LINJ_30_3440 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_30_3440
Entrez Gene ID	5071244
Full Name	putative CAS/CSE/importin domain protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001467161.1	XP_001467198.1	putative CAS/CSE/importin domain protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_30_3440 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_30_3440 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc04712	XM_001467161.1 Latest version!	Leishmania infantum JPCM5 putative CAS/CSE/importin domain protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$510.30 $729.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_30_3440 ( XM_001467161.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001467198.1 Leishmania infantum JPCM5 putative CAS/CSE/importin domain protein partial mRNA.

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CloneID	OLc04712
Clone ID Related Accession (Same CDS sequence)	XM_001467161.1
Accession Version	XM_001467161.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2928bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-07-15
Organism	Leishmania infantum JPCM5
Product	putative CAS/CSE/importin domain protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009414). COMPLETENESS: incomplete on both ends.

ATGCAGCCAA TCAACCCAAA TGACCGGAAC ACCCAAGCGC GGTTCGTCGA GATAGCTTGC 
AGGGCAGCCT CGCCGGACCC GACGGTGCGC ACGCCGGCGG AGAGAGAGCT TCTAGCTTAC 
CTGGATGCCG TGGACCAACA AAGCGGGCTG CCGCAGCTAC TGCTGGAGCT CACCCATGGC 
GAGACTCCTC ACGACACCTT CTTCGCCATT AGCTTTAAAA ACATGGTGAA GAAGTGCTGG 
GATCCCTCCA CGTCAGAGCA CTGCATCCAG GAGTGCGATA AGGTCGCTGT GCGCGCCACG 
ATTATCGAGA GCATGCTTCG CTCATCGGGT GCGGTGCAGC GGAACTTGGC TGAAGCAATC 
GCCCTCATCG CCCAGGTTGA TTTCCCCACT GCATGGACCG ACGCTTTGTC CCTGATCGTA 
AAAGTGCTCA CTTCCGGAAA TGATGTTGCC CAACTGCGTG CTGCGCTGTC CACGTCTCAC 
AGTGTGTTGC GGAAGTACCG CCATCAGGGC GAGTTGACAG AGGCGCTTGT GCACGAGCTG 
CGTGCCATCT ATAGCTTGCT GTGCCCCGCG CTGGTTCGCA GCATGGAGTC GCTGCTCTTG 
ACAACGGAGA CGCAGGGTGC CAATGTGACC GAGGTGTACA AAGGCATCAC CGATGCCGTG 
GAATGCCTGC GCGATATTAC CTCACTCGAC CTCGGTGACG AGTTCATCGA GCGCATCGGC 
CCCATCGTAA GCATGTACAA TCAATGCCTC AGCAGGGTAA GCGCGCCGCC AGCCTTGTAT 
GGAGTTCAGG CAAGTGCCAT GATCGACATG AACTCGGCCG TGATAGCGTG CATGACGCAC 
TGGCTAAACT CGTTTGACGA GGACTTTGAG AATTTTGCGC CGCAGTTCAT CGAAGTCGTG 
ATTGGGATGC TGGCGAATCA ACTGAGCAGC GACCCTTCCA TGGACGATTT GGTGGTTTGC 
TCTCTCGAGT TGGTCAGCAG CGCGTGCCGG GGCACCACCC GCTCCCACCT GAACACGAGA 
GAGAAGCTGC AATATATACT GCAGTTCATC CTCCTCCCCA ATCTTGCACT TCGCGAGGAT 
GATCTGGAGA CCTACACGAG TGACCCGGAC GAGTACATTA AAAAGAACAT TGAGGGTTCC 
AACTTTCACA CTCGCCGCCG CGCCGCCGTA GAGCTGGTGC GCTCCCTGCT TCTATATCTT 
CCGGAAGTCG CGCGGCCGCT CCTCGCCGAG GTGACCACTG CACTCCTCCA AACTGCACAC 
GGAGACTGGA GGGCCAAAGA CACTGCCATC TACCTAGCAT TTGTGCTAGT GGTGGATGGG 
CAGCTGGTGA ACACACAGCG CGGTGTGACA GCGCAGCAGC TCAGCGAAAT TATTCCTGTT 
GCTCAGATCC TTGACGGCCA CGTTTTCCCG GAGATCAGGT GTGATTTGTC AGCGCAGAGC 
CCTGGCATCG TCAAGGCGGA CTGCATGCTC GTCGTTGCAG CCTTCCGTCA CCTCATCGCC 
TCCACCGCAT ACGAGTTCCT AGTGCCGGCT CTGACTCGCC ACATCGCGGT TGGGGACGCC 
GTGGTTATGA CATATGCGGC CCACACCCTC AAGTGCTTTC TTTCCATCAC CGAAGCGTCG 
GCCGCCGCTG CCATTGAGGC GGTCTTTGCG GGAAACGCCC TCAGCATTCT GGAAGGCCTC 
TGCGTGCGCA TTCAACAGGC AGAGGCGCCG AATCCGTATC TGATGCAGTA CCTCATGAGT 
GTATGCTTCC GCTTTCCGAA ACTTGTCGCC CCCTTCGTGA CACAGGTGAT GGCTTCTCTC 
CACACGCCGC TGTACAGAGC CGTTCGTAAC CCTTCCAACG CGCTGTACAG TCAGTGCATG 
TTCGAGGTCA TCTCGAAGTG CGTGGCGCTG CAGCCGGGAG CAAGGGGTGA GTTCGAGGGG 
ATGCTGTGGC CCAACTTTGC ACACGTGCTA CGTGAGAACG TTGCTGAGTA CGTGCCATAT 
GTTCTCCAAG TATTTGCCCA ACTCGTGCGC ACGTACCAGT CCAGCGATGC TGCGCAGCGG 
TGGGCCGAAA ACCCTGCTGA GAACTACCAA GCCCTCGTCT GCCCGCTTAC TCAACCGCAG 
ATGTACGAAA TGCGTACACA GATACCTGCT CCAGTGTGCT TGCTCTGCGC GTTTGTCGAG 
GTCTACCCGG GATACATGCA TCGGAACGGG ATGACCAATC CAGCTCTGAA CGTCTTCAAC 
ATATTGGTGC GTCTCAAGAA TTACGATAAC GAGGGCTTGA ACATTCTCAC ATCTATGCTG 
CTTGCGTACC CTGCGGATGT CATGGATATG TACATGGACA CTGTATTCAA GGTTCTGATG 
GATCGATTGC AGAGTTCCCC TACACCGAAG TATGTGCGCA TCCTGATCCT ATTCTTGTCG 
GTTGTGGTGG TGCAGCGCCG GGACGCTGAC TACCTGGTCA ATCGCCTCAA CAACATCGAG 
GGCGGCTTGT TCATGAGGGT TCTCGGCAAC GTATGGCTGC CTCGCATGCA AAAGATCACC 
GGCGATGTGG AGCGAAAGAC ATGCGTGGTG GCGCTGGCCA GGCTTCTTTG CGAGTCCACA 
GCGCTGCAGT CCGACACGGC AGCGTGGGTG ACGAGTGCTT CCAGCTGCCT CAGAATGCTG 
CACGATGGCG TGGAGCCGGA CGACCACATC AGCTTCACGC CCGCTGCGGG CGCGGCGCAG 
AATCCAGAGT CCCTGCTTGG CAGTGCCATC GGATCAGATG AGCTCACCAG CTCGTTCCAC 
CCTCTACGAG AGGCGATGCA AAGGCCGCGT GACGTCTGCA GCCACGTCCC CGACGCCCAA 
GCGTTCTTTC AAGCTGAGTT GTCAAGCTTT CTCAAGGGCC GCGGCGCACA CCTCTCCGCC 
TCACTCAAGC AGTGGCTTGG CCCGCATACT CCTGCTTGGC TTTCGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001467198.1
CDS	1..2928
Translation	MQPINPNDRNTQARFVEIACRAASPDPTVRTPAERELLAYLDAVDQQSGLPQLLLELTHGETPHDTFFAISFKNMVKKCWDPSTSEHCIQECDKVAVRATIIESMLRSSGAVQRNLAEAIALIAQVDFPTAWTDALSLIVKVLTSGNDVAQLRAALSTSHSVLRKYRHQGELTEALVHELRAIYSLLCPALVRSMESLLLTTETQGANVTEVYKGITDAVECLRDITSLDLGDEFIERIGPIVSMYNQCLSRVSAPPALYGVQASAMIDMNSAVIACMTHWLNSFDEDFENFAPQFIEVVIGMLANQLSSDPSMDDLVVCSLELVSSACRGTTRSHLNTREKLQYILQFILLPNLALREDDLETYTSDPDEYIKKNIEGSNFHTRRRAAVELVRSLLLYLPEVARPLLAEVTTALLQTAHGDWRAKDTAIYLAFVLVVDGQLVNTQRGVTAQQLSEIIPVAQILDGHVFPEIRCDLSAQSPGIVKADCMLVVAAFRHLIASTAYEFLVPALTRHIAVGDAVVMTYAAHTLKCFLSITEASAAAAIEAVFAGNALSILEGLCVRIQQAEAPNPYLMQYLMSVCFRFPKLVAPFVTQVMASLHTPLYRAVRNPSNALYSQCMFEVISKCVALQPGARGEFEGMLWPNFAHVLRENVAEYVPYVLQVFAQLVRTYQSSDAAQRWAENPAENYQALVCPLTQPQMYEMRTQIPAPVCLLCAFVEVYPGYMHRNGMTNPALNVFNILVRLKNYDNEGLNILTSMLLAYPADVMDMYMDTVFKVLMDRLQSSPTPKYVRILILFLSVVVVQRRDADYLVNRLNNIEGGLFMRVLGNVWLPRMQKITGDVERKTCVVALARLLCESTALQSDTAAWVTSASSCLRMLHDGVEPDDHISFTPAAGAAQNPESLLGSAIGSDELTSSFHPLREAMQRPRDVCSHVPDAQAFFQAELSSFLKGRGAHLSASLKQWLGPHTPAWLS

Target ORF information:

RefSeq Version	XM_001467161.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 putative CAS/CSE/importin domain protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001467161.1

ORF Insert Sequence:

ATGCAGCCAA TCAACCCAAA TGACCGGAAC ACCCAAGCGC GGTTCGTCGA GATAGCTTGC 
AGGGCAGCCT CGCCGGACCC GACGGTGCGC ACGCCGGCGG AGAGAGAGCT TCTAGCTTAC 
CTGGATGCCG TGGACCAACA AAGCGGGCTG CCGCAGCTAC TGCTGGAGCT CACCCATGGC 
GAGACTCCTC ACGACACCTT CTTCGCCATT AGCTTTAAAA ACATGGTGAA GAAGTGCTGG 
GATCCCTCCA CGTCAGAGCA CTGCATCCAG GAGTGCGATA AGGTCGCTGT GCGCGCCACG 
ATTATCGAGA GCATGCTTCG CTCATCGGGT GCGGTGCAGC GGAACTTGGC TGAAGCAATC 
GCCCTCATCG CCCAGGTTGA TTTCCCCACT GCATGGACCG ACGCTTTGTC CCTGATCGTA 
AAAGTGCTCA CTTCCGGAAA TGATGTTGCC CAACTGCGTG CTGCGCTGTC CACGTCTCAC 
AGTGTGTTGC GGAAGTACCG CCATCAGGGC GAGTTGACAG AGGCGCTTGT GCACGAGCTG 
CGTGCCATCT ATAGCTTGCT GTGCCCCGCG CTGGTTCGCA GCATGGAGTC GCTGCTCTTG 
ACAACGGAGA CGCAGGGTGC CAATGTGACC GAGGTGTACA AAGGCATCAC CGATGCCGTG 
GAATGCCTGC GCGATATTAC CTCACTCGAC CTCGGTGACG AGTTCATCGA GCGCATCGGC 
CCCATCGTAA GCATGTACAA TCAATGCCTC AGCAGGGTAA GCGCGCCGCC AGCCTTGTAT 
GGAGTTCAGG CAAGTGCCAT GATCGACATG AACTCGGCCG TGATAGCGTG CATGACGCAC 
TGGCTAAACT CGTTTGACGA GGACTTTGAG AATTTTGCGC CGCAGTTCAT CGAAGTCGTG 
ATTGGGATGC TGGCGAATCA ACTGAGCAGC GACCCTTCCA TGGACGATTT GGTGGTTTGC 
TCTCTCGAGT TGGTCAGCAG CGCGTGCCGG GGCACCACCC GCTCCCACCT GAACACGAGA 
GAGAAGCTGC AATATATACT GCAGTTCATC CTCCTCCCCA ATCTTGCACT TCGCGAGGAT 
GATCTGGAGA CCTACACGAG TGACCCGGAC GAGTACATTA AAAAGAACAT TGAGGGTTCC 
AACTTTCACA CTCGCCGCCG CGCCGCCGTA GAGCTGGTGC GCTCCCTGCT TCTATATCTT 
CCGGAAGTCG CGCGGCCGCT CCTCGCCGAG GTGACCACTG CACTCCTCCA AACTGCACAC 
GGAGACTGGA GGGCCAAAGA CACTGCCATC TACCTAGCAT TTGTGCTAGT GGTGGATGGG 
CAGCTGGTGA ACACACAGCG CGGTGTGACA GCGCAGCAGC TCAGCGAAAT TATTCCTGTT 
GCTCAGATCC TTGACGGCCA CGTTTTCCCG GAGATCAGGT GTGATTTGTC AGCGCAGAGC 
CCTGGCATCG TCAAGGCGGA CTGCATGCTC GTCGTTGCAG CCTTCCGTCA CCTCATCGCC 
TCCACCGCAT ACGAGTTCCT AGTGCCGGCT CTGACTCGCC ACATCGCGGT TGGGGACGCC 
GTGGTTATGA CATATGCGGC CCACACCCTC AAGTGCTTTC TTTCCATCAC CGAAGCGTCG 
GCCGCCGCTG CCATTGAGGC GGTCTTTGCG GGAAACGCCC TCAGCATTCT GGAAGGCCTC 
TGCGTGCGCA TTCAACAGGC AGAGGCGCCG AATCCGTATC TGATGCAGTA CCTCATGAGT 
GTATGCTTCC GCTTTCCGAA ACTTGTCGCC CCCTTCGTGA CACAGGTGAT GGCTTCTCTC 
CACACGCCGC TGTACAGAGC CGTTCGTAAC CCTTCCAACG CGCTGTACAG TCAGTGCATG 
TTCGAGGTCA TCTCGAAGTG CGTGGCGCTG CAGCCGGGAG CAAGGGGTGA GTTCGAGGGG 
ATGCTGTGGC CCAACTTTGC ACACGTGCTA CGTGAGAACG TTGCTGAGTA CGTGCCATAT 
GTTCTCCAAG TATTTGCCCA ACTCGTGCGC ACGTACCAGT CCAGCGATGC TGCGCAGCGG 
TGGGCCGAAA ACCCTGCTGA GAACTACCAA GCCCTCGTCT GCCCGCTTAC TCAACCGCAG 
ATGTACGAAA TGCGTACACA GATACCTGCT CCAGTGTGCT TGCTCTGCGC GTTTGTCGAG 
GTCTACCCGG GATACATGCA TCGGAACGGG ATGACCAATC CAGCTCTGAA CGTCTTCAAC 
ATATTGGTGC GTCTCAAGAA TTACGATAAC GAGGGCTTGA ACATTCTCAC ATCTATGCTG 
CTTGCGTACC CTGCGGATGT CATGGATATG TACATGGACA CTGTATTCAA GGTTCTGATG 
GATCGATTGC AGAGTTCCCC TACACCGAAG TATGTGCGCA TCCTGATCCT ATTCTTGTCG 
GTTGTGGTGG TGCAGCGCCG GGACGCTGAC TACCTGGTCA ATCGCCTCAA CAACATCGAG 
GGCGGCTTGT TCATGAGGGT TCTCGGCAAC GTATGGCTGC CTCGCATGCA AAAGATCACC 
GGCGATGTGG AGCGAAAGAC ATGCGTGGTG GCGCTGGCCA GGCTTCTTTG CGAGTCCACA 
GCGCTGCAGT CCGACACGGC AGCGTGGGTG ACGAGTGCTT CCAGCTGCCT CAGAATGCTG 
CACGATGGCG TGGAGCCGGA CGACCACATC AGCTTCACGC CCGCTGCGGG CGCGGCGCAG 
AATCCAGAGT CCCTGCTTGG CAGTGCCATC GGATCAGATG AGCTCACCAG CTCGTTCCAC 
CCTCTACGAG AGGCGATGCA AAGGCCGCGT GACGTCTGCA GCCACGTCCC CGACGCCCAA 
GCGTTCTTTC AAGCTGAGTT GTCAAGCTTT CTCAAGGGCC GCGGCGCACA CCTCTCCGCC 
TCACTCAAGC AGTGGCTTGG CCCGCATACT CCTGCTTGGC TTTCGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_30_3440 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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