749, 816, 849, 1170, 1503, 2152, 3111 |
| AciI | 80 | 83, 157, 243, 271, 283, 297, 464, 692, 774, 1301, 1474, 1477, 1811, 1838, 2358, 2370, 2379, 2391, 2401, 2412, 2458, 2593, 2782, 2849, 2899, 2985, 3200, 3351, 3374, 3503, 3625, 3628, 3930, 4033, 4123, 4285, 4313, 4440, 4459, 4580, 4825, 5193, 5284, 5521, 5686, 5763, 5872, 6018, 6114, 6402, 75, 555, 588, 713, 889, 1693, 1717, 1766, 1780, 1783, 2717, 2919, 2943, 2965, 3162, 3210, 3323, 3353, 3513, 3694, 4089, 4099, 4166, 4173, 4194, 4690, 4834, 5475, 5642, 5971 |
| AclI | 2 | 5355, 5728 |
| AcyI | 9 | 306, 359, 442, 628, 2597, 3565, 3669, 5666, 6048 |
| AflII | 1 | 145 |
| AflIII | 2 | 4240, 6281 |
| AgeI | 1 | 785 |
| AhaIII | 6 | 151, 4994, 5013, 5705, 6586, 6599 |
| AlfI | 2 | 2239, 2311 |
| AloI | 1 | 2031 |
| AluI | 39 | 143, 750, 817, 850, 922, 955, 993, 1171, 1330, 1504, 1546, 1729, 1896, 2153, 2473, 2527, 2537, 2653, 2685, 2727, 3112, 3337, 3402, 3431, 3743, 3876, 3882, 3904, 3999, 4063, 4181, 4407, 4497, 4543, 4800, 5318, 5418, 5481, 6187 |
| AlwNI | 2 | 4651, 6128 |
| ApaBI | 4 | 2249, 2321, 2873, 3149 |
| ApaLI | 5 | 2854, 3156, 4554, 5797, 6085 |
| ApoI | 6 | 1582, 2167, 2817, 3779, 6180, 6348 |
| AsuI | 16 | 268, 461, 970, 1371, 1427, 1990, 2973, 2982, 3124, 3523, 5172, 5251, 5268, 5490, 6270, 6439 |
| AvaI | 1 | 2531 |
| AvaII | 10 | 1427, 2982, 3523, 5268, 5490, 461, 970, 1371, 2973, 5172 |
| AvrII | 1 | 2510 |
| BaeI | 1 | 1149 |
| BalI | 3 | 799, 869, 2123 |
| BamHI | 1 | 78 |
| BbvI | 25 | 1037, 1321, 1328, 1544, 1802, 2651, 2909, 3302, 3429, 3741, 4647, 4650, 4853, 5547, 956, 1379, 1382, 2728, 2940, 4064, 4145, 4163, 4582, 5181, 6253 |
| BbvII | 1 | 1666 |
| BccI | 16 | 838, 1090, 1360, 1993, 2374, 5166, 5290, 5577, 1197, 1220, 1317, 1368, 1975, 2736, 3068, 3528 |
| Bce83I | 4 | 4608, 4346, 4882, 5750 |
| BcefI | 11 | 856, 916, 997, 1108, 1492, 1941, 3412, 4726, 2851, 3281, 3516 |
| BcgI | 2 | 899, 5646 |
| BciVI | 3 | 1746, 4449, 5973 |
| BclI | 2 | 161, 2561 |
| BetI | 12 | 785, 2795, 3332, 3468, 4446, 4593, 5421, 825, 948, 1176, 5210, 5663 |
| BfiI | 4 | 479, 2394, 5175, 6354 |
| BglI | 6 | 269, 391, 462, 792, 2125, 5244 |
| BglII | 1 | 6065 |
| BinI | 21 | 78, 2556, 3345, 3698, 4878, 4975, 5755, 6057, 79, 771, 1298, 1454, 3039, 3466, 3683, 4807, 4890, 4988, 5452, 5773, 6074 |
| BplI | 1 | 2454 |
| Bpu10I | 2 | 989, 6232 |
| BsaAI | 6 | 523, 1982, 2568, 3600, 6385, 6544 |
| BsaXI | 3 | 2632, 2031, 4093 |
| BseMII | 11 | 122, 4515, 4921, 5087, 6092, 990, 1066, 1712, 2470, 5627, 6162 |
| BsePI | 4 | 1124, 6404, 6413, 6415 |
| BseRI | 3 | 813, 2491, 6336 |
| BseSI | 7 | 834, 963, 2854, 3156, 4554, 5797, 6085 |
| BseYI | 6 | 2231, 2303, 3570, 1684, 1730, 4544 |
| BsgI | 3 | 1002, 1326, 941 |
| BsiI | 4 | 2674, 3153, 4413, 5794 |
| BsiYI | 19 | 228, 1418, 1490, 1759, 2085, 2412, 2789, 2852, 3139, 3248, 3469, 3689, 4082, 4256, 4274, 4440, 4719, 6384, 6420 |
| BsmI | 2 | 1612, 3809 |
| BsmAI | 4 | 614, 2637, 5962, 5197 |
| Bsp24I | 7 | 451, 3188, 3669, 4917, 1394, 3571, 6042 |
| Bsp1407I | 2 | 1249, 1507 |
| BspHI | 3 | 1255, 4957, 5965 |
| BspLU11I | 1 | 4240 |
| BspMI | 1 | 2878 |
| BspMII | 3 | 2795, 3332, 3468 |
| BsrI | 16 | 2068, 3055, 3220, 4643, 4656, 5601, 480, 2395, 4040, 4773, 5176, 5294, 5337, 5776, 6127, 6355 |
| BsrBI | 7 | 1838, 3930, 887, 2963, 3321, 4171, 5969 |
| BsrDI | 2 | 5184, 5366 |
| BstEII | 1 | 980 |
| BstXI | 1 | 838 |
| BtgZI | 7 | 859, 904, 1366, 3231, 6261, 534, 1994 |
| BtsI | 6 | 1004, 5523, 1608, 3805, 4027, 5551 |
| Cac8I | 38 | 269, 462, 776, 801, 919, 952, 1000, 1124, 1324, 1331, 1479, 1676, 1680, 1822, 1836, 1879, 2235, 2254, 2307, 2326, 2897, 3098, 3158, 3338, 3501, 3672, 4031, 4060, 4169, 4255, 4292, 4849, 5240, 6173, 6370, 6404, 6413, 6415 |
| CauII | 8 | 2531, 2532, 3359, 3475, 3665, 4619, 5312, 5663 |
| CdiI | 19 | 534, 1166, 1310, 1361, 1994, 2776, 5378, 860, 905, 1367, 2690, 2735, 3107, 3232, 3422, 3447, 3527, 5782, 6262 |
| CfrI | 10 | 799, 869, 1333, 2123, 2779, 2944, 3197, 3514, 4079, 5518 |
| Cfr10I | 9 | 785, 825, 948, 1176, 1479, 1879, 2912, 3672, 5210 |
| CjeI | 16 | 1241, 1394, 2480, 3571, 4267, 4822, 6042, 259, 452, 2277, 3004, 3189, 3670, 4743, 4821, 4918 |
| CjePI | 12 | 1394, 3571, 4773, 6042, 451, 3188, 3426, 3669, 4917, 5037, 5509, 6074 |
| CspCI | 1 | 573 |
| CstMI | 3 | 1191, 1841, 5483 |
| CviJI | 114 | 143, 166, 226, 268, 277, 461, 750, 800, 817, 850, 870, 922, 955, 970, 993, 1071, 1171, 1268, 1330, 1334, 1371, 1504, 1546, 1699, 1707, 1729, 1735, 1882, 1896, 1910, 1991, 2124, 2133, 2153, 2226, 2298, 2421, 2450, 2456, 2473, 2496, 2508, 2514, 2527, 2537, 2581, 2653, 2685, 2727, 2780, 2829, 2911, 2924, 2945, 2955, 2973, 3101, 3112, 3125, 3171, 3198, 3280, 3290, 3337, 3355, 3402, 3431, 3473, 3515, 3531, 3648, 3675, 3743, 3876, 3882, 3904, 3956, 3977, 3999, 4063, 4080, 4162, 4181, 4254, 4265, 4283, 4309, 4407, 4497, 4543, 4548, 4573, 4652, 4717, 4728, 4771, 4800, 5160, 5172, 5213, 5239, 5243, 5252, 5318, 5408, 5418, 5481, 5519, 6125, 6187, 6203, 6271, 6440, 6484 |
| CviRI | 34 | 942, 1003, 1327, 1543, 1611, 2248, 2257, 2320, 2329, 2444, 2520, 2650, 2774, 2841, 2855, 2872, 2908, 3157, 3341, 3428, 3740, 3808, 4066, 4555, 4848, 5183, 5273, 5466, 5554, 5798, 6086, 6218, 6468, 6580 |
| DdeI | 14 | 92, 122, 990, 1066, 1712, 2470, 2952, 4515, 4921, 5087, 5627, 6092, 6162, 6233 |
| DpnI | 35 | 79, 112, 162, 771, 1026, 1298, 1446, 1454, 2557, 2562, 2618, 2751, 2936, 2949, 3039, 3346, 3466, 3683, 3699, 4807, 4879, 4890, 4898, 4976, 4988, 5093, 5434, 5452, 5498, 5756, 5773, 5809, 6058, 6066, 6074 |
| DraII | 2 | 1426, 6438 |
| DraIII | 5 | 1242, 1982, 2857, 3150, 6382 |
| DrdI | 4 | 2025, 3072, 3453, 4342 |
| DsaI | 7 | 545, 796, 1490, 2417, 2926, 3282, 3351 |
| Eam1105I | 1 | 5125 |
| EciI | 10 | 1716, 691, 1300, 2369, 2390, 2400, 2411, 4312, 4458, 5283 |
| Eco31I | 1 | 5197 |
| Eco47III | 1 | 779 |
| Eco57I | 3 | 930, 4767, 5812 |
| Eco57MI | 9 | 930, 1461, 3221, 3275, 3708, 4767, 3687, 5215, 5812 |
| EcoNI | 1 | 1418 |
| EcoRI | 2 | 2817, 6348 |
| EcoRII | 18 | 274, 467, 842, 967, 977, 1079, 1154, 1208, 2223, 2278, 2295, 3979, 4267, 4388, 4401, 2531, 4619, 5663 |
| Esp3I | 1 | 2636 |
| FalI | 1 | 1284 |
| FauI | 17 | 82, 270, 296, 463, 1837, 2357, 2378, 2848, 2898, 3502, 4032, 75, 1783, 2717, 2965, 3694, 4089 |
| FnuDII | 34 | 74, 244, 1123, 1125, 1443, 1755, 1779, 1799, 2175, 2594, 2783, 2918, 3029, 3095, 3161, 3310, 3352, 3512, 3693, 4086, 4088, 4286, 4864, 5194, 5687, 6019, 6172, 6260, 6282, 6367, 6403, 6405, 6414, 6416 |
| Fnu4HI | 44 | 889, 956, 1037, 1321, 1328, 1379, 1382, 1476, 1544, 1766, 1780, 1802, 2457, 2651, 2728, 2781, 2909, 2940, 2943, 3199, 3302, 3350, 3353, 3429, 3513, 3627, 3741, 4064, 4145, 4163, 4166, 4284, 4439, 4582, 4647, 4650, 4853, 5181, 5520, 5547, 5642, 5871, 6113, 6253 |
| FokI | 14 | 1103, 1196, 1316, 1689, 2930, 3679, 839, 1076, 1205, 2375, 3330, 5110, 5291, 5578 |
| GdiII | 7 | 2779, 2944, 3514, 4079, 1333, 3197, 5518 |
| GsuI | 6 | 1461, 3221, 3275, 3708, 3687, 5215 |
| HaeI | 11 | 799, 869, 1267, 2123, 2507, 2923, 4253, 4264, 4716, 2972, 4079 |
| HaeII | 7 | 779, 1056, 1413, 1825, 1833, 4114, 4484 |
| HaeIII | 32 | 268, 461, 800, 870, 970, 1268, 1334, 1371, 1991, 2124, 2133, 2450, 2456, 2508, 2780, 2924, 2945, 2973, 3125, 3198, 3280, 3515, 4080, 4254, 4265, 4283, 4717, 5172, 5252, 5519, 6271, 6440 |
| HaeIV | 3 | 72, 3032, 5125 |
| HgaI | 12 | 72, 702, 3308, 3453, 3565, 3669, 4342, 4917, 6365, 2635, 3087, 5667 |
| HgiAI | 12 | 2854, 3156, 4554, 5712, 5797, 6085, 1085, 1414, 1756, 1826, 1834, 6020 |
| HgiCI | 7 | 650, 833, 1179, 1943, 3148, 3984, 5078 |
| HgiJII | 3 | 1698, 1734, 1909 |
| HhaI | 42 | 780, 1057, 1085, 1124, 1126, 1414, 1442, 1756, 1769, 1778, 1800, 1826, 1834, 2731, 2784, 3028, 3096, 3311, 3438, 3511, 3692, 4022, 4087, 4115, 4148, 4418, 4485, 4585, 4759, 4865, 5258, 5351, 5688, 6020, 6171, 6251, 6368, 6404, 6406, 6413, 6415, 6417 |
| Hin4I | 6 | 72, 2631, 3032, 3165, 5125, 5199 |
| HindII | 3 | 3408, 3866, 6051 |
| HindIII | 1 | 142 |
| HinfI | 19 | 103, 595, 1160, 2032, 2054, 2670, 2792, 2992, 3243, 3618, 3655, 4075, 4140, 4215, 4611, 5125, 6226, 6294, 6454 |
| HpaII | 26 | 786, 826, 949, 1177, 1480, 1880, 2532, 2796, 2913, 3146, 3333, 3359, 3469, 3475, 3665, 3673, 3958, 4447, 4594, 4620, 4810, 5211, 5245, 5312, 5422, 5664 |
| HphI | 14 | 549, 980, 1133, 1157, 1286, 1972, 5604, 5845, 823, 1486, 2590, 4981, 5208, 5830 |
| Hpy99I | 21 | 2596, 3092, 3452, 3564, 3865, 4341, 5132, 5395, 6050, 6053, 1127, 1475, 1478, 1878, 2732, 2850, 3349, 3548, 3626, 3671, 6407 |
| Hpy178III | 28 | 106, 1051, 1255, 1294, 1468, 2479, 2605, 2788, 2795, 3104, 3184, 3274, 3332, 3383, 3468, 3520, 4044, 4473, 4607, 4705, 4803, 4883, 4957, 5216, 5965, 6060, 6070, 6259 |
| Hpy188I | 23 | 768, 1711, 1925, 2469, 2554, 2559, 2615, 2640, 2658, 2980, 3398, 3463, 3581, 3652, 4352, 4430, 4783, 4914, 5049, 5495, 5506, 5626, 6107 |
| Ksp632I | 3 | 4118, 5919, 6434 |
| MaeI | 12 | 777, 1521, 1617, 1739, 1831, 2511, 3814, 3874, 3878, 4735, 4985, 5320 |
| MaeII | 21 | 307, 319, 360, 443, 524, 629, 1873, 1983, 2026, 2038, 2569, 2598, 2868, 3601, 4940, 5356, 5729, 6049, 6386, 6545, 6550 |
| MaeIII | 22 | 23, 247, 334, 683, 981, 1470, 1557, 1795, 1807, 2865, 3754, 4597, 4660, 4776, 5056, 5387, 5445, 5598, 5786, 6388, 6398, 6547 |
| MboI | 35 | 79, 112, 162, 771, 1026, 1298, 1446, 1454, 2557, 2562, 2618, 2751, 2936, 2949, 3039, 3346, 3466, 3683, 3699, 4807, 4879, 4890, 4898, 4976, 4988, 5093, 5434, 5452, 5498, 5756, 5773, 5809, 6058, 6066, 6074 |
| MboII | 18 | 1666, 2667, 4738, 4887, 6223, 6434, 1048, 1093, 1096, 1853, 3268, 3271, 3715, 4119, 4978, 5733, 5811, 5920 |
| McrI | 10 | 787, 2779, 2914, 2935, 2944, 3514, 4153, 4577, 5497, 5646 |
| MfeI | 1 | 6214 |
| MluI | 1 | 6281 |
| MmeI | 6 | 2640, 3174, 4430, 4614, 2028, 6151 |
| MnlI | 46 | 168, 1947, 2461, 2467, 3152, 3686, 3871, 4129, 4412, 5287, 5493, 6324, 733, 813, 894, 900, 1068, 1101, 1131, 1143, 1194, 1314, 1516, 1714, 2448, 2454, 2491, 2494, 2506, 2661, 2698, 2922, 3129, 3228, 3255, 3278, 3326, 3584, 4096, 4355, 4679, 5076, 5157, 6155, 6336, 6437 |
| MseI | 25 | 146, 152, 192, 1774, 2045, 2143, 2160, 2171, 2181, 4011, 4070, 4943, 4995, 5000, 5014, 5067, 5302, 5341, 5706, 6122, 6184, 6287, 6507, 6587, 6600 |
| MslI | 9 | 546, 824, 839, 974, 1280, 1655, 5378, 5537, 5896 |
| MstI | 1 | 5350 |
| MwoI | 49 | 269, 391, 423, 462, 555, 579, 792, 883, 889, 943, 956, 1000, 1009, 1684, 1708, 1769, 1771, 1813, 1840, 1870, 2125, 2249, 2321, 2372, 2451, 2457, 2775, 2842, 2873, 2925, 2934, 2956, 2965, 3087, 3149, 3302, 3329, 3429, 3978, 4022, 4106, 4173, 4287, 4856, 5244, 6244, 6404, 6406, 6408 |
| NaeI | 3 | 1479, 1879, 3672 |
| NcoI | 4 | 545, 796, 2417, 2926 |
| NdeI | 3 | 11, 418, 3023 |
| NheI | 1 | 776 |
| NlaIII | 29 | 486, 546, 797, 1031, 1061, 1256, 1451, 1496, 1655, 1681, 2255, 2327, 2418, 2927, 3010, 3045, 3704, 3852, 3895, 4241, 4958, 5449, 5459, 5537, 5573, 5966, 6220, 6345, 6451 |
| NlaIV | 22 | 78, 650, 833, 1179, 1427, 1910, 1922, 1943, 2226, 2298, 3148, 3171, 3355, 3471, 3984, 4270, 4309, 5078, 5172, 5213, 5424, 6014 |
| NruI | 1 | 6259 |
| NspI | 4 | 1680, 2254, 2326, 4240 |
| NspBII | 10 | 157, 1329, 1728, 2899, 3208, 3351, 4062, 4580, 4825, 5763 |
| OliI | 2 | 824, 974 |
| PflMI | 1 | 1490 |
| PfoI | 2 | 1078, 3664 |
| PleI | 7 | 2032, 4611, 595, 2054, 4140, 5125, 6294 |
| PmaCI | 3 | 2568, 3600, 6385 |
| PmeI | 1 | 150 |
| PpiI | 6 | 4928, 813, 1131, 2032, 3228, 5771 |
| PpuMI | 1 | 1426 |
| PshAI | 1 | 2597 |
| PsiI | 3 | 1549, 2110, 3746 |
| PstI | 1 | 2907 |
| PvuI | 2 | 2935, 5497 |
| PvuII | 3 | 1329, 1728, 4062 |
| RleAI | 2 | 1240, 1661 |
| RsaI | 17 | 96, 119, 403, 428, 483, 516, 567, 724, 1226, 1250, 1508, 3490, 3543, 5609, 6096, 6266, 6536 |
| RsrII | 1 | 2981 |
| SacII | 1 | 3351 |
| SalI | 2 | 3866, 6051 |
| SapI | 1 | 4117 |
| SauI | 1 | 1065 |
| ScaI | 4 | 95, 118, 3542, 5608 |
| ScrFI | 23 | 274, 467, 842, 967, 977, 1079, 1154, 1208, 2223, 2278, 2295, 2531, 2532, 3359, 3475, 3665, 3979, 4267, 4388, 4401, 4619, 5312, 5663 |
| SduI | 11 | 834, 963, 1698, 1734, 1909, 2854, 3156, 4554, 5712, 5797, 6085 |
| SecI | 23 | 545, 796, 966, 976, 1129, 1153, 1208, 1423, 1490, 2222, 2294, 2417, 2452, 2510, 2531, 2926, 3127, 3282, 3351, 3582, 3979, 4400, 6420 |
| SexAI | 2 | 2277, 4618 |
| SfaNI | 23 | 1165, 1279, 1483, 1575, 2258, 2330, 2775, 2842, 3329, 3772, 4328, 5377, 5817, 552, 906, 1690, 2648, 2931, 3116, 3426, 3448, 5587, 6110 |
| SfeI | 7 | 183, 1761, 2907, 4505, 4696, 5371, 6300 |
| SfiI | 1 | 2124 |
| SgfI | 1 | 2934 |
| SgrAI | 1 | 824 |
| SimI | 9 | 211, 3443, 4911, 292, 926, 1428, 1951, 4433, 5199 |
| SmaI | 1 | 2531 |
| SmlI | 5 | 145, 4346, 4608, 4882, 5750 |
| SnaBI | 1 | 523 |
| SphI | 3 | 1680, 2254, 2326 |
| SspI | 1 | 5932 |
| Sth132I | 51 | 82, 270, 296, 463, 1023, 1386, 1837, 1889, 2357, 2378, 2531, 2789, 2848, 2898, 3138, 3502, 4032, 4367, 4566, 4575, 4619, 5130, 5663, 6031, 6071, 76, 209, 601, 664, 1784, 1906, 2533, 2718, 2966, 3239, 3360, 3476, 3485, 3666, 3695, 4045, 4090, 4474, 4909, 5154, 5313, 5676, 5737, 6061, 6269, 6427 |
| StuI | 1 | 2507 |
| StyI | 10 | 545, 796, 1423, 2417, 2510, 2926, 6420, 1490, 2222, 2294 |
| TaqI | 22 | 39, 101, 114, 170, 1099, 1141, 1168, 1312, 1949, 2605, 2620, 2629, 2689, 3106, 3319, 3421, 3446, 3616, 3867, 4340, 5781, 6052 |
| TatI | 14 | 95, 118, 402, 482, 515, 566, 1225, 1249, 1507, 3542, 5608, 6095, 6535, 3489 |
| TauI | 19 | 889, 1476, 1766, 1780, 2457, 2781, 2943, 3199, 3350, 3353, 3513, 3627, 4166, 4284, 4439, 5520, 5642, 5871, 6113 |
| TfiI | 17 | 103, 1160, 2670, 2792, 2992, 3243, 3618, 3655, 4075, 4215, 6226, 6454, 595, 2054, 4140, 5125, 6294 |
| TseI | 36 | 956, 1037, 1321, 1328, 1379, 1382, 1544, 1802, 2651, 2728, 2909, 2940, 3302, 3429, 3741, 4064, 4145, 4163, 4582, 4647, 4650, 4853, 5181, 5547, 6253, 1476, 2457, 2781, 3199, 3350, 3627, 4284, 4439, 5520, 5871, 6113 |
| Tsp45I | 9 | 981, 1470, 1807, 2865, 5387, 5598, 6388, 6398, 6547 |
| Tsp4CI | 18 | 20, 173, 259, 381, 452, 726, 764, 2008, 3063, 3078, 3480, 3863, 4202, 4273, 4743, 5053, 5568, 6515 |
| TspDTI | 12 | 1032, 2574, 3637, 4073, 5006, 6221, 6346, 936, 3021, 5108, 5411, 6460 |
| TspEI | 26 | 204, 1583, 2168, 2179, 2183, 2265, 2337, 2429, 2818, 3417, 3780, 3921, 3938, 4013, 4998, 5304, 5559, 6181, 6215, 6318, 6349, 6499, 6505, 6509, 6564, 6591 |
| TspGWI | 6 | 3189, 5897, 6055, 6391, 3090, 5580 |
| TspRI | 30 | 1005, 1608, 3054, 3083, 3805, 4027, 4136, 4642, 4655, 4923, 5072, 5177, 5524, 5551, 6356, 1003, 1606, 3052, 3081, 3803, 4025, 4134, 4640, 4653, 4921, 5070, 5175, 5522, 5549, 6354 |
| Tth111I | 2 | 2631, 3075 |
| Tth111II | 5 | 4814, 4850, 2803, 4844, 6142 |
| VspI | 6 | 191, 2180, 4010, 4069, 5301, 6506 |
| XhoII | 12 | 78, 770, 1297, 2556, 3698, 4878, 4889, 4975, 4987, 5755, 5772, 6065 |
| XmaIII | 3 | 2779, 2944, 3514 |
| XmnI | 2 | 2178, 5725 |
