LINJ_01_0280 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_01_0280
Entrez Gene ID	5066143
Full Name	pseudouridylate synthase-like protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001462604.1	XP_001462641.1	pseudouridylate synthase-like protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_01_0280 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_01_0280 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc00168	XM_001462604.1 Latest version!	Leishmania infantum JPCM5 pseudouridylate synthase-like protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_01_0280 ( XM_001462604.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001462641.1 Leishmania infantum JPCM5 pseudouridylate synthase-like protein partial mRNA.

Price & Availability↑

CloneID	OLc00168
Clone ID Related Accession (Same CDS sequence)	XM_001462604.1
Accession Version	XM_001462604.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1242bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-07-15
Organism	Leishmania infantum JPCM5
Product	pseudouridylate synthase-like protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009386). COMPLETENESS: incomplete on both ends.

ATGCGGCGCC TCTTCCTGCT GCTGGCATGG CAGCCATCCT TTGTCAAGCA TCTCTCGGAA 
CTGGAGCCGG CGCCGCAGAG AGCGCCCGTA GAGAAGCGAC GTAGACAACA TATCCCGCTC 
TCTCTGCAGG CACGCGAGGA GCTGTCCCGC AAGTCGAATG AGCTGCAGTA CCATGTCGTC 
ACGCAGGACT GGTTCGGCCA GCGCGTGGAT GACTTCGTTA TGCAGCACCA CCCGGAGTGG 
GACTACGAGA CGGTGAAGCG GCTGGTGCAG CAGGGGCACA TCTACCGCTA CCGGAAAAAC 
GGAAAGAAGC GATACACGCG GCTGACGGAT CGTCTGGAGT TCGATGAGCT TGTCGTCGTG 
CCGACAGCGA GCTTCTGGGA ACGCCAGCTG GCGCCGCCGA GCGGGGTGGA GCTGCAGAGC 
TCCTCGACGT CGCAGCAGCA GGAGCGGCGG CAGAAGTTTC ACCTCTCCGC CAAGACGCGC 
GAGATGGCGC AGGAGATGGT GCTCTTCAAG AACGAGCACG TCATCGTGAT CAACAAGCCG 
AGCGGCGTGC CGATCATGCC GACGCACGAC CCTCTTGCCA TGAACATCAC AGACCTCCTT 
CCGGCGTGGC GGTACACTAA TACGCAAAAA CCGGTCATAT GCCACAACCT TGACACCGAG 
ACGAGCGGGT GCGTGGTGCT GGCGCGCAGT GCGAACGCGC ACCGCATGCT GGGCCGCATG 
TTTGTGAAGC GTGTAGTGCC GAACAGCGTG TACTGGGGTT TCGCGGTAGG GAAGCCGCCA 
GTGAATTTCG GCCGCATTCG CATGCACTTC GAGATTCAGA AGGGGCAGGG CGGCGATGTC 
ATTGTTGCTC GCCCCACCCC CACCGCAGAC TCCAAGGTAG GCATCGCCGA GTTCGTTGTG 
AATGCCTCCG CGCTGGAGTT CGGCAGCTTC ATCTCCTTTT ACCCACTGAC GACGCGGCGG 
CATCAGGAGC GCATTATGGC CGCCCACGCG CTGCGAGCCC CGCTCCTTGG CGACGCGAAG 
TATGGTGGCG AGAGCGCCTT CCCGCACTCC CTGTCGCTCT TCTGGGACCC CGCCCGCAAA 
GACGTCCCAC TGCACCTCCA TCACCGCAAG ATTCAGCTCC CCTACAAGAA CGGCGCCGGT 
GAGTTTGTGT GCGTCACGGC GCCGCTGCCG CCGCACATGG AGAAGACGTT CAAGCGGTTG 
GGGTGGCCAG TCGACGCTGA TGACCCACTT ATCCCTGGTT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001462641.1
CDS	1..1242
Translation	MRRLFLLLAWQPSFVKHLSELEPAPQRAPVEKRRRQHIPLSLQAREELSRKSNELQYHVVTQDWFGQRVDDFVMQHHPEWDYETVKRLVQQGHIYRYRKNGKKRYTRLTDRLEFDELVVVPTASFWERQLAPPSGVELQSSSTSQQQERRQKFHLSAKTREMAQEMVLFKNEHVIVINKPSGVPIMPTHDPLAMNITDLLPAWRYTNTQKPVICHNLDTETSGCVVLARSANAHRMLGRMFVKRVVPNSVYWGFAVGKPPVNFGRIRMHFEIQKGQGGDVIVARPTPTADSKVGIAEFVVNASALEFGSFISFYPLTTRRHQERIMAAHALRAPLLGDAKYGGESAFPHSLSLFWDPARKDVPLHLHHRKIQLPYKNGAGEFVCVTAPLPPHMEKTFKRLGWPVDADDPLIPG

Target ORF information:

RefSeq Version	XM_001462604.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 pseudouridylate synthase-like protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001462604.1

ORF Insert Sequence:

ATGCGGCGCC TCTTCCTGCT GCTGGCATGG CAGCCATCCT TTGTCAAGCA TCTCTCGGAA 
CTGGAGCCGG CGCCGCAGAG AGCGCCCGTA GAGAAGCGAC GTAGACAACA TATCCCGCTC 
TCTCTGCAGG CACGCGAGGA GCTGTCCCGC AAGTCGAATG AGCTGCAGTA CCATGTCGTC 
ACGCAGGACT GGTTCGGCCA GCGCGTGGAT GACTTCGTTA TGCAGCACCA CCCGGAGTGG 
GACTACGAGA CGGTGAAGCG GCTGGTGCAG CAGGGGCACA TCTACCGCTA CCGGAAAAAC 
GGAAAGAAGC GATACACGCG GCTGACGGAT CGTCTGGAGT TCGATGAGCT TGTCGTCGTG 
CCGACAGCGA GCTTCTGGGA ACGCCAGCTG GCGCCGCCGA GCGGGGTGGA GCTGCAGAGC 
TCCTCGACGT CGCAGCAGCA GGAGCGGCGG CAGAAGTTTC ACCTCTCCGC CAAGACGCGC 
GAGATGGCGC AGGAGATGGT GCTCTTCAAG AACGAGCACG TCATCGTGAT CAACAAGCCG 
AGCGGCGTGC CGATCATGCC GACGCACGAC CCTCTTGCCA TGAACATCAC AGACCTCCTT 
CCGGCGTGGC GGTACACTAA TACGCAAAAA CCGGTCATAT GCCACAACCT TGACACCGAG 
ACGAGCGGGT GCGTGGTGCT GGCGCGCAGT GCGAACGCGC ACCGCATGCT GGGCCGCATG 
TTTGTGAAGC GTGTAGTGCC GAACAGCGTG TACTGGGGTT TCGCGGTAGG GAAGCCGCCA 
GTGAATTTCG GCCGCATTCG CATGCACTTC GAGATTCAGA AGGGGCAGGG CGGCGATGTC 
ATTGTTGCTC GCCCCACCCC CACCGCAGAC TCCAAGGTAG GCATCGCCGA GTTCGTTGTG 
AATGCCTCCG CGCTGGAGTT CGGCAGCTTC ATCTCCTTTT ACCCACTGAC GACGCGGCGG 
CATCAGGAGC GCATTATGGC CGCCCACGCG CTGCGAGCCC CGCTCCTTGG CGACGCGAAG 
TATGGTGGCG AGAGCGCCTT CCCGCACTCC CTGTCGCTCT TCTGGGACCC CGCCCGCAAA 
GACGTCCCAC TGCACCTCCA TCACCGCAAG ATTCAGCTCC CCTACAAGAA CGGCGCCGGT 
GAGTTTGTGT GCGTCACGGC GCCGCTGCCG CCGCACATGG AGAAGACGTT CAAGCGGTTG 
GGGTGGCCAG TCGACGCTGA TGACCCACTT ATCCCTGGTT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_01_0280 cDNA ORF clone, Leishmania infantum JPCM5

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Target ORF information:

Target ORF information:

ORF Insert Sequence:

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