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Standard Vector: pUC57
pUC57 is the GenScript standard vector for synthetic genes.
Plasmid pUC57, 2710 bp in length, is a derivative of pUC19. pUC57 MCS contains 6 restriction sites with protruding 3'-ends, which are resistant to E.coli exonuclease III. This vector is designed for cloning and generation of ExoIII deletions. The exact position of genetic elements is shown on the map (termination codons included). DNA replication initiates at position 890 and proceeds in indicated direction. The bla gene nucleotides 2510-2442 (compl. strand) code for a single peptide.
Multiple Cloning Sites:
Additional Information:
CAP protein binding site 615-578 (compl. strand);
mRNA (LacZ) starts at nt position 531 (compl. strand);
lac repressor binding site 531-511 (compl. strand).
Vector Primers:
Enzymes which cut pUC57 DNA once:
AacI 434, AatII 2645, Acc65I 408, AccEBI 435, AccI 449, AcrI 438, AcsI 396, Acs1371I 447, AflIV 2200, AflIII 830, AhdI 1723, AinI 452, AlwNI 1246, AmaI 413, ApaBI 186, ApaI 446, ApoI 396, AquI 439, Asp52I 470, Asp5HI 464, Asp78I 458, AvaIII 419, AvaI 439, BamHI 435, BbeAI 234, BbeI 239, BbrI 471, BcgI 2228, BcgI' 2262, Bco35I 1807, BfrBI 422, Bli49I 1789, BnaI 435, BpmI 1793, BsaI 1784, BsaMI 424, BsaXI 705, BsaXI' 675, BsbI 117, BseYI 1134, BshLI 428, BsmBI 45, BsmI 424, BspJ106I 407, BspLU11I 830, BsrFI 1803, BstAPI 185, Cfr10I 1803, Cfr9I 439, CfrJ4I 441, ChuII 447, DsaVI 447, EciEI 441, Ecl137I 401, EclHKI 1723, EcoVIII 471, Eco31I 1784, Eco82I 395, Eco88I 439, EcoDR2 397, EcoICRI 404, EcoKI 2380, EcoO109I 2699, EcoRI 396, EcoRV 431, EcoprrI 478, EheI 237, Esp3I 45, FblI 449, HalI 396, HinJCI 450, HincII 450, HindIII 471, KasI 235, KpnI 412, NarI 236, NdeI 184, Nli387/7I 443, NruI 416, NsiI 424, PciI 830, Pfl1108I 1738, PpeI 446, Ppu10I 420, Ppu1253I 2640, PspAI 439, PspOMI 442, PssI 2702, PstI 457, Rrh4273I 447, SacI 406, SalI 448, SapI 714, ScaI 2203, SfoI 237, SmaI 441, SphI 469, SsoI 396, SspI 2527, SstI 406, StuI 461, StySJ 158, StySPI 2380, SynII 2317, Tth111II 1427, Uba1220I 438, Uba1326I 2697, Uba1382I 417, XbaI 425, XmaI 439, XmnI 2322, ZraI 2643.
There are no restriction sites in pUC57 DNA for the following enzymes:AarI, AbeI, AcaI, AccIII, AceII, AdeI, Afa24RI, AfeI, AflII, AgeI, AhyAI, AleI, AloI, AloI', AosIII, ApeI, Apu16I, AscI, AsiSI, AteI, AtuCI, AvrII, BaeI, BaeI', BalI, Bbf7411I, BbsI, BbvCI, BcefI, BclI, Bco102II, Bco63I, BcuI, BglII, BlpI, BmeTI, BmgBI, BmtI, BoxI, BplI, BplI', Bpu10I, Bpu1268I, BsaAI, BsaBI, BsaFI, BsaKI, BscEI, BscJI, Bse59I, BseRI, BsgI, BsiWI, BsmFI, BsmGI, BsoDI, Bsp19I, Bsp87I, BspDI, BspEI, BspGI, BspLU11III, BspMI, BsrBRI, BsrGI, BssHII, Bst1107I, Bst224I, Bst29I, Bst98I, BstBI, BstEII, BstHPI, BstXI, BstZ17I, Bsu36I, BsuMI, BtgI, BtrI, CciNI, CfrAI, ClaI, CspI, Csp45I, DraIII, DrdII, DsaI, EagI, EcaI, EciAI, Eco47III, Eco52I, Eco72I, EcoAI, EcoBI, EcoDI, EcoDXXI, EcoDR3, EcoEI, EcoNI, EcoR124I, EcoR124II, EcoRD3, FalI, FalI', FinI, FseI, FspAI, FsuI, HpaI, M.Mxa879I, MfeI, Mlu1106I, Mlu113I, MluI, MscI, Msp20I, MunI, NaeI, NcoI, NcrI, NgoMIV, NheI, NotI, PacI, PauI, PflMI, PfuI, PinAI, PmeI, PmlI, Ppu6I, PpuMI, PshAI, PsiI, PsrI, PsrI', RleAI, RsrII, SacII, SanDI, SauLPI, SbfI, SciI, SdiI, SexAI, SfiI, SgfI, SgrAI, SmaAI, SnaI, SnaBI, SpeI, SrfI, Sse232I, Sse8387I, Sse8647I, StyI, StySKI, StySQ, SwaI, TaqII', Tth111I, Uba1221I, Van91I, XcmI, XhoI, XmaIII.
Sequence:
LOCUS PUC57CS 2710 bp DNA SYN 11-FEB-1999
DEFINITION Cloning vector pUC57, complete sequence.
ACCESSION Y14837
NID g2440162
VERSION Y14837.1 GI:2440162
KEYWORDS beta-galactosidase; beta-lactamase; bla gene; lac repressor; lacI
gene; lacZ gene.
SOURCE Cloning vector pUC57.
ORGANISM Cloning vector pUC57
artificial sequence; vectors.
REFERENCE 1 (bases 1 to 2710)
AUTHORS Markausakas,A. and Dreguniene,G.
TITLE A new cloning vector pUC57
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 2710)
AUTHORS Markauskas,A.
TITLE Direct Submission
JOURNAL Submitted (16-SEP-1997) A. Markauskas, Fermentas AB, Graiciuno 8,
Vilnius 2028, LITHUANIA
FEATURES Location/Qualifiers
source 1..2710
/organism="Cloning vector pUC57"
/db_xref="taxon:66198"
/lab_host="E.coli"
gene complement(146..493)
/gene="lacZ"
CDS complement(146..493)
/gene="lacZ"
/note="N-terminal fragment"
/codon_start=1
/transl_table=11
/product="beta-galactosidase"
/protein_id="CAA75110.1"
/db_xref="PID:e350489"
/db_xref="PID:g2440163"
/db_xref="GI:2440163"
/db_xref="SPTREMBL:O35991"
/translation="MTMITPSLHAGLCSRRARDPISRCIREVPSSNSLAVVLQRRDWE
NPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRLMRYFLLTHLCGISHR
IWCTLSTICSDAA"
protein_bind complement(511..531)
/note="lac repressor"
/bound_moiety="lacI"
protein_bind complement(578..615)
/bound_moiety="CAP"
misc_feature 876..1490
/note="replicon of pMB1"
rep_origin complement(890)
gene complement(1650..2510)
/gene="bla"
CDS complement(1650..2510)
/gene="bla"
/function="confers resistance to ampicilin"
/codon_start=1
/transl_table=11
/product="beta-lactamase"
/protein_id="CAA75111.1"
/db_xref="PID:e1387385"
/db_xref="PID:g4379389"
/db_xref="GI:4379389"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGY
IELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVE
YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRL
DRWEPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPL
LRSALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIA
EIGASLIKHW"
mat_peptide complement(1653..2441)
/gene="bla"
/product="beta-lactamase"
sig_peptide complement(2442..2510)
/gene="bla"
BASE COUNT 672 a 683 c 691 g 664 t
ORIGIN
1 tcgcgcgttt cggtgatgac ggtgaaaacc tctgacacat gcagctcccg gagacggtca
61 cagcttgtct gtaagcggat gccgggagca gacaagcccg tcagggcgcg tcagcgggtg
121 ttggcgggtg tcggggctgg cttaactatg cggcatcaga gcagattgta ctgagagtgc
181 accatatgcg gtgtgaaata ccgcacagat gcgtaaggag aaaataccgc atcaggcgcc
241 attcgccatt caggctgcgc aactgttggg aagggcgatc ggtgcgggcc tcttcgctat
301 tacgccagct ggcgaaaggg ggatgtgctg caaggcgatt aagttgggta acgccagggt
361 tttcccagtc acgacgttgt aaaacgacgg ccagtgaatt cgagctcggt acctcgcgaa
421 tgcatctaga tatcggatcc cgggcccgtc gactgcagag gcctgcatgc aagcttggcg
481 taatcatggt catagctgtt tcctgtgtga aattgttatc cgctcacaat tccacacaac
541 atacgagccg gaagcataaa gtgtaaagcc tggggtgcct aatgagtgag ctaactcaca
601 ttaattgcgt tgcgctcact gcccgctttc cagtcgggaa acctgtcgtg ccagctgcat
661 taatgaatcg gccaacgcgc ggggagaggc ggtttgcgta ttgggcgctc ttccgcttcc
721 tcgctcactg actcgctgcg ctcggtcgtt cggctgcggc gagcggtatc agctcactca
781 aaggcggtaa tacggttatc cacagaatca ggggataacg caggaaagaa catgtgagca
841 aaaggccagc aaaaggccag gaaccgtaaa aaggccgcgt tgctggcgtt tttccatagg
901 ctccgccccc ctgacgagca tcacaaaaat cgacgctcaa gtcagaggtg gcgaaacccg
961 acaggactat aaagatacca ggcgtttccc cctggaagct ccctcgtgcg ctctcctgtt
1021 ccgaccctgc cgcttaccgg atacctgtcc gcctttctcc cttcgggaag cgtggcgctt
1081 tctcatagct cacgctgtag gtatctcagt tcggtgtagg tcgttcgctc caagctgggc
1141 tgtgtgcacg aaccccccgt tcagcccgac cgctgcgcct tatccggtaa ctatcgtctt
1201 gagtccaacc cggtaagaca cgacttatcg ccactggcag cagccactgg taacaggatt
1261 agcagagcga ggtatgtagg cggtgctaca gagttcttga agtggtggcc taactacggc
1321 tacactagaa gaacagtatt tggtatctgc gctctgctga agccagttac cttcggaaaa
1381 agagttggta gctcttgatc cggcaaacaa accaccgctg gtagcggtgg tttttttgtt
1441 tgcaagcagc agattacgcg cagaaaaaaa ggatctcaag aagatccttt gatcttttct
1501 acggggtctg acgctcagtg gaacgaaaac tcacgttaag ggattttggt catgagatta
1561 tcaaaaagga tcttcaccta gatcctttta aattaaaaat gaagttttaa atcaatctaa
1621 agtatatatg agtaaacttg gtctgacagt taccaatgct taatcagtga ggcacctatc
1681 tcagcgatct gtctatttcg ttcatccata gttgcctgac tccccgtcgt gtagataact
1741 acgatacggg agggcttacc atctggcccc agtgctgcaa tgataccgcg agacccacgc
1801 tcaccggctc cagatttatc agcaataaac cagccagccg gaagggccga gcgcagaagt
1861 ggtcctgcaa ctttatccgc ctccatccag tctattaatt gttgccggga agctagagta
1921 agtagttcgc cagttaatag tttgcgcaac gttgttgcca ttgctacagg catcgtggtg
1981 tcacgctcgt cgtttggtat ggcttcattc agctccggtt cccaacgatc aaggcgagtt
2041 acatgatccc ccatgttgtg caaaaaagcg gttagctcct tcggtcctcc gatcgttgtc
2101 agaagtaagt tggccgcagt gttatcactc atggttatgg cagcactgca taattctctt
2161 actgtcatgc catccgtaag atgcttttct gtgactggtg agtactcaac caagtcattc
2221 tgagaatagt gtatgcggcg accgagttgc tcttgcccgg cgtcaatacg ggataatacc
2281 gcgccacata gcagaacttt aaaagtgctc atcattggaa aacgttcttc ggggcgaaaa
2341 ctctcaagga tcttaccgct gttgagatcc agttcgatgt aacccactcg tgcacccaac
2401 tgatcttcag catcttttac tttcaccagc gtttctgggt gagcaaaaac aggaaggcaa
2461 aatgccgcaa aaaagggaat aagggcgaca cggaaatgtt gaatactcat actcttcctt
2521 tttcaatatt attgaagcat ttatcagggt tattgtctca tgagcggata catatttgaa
2581 tgtatttaga aaaataaaca aataggggtt ccgcgcacat ttccccgaaa agtgccacct
2641 gacgtctaag aaaccattat tatcatgaca ttaacctata aaaataggcg tatcacgagg
2701 ccctttcgtc
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