LINJ_01_0600 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_01_0600
Entrez Gene ID	5066149
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001462636.1	XP_001462673.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_01_0600 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_01_0600 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc00174	XM_001462636.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$510.30 $729.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_01_0600 ( XM_001462636.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001462673.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Price & Availability↑

CloneID	OLc00174
Clone ID Related Accession (Same CDS sequence)	XM_001462636.1
Accession Version	XM_001462636.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2895bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-07-15
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009386). COMPLETENESS: incomplete on both ends.

ATGAGCAGTG CCTCGAAGTC GGCGGGAGCC GCTCTGTCCT GGTCTTCTTC TTCGCCGGCG 
CCGTCTGCTG CTCCCACCGC AGTCGCAGTC CCAACCGGCA CGCCAGCGGA GCCGGCCACC 
GCCACCGCCG CGACGGACAA GGACGGCGCC GAGGCGGAGC CGCGGCGGCG TGGCTGGAAG 
CCCATCAAAG ATGGGCGCTT CCGCATCGCC CTCACCCATC ACCACGCCAG CAGTGACGAT 
GACACCGGAG CGGCGCTATC GTCTTTCACG AACGCCGCCC CGGAGGATCT CAGCGGCGCC 
GCCGCGGCGT CGTCGCTCTG CGAAAAGGTC TGCCGCGCCC TCTCGGACAA CGCACGGTGC 
AATGAATGCC GCCCCGGCGA GCCGCACATC GAGGTCTGTG TTGAAGCATC GCTGGTGAAC 
GCAATCAACA GTGCGTACAC CTCCACAGGA TACCCTTTCG TCGTCACCGC CGGCAGCACA 
CGCGGCGCCG TCTACGGCTC CTTCATCGAC CTCAGCAACC CGTCCCTCAG CTCCCTCGAG 
CTGCCGCCGC CGCAGTCTAT CGTTGTCTCC CCGAGCTACG TTGGCGACGC TGATCGTGCG 
CCGGCGCACG GCCTGACGGA GATGGACACA TTGCTGGCGA TCCGCTGGAG CCGCGGCGAC 
CGCATCATGA AGACTGCCGA GGCGGCCCCC ACCGTCGCCG TCGCCGCCGC CGCGCAGGCG 
AAGCAGACCC CACCCACGAT AGCTGCCGGA GCCGCCGGCA GTCCGTACAC GTCAGTCGTC 
GCACGCACCA TTGCGCACCA CCTCTCTCAG TTTCCGGAGG GCATCCACGC CATCCACTCG 
TCTCCGGCGC TGCGGCAGCT CCTGGTAGAG GGCACGCTGC CGACAACGCT GGCAAGCACG 
CCTTCGGCGC CGGTGAACGC GGCAGCGCAC GCGCCGGCCT CGGCGAGCGG CGGCGCTGGT 
AGCCGCAGCG CTGCGGCAGC AGCGCCATCC ACCACCACCT CCACGGCGCA GGAGTTGTCG 
AACGCAGAGG CGAATGTGCC ACCGCTGCCG ACGCCGCCGC AGAGCAACGC CCCTGTTCAG 
CACACGCTCG TCAGCGCGAG CACCTTCAAC CACATCTCCG TCTACTTCGT TGCCCACCAG 
GACGGGAAGC TGCTCTACAC GGCGCCGATA CAGAGCCTCT CCGCCAGTAT TGCGACGCGC 
AAGGTGACGG CACACCAACT CATTCTGGTA GGGCGGGAGG AAGTGGATGC GCTCGTGGAG 
GACCCCTTCA CACCGTTCCC GACGATGCCT CCACGGCGTA CCCGCATCGC CTTCGCGCAT 
GTTCCGGTTG CCGGCGAAGA GGCCGCCGTC TTCTTCGCCT CGAAGACGTC GCGCTTCGTC 
GGCGCGGATG CCCGCAAGAA GGCCGTTGCC GCCGCCCCGG TCCGCTTCAG CGTCGAGCCT 
CACCTTCTCA TCGGCAACCA GAACGGCGAC ATCTTCTTAT TCAGTCTCCT GCAAGAGCGG 
ATTGTGCAGC ACCTGAACTA CAGCGCCGGC CGACCGAGCG CGAGCGCCTC CATCGCCAGC 
GGCAGCAAGG GGGCGGGCAG CAAGCTGGTC TGCTCCCCCG TCTCGTGCAT CGCAGAGGTG 
CAGAACGGCA TCGAGAAGAA GGTCACGCGC ATGGTCGAGT CCGCCGCCAT GGCGAAGCGC 
AACCGCCGAC GGTCCTTCGG CAGCGACGGC ATCCCGACCG GCTTCAACGC CGTCGCCCAT 
GCCGCGGCAC CGTCGCACTA CTACTACGAC GTTCCCCCGT CCCTCTACGC GGTCGGCTTC 
GACGATGGCC AGATGCTGAT CGTGGGCGTC ACGTGCGAAG GCGGGTGGAT GCTGCGGCAT 
CTCAACAACC ACCACTTCGG AATGCGGCCG ATCCACTCCA TCGCAGTGCG GGTGCCGTCC 
TTCTACGCAC GGCTGTGGAC CAGCTACCTG CCCCCCATCA CCTTCGCGGA CCGCGGCAGC 
AAGTCCGAGG TAGCAGCACT GCCGCCCATC ACGACCCTCA TCACGGTCGA GTCGGCGCTC 
ATTGTGCACG AGGAGGAGCA GCTCGTGGCC GCCATATCGT GTAATGGCGG TTCCATTGCG 
CTGGTGCGGC TGCCCGGGAT GGAGATCATC TCCTCTGTTG CCCCGACCGC CTACAACGCC 
GTCGGCGAGA TTCTGGCGCT GCAGTGGACC GCCACGTCGC CGCGCTACCT GCTGACGCCA 
GACATCCTCG TCGCCTCCGG CGAGGACGAC ACGATGACGG CCTTTCAGCT GCTCACGCAG 
CTCCTCGTGA ACACCAGCGA TTGGAGCCAC CACAATGGCA ACGACAACGT GTCGCGCATG 
TCGTCCACGG AGTCCGTGCC GGCAAACGCC CGGCTGCGCA TCCTCGAGAA GAAGCAGTTC 
CACCGCAGCT GGGTCAGCCG GTTGAACTTG ATGCCGGTGG TCGTGCCCGC CGCGACGGCC 
AACGCAAAGG ACGCTGGCCG GTCGAACAGC GGCGGCATGC CGCAGTACCT CGGCGTGTGC 
CTCGTTGCCT CCTCCTATGA CCACCGCACC TCTTTCTGGC CGTACATGTT CAGTGGGCAG 
CAGCGGAGGG CCGGTGAGGC GGAAGGCCCG GACAGCGCCA ACGCTGCGGC ATCAGCGTGG 
AGCGTTGGTG AGGGTGCCGG CAGTGTGGAG CATGCGGACT CGCTGATGTT GGGCCTCACC 
AGCAACAGCG TCCCCTTCGG CACGATTTCG GTGCCGGATC GGTATGTGCT CGTCGACGGC 
CCGACGACAG CGTACCCGCT GCACCCGGAA CTCGTCATCG ACGCTGCGGC CGCCGGCGCC 
GGCACAAGCT TCTTCCTGAC GACAGTGTGC TGCCGTGGCA AGCTAAAGTT CTGGTCCGTC 
CAGGTGAAGG TCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001462673.1
CDS	1..2895
Translation	MSSASKSAGAALSWSSSSPAPSAAPTAVAVPTGTPAEPATATAATDKDGAEAEPRRRGWKPIKDGRFRIALTHHHASSDDDTGAALSSFTNAAPEDLSGAAAASSLCEKVCRALSDNARCNECRPGEPHIEVCVEASLVNAINSAYTSTGYPFVVTAGSTRGAVYGSFIDLSNPSLSSLELPPPQSIVVSPSYVGDADRAPAHGLTEMDTLLAIRWSRGDRIMKTAEAAPTVAVAAAAQAKQTPPTIAAGAAGSPYTSVVARTIAHHLSQFPEGIHAIHSSPALRQLLVEGTLPTTLASTPSAPVNAAAHAPASASGGAGSRSAAAAAPSTTTSTAQELSNAEANVPPLPTPPQSNAPVQHTLVSASTFNHISVYFVAHQDGKLLYTAPIQSLSASIATRKVTAHQLILVGREEVDALVEDPFTPFPTMPPRRTRIAFAHVPVAGEEAAVFFASKTSRFVGADARKKAVAAAPVRFSVEPHLLIGNQNGDIFLFSLLQERIVQHLNYSAGRPSASASIASGSKGAGSKLVCSPVSCIAEVQNGIEKKVTRMVESAAMAKRNRRRSFGSDGIPTGFNAVAHAAAPSHYYYDVPPSLYAVGFDDGQMLIVGVTCEGGWMLRHLNNHHFGMRPIHSIAVRVPSFYARLWTSYLPPITFADRGSKSEVAALPPITTLITVESALIVHEEEQLVAAISCNGGSIALVRLPGMEIISSVAPTAYNAVGEILALQWTATSPRYLLTPDILVASGEDDTMTAFQLLTQLLVNTSDWSHHNGNDNVSRMSSTESVPANARLRILEKKQFHRSWVSRLNLMPVVVPAATANAKDAGRSNSGGMPQYLGVCLVASSYDHRTSFWPYMFSGQQRRAGEAEGPDSANAAASAWSVGEGAGSVEHADSLMLGLTSNSVPFGTISVPDRYVLVDGPTTAYPLHPELVIDAAAAGAGTSFFLTTVCCRGKLKFWSVQVKV

Target ORF information:

RefSeq Version	XM_001462636.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001462636.1

ORF Insert Sequence:

ATGAGCAGTG CCTCGAAGTC GGCGGGAGCC GCTCTGTCCT GGTCTTCTTC TTCGCCGGCG 
CCGTCTGCTG CTCCCACCGC AGTCGCAGTC CCAACCGGCA CGCCAGCGGA GCCGGCCACC 
GCCACCGCCG CGACGGACAA GGACGGCGCC GAGGCGGAGC CGCGGCGGCG TGGCTGGAAG 
CCCATCAAAG ATGGGCGCTT CCGCATCGCC CTCACCCATC ACCACGCCAG CAGTGACGAT 
GACACCGGAG CGGCGCTATC GTCTTTCACG AACGCCGCCC CGGAGGATCT CAGCGGCGCC 
GCCGCGGCGT CGTCGCTCTG CGAAAAGGTC TGCCGCGCCC TCTCGGACAA CGCACGGTGC 
AATGAATGCC GCCCCGGCGA GCCGCACATC GAGGTCTGTG TTGAAGCATC GCTGGTGAAC 
GCAATCAACA GTGCGTACAC CTCCACAGGA TACCCTTTCG TCGTCACCGC CGGCAGCACA 
CGCGGCGCCG TCTACGGCTC CTTCATCGAC CTCAGCAACC CGTCCCTCAG CTCCCTCGAG 
CTGCCGCCGC CGCAGTCTAT CGTTGTCTCC CCGAGCTACG TTGGCGACGC TGATCGTGCG 
CCGGCGCACG GCCTGACGGA GATGGACACA TTGCTGGCGA TCCGCTGGAG CCGCGGCGAC 
CGCATCATGA AGACTGCCGA GGCGGCCCCC ACCGTCGCCG TCGCCGCCGC CGCGCAGGCG 
AAGCAGACCC CACCCACGAT AGCTGCCGGA GCCGCCGGCA GTCCGTACAC GTCAGTCGTC 
GCACGCACCA TTGCGCACCA CCTCTCTCAG TTTCCGGAGG GCATCCACGC CATCCACTCG 
TCTCCGGCGC TGCGGCAGCT CCTGGTAGAG GGCACGCTGC CGACAACGCT GGCAAGCACG 
CCTTCGGCGC CGGTGAACGC GGCAGCGCAC GCGCCGGCCT CGGCGAGCGG CGGCGCTGGT 
AGCCGCAGCG CTGCGGCAGC AGCGCCATCC ACCACCACCT CCACGGCGCA GGAGTTGTCG 
AACGCAGAGG CGAATGTGCC ACCGCTGCCG ACGCCGCCGC AGAGCAACGC CCCTGTTCAG 
CACACGCTCG TCAGCGCGAG CACCTTCAAC CACATCTCCG TCTACTTCGT TGCCCACCAG 
GACGGGAAGC TGCTCTACAC GGCGCCGATA CAGAGCCTCT CCGCCAGTAT TGCGACGCGC 
AAGGTGACGG CACACCAACT CATTCTGGTA GGGCGGGAGG AAGTGGATGC GCTCGTGGAG 
GACCCCTTCA CACCGTTCCC GACGATGCCT CCACGGCGTA CCCGCATCGC CTTCGCGCAT 
GTTCCGGTTG CCGGCGAAGA GGCCGCCGTC TTCTTCGCCT CGAAGACGTC GCGCTTCGTC 
GGCGCGGATG CCCGCAAGAA GGCCGTTGCC GCCGCCCCGG TCCGCTTCAG CGTCGAGCCT 
CACCTTCTCA TCGGCAACCA GAACGGCGAC ATCTTCTTAT TCAGTCTCCT GCAAGAGCGG 
ATTGTGCAGC ACCTGAACTA CAGCGCCGGC CGACCGAGCG CGAGCGCCTC CATCGCCAGC 
GGCAGCAAGG GGGCGGGCAG CAAGCTGGTC TGCTCCCCCG TCTCGTGCAT CGCAGAGGTG 
CAGAACGGCA TCGAGAAGAA GGTCACGCGC ATGGTCGAGT CCGCCGCCAT GGCGAAGCGC 
AACCGCCGAC GGTCCTTCGG CAGCGACGGC ATCCCGACCG GCTTCAACGC CGTCGCCCAT 
GCCGCGGCAC CGTCGCACTA CTACTACGAC GTTCCCCCGT CCCTCTACGC GGTCGGCTTC 
GACGATGGCC AGATGCTGAT CGTGGGCGTC ACGTGCGAAG GCGGGTGGAT GCTGCGGCAT 
CTCAACAACC ACCACTTCGG AATGCGGCCG ATCCACTCCA TCGCAGTGCG GGTGCCGTCC 
TTCTACGCAC GGCTGTGGAC CAGCTACCTG CCCCCCATCA CCTTCGCGGA CCGCGGCAGC 
AAGTCCGAGG TAGCAGCACT GCCGCCCATC ACGACCCTCA TCACGGTCGA GTCGGCGCTC 
ATTGTGCACG AGGAGGAGCA GCTCGTGGCC GCCATATCGT GTAATGGCGG TTCCATTGCG 
CTGGTGCGGC TGCCCGGGAT GGAGATCATC TCCTCTGTTG CCCCGACCGC CTACAACGCC 
GTCGGCGAGA TTCTGGCGCT GCAGTGGACC GCCACGTCGC CGCGCTACCT GCTGACGCCA 
GACATCCTCG TCGCCTCCGG CGAGGACGAC ACGATGACGG CCTTTCAGCT GCTCACGCAG 
CTCCTCGTGA ACACCAGCGA TTGGAGCCAC CACAATGGCA ACGACAACGT GTCGCGCATG 
TCGTCCACGG AGTCCGTGCC GGCAAACGCC CGGCTGCGCA TCCTCGAGAA GAAGCAGTTC 
CACCGCAGCT GGGTCAGCCG GTTGAACTTG ATGCCGGTGG TCGTGCCCGC CGCGACGGCC 
AACGCAAAGG ACGCTGGCCG GTCGAACAGC GGCGGCATGC CGCAGTACCT CGGCGTGTGC 
CTCGTTGCCT CCTCCTATGA CCACCGCACC TCTTTCTGGC CGTACATGTT CAGTGGGCAG 
CAGCGGAGGG CCGGTGAGGC GGAAGGCCCG GACAGCGCCA ACGCTGCGGC ATCAGCGTGG 
AGCGTTGGTG AGGGTGCCGG CAGTGTGGAG CATGCGGACT CGCTGATGTT GGGCCTCACC 
AGCAACAGCG TCCCCTTCGG CACGATTTCG GTGCCGGATC GGTATGTGCT CGTCGACGGC 
CCGACGACAG CGTACCCGCT GCACCCGGAA CTCGTCATCG ACGCTGCGGC CGCCGGCGCC 
GGCACAAGCT TCTTCCTGAC GACAGTGTGC TGCCGTGGCA AGCTAAAGTT CTGGTCCGTC 
CAGGTGAAGG TCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_01_0600 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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