Gene Symbol |
GPNMB |
Entrez Gene ID |
509600 |
Full Name |
glycoprotein nmb |
General protein information |
- Preferred Names
glycoprotein nmb
Names
transmembrane glycoprotein NMB glycoprotein (transmembrane) nmb
|
Gene Type |
protein-coding |
Organism |
Bos taurus(cattle) |
mRNA and Protein(s)
mRNA |
Protein |
Name |
NM_001038065.1 |
NP_001033154.1 |
transmembrane glycoprotein NMB precursor |
XM_024990593.1 |
XP_024846361.1 |
transmembrane glycoprotein NMB isoform X1 |
XM_015468556.1 |
XP_015324042.1 |
transmembrane glycoprotein NMB isoform X1 |
XM_015468557.1 |
XP_015324043.1 |
transmembrane glycoprotein NMB isoform X1 |
Bos taurus (cattle) |
GPNMB |
NP_001033154.1 |
Mus musculus (house mouse) |
Gpnmb |
NP_444340.3 |
Gallus gallus (chicken) |
GPNMB |
XP_425991.2 |
Danio rerio (zebrafish) |
gpnmb |
XP_691804.2 |
Rattus norvegicus (Norway rat) |
Gpnmb |
NP_579832.1 |
Canis lupus familiaris (dog) |
GPNMB |
XP_539472.2 |
Homo sapiens (human) |
GPNMB |
NP_001005340.1 |
Pan troglodytes (chimpanzee) |
GPNMB |
XP_001157101.2 |
|
GPNMB |
XP_001099643.2 |
Xenopus tropicalis (tropical clawed frog) |
gpnmb |
NP_001124514.1 |
Related articles in PubMed
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following GPNMB gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the GPNMB cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
OBa39302 |
Clone ID Related Accession (Same CDS sequence) |
NM_001038065.1
|
Accession Version |
NM_001038065.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1668bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-13 |
Organism |
Bos taurus(cattle) |
Product |
transmembrane glycoprotein NMB precursor |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC111183.1. On or before Dec 25, 2005 this sequence version replaced XM_586601.2, XM_872003.1, XM_864073.1.
##Evidence-Data-START##
Transcript exon combination :: BC111183.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN03145412, SAMN03145413 [ECO:0000348]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621
| ATGGAATGTC TCTACTGTTT CCTGGGATTT CTGCTTCTGG CTGCAGGATT GCCACTGGAT GCCGCCAAAC GTTTTCATGA TGTGCTGAGT AACGAAAGAC CTTCTGGTTA TATGCGGGAG CACAACCAAT TAAGTGGATG GTCATCAGAT GAAAATGACT GGAATGAAAA ACTCTATCCA GTGTGGAAGA GGGGAGACTC GAGGTGGAAA AGCTCTTGGA AAGGAGGCCG TGTGCAGGCG GTTCTGACCA GTGATTCCCC CGCACTGGTG GGCTCAACCA TAACATTCGC AGTGAACCTG GTATTCCCCA GATGCCAAAA GGAAGATGCC AGTGGCAACA TAGTTTATGA GAAGAACTGC AGAAATGATA CTGGTGCATC TCCTGACCTG TATGTTTACA ACTGGACAGC AGGGACAGAG GACAGCGACT GGGGAAACGA CACGAGTGAA GGCCATCACA ACGTGTTCCC TGATGGGAAG CCTTTCCCTC GCCCCTGGAA AAAGAATTTT GTCTACGTGT TCCACACACT TGGTCAGTAT TTCCAGAAAT TGGGACAGTG TTCAGTGACA ATTTCCATCA ACACAGCCAA TGTGAGTCTT GGCCCTCAAA TCATGGAAGT AACTGTCTAT AGAAGACACC GACGGGCATA TGTTCCCATC GCAAAAGTGA AAGATGTGTA TGTAGTAACA GATCAGATTC CTGTATTTGT GACTATGTCC CAGAAGAACA ATCGAAATTC ATCTGATGAA ACCTTCCTCA GGGATCTCCC CATTACGTTC AGTGTCCTGA TTCACGATCC CAGCCACTTC CTCAATGAGT CTGCCATTTA CTACAAGTGG AACTTCGGGG ATAATACTGG TCTCTTTGTT TCCAACAATC ACACTTTGAA TCACACCTAT GTGCTCAATG GAACCTTTAG CCTCAACCTC ACTGTGCAAG CTGAAGTGCC TGGACCTTGT CCTTTGCCTT CACCCAGACC TCCAAAAACC ACCCCTCCTT TGGTAACTGC TGGTGACAGT ACCCTGGAGC TGAGGGAGAT TCCTGATGAA AGCTGCCATA TTACCAGATA TGGCTACTTT AAAGCCACCA TCACAATTGT AGAGGGCATT CTAGAGGTTA ACATCATCCA AGTGACAGAT GTCCCGATGC CTAGGCCACA GCCTGACAAC TCCCTGGTGG ATTTCGTCGT GACCTGCCAC GGGAGCATCC CCACAGAGGT CTGCACCATC ATCTCTGACC CCAGCTGCCA GATCACCCAG AACCCAGTCT GCGACCCCGT GGCCATGGAG CTGGGTGACA CGTGCTTGCT GACGGTGAGG AGAGCCTTCA GTGGGTCTGG GACATACTGT ATGAACCTCA CTCTGGGGAA TGATGCAAGT CTGGCCCTCA CGAGCACCCT CGTCTCTATC AACAGCAGAG ACCCAGCTTC CCTTTTAAGA ACGGCAAATG GTATCCTGGT CTCCCTTGGC TGCTTGGCCA TACTCGTCAC TGTGATCGCC TTTTTGATGT ACAAAAAACA CAAGGAATAC AAACCAATAG AAAACAGCCC TGGGATCGTG ATCAGAGGCA AAGGCCTGAA TGTTTTCCTC AATCATGCAA AGACCCTGTT CTTCCCCGGA AACCAGGAAA AAGATCCACT GCTCAAGAAC CAACCAGGAA TTCTTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001033154.1 |
CDS | 237..1904 |
Translation | |
Target ORF information:
RefSeq Version | NM_001038065.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus glycoprotein nmb (GPNMB), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001038065.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621
| ATGGAATGTC TCTACTGTTT CCTGGGATTT CTGCTTCTGG CTGCAGGATT GCCACTGGAT GCCGCCAAAC GTTTTCATGA TGTGCTGAGT AACGAAAGAC CTTCTGGTTA TATGCGGGAG CACAACCAAT TAAGTGGATG GTCATCAGAT GAAAATGACT GGAATGAAAA ACTCTATCCA GTGTGGAAGA GGGGAGACTC GAGGTGGAAA AGCTCTTGGA AAGGAGGCCG TGTGCAGGCG GTTCTGACCA GTGATTCCCC CGCACTGGTG GGCTCAACCA TAACATTCGC AGTGAACCTG GTATTCCCCA GATGCCAAAA GGAAGATGCC AGTGGCAACA TAGTTTATGA GAAGAACTGC AGAAATGATA CTGGTGCATC TCCTGACCTG TATGTTTACA ACTGGACAGC AGGGACAGAG GACAGCGACT GGGGAAACGA CACGAGTGAA GGCCATCACA ACGTGTTCCC TGATGGGAAG CCTTTCCCTC GCCCCTGGAA AAAGAATTTT GTCTACGTGT TCCACACACT TGGTCAGTAT TTCCAGAAAT TGGGACAGTG TTCAGTGACA ATTTCCATCA ACACAGCCAA TGTGAGTCTT GGCCCTCAAA TCATGGAAGT AACTGTCTAT AGAAGACACC GACGGGCATA TGTTCCCATC GCAAAAGTGA AAGATGTGTA TGTAGTAACA GATCAGATTC CTGTATTTGT GACTATGTCC CAGAAGAACA ATCGAAATTC ATCTGATGAA ACCTTCCTCA GGGATCTCCC CATTACGTTC AGTGTCCTGA TTCACGATCC CAGCCACTTC CTCAATGAGT CTGCCATTTA CTACAAGTGG AACTTCGGGG ATAATACTGG TCTCTTTGTT TCCAACAATC ACACTTTGAA TCACACCTAT GTGCTCAATG GAACCTTTAG CCTCAACCTC ACTGTGCAAG CTGAAGTGCC TGGACCTTGT CCTTTGCCTT CACCCAGACC TCCAAAAACC ACCCCTCCTT TGGTAACTGC TGGTGACAGT ACCCTGGAGC TGAGGGAGAT TCCTGATGAA AGCTGCCATA TTACCAGATA TGGCTACTTT AAAGCCACCA TCACAATTGT AGAGGGCATT CTAGAGGTTA ACATCATCCA AGTGACAGAT GTCCCGATGC CTAGGCCACA GCCTGACAAC TCCCTGGTGG ATTTCGTCGT GACCTGCCAC GGGAGCATCC CCACAGAGGT CTGCACCATC ATCTCTGACC CCAGCTGCCA GATCACCCAG AACCCAGTCT GCGACCCCGT GGCCATGGAG CTGGGTGACA CGTGCTTGCT GACGGTGAGG AGAGCCTTCA GTGGGTCTGG GACATACTGT ATGAACCTCA CTCTGGGGAA TGATGCAAGT CTGGCCCTCA CGAGCACCCT CGTCTCTATC AACAGCAGAG ACCCAGCTTC CCTTTTAAGA ACGGCAAATG GTATCCTGGT CTCCCTTGGC TGCTTGGCCA TACTCGTCAC TGTGATCGCC TTTTTGATGT ACAAAAAACA CAAGGAATAC AAACCAATAG AAAACAGCCC TGGGATCGTG ATCAGAGGCA AAGGCCTGAA TGTTTTCCTC AATCATGCAA AGACCCTGTT CTTCCCCGGA AACCAGGAAA AAGATCCACT GCTCAAGAAC CAACCAGGAA TTCTTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa233619 |
Clone ID Related Accession (Same CDS sequence) |
XM_024990593.1
|
Accession Version |
XM_024990593.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1368bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
transmembrane glycoprotein NMB isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037331.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321
| ATGGAATGTC TCTACTGTTT CCTGGGATTT CTGCTTCTGG CTGCAGGATT GCCACTGGAT GCTGCCAAAC GTTTTCATGA TGTGCTGAGT AACGAAAGAC CTTCTGGTTA TATGCGGGAG CACAACCAAT TAAGTGGATG GTCATCAGAT GAAAATGACT GGAATGAAAA ACTCTATCCA GTGTGGAAGA GGGGAGACTC GAGGTGGAAA AGCTCTTGGA AAGGAGGCCG TGTGCAGGCG GTTCTGACCA GTGATTCCCC CGCACTGGTG GGCTCAACCA TAACATTCGC AGTGAACCTG GTATTCCCCA GATGCCAAAA GGAAGATGCC AGTGGCAACA TAGTTTATGA GAAGAACTGC AGAAATGATA CTGGTGCATC TCCTGACCTG TATGTTTACA ACTGGACAGC AGGGACAGAG GACAGCGACT GGGGAAACGA CACGAGTGAA GGCCATCACA ACGTGTTCCC TGATGGGAAG CCTTTCCCTC GCCCCTGGAA AAAGAATTTT GTCTACGTGT TCCACACACT TGGTCAGTAT TTCCAGAAAT TGGGACAGTG TTCAGTGACA ATTTCCATCA ACACAGCCAA TGTGAGTCTT GGCCCTCAAA TCATGGAAGT AACTGTCTAT AGAAGACACC GACGGGCATA TGTTCCCATC GCAAAAGTGA AAGATGTGTA TGTAGTAACA GATCAGATTC CTGTATTTGT GACTATGTCC CAGAAGAACA ATCGAAATTC ATCTGATGAA AGCTGCCATA TTACCAGATA TGGCTACTTT AAAGCCACCA TCACAATTGT AGAGGGCATT CTAGAGGTTA ACATCATCCA AGTGACAGAT GTCCCGATGC CTAGGCCACA GCCTGACAAC TCCCTGGTGG ATTTCGTCGT GACCTGCCAC GGGAGCATCC CCACAGAGGT CTGCACCATC ATCTCTGACC CCAGCTGCCA GATCACCCAG AACCCAGTCT GCGACCCCGT GGCCATGGAG CTGGGTGACA CGTGCTTGCT GACGGTGAGG AGAGCCTTCA GTGGGTCTGG GACATACTGT ATGAACCTCA CTCTGGGGAA TGATGCAAGT CTGGCCCTCA CGAGCACCCT CGTCTCTATC AACAGCAGAG ACCCAGCTTC CCTTTTAAGA ACGGCAAATG GTATCCTGGT CTCCCTTGGC TGCTTGGCCA TACTCGTCAC TGTGATCGCC TTTTTGATGT ACAAAAAACA CAAGGAATAC AAACCAATAG AAAACAGCCC TGGGATCGTG ATCAGAGGCA AAGGCCTGAA TGTTTTCCTC AATCATGCAA AGACCCTGTT CTTCCCCGGA AACCAGGAAA AAGATCCACT GCTCAAGAAC CAACCAGGAA TTCTTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_024846361.1 |
CDS | 232..1599 |
Translation | |
Target ORF information:
RefSeq Version | XM_024990593.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus glycoprotein nmb (GPNMB), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_024990593.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321
| ATGGAATGTC TCTACTGTTT CCTGGGATTT CTGCTTCTGG CTGCAGGATT GCCACTGGAT GCTGCCAAAC GTTTTCATGA TGTGCTGAGT AACGAAAGAC CTTCTGGTTA TATGCGGGAG CACAACCAAT TAAGTGGATG GTCATCAGAT GAAAATGACT GGAATGAAAA ACTCTATCCA GTGTGGAAGA GGGGAGACTC GAGGTGGAAA AGCTCTTGGA AAGGAGGCCG TGTGCAGGCG GTTCTGACCA GTGATTCCCC CGCACTGGTG GGCTCAACCA TAACATTCGC AGTGAACCTG GTATTCCCCA GATGCCAAAA GGAAGATGCC AGTGGCAACA TAGTTTATGA GAAGAACTGC AGAAATGATA CTGGTGCATC TCCTGACCTG TATGTTTACA ACTGGACAGC AGGGACAGAG GACAGCGACT GGGGAAACGA CACGAGTGAA GGCCATCACA ACGTGTTCCC TGATGGGAAG CCTTTCCCTC GCCCCTGGAA AAAGAATTTT GTCTACGTGT TCCACACACT TGGTCAGTAT TTCCAGAAAT TGGGACAGTG TTCAGTGACA ATTTCCATCA ACACAGCCAA TGTGAGTCTT GGCCCTCAAA TCATGGAAGT AACTGTCTAT AGAAGACACC GACGGGCATA TGTTCCCATC GCAAAAGTGA AAGATGTGTA TGTAGTAACA GATCAGATTC CTGTATTTGT GACTATGTCC CAGAAGAACA ATCGAAATTC ATCTGATGAA AGCTGCCATA TTACCAGATA TGGCTACTTT AAAGCCACCA TCACAATTGT AGAGGGCATT CTAGAGGTTA ACATCATCCA AGTGACAGAT GTCCCGATGC CTAGGCCACA GCCTGACAAC TCCCTGGTGG ATTTCGTCGT GACCTGCCAC GGGAGCATCC CCACAGAGGT CTGCACCATC ATCTCTGACC CCAGCTGCCA GATCACCCAG AACCCAGTCT GCGACCCCGT GGCCATGGAG CTGGGTGACA CGTGCTTGCT GACGGTGAGG AGAGCCTTCA GTGGGTCTGG GACATACTGT ATGAACCTCA CTCTGGGGAA TGATGCAAGT CTGGCCCTCA CGAGCACCCT CGTCTCTATC AACAGCAGAG ACCCAGCTTC CCTTTTAAGA ACGGCAAATG GTATCCTGGT CTCCCTTGGC TGCTTGGCCA TACTCGTCAC TGTGATCGCC TTTTTGATGT ACAAAAAACA CAAGGAATAC AAACCAATAG AAAACAGCCC TGGGATCGTG ATCAGAGGCA AAGGCCTGAA TGTTTTCCTC AATCATGCAA AGACCCTGTT CTTCCCCGGA AACCAGGAAA AAGATCCACT GCTCAAGAAC CAACCAGGAA TTCTTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa90586 |
Clone ID Related Accession (Same CDS sequence) |
XM_015468556.1
, XM_015468557.1
|
Accession Version |
XM_015468556.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1593bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-01-25 |
Organism |
Bos taurus(cattle) |
Product |
transmembrane glycoprotein NMB isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003103889.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Bos taurus Annotation Release 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 6.5
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561
| ATGGAATGTC TCTACTGTTT CCTGGGATTT CTGCTTCTGG CTGCAGGATT GCCACTGGAT GCTGCCAAAC GTTTTCATGA TGTGCTGAGT AACGAAAGAC CTTCTGGTTA TATGCGGGAG CACAACCAAT TAAGTGGATG GTCATCAGAT GAAAATGACT GGAATGAAAA ACTCTATCCA GTGTGGAAGA GGGGAGACTC GAGGTGGAAA AGCTCTTGGA AAGGAGGCCG TGTGCAGGCG GTTCTGACCA GTGATTCCCC CGCACTGGTG GGCTCAACCA TAACATTCGC AGTGAACCTG GTATTCCCCA GATGCCAAAA GGAAGATGCC AGTGGCAACA TAGTTTATGA GAAGAACTGC AGAAATGATA CTGGTGCATC TCCTGACCTG TATGTTTACA ACTGGACAGC ATGGACAGAG GACAGCGACT GGGGAAACGA CACGAGTGAA GGCCATCACA ACGTGTTCCC TGATGGGAAG CCTTTCCCTC GCCCCTGGAA AAAGAATTTT GTCTACGTGT TCCACACACT TGGTCAGTAT TTCCAGAAAT TGGGACAGTG TTCAGTGACA ATTTCCATCA ACACAGCCAA TGTGAGTCTT GGCCCTCAAA TCATGGAAGT AACTGTCTAT AGAAGACACC GACGGGCATA TGTTCCCATC GCAAAAGTGA AAGATGTGTA TGTAGTAACA GATCAGATTC CTGTATTTGT GACTATGTCC CAGAAGAACA ATCGAAATTC ATCTGATGAA ACCTTCCTCA GGGATCTCCC CATTACGTTC AGTGTCCTGA TTCACGATCC CAGCCACTTC CTCAATGAGT CTGCCATTTA CTACAAGTGG AACTTCGGGG ATAATACTGG TCTCTTTGTT TCCAACAATC ACACTTTGAA TCACACCTAT GTGCTCAATG GAACCTTTAG CCTCAACCTC ACTGTGCAAG CTGAAGTGCC TGGACCTTGT CCTTTGCCTT CACCCAGACC TCCAAAAACC ACCCCTCCTT TGGTAACTGC TGGTGACAGT ACCCTGGAGC TGAGGGAGAT TCCTGATGAA AGCTGCCATA TTACCAGATA TGGCTACTTT AAAGCCACCA TCACAATTGT AGAGGGCATT CTAGAGGTTA ACATCATCCA AGTGACAGAT GTCCCGATGC CTAGGCCACA GCCTGACAAC TCCCTGGTGG ATTTCGTCGT GACCTGCCAC GGGAGCATCC CCACAGAGGT CTGCACCATC ATCTCTGACC CCAGCTGCCA GATCACCCAG AACCCAGTCT GCGACCCCGT GGCCATGGAG CTGGGTGACA CGTGCTTGCT GACGGTGAGG AGAGCCTTCA GTGGGTCTGG GACATACTGT ATGAACCTCA CTCTGGGGAA TGATGCAAGT CTGGCCCTCA CGAGCACCCT CGTCTCTATC AACAGCAGAG ACCCAGCTTC CCTTTTAAGA ACGGCAAATG GTATCCTGGT CTCCCTTGGC TGCTTGGCCA TACTCGTCAC TGTGATCGCC TTTTTGATGT ACAAGAGGAC TCTGCATCAT CTGAGCCACC AGGGAACTTC ACAGGGCTCC TGCAGGCTGC TCTGGAAGAA TGAATGGACA TGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_015324042.1 |
CDS | 232..1824 |
Translation | |
Target ORF information:
RefSeq Version | XM_015468556.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus glycoprotein (transmembrane) nmb (GPNMB), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_015468556.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561
| ATGGAATGTC TCTACTGTTT CCTGGGATTT CTGCTTCTGG CTGCAGGATT GCCACTGGAT GCTGCCAAAC GTTTTCATGA TGTGCTGAGT AACGAAAGAC CTTCTGGTTA TATGCGGGAG CACAACCAAT TAAGTGGATG GTCATCAGAT GAAAATGACT GGAATGAAAA ACTCTATCCA GTGTGGAAGA GGGGAGACTC GAGGTGGAAA AGCTCTTGGA AAGGAGGCCG TGTGCAGGCG GTTCTGACCA GTGATTCCCC CGCACTGGTG GGCTCAACCA TAACATTCGC AGTGAACCTG GTATTCCCCA GATGCCAAAA GGAAGATGCC AGTGGCAACA TAGTTTATGA GAAGAACTGC AGAAATGATA CTGGTGCATC TCCTGACCTG TATGTTTACA ACTGGACAGC ATGGACAGAG GACAGCGACT GGGGAAACGA CACGAGTGAA GGCCATCACA ACGTGTTCCC TGATGGGAAG CCTTTCCCTC GCCCCTGGAA AAAGAATTTT GTCTACGTGT TCCACACACT TGGTCAGTAT TTCCAGAAAT TGGGACAGTG TTCAGTGACA ATTTCCATCA ACACAGCCAA TGTGAGTCTT GGCCCTCAAA TCATGGAAGT AACTGTCTAT AGAAGACACC GACGGGCATA TGTTCCCATC GCAAAAGTGA AAGATGTGTA TGTAGTAACA GATCAGATTC CTGTATTTGT GACTATGTCC CAGAAGAACA ATCGAAATTC ATCTGATGAA ACCTTCCTCA GGGATCTCCC CATTACGTTC AGTGTCCTGA TTCACGATCC CAGCCACTTC CTCAATGAGT CTGCCATTTA CTACAAGTGG AACTTCGGGG ATAATACTGG TCTCTTTGTT TCCAACAATC ACACTTTGAA TCACACCTAT GTGCTCAATG GAACCTTTAG CCTCAACCTC ACTGTGCAAG CTGAAGTGCC TGGACCTTGT CCTTTGCCTT CACCCAGACC TCCAAAAACC ACCCCTCCTT TGGTAACTGC TGGTGACAGT ACCCTGGAGC TGAGGGAGAT TCCTGATGAA AGCTGCCATA TTACCAGATA TGGCTACTTT AAAGCCACCA TCACAATTGT AGAGGGCATT CTAGAGGTTA ACATCATCCA AGTGACAGAT GTCCCGATGC CTAGGCCACA GCCTGACAAC TCCCTGGTGG ATTTCGTCGT GACCTGCCAC GGGAGCATCC CCACAGAGGT CTGCACCATC ATCTCTGACC CCAGCTGCCA GATCACCCAG AACCCAGTCT GCGACCCCGT GGCCATGGAG CTGGGTGACA CGTGCTTGCT GACGGTGAGG AGAGCCTTCA GTGGGTCTGG GACATACTGT ATGAACCTCA CTCTGGGGAA TGATGCAAGT CTGGCCCTCA CGAGCACCCT CGTCTCTATC AACAGCAGAG ACCCAGCTTC CCTTTTAAGA ACGGCAAATG GTATCCTGGT CTCCCTTGGC TGCTTGGCCA TACTCGTCAC TGTGATCGCC TTTTTGATGT ACAAGAGGAC TCTGCATCAT CTGAGCCACC AGGGAACTTC ACAGGGCTCC TGCAGGCTGC TCTGGAAGAA TGAATGGACA TGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa90586 |
Clone ID Related Accession (Same CDS sequence) |
XM_015468556.1
, XM_015468557.1
|
Accession Version |
XM_015468557.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1593bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-01-25 |
Organism |
Bos taurus(cattle) |
Product |
transmembrane glycoprotein NMB isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003103889.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Bos taurus Annotation Release 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 6.5
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561
| ATGGAATGTC TCTACTGTTT CCTGGGATTT CTGCTTCTGG CTGCAGGATT GCCACTGGAT GCTGCCAAAC GTTTTCATGA TGTGCTGAGT AACGAAAGAC CTTCTGGTTA TATGCGGGAG CACAACCAAT TAAGTGGATG GTCATCAGAT GAAAATGACT GGAATGAAAA ACTCTATCCA GTGTGGAAGA GGGGAGACTC GAGGTGGAAA AGCTCTTGGA AAGGAGGCCG TGTGCAGGCG GTTCTGACCA GTGATTCCCC CGCACTGGTG GGCTCAACCA TAACATTCGC AGTGAACCTG GTATTCCCCA GATGCCAAAA GGAAGATGCC AGTGGCAACA TAGTTTATGA GAAGAACTGC AGAAATGATA CTGGTGCATC TCCTGACCTG TATGTTTACA ACTGGACAGC ATGGACAGAG GACAGCGACT GGGGAAACGA CACGAGTGAA GGCCATCACA ACGTGTTCCC TGATGGGAAG CCTTTCCCTC GCCCCTGGAA AAAGAATTTT GTCTACGTGT TCCACACACT TGGTCAGTAT TTCCAGAAAT TGGGACAGTG TTCAGTGACA ATTTCCATCA ACACAGCCAA TGTGAGTCTT GGCCCTCAAA TCATGGAAGT AACTGTCTAT AGAAGACACC GACGGGCATA TGTTCCCATC GCAAAAGTGA AAGATGTGTA TGTAGTAACA GATCAGATTC CTGTATTTGT GACTATGTCC CAGAAGAACA ATCGAAATTC ATCTGATGAA ACCTTCCTCA GGGATCTCCC CATTACGTTC AGTGTCCTGA TTCACGATCC CAGCCACTTC CTCAATGAGT CTGCCATTTA CTACAAGTGG AACTTCGGGG ATAATACTGG TCTCTTTGTT TCCAACAATC ACACTTTGAA TCACACCTAT GTGCTCAATG GAACCTTTAG CCTCAACCTC ACTGTGCAAG CTGAAGTGCC TGGACCTTGT CCTTTGCCTT CACCCAGACC TCCAAAAACC ACCCCTCCTT TGGTAACTGC TGGTGACAGT ACCCTGGAGC TGAGGGAGAT TCCTGATGAA AGCTGCCATA TTACCAGATA TGGCTACTTT AAAGCCACCA TCACAATTGT AGAGGGCATT CTAGAGGTTA ACATCATCCA AGTGACAGAT GTCCCGATGC CTAGGCCACA GCCTGACAAC TCCCTGGTGG ATTTCGTCGT GACCTGCCAC GGGAGCATCC CCACAGAGGT CTGCACCATC ATCTCTGACC CCAGCTGCCA GATCACCCAG AACCCAGTCT GCGACCCCGT GGCCATGGAG CTGGGTGACA CGTGCTTGCT GACGGTGAGG AGAGCCTTCA GTGGGTCTGG GACATACTGT ATGAACCTCA CTCTGGGGAA TGATGCAAGT CTGGCCCTCA CGAGCACCCT CGTCTCTATC AACAGCAGAG ACCCAGCTTC CCTTTTAAGA ACGGCAAATG GTATCCTGGT CTCCCTTGGC TGCTTGGCCA TACTCGTCAC TGTGATCGCC TTTTTGATGT ACAAGAGGAC TCTGCATCAT CTGAGCCACC AGGGAACTTC ACAGGGCTCC TGCAGGCTGC TCTGGAAGAA TGAATGGACA TGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_015324043.1 |
CDS | 232..1824 |
Translation | |
Target ORF information:
RefSeq Version | XM_015468557.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus glycoprotein (transmembrane) nmb (GPNMB), transcript variant X2, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_015468557.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561
| ATGGAATGTC TCTACTGTTT CCTGGGATTT CTGCTTCTGG CTGCAGGATT GCCACTGGAT GCTGCCAAAC GTTTTCATGA TGTGCTGAGT AACGAAAGAC CTTCTGGTTA TATGCGGGAG CACAACCAAT TAAGTGGATG GTCATCAGAT GAAAATGACT GGAATGAAAA ACTCTATCCA GTGTGGAAGA GGGGAGACTC GAGGTGGAAA AGCTCTTGGA AAGGAGGCCG TGTGCAGGCG GTTCTGACCA GTGATTCCCC CGCACTGGTG GGCTCAACCA TAACATTCGC AGTGAACCTG GTATTCCCCA GATGCCAAAA GGAAGATGCC AGTGGCAACA TAGTTTATGA GAAGAACTGC AGAAATGATA CTGGTGCATC TCCTGACCTG TATGTTTACA ACTGGACAGC ATGGACAGAG GACAGCGACT GGGGAAACGA CACGAGTGAA GGCCATCACA ACGTGTTCCC TGATGGGAAG CCTTTCCCTC GCCCCTGGAA AAAGAATTTT GTCTACGTGT TCCACACACT TGGTCAGTAT TTCCAGAAAT TGGGACAGTG TTCAGTGACA ATTTCCATCA ACACAGCCAA TGTGAGTCTT GGCCCTCAAA TCATGGAAGT AACTGTCTAT AGAAGACACC GACGGGCATA TGTTCCCATC GCAAAAGTGA AAGATGTGTA TGTAGTAACA GATCAGATTC CTGTATTTGT GACTATGTCC CAGAAGAACA ATCGAAATTC ATCTGATGAA ACCTTCCTCA GGGATCTCCC CATTACGTTC AGTGTCCTGA TTCACGATCC CAGCCACTTC CTCAATGAGT CTGCCATTTA CTACAAGTGG AACTTCGGGG ATAATACTGG TCTCTTTGTT TCCAACAATC ACACTTTGAA TCACACCTAT GTGCTCAATG GAACCTTTAG CCTCAACCTC ACTGTGCAAG CTGAAGTGCC TGGACCTTGT CCTTTGCCTT CACCCAGACC TCCAAAAACC ACCCCTCCTT TGGTAACTGC TGGTGACAGT ACCCTGGAGC TGAGGGAGAT TCCTGATGAA AGCTGCCATA TTACCAGATA TGGCTACTTT AAAGCCACCA TCACAATTGT AGAGGGCATT CTAGAGGTTA ACATCATCCA AGTGACAGAT GTCCCGATGC CTAGGCCACA GCCTGACAAC TCCCTGGTGG ATTTCGTCGT GACCTGCCAC GGGAGCATCC CCACAGAGGT CTGCACCATC ATCTCTGACC CCAGCTGCCA GATCACCCAG AACCCAGTCT GCGACCCCGT GGCCATGGAG CTGGGTGACA CGTGCTTGCT GACGGTGAGG AGAGCCTTCA GTGGGTCTGG GACATACTGT ATGAACCTCA CTCTGGGGAA TGATGCAAGT CTGGCCCTCA CGAGCACCCT CGTCTCTATC AACAGCAGAG ACCCAGCTTC CCTTTTAAGA ACGGCAAATG GTATCCTGGT CTCCCTTGGC TGCTTGGCCA TACTCGTCAC TGTGATCGCC TTTTTGATGT ACAAGAGGAC TCTGCATCAT CTGAGCCACC AGGGAACTTC ACAGGGCTCC TGCAGGCTGC TCTGGAAGAA TGAATGGACA TGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
A whole-genome assembly of the domestic cow, Bos taurus.
Genome biology10(4)R42(2009)
Zimin AV,Delcher AL,Florea L,Kelley DR,Schatz MC,Puiu D,Hanrahan F,Pertea G,Van Tassell CP,Sonstegard TS,Mar?ais G,Roberts M,Subramanian P,Yorke JA,Salzberg SL |