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PKP3 cDNA ORF clone, Bos taurus(cattle)

Summary

Gene Symbol PKP3
Entrez Gene ID 516247
Full Name plakophilin 3
General protein information
Preferred Names

plakophilin 3

Names

plakophilin-3
Gene Type protein-coding
Organism Bos taurus(cattle)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_005227345.3 XP_005227402.1 plakophilin-3 isoform X1
XM_005227345.4 XP_005227402.1 plakophilin-3 isoform X1
NM_001076858.1 NP_001070326.1 plakophilin-3

Pathways from BioSystems


Homologies


Bos taurus (cattle) PKP3 NP_001070326.1
Mus musculus (house mouse) Pkp3 NP_062736.2
Danio rerio (zebrafish) LOC100330353 XP_002662884.1
Xenopus tropicalis (tropical clawed frog) pkp3 XP_004913458.1
Danio rerio (zebrafish) pkp3a NP_001038745.1
LOC720779 XP_002808101.1
Canis lupus familiaris (dog) PKP3 XP_005631764.1
Gallus gallus (chicken) PKP3 XP_003641337.1
Homo sapiens (human) PKP3 NP_009114.1
Rattus norvegicus (Norway rat) Pkp3 NP_001099785.1

Gene Ontology


Bibliography

Related articles in PubMed

A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following PKP3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PKP3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OBa42182 NM_001076858.1
Latest version!		 Bos taurus plakophilin 3 (PKP3), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 12-14 $426.30
$609.00
OBa35017 XM_005227345.4
Latest version!		 Bos taurus plakophilin 3 (PKP3), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 12-14 $426.30
$609.00
View Old Accession Versions >>
OBa35017 XM_005227345.3 Bos taurus plakophilin 3 (PKP3), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 12-14 $426.30
$609.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OBa42182
Clone ID Related Accession (Same CDS sequence) NM_001076858.1
Accession Version NM_001076858.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2382bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-10-19
Organism Bos taurus(cattle)
Product plakophilin-3
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC123626.1. On Oct 11, 2006 this sequence version replaced XM_594398.2. ##Evidence-Data-START## Transcript exon combination :: BC123626.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN03145412, SAMN03145413 [ECO:0000350] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
ATGCAGGACG GTAACTTCCT GCTCTCCGCC CTGCAGCCCG AGGCGGGCGT GTGCTCCCTG 
GCGCTGCCCT CGGATCTGCA GCTGGACCGC CGGGGCGCCG AGGGGCCGGA GGCAGAGCGG 
CTGAGGGCGG CCCGCGTCCA GGAGCAGGTC CGCGCGCGCC TGCTGCAGCT GGGCCAGCAG 
CCACGGCACA ATGGGCCCGC TGAGCCCGAC GGGGCAGCCG AGGCGGCCAG AGGTGCATCC 
AGGGCTCAGT ACCACACCTT GCAGGCCGGC TTCAGCTCTC GCTCCCAGGG CCTGGGCGGG 
GAAACCTCGA CCTTCCGGCC CATCGCCAAG CCCACCTACA GCCCCGCCTC CTGGTCTTCC 
CGCTCGGCCG TGGACCTGAG CTCCAGTCGG AGGCTAAGCT CCGTCCACAA CGGGGGTGGT 
GCCTTTGGGG CTGCAGGGTA CCGGGGTGCC CCGCCCACTG CACCAGTGCC CGCCCGGCCT 
GTGTCCTTCC ACGAGCGTGG TGGGGCAGGC AGCCGGGCAG ATTACGACAC CTTGTCCCTG 
CGCTCACTGA GGCTGGGGGC CGGGGGCCCA GACGACCGAT ACAGCGTGGT GTCCGAGCAG 
CTGGAGCCGG CAGCCACGTC CTCCTACAGG GCCTTTGCCT ACGAGCGCCG GGCCAGCTCC 
AGCTCTAGCC GGGCTGGGGG CCTGGACTGG CCGGAGGCTA CCGAGGGACC ACCCAGCCGG 
ACCATCCGTG CCCCTGCCAT GCGGACCCTG CAGCGGTTTC AAAGCAGCCA CCGCAGCCGT 
GGAGTGGCTG CGGGCGGGCC CGGGGGCGTC CTGGAGCCCG TGACCCGCGC ACCATCTGTG 
CGCAGCCTCA GCCTCGGTGA CTCGGGCCAC CTGCCGGACA TGCGCGGGCT GGACAGCTAC 
GGCGGCCACC GCACCCTGCA GAGGCTCAGC AGCGGATTCG ATGACATCGA CCTGCCCTCA 
GCAGTCAAGT ACCTCATGGC CTCAGATCCC AACCTGCAGG TGCTGGGAGC TGCCTACATT 
CAGCACAAGT GTTACAGCGA TGCAGCCGCC AAGAAGCAGG CCCGCAGCCT GCAGGCTGTG 
CCCAGGCTGG TGAAGCTCTT CAACCACGCC AACCAGGAAG TGCAGCGCCA CGCCACAGGC 
GCCATGCGCA ACCTCGTCTA CGACAACGCG GACAACAAGC TGGCCCTGGT GGAGGAGAAC 
GGCATCTTCG AGCTGCTGCG GGCGCTGCGG GAGCAGGACG ACGAGCTCCG CAAGAACGTC 
ACAGGGATCC TGTGGAACCT GTCCTCCAGC GACCACCTGA AGGACCGCCT GGCCCGGGAC 
ACGCTGGAGC AGCTCACAGA TCTGGTGCTG AGCCCCCTGT CGGGGGCGGG CGGGCCACCC 
CTCATCCAGC AGAACGCCTC TGAAGCCGAG ATATTCTACA ACGCCACCGG CTTCCTCAGG 
AACCTCAGCT CCGCCTCCCA GGCCACTCGC CAGAAAATGC GTGAGTGTCA CGGGCTGGTG 
GACGCCCTGG TCACCTACAT CAACCACGCC CTGGACGTGG GCAAGTGTGA GGATAAGAGT 
GTGGAGAACG CCGTGTGCGT GCTGAGGAAC CTGTCCTACC GCCTGTACGA CGAGATGCCG 
CCCTCGGCCC TTCAGCGGCT GGAGGGCCGG GGCCGCCAGG ACATGGGGGT ACCCCCAGGC 
GAGGCGGTGG GCTGCTTCAC TCCACAGAGC CGGCGGCTCC GAGAGCTGCC CCTCACGGCC 
GACGCGCTCA CCTTTGCCGA GGTGTCTAAG GACCCCAAGG GCCTCGAGTG GCTGTGGAGC 
CCCCAGATCG TGGGGCTGTA CAACCGGCTG CTGCAGCGCT GTGAGCTCAA CCGGCACACG 
ACCGAGGCAG CAGCCGGGGC GCTGCAGAAC ATCACCGCAG GGGACCGCAG GTGGGCGGGG 
GTGCTGAGCC GGCTGGCTCT GGAGCAGGAG CGCATACTGA ACCCGCTGCT GGACCGAGTT 
CGGACCGCTG ACCACCACCA GCTGCGCTCA CTGACAGGCC TCATCCGAAA CCTGTCCCGA 
AACGCCAGGA ACAAGGATGA GATGTCCACC AAGCTGGTGA GTCACCTGAT CGAGAAGCTG 
CCCGGCAGCG TGGGTGAGAA GTCTCCTCCA GCCGACGTGC TGATAAACAT CATAGCTGTC 
CTCAACAACC TCGTGGTGGC CAGTCCCGTG GCCGCCCGGG ACCTGCTCTA CTTCGACGGG 
CTCCGCAAGC TGGTCTTCAT CAAGAAGAAG CGGGACAGCC CTGACAGTGA GAAGTCCTCC 
CGGGCGGCCT CTAGCCTCTT GGCCAACCTG TGGCAGTACA ACAAGCTCCA CCGAGACTTC 
CGGGCGAAGG GCTACCGGAA GGAGGACTTC CTGGGGCCGT AG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001070326.1
CDS80..2461
Translation

Target ORF information:

RefSeq Version NM_001076858.1
Organism Bos taurus(cattle)
Definition Bos taurus plakophilin 3 (PKP3), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001076858.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
ATGCAGGACG GTAACTTCCT GCTCTCCGCC CTGCAGCCCG AGGCGGGCGT GTGCTCCCTG 
GCGCTGCCCT CGGATCTGCA GCTGGACCGC CGGGGCGCCG AGGGGCCGGA GGCAGAGCGG 
CTGAGGGCGG CCCGCGTCCA GGAGCAGGTC CGCGCGCGCC TGCTGCAGCT GGGCCAGCAG 
CCACGGCACA ATGGGCCCGC TGAGCCCGAC GGGGCAGCCG AGGCGGCCAG AGGTGCATCC 
AGGGCTCAGT ACCACACCTT GCAGGCCGGC TTCAGCTCTC GCTCCCAGGG CCTGGGCGGG 
GAAACCTCGA CCTTCCGGCC CATCGCCAAG CCCACCTACA GCCCCGCCTC CTGGTCTTCC 
CGCTCGGCCG TGGACCTGAG CTCCAGTCGG AGGCTAAGCT CCGTCCACAA CGGGGGTGGT 
GCCTTTGGGG CTGCAGGGTA CCGGGGTGCC CCGCCCACTG CACCAGTGCC CGCCCGGCCT 
GTGTCCTTCC ACGAGCGTGG TGGGGCAGGC AGCCGGGCAG ATTACGACAC CTTGTCCCTG 
CGCTCACTGA GGCTGGGGGC CGGGGGCCCA GACGACCGAT ACAGCGTGGT GTCCGAGCAG 
CTGGAGCCGG CAGCCACGTC CTCCTACAGG GCCTTTGCCT ACGAGCGCCG GGCCAGCTCC 
AGCTCTAGCC GGGCTGGGGG CCTGGACTGG CCGGAGGCTA CCGAGGGACC ACCCAGCCGG 
ACCATCCGTG CCCCTGCCAT GCGGACCCTG CAGCGGTTTC AAAGCAGCCA CCGCAGCCGT 
GGAGTGGCTG CGGGCGGGCC CGGGGGCGTC CTGGAGCCCG TGACCCGCGC ACCATCTGTG 
CGCAGCCTCA GCCTCGGTGA CTCGGGCCAC CTGCCGGACA TGCGCGGGCT GGACAGCTAC 
GGCGGCCACC GCACCCTGCA GAGGCTCAGC AGCGGATTCG ATGACATCGA CCTGCCCTCA 
GCAGTCAAGT ACCTCATGGC CTCAGATCCC AACCTGCAGG TGCTGGGAGC TGCCTACATT 
CAGCACAAGT GTTACAGCGA TGCAGCCGCC AAGAAGCAGG CCCGCAGCCT GCAGGCTGTG 
CCCAGGCTGG TGAAGCTCTT CAACCACGCC AACCAGGAAG TGCAGCGCCA CGCCACAGGC 
GCCATGCGCA ACCTCGTCTA CGACAACGCG GACAACAAGC TGGCCCTGGT GGAGGAGAAC 
GGCATCTTCG AGCTGCTGCG GGCGCTGCGG GAGCAGGACG ACGAGCTCCG CAAGAACGTC 
ACAGGGATCC TGTGGAACCT GTCCTCCAGC GACCACCTGA AGGACCGCCT GGCCCGGGAC 
ACGCTGGAGC AGCTCACAGA TCTGGTGCTG AGCCCCCTGT CGGGGGCGGG CGGGCCACCC 
CTCATCCAGC AGAACGCCTC TGAAGCCGAG ATATTCTACA ACGCCACCGG CTTCCTCAGG 
AACCTCAGCT CCGCCTCCCA GGCCACTCGC CAGAAAATGC GTGAGTGTCA CGGGCTGGTG 
GACGCCCTGG TCACCTACAT CAACCACGCC CTGGACGTGG GCAAGTGTGA GGATAAGAGT 
GTGGAGAACG CCGTGTGCGT GCTGAGGAAC CTGTCCTACC GCCTGTACGA CGAGATGCCG 
CCCTCGGCCC TTCAGCGGCT GGAGGGCCGG GGCCGCCAGG ACATGGGGGT ACCCCCAGGC 
GAGGCGGTGG GCTGCTTCAC TCCACAGAGC CGGCGGCTCC GAGAGCTGCC CCTCACGGCC 
GACGCGCTCA CCTTTGCCGA GGTGTCTAAG GACCCCAAGG GCCTCGAGTG GCTGTGGAGC 
CCCCAGATCG TGGGGCTGTA CAACCGGCTG CTGCAGCGCT GTGAGCTCAA CCGGCACACG 
ACCGAGGCAG CAGCCGGGGC GCTGCAGAAC ATCACCGCAG GGGACCGCAG GTGGGCGGGG 
GTGCTGAGCC GGCTGGCTCT GGAGCAGGAG CGCATACTGA ACCCGCTGCT GGACCGAGTT 
CGGACCGCTG ACCACCACCA GCTGCGCTCA CTGACAGGCC TCATCCGAAA CCTGTCCCGA 
AACGCCAGGA ACAAGGATGA GATGTCCACC AAGCTGGTGA GTCACCTGAT CGAGAAGCTG 
CCCGGCAGCG TGGGTGAGAA GTCTCCTCCA GCCGACGTGC TGATAAACAT CATAGCTGTC 
CTCAACAACC TCGTGGTGGC CAGTCCCGTG GCCGCCCGGG ACCTGCTCTA CTTCGACGGG 
CTCCGCAAGC TGGTCTTCAT CAAGAAGAAG CGGGACAGCC CTGACAGTGA GAAGTCCTCC 
CGGGCGGCCT CTAGCCTCTT GGCCAACCTG TGGCAGTACA ACAAGCTCCA CCGAGACTTC 
CGGGCGAAGG GCTACCGGAA GGAGGACTTC CTGGGGCCGT AG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OBa35017
Clone ID Related Accession (Same CDS sequence) XM_005227345.3 , XM_005227345.4
Accession Version XM_005227345.3 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2427bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-01-25
Organism Bos taurus(cattle)
Product plakophilin-3 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104648.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005227345.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
ATGCAGCCCA GGACTCCTCA GCTCGCAGCA GCCGTCTCCG GGGTGAGCCC CGGGGCCAGC 
AGTCTCCGGA CCGCCAGCAG GCCCGAGGCG GGCGTGTGCT CCCTGGCGCT GCCCTCGGAT 
CTGCAGCTGG ACCGCCGGGG CGCCGAGGGG CCGGAGGCAG AGCGGCTGAG GGCGGCCCGC 
GTCCAGGAGC AGGTCCGCGC GCGCCTGCTG CAGCTGGGCC AGCAGCCACG GCACAATGGG 
CCCGCTGAGC CCGACGGGGC AGCCGAGGCG GCCAGAGGTG CATCCAGGGC TCAGTACCAC 
ACCTTGCAGG CCGGCTTCAG CTCTCGCTCC CAGGGCCTGG GCGGGGAAAC CTCGACCTTC 
CGGCCCATCG CCAAGCCCAC CTACAGCCCC GCCTCCTGGT CTTCCCGCTC GGCCGTGGAC 
CTGAGCTCCA GTCGGAGGCT AAGCTCCGTC CACAACGGGG GTGGTGCCTT TGGGGCTGCA 
GGGTACCGGG GTGCCCCGCC CACTGCACCA GTGCCCGCCC GGCCTGTGTC CTTCCACGAG 
CGTGGTGGGG CAGGCAGCCG GGCAGATTAC GACACCTTGT CCCTGCGCTC ACTGAGGCTG 
GGGGCCGGGG GCCCAGACGA CCGATACAGC GTGGTGTCCG AGCAGCTGGA GCCGGCAGCC 
ACGTCCTCCT ACAGGGCCTT TGCCTACGAG CGCCGGGCCA GCTCCAGCTC TAGCCGGGCT 
GGGGGCCTGG ACTGGCCGGA GGCTACCGAG GGACCACCCA GCCGGACCAT CCGTGCCCCT 
GCCATGCGGA CCCTGCAGCG GTTTCAAAGC AGCCACCGCA GCCGTGGAGT GGCTGCGGGC 
GGGCCCGGGG GCGTCCTGGA GCCCGTGACC CGCGCACCAT CTGTGCGCAG CCTCAGCCTC 
GGTGACTCGG GCCACCTGCC GGACATGCGC GGGCTGGACA GCTACGGCGG CCACCGCACC 
CTGCAGAGGC TCAGCAGCGG ATTCGATGAC ATCGACCTGC CCTCAGCAGT CAAGTACCTC 
ATGGCCTCAG ATCCCAACCT GCAGGTGCTG GGAGCTGCCT ACATTCAGCA CAAGTGTTAC 
AGCGATGCAG CCGCCAAGAA GCAGGCCCGC AGCCTGCAGG CTGTGCCCAG GCTGGTGAAG 
CTCTTCAACC ACGCCAACCA GGAAGTGCAG CGCCACGCCA CAGGCGCCAT GCGCAACCTC 
GTCTACGACA ACGCGGACAA CAAGCTGGCC CTGGTGGAGG AGAACGGCAT CTTCGAGCTG 
CTGCGGGCGC TGCGGGAGCA GGACGACGAG CTCCGCAAGA ACGTCACAGG GATCCTGTGG 
AACCTGTCCT CCAGCGACCA CCTGAAGGAC CGCCTGGCCC GGGACACGCT GGAGCAGCTC 
ACAGATCTGG TGCTGAGCCC CCTGTCGGGG GCGGGCGGGC CACCCCTCAT CCAGCAGAAC 
GCCTCTGAAG CCGAGATATT CTACAACGCC ACCGGCTTCC TCAGGAACCT CAGCTCCGCC 
TCCCAGGCCA CTCGCCAGAA AATGCGTGAG TGTCACGGGC TGGTGGACGC CCTGGTCACC 
TACATCAACC ACGCCCTGGA CGTGGGCAAG TGTGAGGATA AGAGTGTGGA GAACGCCGTG 
TGCGTGCTGA GGAACCTGTC CTACCGCCTG TACGACGAGA TGCCGCCCTC GGCCCTTCAG 
CGGCTGGAGG GCCGGGGCCG CCAGGACATG GGGGTACCCC CAGGCGAGGC GGTGGGCTGC 
TTCACTCCAC AGAGCCGGCG GCTCCGAGAG CTGCCCCTCA CGGCCGACGC GCTCACCTTT 
GCCGAGGTGT CTAAGGACCC CAAGGGCCTC GAGTGGCTGT GGAGCCCCCA GATCGTGGGG 
CTGTACAACC GGCTGCTGCA GCGCTGTGAG CTCAACCGGC ACACGACCGA GGCAGCAGCC 
GGGGCGCTGC AGAACATCAC CGCAGGGGAC CGCAGGTGGG CGGGGGTGCT GAGCCGGCTG 
GCTCTGGAGC AGGAGCGCAT ACTGAACCCG CTGCTGGACC GAGTTCGGAC CGCTGACCAC 
CACCAGCTGC GCTCACTGAC AGGCCTCATC CGAAACCTGT CCCGAAACGC CAGGAACAAG 
GATGAGATGT CCACCAAGCT GGTGAGTCAC CTGATCGAGA AGCTGCCCGG CAGCGTGGGT 
GAGAAGTCTC CTCCAGCCGA CGTGCTGATA AACATCATAG CTGTCCTCAA CAACCTCGTG 
GTGGCCAGTC CCGTGGCCGC CCGGGACCTG CTCTACTTCG ACGGGCTCCG CAAGCTGGTC 
TTCATCAAGA AGAAGCGGGA CAGCCCTGAC AGTGAGAAGT CCTCCCGGGC GGCCTCTAGC 
CTCTTGGCCA ACCTGTGGCA GTACAACAAG CTCCACCGAG ACTTCCGGGC GAAGGGCTAC 
CGGAAGGAGG ACTTCCTGGG GCCGTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005227402.1
CDS667..3093
Translation

Target ORF information:

RefSeq Version XM_005227345.3
Organism Bos taurus(cattle)
Definition Bos taurus plakophilin 3 (PKP3), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005227345.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
ATGCAGCCCA GGACTCCTCA GCTCGCAGCA GCCGTCTCCG GGGTGAGCCC CGGGGCCAGC 
AGTCTCCGGA CCGCCAGCAG GCCCGAGGCG GGCGTGTGCT CCCTGGCGCT GCCCTCGGAT 
CTGCAGCTGG ACCGCCGGGG CGCCGAGGGG CCGGAGGCAG AGCGGCTGAG GGCGGCCCGC 
GTCCAGGAGC AGGTCCGCGC GCGCCTGCTG CAGCTGGGCC AGCAGCCACG GCACAATGGG 
CCCGCTGAGC CCGACGGGGC AGCCGAGGCG GCCAGAGGTG CATCCAGGGC TCAGTACCAC 
ACCTTGCAGG CCGGCTTCAG CTCTCGCTCC CAGGGCCTGG GCGGGGAAAC CTCGACCTTC 
CGGCCCATCG CCAAGCCCAC CTACAGCCCC GCCTCCTGGT CTTCCCGCTC GGCCGTGGAC 
CTGAGCTCCA GTCGGAGGCT AAGCTCCGTC CACAACGGGG GTGGTGCCTT TGGGGCTGCA 
GGGTACCGGG GTGCCCCGCC CACTGCACCA GTGCCCGCCC GGCCTGTGTC CTTCCACGAG 
CGTGGTGGGG CAGGCAGCCG GGCAGATTAC GACACCTTGT CCCTGCGCTC ACTGAGGCTG 
GGGGCCGGGG GCCCAGACGA CCGATACAGC GTGGTGTCCG AGCAGCTGGA GCCGGCAGCC 
ACGTCCTCCT ACAGGGCCTT TGCCTACGAG CGCCGGGCCA GCTCCAGCTC TAGCCGGGCT 
GGGGGCCTGG ACTGGCCGGA GGCTACCGAG GGACCACCCA GCCGGACCAT CCGTGCCCCT 
GCCATGCGGA CCCTGCAGCG GTTTCAAAGC AGCCACCGCA GCCGTGGAGT GGCTGCGGGC 
GGGCCCGGGG GCGTCCTGGA GCCCGTGACC CGCGCACCAT CTGTGCGCAG CCTCAGCCTC 
GGTGACTCGG GCCACCTGCC GGACATGCGC GGGCTGGACA GCTACGGCGG CCACCGCACC 
CTGCAGAGGC TCAGCAGCGG ATTCGATGAC ATCGACCTGC CCTCAGCAGT CAAGTACCTC 
ATGGCCTCAG ATCCCAACCT GCAGGTGCTG GGAGCTGCCT ACATTCAGCA CAAGTGTTAC 
AGCGATGCAG CCGCCAAGAA GCAGGCCCGC AGCCTGCAGG CTGTGCCCAG GCTGGTGAAG 
CTCTTCAACC ACGCCAACCA GGAAGTGCAG CGCCACGCCA CAGGCGCCAT GCGCAACCTC 
GTCTACGACA ACGCGGACAA CAAGCTGGCC CTGGTGGAGG AGAACGGCAT CTTCGAGCTG 
CTGCGGGCGC TGCGGGAGCA GGACGACGAG CTCCGCAAGA ACGTCACAGG GATCCTGTGG 
AACCTGTCCT CCAGCGACCA CCTGAAGGAC CGCCTGGCCC GGGACACGCT GGAGCAGCTC 
ACAGATCTGG TGCTGAGCCC CCTGTCGGGG GCGGGCGGGC CACCCCTCAT CCAGCAGAAC 
GCCTCTGAAG CCGAGATATT CTACAACGCC ACCGGCTTCC TCAGGAACCT CAGCTCCGCC 
TCCCAGGCCA CTCGCCAGAA AATGCGTGAG TGTCACGGGC TGGTGGACGC CCTGGTCACC 
TACATCAACC ACGCCCTGGA CGTGGGCAAG TGTGAGGATA AGAGTGTGGA GAACGCCGTG 
TGCGTGCTGA GGAACCTGTC CTACCGCCTG TACGACGAGA TGCCGCCCTC GGCCCTTCAG 
CGGCTGGAGG GCCGGGGCCG CCAGGACATG GGGGTACCCC CAGGCGAGGC GGTGGGCTGC 
TTCACTCCAC AGAGCCGGCG GCTCCGAGAG CTGCCCCTCA CGGCCGACGC GCTCACCTTT 
GCCGAGGTGT CTAAGGACCC CAAGGGCCTC GAGTGGCTGT GGAGCCCCCA GATCGTGGGG 
CTGTACAACC GGCTGCTGCA GCGCTGTGAG CTCAACCGGC ACACGACCGA GGCAGCAGCC 
GGGGCGCTGC AGAACATCAC CGCAGGGGAC CGCAGGTGGG CGGGGGTGCT GAGCCGGCTG 
GCTCTGGAGC AGGAGCGCAT ACTGAACCCG CTGCTGGACC GAGTTCGGAC CGCTGACCAC 
CACCAGCTGC GCTCACTGAC AGGCCTCATC CGAAACCTGT CCCGAAACGC CAGGAACAAG 
GATGAGATGT CCACCAAGCT GGTGAGTCAC CTGATCGAGA AGCTGCCCGG CAGCGTGGGT 
GAGAAGTCTC CTCCAGCCGA CGTGCTGATA AACATCATAG CTGTCCTCAA CAACCTCGTG 
GTGGCCAGTC CCGTGGCCGC CCGGGACCTG CTCTACTTCG ACGGGCTCCG CAAGCTGGTC 
TTCATCAAGA AGAAGCGGGA CAGCCCTGAC AGTGAGAAGT CCTCCCGGGC GGCCTCTAGC 
CTCTTGGCCA ACCTGTGGCA GTACAACAAG CTCCACCGAG ACTTCCGGGC GAAGGGCTAC 
CGGAAGGAGG ACTTCCTGGG GCCGTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OBa35017
Clone ID Related Accession (Same CDS sequence) XM_005227345.3 , XM_005227345.4
Accession Version XM_005227345.4 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2427bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-05-06
Organism Bos taurus(cattle)
Product plakophilin-3 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037356.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005227345.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
ATGCAGCCCA GGACTCCTCA GCTCGCAGCA GCCGTCTCCG GGGTGAGCCC CGGGGCCAGC 
AGTCTCCGGA CCGCCAGCAG GCCCGAGGCG GGCGTGTGCT CCCTGGCGCT GCCCTCGGAT 
CTGCAGCTGG ACCGCCGGGG CGCCGAGGGG CCGGAGGCAG AGCGGCTGAG GGCGGCCCGC 
GTCCAGGAGC AGGTCCGCGC GCGCCTGCTG CAGCTGGGCC AGCAGCCACG GCACAATGGG 
CCCGCTGAGC CCGACGGGGC AGCCGAGGCG GCCAGAGGTG CATCCAGGGC TCAGTACCAC 
ACCTTGCAGG CCGGCTTCAG CTCTCGCTCC CAGGGCCTGG GCGGGGAAAC CTCGACCTTC 
CGGCCCATCG CCAAGCCCAC CTACAGCCCC GCCTCCTGGT CTTCCCGCTC GGCCGTGGAC 
CTGAGCTCCA GTCGGAGGCT AAGCTCCGTC CACAACGGGG GTGGTGCCTT TGGGGCTGCA 
GGGTACCGGG GTGCCCCGCC CACTGCACCA GTGCCCGCCC GGCCTGTGTC CTTCCACGAG 
CGTGGTGGGG CAGGCAGCCG GGCAGATTAC GACACCTTGT CCCTGCGCTC ACTGAGGCTG 
GGGGCCGGGG GCCCAGACGA CCGATACAGC GTGGTGTCCG AGCAGCTGGA GCCGGCAGCC 
ACGTCCTCCT ACAGGGCCTT TGCCTACGAG CGCCGGGCCA GCTCCAGCTC TAGCCGGGCT 
GGGGGCCTGG ACTGGCCGGA GGCTACCGAG GGACCACCCA GCCGGACCAT CCGTGCCCCT 
GCCATGCGGA CCCTGCAGCG GTTTCAAAGC AGCCACCGCA GCCGTGGAGT GGCTGCGGGC 
GGGCCCGGGG GCGTCCTGGA GCCCGTGACC CGCGCACCAT CTGTGCGCAG CCTCAGCCTC 
GGTGACTCGG GCCACCTGCC GGACATGCGC GGGCTGGACA GCTACGGCGG CCACCGCACC 
CTGCAGAGGC TCAGCAGCGG ATTCGATGAC ATCGACCTGC CCTCAGCAGT CAAGTACCTC 
ATGGCCTCAG ATCCCAACCT GCAGGTGCTG GGAGCTGCCT ACATTCAGCA CAAGTGTTAC 
AGCGATGCAG CCGCCAAGAA GCAGGCCCGC AGCCTGCAGG CTGTGCCCAG GCTGGTGAAG 
CTCTTCAACC ACGCCAACCA GGAAGTGCAG CGCCACGCCA CAGGCGCCAT GCGCAACCTC 
GTCTACGACA ACGCGGACAA CAAGCTGGCC CTGGTGGAGG AGAACGGCAT CTTCGAGCTG 
CTGCGGGCGC TGCGGGAGCA GGACGACGAG CTCCGCAAGA ACGTCACAGG GATCCTGTGG 
AACCTGTCCT CCAGCGACCA CCTGAAGGAC CGCCTGGCCC GGGACACGCT GGAGCAGCTC 
ACAGATCTGG TGCTGAGCCC CCTGTCGGGG GCGGGCGGGC CACCCCTCAT CCAGCAGAAC 
GCCTCTGAAG CCGAGATATT CTACAACGCC ACCGGCTTCC TCAGGAACCT CAGCTCCGCC 
TCCCAGGCCA CTCGCCAGAA AATGCGTGAG TGTCACGGGC TGGTGGACGC CCTGGTCACC 
TACATCAACC ACGCCCTGGA CGTGGGCAAG TGTGAGGATA AGAGTGTGGA GAACGCCGTG 
TGCGTGCTGA GGAACCTGTC CTACCGCCTG TACGACGAGA TGCCGCCCTC GGCCCTTCAG 
CGGCTGGAGG GCCGGGGCCG CCAGGACATG GGGGTACCCC CAGGCGAGGC GGTGGGCTGC 
TTCACTCCAC AGAGCCGGCG GCTCCGAGAG CTGCCCCTCA CGGCCGACGC GCTCACCTTT 
GCCGAGGTGT CTAAGGACCC CAAGGGCCTC GAGTGGCTGT GGAGCCCCCA GATCGTGGGG 
CTGTACAACC GGCTGCTGCA GCGCTGTGAG CTCAACCGGC ACACGACCGA GGCAGCAGCC 
GGGGCGCTGC AGAACATCAC CGCAGGGGAC CGCAGGTGGG CGGGGGTGCT GAGCCGGCTG 
GCTCTGGAGC AGGAGCGCAT ACTGAACCCG CTGCTGGACC GAGTTCGGAC CGCTGACCAC 
CACCAGCTGC GCTCACTGAC AGGCCTCATC CGAAACCTGT CCCGAAACGC CAGGAACAAG 
GATGAGATGT CCACCAAGCT GGTGAGTCAC CTGATCGAGA AGCTGCCCGG CAGCGTGGGT 
GAGAAGTCTC CTCCAGCCGA CGTGCTGATA AACATCATAG CTGTCCTCAA CAACCTCGTG 
GTGGCCAGTC CCGTGGCCGC CCGGGACCTG CTCTACTTCG ACGGGCTCCG CAAGCTGGTC 
TTCATCAAGA AGAAGCGGGA CAGCCCTGAC AGTGAGAAGT CCTCCCGGGC GGCCTCTAGC 
CTCTTGGCCA ACCTGTGGCA GTACAACAAG CTCCACCGAG ACTTCCGGGC GAAGGGCTAC 
CGGAAGGAGG ACTTCCTGGG GCCGTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005227402.1
CDS69..2495
Translation

Target ORF information:

RefSeq Version XM_005227345.4
Organism Bos taurus(cattle)
Definition Bos taurus plakophilin 3 (PKP3), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005227345.4

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
ATGCAGCCCA GGACTCCTCA GCTCGCAGCA GCCGTCTCCG GGGTGAGCCC CGGGGCCAGC 
AGTCTCCGGA CCGCCAGCAG GCCCGAGGCG GGCGTGTGCT CCCTGGCGCT GCCCTCGGAT 
CTGCAGCTGG ACCGCCGGGG CGCCGAGGGG CCGGAGGCAG AGCGGCTGAG GGCGGCCCGC 
GTCCAGGAGC AGGTCCGCGC GCGCCTGCTG CAGCTGGGCC AGCAGCCACG GCACAATGGG 
CCCGCTGAGC CCGACGGGGC AGCCGAGGCG GCCAGAGGTG CATCCAGGGC TCAGTACCAC 
ACCTTGCAGG CCGGCTTCAG CTCTCGCTCC CAGGGCCTGG GCGGGGAAAC CTCGACCTTC 
CGGCCCATCG CCAAGCCCAC CTACAGCCCC GCCTCCTGGT CTTCCCGCTC GGCCGTGGAC 
CTGAGCTCCA GTCGGAGGCT AAGCTCCGTC CACAACGGGG GTGGTGCCTT TGGGGCTGCA 
GGGTACCGGG GTGCCCCGCC CACTGCACCA GTGCCCGCCC GGCCTGTGTC CTTCCACGAG 
CGTGGTGGGG CAGGCAGCCG GGCAGATTAC GACACCTTGT CCCTGCGCTC ACTGAGGCTG 
GGGGCCGGGG GCCCAGACGA CCGATACAGC GTGGTGTCCG AGCAGCTGGA GCCGGCAGCC 
ACGTCCTCCT ACAGGGCCTT TGCCTACGAG CGCCGGGCCA GCTCCAGCTC TAGCCGGGCT 
GGGGGCCTGG ACTGGCCGGA GGCTACCGAG GGACCACCCA GCCGGACCAT CCGTGCCCCT 
GCCATGCGGA CCCTGCAGCG GTTTCAAAGC AGCCACCGCA GCCGTGGAGT GGCTGCGGGC 
GGGCCCGGGG GCGTCCTGGA GCCCGTGACC CGCGCACCAT CTGTGCGCAG CCTCAGCCTC 
GGTGACTCGG GCCACCTGCC GGACATGCGC GGGCTGGACA GCTACGGCGG CCACCGCACC 
CTGCAGAGGC TCAGCAGCGG ATTCGATGAC ATCGACCTGC CCTCAGCAGT CAAGTACCTC 
ATGGCCTCAG ATCCCAACCT GCAGGTGCTG GGAGCTGCCT ACATTCAGCA CAAGTGTTAC 
AGCGATGCAG CCGCCAAGAA GCAGGCCCGC AGCCTGCAGG CTGTGCCCAG GCTGGTGAAG 
CTCTTCAACC ACGCCAACCA GGAAGTGCAG CGCCACGCCA CAGGCGCCAT GCGCAACCTC 
GTCTACGACA ACGCGGACAA CAAGCTGGCC CTGGTGGAGG AGAACGGCAT CTTCGAGCTG 
CTGCGGGCGC TGCGGGAGCA GGACGACGAG CTCCGCAAGA ACGTCACAGG GATCCTGTGG 
AACCTGTCCT CCAGCGACCA CCTGAAGGAC CGCCTGGCCC GGGACACGCT GGAGCAGCTC 
ACAGATCTGG TGCTGAGCCC CCTGTCGGGG GCGGGCGGGC CACCCCTCAT CCAGCAGAAC 
GCCTCTGAAG CCGAGATATT CTACAACGCC ACCGGCTTCC TCAGGAACCT CAGCTCCGCC 
TCCCAGGCCA CTCGCCAGAA AATGCGTGAG TGTCACGGGC TGGTGGACGC CCTGGTCACC 
TACATCAACC ACGCCCTGGA CGTGGGCAAG TGTGAGGATA AGAGTGTGGA GAACGCCGTG 
TGCGTGCTGA GGAACCTGTC CTACCGCCTG TACGACGAGA TGCCGCCCTC GGCCCTTCAG 
CGGCTGGAGG GCCGGGGCCG CCAGGACATG GGGGTACCCC CAGGCGAGGC GGTGGGCTGC 
TTCACTCCAC AGAGCCGGCG GCTCCGAGAG CTGCCCCTCA CGGCCGACGC GCTCACCTTT 
GCCGAGGTGT CTAAGGACCC CAAGGGCCTC GAGTGGCTGT GGAGCCCCCA GATCGTGGGG 
CTGTACAACC GGCTGCTGCA GCGCTGTGAG CTCAACCGGC ACACGACCGA GGCAGCAGCC 
GGGGCGCTGC AGAACATCAC CGCAGGGGAC CGCAGGTGGG CGGGGGTGCT GAGCCGGCTG 
GCTCTGGAGC AGGAGCGCAT ACTGAACCCG CTGCTGGACC GAGTTCGGAC CGCTGACCAC 
CACCAGCTGC GCTCACTGAC AGGCCTCATC CGAAACCTGT CCCGAAACGC CAGGAACAAG 
GATGAGATGT CCACCAAGCT GGTGAGTCAC CTGATCGAGA AGCTGCCCGG CAGCGTGGGT 
GAGAAGTCTC CTCCAGCCGA CGTGCTGATA AACATCATAG CTGTCCTCAA CAACCTCGTG 
GTGGCCAGTC CCGTGGCCGC CCGGGACCTG CTCTACTTCG ACGGGCTCCG CAAGCTGGTC 
TTCATCAAGA AGAAGCGGGA CAGCCCTGAC AGTGAGAAGT CCTCCCGGGC GGCCTCTAGC 
CTCTTGGCCA ACCTGTGGCA GTACAACAAG CTCCACCGAG ACTTCCGGGC GAAGGGCTAC 
CGGAAGGAGG ACTTCCTGGG GCCGTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

A whole-genome assembly of the domestic cow, Bos taurus.
Genome biology10(4)R42(2009)
Zimin AV,Delcher AL,Florea L,Kelley DR,Schatz MC,Puiu D,Hanrahan F,Pertea G,Van Tassell CP,Sonstegard TS,Mar?ais G,Roberts M,Subramanian P,Yorke JA,Salzberg SL