| Name | Freq | Positions |
|---|
| AatII | 5 | 121, 174, 257, 443, 4942 |
| AccI | 3 | 2753, 2760, 4945 |
| AceIII | 4 | 3074, 4311, 564, 1215 |
| AciI | 69 | 58, 86, 98, 112, 279, 507, 589, 707, 874, 901, 1421, 1433, 1442, 1454, 1464, 1475, 1521, 1692, 1755, 2257, 2302, 2368, 2394, 2519, 2522, 2824, 2927, 3017, 3179, 3207, 3334, 3353, 3474, 3719, 4087, 4178, 4415, 4580, 4657, 4766, 4912, 5008, 370, 403, 528, 703, 756, 780, 829, 843, 846, 1849, 1913, 2014, 2017, 2297, 2352, 2450, 2588, 2983, 2993, 3060, 3067, 3088, 3584, 3728, 4369, 4536, 4865 |
| AclI | 2 | 4249, 4622 |
| AcyI | 9 | 121, 174, 257, 443, 1782, 2484, 2563, 4560, 4942 |
| AflIII | 2 | 3134, 5175 |
| AhaIII | 3 | 3888, 3907, 4599 |
| AlfI | 2 | 1302, 1374 |
| AloI | 2 | 577, 1094 |
| AluI | 25 | 565, 649, 792, 959, 1216, 1536, 1590, 1600, 1888, 2346, 2637, 2770, 2776, 2798, 2893, 2957, 3075, 3301, 3391, 3437, 3694, 4212, 4312, 4375, 5081 |
| AlwNI | 2 | 3545, 5022 |
| ApaBI | 2 | 1312, 1384 |
| ApaLI | 3 | 3448, 4691, 4979 |
| ApoI | 3 | 1230, 2673, 5074 |
| AsuI | 9 | 83, 276, 1053, 2299, 4066, 4145, 4162, 4384, 5164 |
| AsuII | 1 | 2464 |
| AvaI | 1 | 1594 |
| AvaII | 6 | 2299, 4162, 4384, 83, 276, 4066 |
| AvrII | 1 | 1573 |
| BalI | 1 | 1863 |
| BamHI | 1 | 584 |
| BbvI | 18 | 865, 1844, 1886, 2407, 2635, 3541, 3544, 3747, 4441, 1743, 1927, 2020, 2958, 3039, 3057, 3476, 4075, 5147 |
| BbvII | 1 | 729 |
| BccI | 10 | 1056, 1437, 1995, 2497, 4060, 4184, 4471, 1038, 1667, 2095 |
| Bce83I | 5 | 3502, 2174, 3240, 3776, 4644 |
| BcefI | 4 | 1004, 2193, 3620, 1757 |
| BcgI | 1 | 4540 |
| BciVI | 4 | 809, 1991, 3343, 4867 |
| BclI | 1 | 1624 |
| BetI | 6 | 1814, 3340, 3487, 4315, 4104, 4557 |
| BfiI | 4 | 1722, 294, 1457, 4069 |
| BglI | 4 | 84, 206, 277, 4138 |
| BglII | 1 | 4959 |
| BinI | 21 | 584, 660, 678, 1619, 1643, 1954, 2200, 2592, 3772, 3869, 4649, 4951, 585, 2033, 2577, 3701, 3784, 3882, 4346, 4667, 4968 |
| BplI | 2 | 1517, 2448 |
| Bpu10I | 1 | 5126 |
| BsaAI | 3 | 338, 1045, 2085 |
| BsaBI | 1 | 1638 |
| BsaXI | 2 | 1094, 2987 |
| BseMII | 11 | 628, 3409, 3815, 3981, 4986, 598, 775, 1533, 2446, 4521, 5056 |
| BsePI | 1 | 2180 |
| BseRI | 1 | 1554 |
| BseSI | 5 | 1725, 1818, 3448, 4691, 4979 |
| BseYI | 6 | 1294, 1366, 747, 793, 2287, 3438 |
| BsiI | 4 | 2501, 2375, 3307, 4688 |
| BsiYI | 12 | 43, 822, 1148, 1475, 1758, 2302, 2583, 2976, 3150, 3168, 3334, 3613 |
| BsmI | 1 | 2703 |
| BsmAI | 4 | 429, 4856, 1631, 4091 |
| Bsp24I | 4 | 266, 2563, 3811, 4936 |
| BspHI | 2 | 3851, 4859 |
| BspLU11I | 1 | 3134 |
| BspMI | 3 | 2042, 2492, 1679 |
| BsrI | 15 | 1131, 1722, 1923, 3537, 3550, 4495, 295, 1458, 2934, 3667, 4070, 4188, 4231, 4670, 5021 |
| BsrBI | 6 | 901, 2394, 2824, 2448, 3065, 4863 |
| BsrDI | 3 | 2009, 4078, 4260 |
| BtgZI | 6 | 2220, 5155, 349, 1057, 2069, 2413 |
| BtsI | 4 | 4417, 2699, 2921, 4445 |
| Cac8I | 30 | 84, 277, 739, 743, 885, 899, 942, 1298, 1317, 1370, 1389, 1675, 1861, 2080, 2146, 2152, 2180, 2184, 2225, 2229, 2283, 2566, 2925, 2954, 3063, 3149, 3186, 3743, 4134, 5067 |
| CauII | 8 | 1594, 1595, 1786, 1946, 2559, 3513, 4206, 4557 |
| CdiI | 10 | 349, 1057, 2069, 2074, 2272, 2413, 4272, 2221, 4676, 5156 |
| CfrI | 7 | 704, 1689, 1863, 2254, 2281, 2973, 4412 |
| Cfr10I | 5 | 942, 2102, 2283, 2566, 4104 |
| CjeI | 11 | 1543, 3161, 3716, 4936, 74, 267, 1340, 2564, 3637, 3715, 3812 |
| CjePI | 8 | 3667, 4936, 266, 2563, 3811, 3931, 4403, 4968 |
| CspCI | 1 | 388 |
| CstMI | 2 | 904, 4377 |
| CviJI | 93 | 41, 83, 92, 276, 565, 649, 705, 762, 770, 792, 798, 945, 959, 973, 1054, 1196, 1216, 1289, 1361, 1484, 1513, 1519, 1536, 1559, 1571, 1577, 1590, 1600, 1690, 1707, 1715, 1742, 1767, 1851, 1860, 1864, 1888, 1926, 2002, 2019, 2038, 2101, 2145, 2155, 2172, 2255, 2282, 2286, 2323, 2346, 2362, 2542, 2569, 2637, 2770, 2776, 2798, 2850, 2871, 2893, 2957, 2974, 3056, 3075, 3148, 3159, 3177, 3203, 3301, 3391, 3437, 3442, 3467, 3546, 3611, 3622, 3665, 3694, 4054, 4066, 4107, 4133, 4137, 4146, 4212, 4302, 4312, 4375, 4413, 5019, 5081, 5097, 5165 |
| CviRI | 22 | 1311, 1320, 1383, 1392, 1507, 1583, 1674, 1833, 2008, 2022, 2634, 2702, 2960, 3449, 3742, 4077, 4167, 4360, 4448, 4692, 4980, 5112 |
| DdeI | 12 | 598, 628, 775, 1533, 2446, 3409, 3815, 3981, 4521, 4986, 5056, 5127 |
| DpnI | 30 | 585, 618, 661, 679, 1620, 1625, 1644, 1955, 2033, 2114, 2123, 2201, 2577, 2593, 3701, 3773, 3784, 3792, 3870, 3882, 3987, 4328, 4346, 4392, 4650, 4667, 4703, 4952, 4960, 4968 |
| DraIII | 1 | 1045 |
| DrdI | 3 | 1088, 1804, 3236 |
| DsaI | 4 | 360, 580, 1480, 2215 |
| Eam1105I | 1 | 4019 |
| EciI | 10 | 779, 2296, 506, 1432, 1453, 1463, 1474, 3206, 3352, 4177 |
| Eco31I | 1 | 4091 |
| Eco57I | 4 | 1908, 2340, 3661, 4706 |
| Eco57MI | 7 | 1908, 2340, 2602, 3661, 2581, 4109, 4706 |
| EcoRII | 14 | 89, 282, 1286, 1341, 1358, 2169, 2873, 3161, 3282, 3295, 1594, 1786, 3513, 4557 |
| FalI | 1 | 2100 |
| FauI | 13 | 85, 111, 278, 588, 900, 1420, 1441, 2926, 846, 1913, 2450, 2588, 2983 |
| FnuDII | 19 | 59, 818, 842, 862, 1238, 1848, 2149, 2181, 2587, 2980, 2982, 3180, 3758, 4088, 4581, 4913, 5066, 5154, 5176 |
| Fnu4HI | 39 | 703, 706, 829, 843, 865, 1520, 1691, 1743, 1754, 1844, 1849, 1886, 1927, 2014, 2017, 2020, 2256, 2352, 2393, 2407, 2521, 2635, 2958, 3039, 3057, 3060, 3178, 3333, 3476, 3541, 3544, 3747, 4075, 4414, 4441, 4536, 4765, 5007, 5147 |
| FokI | 9 | 752, 1637, 2094, 2119, 2573, 1438, 4004, 4185, 4472 |
| GdiII | 6 | 704, 1689, 2973, 2254, 2281, 4412 |
| GsuI | 3 | 2602, 2581, 4109 |
| HaeI | 6 | 1570, 1863, 3147, 3158, 3610, 2973 |
| HaeII | 5 | 888, 896, 1782, 3008, 3378 |
| HaeIII | 21 | 83, 276, 705, 1054, 1196, 1513, 1519, 1571, 1690, 1864, 2255, 2282, 2974, 3148, 3159, 3177, 3611, 4066, 4146, 4413, 5165 |
| HaeIV | 2 | 1955, 4019 |
| HgaI | 6 | 517, 2484, 2563, 3236, 3811, 4561 |
| HgiAI | 11 | 1892, 2082, 3448, 4606, 4691, 4979, 819, 889, 897, 1783, 4914 |
| HgiCI | 6 | 465, 1006, 1782, 1817, 2878, 3972 |
| HgiJII | 4 | 761, 797, 972, 2144 |
| HhaI | 30 | 819, 832, 841, 863, 889, 897, 1775, 1783, 1847, 1884, 2150, 2180, 2182, 2410, 2586, 2916, 2981, 3009, 3042, 3312, 3379, 3479, 3653, 3759, 4152, 4245, 4582, 4914, 5065, 5145 |
| Hin4I | 4 | 1955, 4019, 4093, 1985 |
| HindII | 3 | 2760, 4945, 5179 |
| HindIII | 1 | 648 |
| HinfI | 15 | 410, 609, 1095, 1117, 2268, 2402, 2454, 2512, 2549, 2969, 3034, 3109, 3505, 4019, 5120 |
| HpaII | 22 | 943, 1595, 1688, 1765, 1787, 1815, 1946, 2036, 2103, 2284, 2559, 2567, 2852, 3341, 3488, 3514, 3704, 4105, 4139, 4206, 4316, 4558 |
| HphI | 8 | 364, 1035, 4498, 4739, 1969, 3875, 4102, 4724 |
| Hpy99I | 16 | 1869, 1897, 2191, 2206, 2483, 2759, 3235, 4026, 4289, 4944, 4947, 941, 1756, 2392, 2520, 2565 |
| Hpy178III | 25 | 612, 725, 1542, 1627, 1800, 2116, 2125, 2208, 2264, 2308, 2398, 2431, 2500, 2938, 3367, 3501, 3599, 3697, 3777, 3851, 4110, 4859, 4954, 4964, 5153 |
| Hpy188I | 18 | 774, 988, 1532, 1617, 1622, 1748, 2092, 2445, 2546, 3246, 3324, 3677, 3808, 3943, 4389, 4400, 4520, 5001 |
| Ksp632I | 4 | 3012, 4813, 2132, 2342 |
| MaeI | 11 | 726, 802, 894, 1574, 2708, 2768, 2772, 3629, 3879, 4214, 5197 |
| MaeII | 16 | 122, 134, 175, 258, 339, 444, 936, 1046, 1089, 1101, 1899, 2086, 3834, 4250, 4623, 4943 |
| MaeIII | 16 | 62, 149, 498, 858, 870, 1904, 2210, 2648, 3491, 3554, 3670, 3950, 4281, 4339, 4492, 4680 |
| MboI | 30 | 585, 618, 661, 679, 1620, 1625, 1644, 1955, 2033, 2114, 2123, 2201, 2577, 2593, 3701, 3773, 3784, 3792, 3870, 3882, 3987, 4328, 4346, 4392, 4650, 4667, 4703, 4952, 4960, 4968 |
| MboII | 14 | 729, 2132, 2342, 3632, 3781, 5117, 916, 2442, 2609, 3013, 3872, 4627, 4705, 4814 |
| McrI | 6 | 704, 1689, 3047, 3471, 4391, 4540 |
| MfeI | 1 | 5108 |
| MluI | 1 | 5175 |
| MmeI | 4 | 3324, 3508, 1091, 5045 |
| MnlI | 28 | 711, 1010, 1524, 1530, 2374, 2580, 2765, 3023, 3306, 4181, 4387, 548, 777, 1511, 1517, 1554, 1557, 1569, 1641, 1705, 1841, 2198, 2990, 3249, 3573, 3970, 4051, 5049 |
| MseI | 20 | 7, 652, 837, 1108, 1206, 1223, 1234, 1244, 2905, 2964, 3837, 3889, 3894, 3908, 3961, 4196, 4235, 4600, 5016, 5078 |
| MslI | 5 | 361, 2216, 4272, 4431, 4790 |
| MstI | 2 | 1883, 4244 |
| MwoI | 35 | 84, 206, 238, 277, 370, 394, 747, 771, 832, 834, 876, 903, 933, 1312, 1384, 1435, 1514, 1520, 1768, 1852, 1875, 2014, 2020, 2137, 2173, 2220, 2487, 2872, 2916, 3000, 3067, 3181, 3750, 4138, 5138 |
| NaeI | 3 | 942, 2283, 2566 |
| NarI | 1 | 1782 |
| NcoI | 3 | 360, 1480, 2215 |
| NdeI | 1 | 233 |
| NlaIII | 22 | 301, 361, 744, 1318, 1390, 1481, 1654, 1999, 2185, 2216, 2242, 2598, 2746, 2789, 3135, 3852, 4343, 4353, 4431, 4467, 4860, 5114 |
| NlaIV | 17 | 465, 584, 973, 985, 1006, 1289, 1361, 1782, 1817, 2878, 3164, 3203, 3972, 4066, 4107, 4318, 4908 |
| NotI | 1 | 703 |
| NruI | 1 | 5153 |
| NspI | 5 | 743, 1317, 1389, 2184, 3134 |
| NspBII | 6 | 791, 1887, 2956, 3474, 3719, 4657 |
| PfoI | 1 | 2558 |
| PleI | 7 | 1095, 3505, 410, 1117, 2454, 3034, 4019 |
| PpiI | 3 | 3822, 1095, 4665 |
| PsiI | 2 | 1173, 2640 |
| PstI | 1 | 1832 |
| PvuI | 1 | 4391 |
| PvuII | 3 | 791, 1887, 2956 |
| RsaI | 12 | 218, 243, 298, 331, 382, 539, 602, 625, 2088, 4503, 4990, 5160 |
| RsrII | 1 | 2298 |
| SalI | 2 | 2760, 4945 |
| SapI | 3 | 3011, 2132, 2342 |
| ScaI | 3 | 601, 624, 4502 |
| ScrFI | 18 | 89, 282, 1286, 1341, 1358, 1594, 1595, 1786, 1946, 2169, 2559, 2873, 3161, 3282, 3295, 3513, 4206, 4557 |
| SduI | 12 | 761, 797, 972, 1725, 1818, 1892, 2082, 2144, 3448, 4606, 4691, 4979 |
| SecI | 12 | 360, 580, 1285, 1357, 1480, 1515, 1573, 1594, 1946, 2215, 2873, 3294 |
| SexAI | 2 | 1340, 3512 |
| SfaNI | 16 | 1321, 1393, 2073, 2137, 2412, 2666, 3222, 4271, 4711, 367, 753, 1751, 2006, 2222, 4481, 5004 |
| SfeI | 5 | 824, 1832, 3399, 3590, 4265 |
| SimI | 7 | 26, 3805, 107, 1014, 2212, 3327, 4093 |
| SmaI | 1 | 1594 |
| SmlI | 5 | 2174, 3240, 3502, 3776, 4644 |
| SnaBI | 1 | 338 |
| SpeI | 1 | 5196 |
| SphI | 4 | 743, 1317, 1389, 2184 |
| SspI | 1 | 4826 |
| Sth132I | 43 | 85, 111, 278, 588, 900, 952, 1420, 1441, 1594, 1786, 2189, 2328, 2399, 2926, 3261, 3460, 3469, 3513, 4024, 4557, 4925, 4965, 416, 479, 847, 969, 1596, 1872, 1914, 1947, 2451, 2560, 2589, 2939, 2984, 3368, 3803, 4048, 4207, 4570, 4631, 4955, 5163 |
| StuI | 1 | 1570 |
| StyI | 6 | 360, 1480, 1573, 2215, 1285, 1357 |
| TaqI | 15 | 607, 620, 713, 1012, 1896, 2052, 2076, 2112, 2274, 2465, 2510, 2761, 3234, 4675, 4946 |
| TatI | 8 | 217, 297, 330, 381, 601, 624, 4502, 4989 |
| TauI | 21 | 703, 706, 829, 843, 1520, 1691, 1754, 1849, 2014, 2017, 2256, 2352, 2393, 2521, 3060, 3178, 3333, 4414, 4536, 4765, 5007 |
| TfiI | 13 | 609, 2268, 2402, 2512, 2549, 2969, 3109, 5120, 410, 1117, 2454, 3034, 4019 |
| TseI | 30 | 865, 1743, 1844, 1886, 1927, 2020, 2407, 2635, 2958, 3039, 3057, 3476, 3541, 3544, 3747, 4075, 4441, 5147, 706, 1520, 1691, 1754, 2256, 2393, 2521, 3178, 3333, 4414, 4765, 5007 |
| Tsp45I | 5 | 870, 1904, 2210, 4281, 4492 |
| Tsp4CI | 16 | 74, 196, 267, 541, 579, 716, 1071, 2161, 2277, 2385, 2757, 3096, 3167, 3637, 3947, 4462 |
| TspDTI | 10 | 1827, 2531, 2967, 3900, 5115, 36, 672, 2270, 4002, 4305 |
| TspEI | 16 | 19, 1231, 1242, 1246, 1328, 1400, 1492, 2674, 2815, 2832, 2907, 3892, 4198, 4453, 5075, 5109 |
| TspGWI | 3 | 4791, 4949, 4474 |
| TspRI | 22 | 1906, 2699, 2921, 3030, 3536, 3549, 3817, 3966, 4071, 4418, 4445, 1904, 2697, 2919, 3028, 3534, 3547, 3815, 3964, 4069, 4416, 4443 |
| Tth111I | 1 | 1898 |
| Tth111II | 5 | 3708, 3744, 2228, 3738, 5036 |
| VspI | 5 | 6, 1243, 2904, 2963, 4195 |
| XbaI | 1 | 725 |
| XhoII | 14 | 584, 660, 678, 1619, 1954, 2200, 2592, 3772, 3783, 3869, 3881, 4649, 4666, 4959 |
| XmaIII | 2 | 704, 1689 |
| XmnI | 2 | 1241, 4619 |
