| Name | Freq | Positions |
|---|
| AatII | 6 | 121, 174, 257, 443, 1660, 5111 |
| AccI | 3 | 2922, 2929, 5114 |
| AceIII | 6 | 1715, 3243, 4480, 564, 1215, 2174 |
| AciI | 74 | 58, 86, 98, 112, 279, 507, 589, 707, 874, 901, 1421, 1433, 1442, 1454, 1464, 1475, 1521, 1656, 1845, 1912, 1962, 2048, 2263, 2414, 2437, 2566, 2688, 2691, 2993, 3096, 3186, 3348, 3376, 3503, 3522, 3643, 3888, 4256, 4347, 4584, 4749, 4826, 4935, 5081, 5177, 370, 403, 528, 703, 756, 780, 829, 843, 846, 1780, 1982, 2006, 2028, 2225, 2273, 2386, 2416, 2576, 2757, 3152, 3162, 3229, 3236, 3257, 3753, 3897, 4538, 4705, 5034 |
| AclI | 2 | 4418, 4791 |
| AcyI | 9 | 121, 174, 257, 443, 1660, 2628, 2732, 4729, 5111 |
| AflIII | 2 | 3303, 5344 |
| AhaIII | 3 | 4057, 4076, 4768 |
| AlfI | 2 | 1302, 1374 |
| AloI | 2 | 577, 1094 |
| AluI | 30 | 565, 649, 792, 959, 1216, 1536, 1590, 1600, 1716, 1748, 1790, 2175, 2400, 2465, 2494, 2806, 2939, 2945, 2967, 3062, 3126, 3244, 3470, 3560, 3606, 3863, 4381, 4481, 4544, 5250 |
| AlwNI | 2 | 3714, 5191 |
| ApaBI | 4 | 1312, 1384, 1936, 2212 |
| ApaLI | 5 | 1917, 2219, 3617, 4860, 5148 |
| ApoI | 4 | 1230, 1880, 2842, 5243 |
| AsuI | 12 | 83, 276, 1053, 2036, 2045, 2187, 2586, 4235, 4314, 4331, 4553, 5333 |
| AvaI | 1 | 1594 |
| AvaII | 8 | 2045, 2586, 4331, 4553, 83, 276, 2036, 4235 |
| AvrII | 1 | 1573 |
| BalI | 1 | 1186 |
| BamHI | 1 | 584 |
| BbvI | 18 | 865, 1714, 1972, 2365, 2492, 2804, 3710, 3713, 3916, 4610, 1791, 2003, 3127, 3208, 3226, 3645, 4244, 5316 |
| BbvII | 1 | 729 |
| BccI | 9 | 1056, 1437, 4229, 4353, 4640, 1038, 1799, 2131, 2591 |
| Bce83I | 4 | 3671, 3409, 3945, 4813 |
| BcefI | 6 | 1004, 2475, 3789, 1914, 2344, 2579 |
| BcgI | 1 | 4709 |
| BciVI | 3 | 809, 3512, 5036 |
| BclI | 1 | 1624 |
| BetI | 8 | 1858, 2395, 2531, 3509, 3656, 4484, 4273, 4726 |
| BfiI | 3 | 294, 1457, 4238 |
| BglI | 5 | 84, 206, 277, 1188, 4307 |
| BglII | 1 | 5128 |
| BinI | 20 | 584, 660, 678, 1619, 2408, 2761, 3941, 4038, 4818, 5120, 585, 2102, 2529, 2746, 3870, 3953, 4051, 4515, 4836, 5137 |
| BplI | 1 | 1517 |
| Bpu10I | 1 | 5295 |
| BsaAI | 4 | 338, 1045, 1631, 2663 |
| BsaXI | 3 | 1695, 1094, 3156 |
| BseMII | 10 | 628, 3578, 3984, 4150, 5155, 598, 775, 1533, 4690, 5225 |
| BseRI | 1 | 1554 |
| BseSI | 5 | 1917, 2219, 3617, 4860, 5148 |
| BseYI | 6 | 1294, 1366, 2633, 747, 793, 3607 |
| BsiI | 4 | 1737, 2216, 3476, 4857 |
| BsiYI | 15 | 43, 822, 1148, 1475, 1852, 1915, 2202, 2311, 2532, 2752, 3145, 3319, 3337, 3503, 3782 |
| BsmI | 1 | 2872 |
| BsmAI | 4 | 429, 1700, 5025, 4260 |
| Bsp24I | 6 | 266, 2251, 2732, 3980, 2634, 5105 |
| BspHI | 2 | 4020, 5028 |
| BspLU11I | 1 | 3303 |
| BspMI | 1 | 1941 |
| BspMII | 3 | 1858, 2395, 2531 |
| BsrI | 15 | 1131, 2118, 2283, 3706, 3719, 4664, 295, 1458, 3103, 3836, 4239, 4357, 4400, 4839, 5190 |
| BsrBI | 6 | 901, 2993, 2026, 2384, 3234, 5032 |
| BsrDI | 2 | 4247, 4429 |
| BtgZI | 4 | 2294, 5324, 349, 1057 |
| BtsI | 4 | 4586, 2868, 3090, 4614 |
| Cac8I | 25 | 84, 277, 739, 743, 885, 899, 942, 1298, 1317, 1370, 1389, 1960, 2161, 2221, 2401, 2564, 2735, 3094, 3123, 3232, 3318, 3355, 3912, 4303, 5236 |
| CauII | 8 | 1594, 1595, 2422, 2538, 2728, 3682, 4375, 4726 |
| CdiI | 13 | 349, 1057, 1839, 4441, 1753, 1798, 2170, 2295, 2485, 2510, 2590, 4845, 5325 |
| CfrI | 8 | 704, 1186, 1842, 2007, 2260, 2577, 3142, 4581 |
| Cfr10I | 4 | 942, 1975, 2735, 4273 |
| CjeI | 14 | 1543, 2634, 3330, 3885, 5105, 74, 267, 1340, 2067, 2252, 2733, 3806, 3884, 3981 |
| CjePI | 11 | 2634, 3836, 5105, 266, 2251, 2489, 2732, 3980, 4100, 4572, 5137 |
| CspCI | 1 | 388 |
| CstMI | 2 | 904, 4546 |
| CviJI | 96 | 41, 83, 92, 276, 565, 649, 705, 762, 770, 792, 798, 945, 959, 973, 1054, 1187, 1196, 1216, 1289, 1361, 1484, 1513, 1519, 1536, 1559, 1571, 1577, 1590, 1600, 1644, 1716, 1748, 1790, 1843, 1892, 1974, 1987, 2008, 2018, 2036, 2164, 2175, 2188, 2234, 2261, 2343, 2353, 2400, 2418, 2465, 2494, 2536, 2578, 2594, 2711, 2738, 2806, 2939, 2945, 2967, 3019, 3040, 3062, 3126, 3143, 3225, 3244, 3317, 3328, 3346, 3372, 3470, 3560, 3606, 3611, 3636, 3715, 3780, 3791, 3834, 3863, 4223, 4235, 4276, 4302, 4306, 4315, 4381, 4471, 4481, 4544, 4582, 5188, 5250, 5266, 5334 |
| CviRI | 27 | 1311, 1320, 1383, 1392, 1507, 1583, 1713, 1837, 1904, 1918, 1935, 1971, 2220, 2404, 2491, 2803, 2871, 3129, 3618, 3911, 4246, 4336, 4529, 4617, 4861, 5149, 5281 |
| DdeI | 12 | 598, 628, 775, 1533, 2015, 3578, 3984, 4150, 4690, 5155, 5225, 5296 |
| DpnI | 31 | 585, 618, 661, 679, 1620, 1625, 1681, 1814, 1999, 2012, 2102, 2409, 2529, 2746, 2762, 3870, 3942, 3953, 3961, 4039, 4051, 4156, 4497, 4515, 4561, 4819, 4836, 4872, 5121, 5129, 5137 |
| DraIII | 3 | 1045, 1920, 2213 |
| DrdI | 4 | 1088, 2135, 2516, 3405 |
| DsaI | 6 | 360, 580, 1480, 1989, 2345, 2414 |
| Eam1105I | 1 | 4188 |
| EciI | 9 | 779, 506, 1432, 1453, 1463, 1474, 3375, 3521, 4346 |
| Eco31I | 1 | 4260 |
| Eco57I | 2 | 3830, 4875 |
| Eco57MI | 7 | 2284, 2338, 2771, 3830, 2750, 4278, 4875 |
| EcoRI | 1 | 1880 |
| EcoRII | 12 | 89, 282, 1286, 1341, 1358, 3042, 3330, 3451, 3464, 1594, 3682, 4726 |
| Esp3I | 1 | 1699 |
| FauI | 16 | 85, 111, 278, 588, 900, 1420, 1441, 1911, 1961, 2565, 3095, 846, 1780, 2028, 2757, 3152 |
| FnuDII | 25 | 59, 818, 842, 862, 1238, 1657, 1846, 1981, 2092, 2158, 2224, 2373, 2415, 2575, 2756, 3149, 3151, 3349, 3927, 4257, 4750, 5082, 5235, 5323, 5345 |
| Fnu4HI | 37 | 703, 706, 829, 843, 865, 1520, 1714, 1791, 1844, 1972, 2003, 2006, 2262, 2365, 2413, 2416, 2492, 2576, 2690, 2804, 3127, 3208, 3226, 3229, 3347, 3502, 3645, 3710, 3713, 3916, 4244, 4583, 4610, 4705, 4934, 5176, 5316 |
| FokI | 8 | 752, 1993, 2742, 1438, 2393, 4173, 4354, 4641 |
| GdiII | 7 | 704, 1842, 2007, 2577, 3142, 2260, 4581 |
| GsuI | 5 | 2284, 2338, 2771, 2750, 4278 |
| HaeI | 8 | 1186, 1570, 1986, 3316, 3327, 3779, 2035, 3142 |
| HaeII | 4 | 888, 896, 3177, 3547 |
| HaeIII | 26 | 83, 276, 705, 1054, 1187, 1196, 1513, 1519, 1571, 1843, 1987, 2008, 2036, 2188, 2261, 2343, 2578, 3143, 3317, 3328, 3346, 3780, 4235, 4315, 4582, 5334 |
| HaeIV | 2 | 2095, 4188 |
| HgaI | 10 | 517, 2371, 2516, 2628, 2732, 3405, 3980, 1698, 2150, 4730 |
| HgiAI | 10 | 1917, 2219, 3617, 4775, 4860, 5148, 819, 889, 897, 5083 |
| HgiCI | 5 | 465, 1006, 2211, 3047, 4141 |
| HgiJII | 3 | 761, 797, 972 |
| HhaI | 29 | 819, 832, 841, 863, 889, 897, 1794, 1847, 2091, 2159, 2374, 2501, 2574, 2755, 3085, 3150, 3178, 3211, 3481, 3548, 3648, 3822, 3928, 4321, 4414, 4751, 5083, 5234, 5314 |
| Hin4I | 5 | 1694, 2095, 2228, 4188, 4262 |
| HindII | 4 | 2471, 2929, 5114, 5348 |
| HindIII | 1 | 648 |
| HinfI | 16 | 410, 609, 1095, 1117, 1733, 1855, 2055, 2306, 2681, 2718, 3138, 3203, 3278, 3674, 4188, 5289 |
| HpaII | 21 | 943, 1595, 1859, 1976, 2209, 2396, 2422, 2532, 2538, 2728, 2736, 3021, 3510, 3657, 3683, 3873, 4274, 4308, 4375, 4485, 4727 |
| HphI | 8 | 364, 1035, 4667, 4908, 1653, 4044, 4271, 4893 |
| Hpy99I | 17 | 1659, 2155, 2515, 2627, 2928, 3404, 4195, 4458, 5113, 5116, 941, 1795, 1913, 2412, 2611, 2689, 2734 |
| Hpy178III | 25 | 612, 725, 1542, 1668, 1851, 1858, 2167, 2247, 2337, 2395, 2446, 2531, 2583, 3107, 3536, 3670, 3768, 3866, 3946, 4020, 4279, 5028, 5123, 5133, 5322 |
| Hpy188I | 22 | 774, 988, 1532, 1617, 1622, 1678, 1703, 1721, 2043, 2461, 2526, 2644, 2715, 3415, 3493, 3846, 3977, 4112, 4558, 4569, 4689, 5170 |
| Ksp632I | 2 | 3181, 4982 |
| MaeI | 11 | 726, 802, 894, 1574, 2877, 2937, 2941, 3798, 4048, 4383, 5366 |
| MaeII | 18 | 122, 134, 175, 258, 339, 444, 936, 1046, 1089, 1101, 1632, 1661, 1931, 2664, 4003, 4419, 4792, 5112 |
| MaeIII | 15 | 62, 149, 498, 858, 870, 1928, 2817, 3660, 3723, 3839, 4119, 4450, 4508, 4661, 4849 |
| MboI | 31 | 585, 618, 661, 679, 1620, 1625, 1681, 1814, 1999, 2012, 2102, 2409, 2529, 2746, 2762, 3870, 3942, 3953, 3961, 4039, 4051, 4156, 4497, 4515, 4561, 4819, 4836, 4872, 5121, 5129, 5137 |
| MboII | 14 | 729, 1730, 3801, 3950, 5286, 916, 2331, 2334, 2778, 3182, 4041, 4796, 4874, 4983 |
| McrI | 10 | 704, 1842, 1977, 1998, 2007, 2577, 3216, 3640, 4560, 4709 |
| MfeI | 1 | 5277 |
| MluI | 1 | 5344 |
| MmeI | 6 | 1703, 2237, 3493, 3677, 1091, 5214 |
| MnlI | 33 | 711, 1010, 1524, 1530, 2215, 2749, 2934, 3192, 3475, 4350, 4556, 548, 777, 1511, 1517, 1554, 1557, 1569, 1724, 1761, 1985, 2192, 2291, 2318, 2341, 2389, 2647, 3159, 3418, 3742, 4139, 4220, 5218 |
| MseI | 20 | 7, 652, 837, 1108, 1206, 1223, 1234, 1244, 3074, 3133, 4006, 4058, 4063, 4077, 4130, 4365, 4404, 4769, 5185, 5247 |
| MslI | 4 | 361, 4441, 4600, 4959 |
| MstI | 1 | 4413 |
| MwoI | 39 | 84, 206, 238, 277, 370, 394, 747, 771, 832, 834, 876, 903, 933, 1188, 1312, 1384, 1435, 1514, 1520, 1838, 1905, 1936, 1988, 1997, 2019, 2028, 2150, 2212, 2365, 2392, 2492, 3041, 3085, 3169, 3236, 3350, 3919, 4307, 5307 |
| NaeI | 2 | 942, 2735 |
| NcoI | 3 | 360, 1480, 1989 |
| NdeI | 2 | 233, 2086 |
| NlaIII | 20 | 301, 361, 744, 1318, 1390, 1481, 1990, 2073, 2108, 2767, 2915, 2958, 3304, 4021, 4512, 4522, 4600, 4636, 5029, 5283 |
| NlaIV | 19 | 465, 584, 973, 985, 1006, 1289, 1361, 2211, 2234, 2418, 2534, 3047, 3333, 3372, 4141, 4235, 4276, 4487, 5077 |
| NotI | 1 | 703 |
| NruI | 1 | 5322 |
| NspI | 4 | 743, 1317, 1389, 3303 |
| NspBII | 8 | 791, 1962, 2271, 2414, 3125, 3643, 3888, 4826 |
| PfoI | 1 | 2727 |
| PleI | 6 | 1095, 3674, 410, 1117, 3203, 4188 |
| PmaCI | 2 | 1631, 2663 |
| PpiI | 4 | 3991, 1095, 2291, 4834 |
| PshAI | 1 | 1660 |
| PsiI | 2 | 1173, 2809 |
| PstI | 1 | 1970 |
| PvuI | 2 | 1998, 4560 |
| PvuII | 2 | 791, 3125 |
| RsaI | 13 | 218, 243, 298, 331, 382, 539, 602, 625, 2553, 2606, 4672, 5159, 5329 |
| RsrII | 1 | 2044 |
| SacII | 1 | 2414 |
| SalI | 2 | 2929, 5114 |
| SapI | 1 | 3180 |
| ScaI | 4 | 601, 624, 2605, 4671 |
| ScrFI | 17 | 89, 282, 1286, 1341, 1358, 1594, 1595, 2422, 2538, 2728, 3042, 3330, 3451, 3464, 3682, 4375, 4726 |
| SduI | 9 | 761, 797, 972, 1917, 2219, 3617, 4775, 4860, 5148 |
| SecI | 15 | 360, 580, 1285, 1357, 1480, 1515, 1573, 1594, 1989, 2190, 2345, 2414, 2645, 3042, 3463 |
| SexAI | 2 | 1340, 3681 |
| SfaNI | 18 | 1321, 1393, 1838, 1905, 2392, 2835, 3391, 4440, 4880, 367, 753, 1711, 1994, 2179, 2489, 2511, 4650, 5173 |
| SfeI | 5 | 824, 1970, 3568, 3759, 4434 |
| SfiI | 1 | 1187 |
| SgfI | 1 | 1997 |
| SimI | 7 | 26, 2506, 3974, 107, 1014, 3496, 4262 |
| SmaI | 1 | 1594 |
| SmlI | 4 | 3409, 3671, 3945, 4813 |
| SnaBI | 1 | 338 |
| SpeI | 1 | 5365 |
| SphI | 3 | 743, 1317, 1389 |
| SspI | 1 | 4995 |
| Sth132I | 47 | 85, 111, 278, 588, 900, 952, 1420, 1441, 1594, 1852, 1911, 1961, 2201, 2565, 3095, 3430, 3629, 3638, 3682, 4193, 4726, 5094, 5134, 24, 416, 479, 847, 969, 1596, 1781, 2029, 2302, 2423, 2539, 2548, 2729, 2758, 3108, 3153, 3537, 3972, 4217, 4376, 4739, 4800, 5124, 5332 |
| StuI | 1 | 1570 |
| StyI | 6 | 360, 1480, 1573, 1989, 1285, 1357 |
| TaqI | 17 | 607, 620, 713, 1012, 1668, 1683, 1692, 1752, 2169, 2382, 2484, 2509, 2679, 2930, 3403, 4844, 5115 |
| TatI | 10 | 217, 297, 330, 381, 601, 624, 2605, 4671, 5158, 2552 |
| TauI | 19 | 703, 706, 829, 843, 1520, 1844, 2006, 2262, 2413, 2416, 2576, 2690, 3229, 3347, 3502, 4583, 4705, 4934, 5176 |
| TfiI | 14 | 609, 1733, 1855, 2055, 2306, 2681, 2718, 3138, 3278, 5289, 410, 1117, 3203, 4188 |
| TseI | 29 | 865, 1714, 1791, 1972, 2003, 2365, 2492, 2804, 3127, 3208, 3226, 3645, 3710, 3713, 3916, 4244, 4610, 5316, 706, 1520, 1844, 2262, 2413, 2690, 3347, 3502, 4583, 4934, 5176 |
| Tsp45I | 4 | 870, 1928, 4450, 4661 |
| Tsp4CI | 16 | 74, 196, 267, 541, 579, 716, 1071, 2126, 2141, 2543, 2926, 3265, 3336, 3806, 4116, 4631 |
| TspDTI | 9 | 1637, 2700, 3136, 4069, 5284, 672, 2084, 4171, 4474 |
| TspEI | 18 | 19, 1231, 1242, 1246, 1328, 1400, 1492, 1881, 2480, 2843, 2984, 3001, 3076, 4061, 4367, 4622, 5244, 5278 |
| TspGWI | 5 | 2252, 4960, 5118, 2153, 4643 |
| TspRI | 24 | 2117, 2146, 2868, 3090, 3199, 3705, 3718, 3986, 4135, 4240, 4587, 4614, 2115, 2144, 2866, 3088, 3197, 3703, 3716, 3984, 4133, 4238, 4585, 4612 |
| Tth111I | 2 | 1694, 2138 |
| Tth111II | 5 | 3877, 3913, 1866, 3907, 5205 |
| VspI | 5 | 6, 1243, 3073, 3132, 4364 |
| XbaI | 1 | 725 |
| XhoII | 12 | 584, 660, 678, 1619, 2761, 3941, 3952, 4038, 4050, 4818, 4835, 5128 |
| XmaIII | 4 | 704, 1842, 2007, 2577 |
| XmnI | 2 | 1241, 4788 |
