Gene Symbol | HOGA1 |
Entrez Gene ID | 506001 |
Full Name | 4-hydroxy-2-oxoglutarate aldolase 1 |
Synonyms | C10orf65,DHDPSL,NPL2 |
General protein information |
|
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » HOGA1 cDNA ORF clone
Gene Symbol | HOGA1 |
Entrez Gene ID | 506001 |
Full Name | 4-hydroxy-2-oxoglutarate aldolase 1 |
Synonyms | C10orf65,DHDPSL,NPL2 |
General protein information |
|
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
XM_024985529.1 | XP_024841297.1 | 4-hydroxy-2-oxoglutarate aldolase, mitochondrial isoform X1 |
XM_024985530.1 | XP_024841298.1 | 4-hydroxy-2-oxoglutarate aldolase, mitochondrial isoform X2 |
XM_015460639.1 | XP_015316125.1 | 4-hydroxy-2-oxoglutarate aldolase, mitochondrial isoform X1 |
XM_015460642.1 | XP_015316128.1 | 4-hydroxy-2-oxoglutarate aldolase, mitochondrial isoform X4 |
NM_001075237.1 | NP_001068705.1 | 4-hydroxy-2-oxoglutarate aldolase, mitochondrial precursor |
XM_015460640.1 | XP_015316126.1 | 4-hydroxy-2-oxoglutarate aldolase, mitochondrial isoform X2 |
XM_015460641.1 | XP_015316127.1 | 4-hydroxy-2-oxoglutarate aldolase, mitochondrial isoform X3 |
Homo sapiens (human) | HOGA1 | NP_612422.2 |
Bos taurus (cattle) | HOGA1 | NP_001068705.1 |
Gallus gallus (chicken) | C10ORF65 | XP_001233352.2 |
Magnaporthe oryzae (rice blast fungus) | MGG_07462 | XP_003711366.1 |
Neurospora crassa | NCU09532 | XP_957838.1 |
Pan troglodytes (chimpanzee) | HOGA1 | XP_001164461.1 |
Mus musculus (house mouse) | Hoga1 | NP_080428.1 |
Danio rerio (zebrafish) | hoga1 | NP_998035.1 |
Rattus norvegicus (Norway rat) | Hoga1 | NP_001099825.1 |
Canis lupus familiaris (dog) | HOGA1 | XP_850958.1 |
Xenopus tropicalis (tropical clawed frog) | hoga1 | NP_001263607.1 |
Use of a novel microtitration protocol to obtain diffraction-quality crystals of 4-hydroxy-2-oxoglutarate aldolase from Bos taurus.
Huang A, Baker E, Loomes K
Acta crystallographica. Section F, Structural biology communications70(Pt 11)1546-9(2014 Nov)
Structural and biochemical studies of human 4-hydroxy-2-oxoglutarate aldolase: implications for hydroxyproline metabolism in primary hyperoxaluria.
Riedel TJ, Johnson LC, Knight J, Hantgan RR, Holmes RP, Lowther WT
PloS one6(10)e26021(2011)
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
Characterization of 954 bovine full-CDS cDNA sequences.
Harhay GP, Sonstegard TS, Keele JW, Heaton MP, Clawson ML, Snelling WM, Wiedmann RT, Van Tassell CP, Smith TP
BMC genomics6166(2005 Nov)
Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle.
Smith TP, Grosse WM, Freking BA, Roberts AJ, Stone RT, Casas E, Wray JE, White J, Cho J, Fahrenkrug SC, Bennett GL, Heaton MP, Laegreid WW, Rohrer GA, Chitko-McKown CG, Pertea G, Holt I, Karamycheva S, Liang F, Quackenbush J, Keele JW
Genome research11(4)626-30(2001 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Native HOGA was purified from bovine kidney using a novel microtitration protocol to obtain diffraction-quality crystals.
Title: Use of a novel microtitration protocol to obtain diffraction-quality crystals of 4-hydroxy-2-oxoglutarate aldolase from Bos taurus.
The following HOGA1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the HOGA1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa43868 | |
Clone ID Related Accession (Same CDS sequence) | NM_001075237.1 | |
Accession Version | NM_001075237.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 984bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-24 | |
Organism | Bos taurus(cattle) | |
Product | 4-hydroxy-2-oxoglutarate aldolase, mitochondrial precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BT026547.1. On or before Oct 4, 2006 this sequence version replaced XM_865460.1, XM_582382.2, XM_876262.1. ##Evidence-Data-START## Transcript exon combination :: BT026547.1, BC119998.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145413, SAMN03145414 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## |
1 | ATGCTGGTCC CCCGAGTTTG GTCCTCTGTG AGGCTAGGGC TGAGCAGGGT CTTGTCCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001068705.1 |
CDS | 373..1356 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001075237.1 |
1 | ATGCTGGTCC CCCGAGTTTG GTCCTCTGTG AGGCTAGGGC TGAGCAGGGT CTTGTCCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa230780 | |
Clone ID Related Accession (Same CDS sequence) | XM_024985529.1 | |
Accession Version | XM_024985529.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 984bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | 4-hydroxy-2-oxoglutarate aldolase, mitochondrial isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037353.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTGGTCC CCCGAGTTTG GTCCTCTGTG AGGCTAGGGC TGAGCAGGGT CTTGTCCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024841297.1 |
CDS | 403..1386 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024985529.1 |
1 | ATGCTGGTCC CCCGAGTTTG GTCCTCTGTG AGGCTAGGGC TGAGCAGGGT CTTGTCCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa230781 | |
Clone ID Related Accession (Same CDS sequence) | XM_024985530.1 | |
Accession Version | XM_024985530.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 789bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | 4-hydroxy-2-oxoglutarate aldolase, mitochondrial isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037353.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGATGG GCCAAGGCTT CGTTGTCCAG GGCTCCAATG GCGAGTTCCC CTTCCTGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024841298.1 |
CDS | 208..996 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024985530.1 |
1 | ATGATGATGG GCCAAGGCTT CGTTGTCCAG GGCTCCAATG GCGAGTTCCC CTTCCTGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa88680 | |
Clone ID Related Accession (Same CDS sequence) | XM_015460639.1 | |
Accession Version | XM_015460639.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 900bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | 4-hydroxy-2-oxoglutarate aldolase, mitochondrial isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104582.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTGGTCC CCCGAGTTTG GTCCTCTGTG AGGCTAGGGC TGAGCAGGGT CTTGTCCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015316125.1 |
CDS | 381..1280 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015460639.1 |
1 | ATGCTGGTCC CCCGAGTTTG GTCCTCTGTG AGGCTAGGGC TGAGCAGGGT CTTGTCCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa88681 | |
Clone ID Related Accession (Same CDS sequence) | XM_015460640.1 | |
Accession Version | XM_015460640.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 873bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | 4-hydroxy-2-oxoglutarate aldolase, mitochondrial isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104582.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTGGTCC CCCGAGTTTG GTCCTCTGTG AGGCTAGGGC TGAGCAGGGT CTTGTCCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015316126.1 |
CDS | 377..1249 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015460640.1 |
1 | ATGCTGGTCC CCCGAGTTTG GTCCTCTGTG AGGCTAGGGC TGAGCAGGGT CTTGTCCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa88682 | |
Clone ID Related Accession (Same CDS sequence) | XM_015460641.1 | |
Accession Version | XM_015460641.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 864bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | 4-hydroxy-2-oxoglutarate aldolase, mitochondrial isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104582.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTGGTCC CCCGAGTTTG GTCCTCTGTG AGGCTAGGGC TGAGCAGGGT CTTGTCCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015316127.1 |
CDS | 377..1240 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015460641.1 |
1 | ATGCTGGTCC CCCGAGTTTG GTCCTCTGTG AGGCTAGGGC TGAGCAGGGT CTTGTCCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa88683 | |
Clone ID Related Accession (Same CDS sequence) | XM_015460642.1 | |
Accession Version | XM_015460642.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 789bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | 4-hydroxy-2-oxoglutarate aldolase, mitochondrial isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104582.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGATGG GCCAAGGCTT CGTGGTCCAG GGCTCCAATG GCGAGTTCCC CTTCCTGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015316128.1 |
CDS | 204..992 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015460642.1 |
1 | ATGATGATGG GCCAAGGCTT CGTGGTCCAG GGCTCCAATG GCGAGTTCCC CTTCCTGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Use of a novel microtitration protocol to obtain diffraction-quality crystals of 4-hydroxy-2-oxoglutarate aldolase from Bos taurus. |
Structural and biochemical studies of human 4-hydroxy-2-oxoglutarate aldolase: implications for hydroxyproline metabolism in primary hyperoxaluria. |
A whole-genome assembly of the domestic cow, Bos taurus. |
Characterization of 954 bovine full-CDS cDNA sequences. |
Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. |