Gene Symbol |
CLSTN2 |
Entrez Gene ID |
530999 |
Full Name |
calsyntenin 2 |
General protein information |
- Preferred Names
calsyntenin 2
Names
calsyntenin-2
|
Gene Type |
protein-coding |
Organism |
Bos taurus(cattle) |
Pan troglodytes (chimpanzee) |
CLSTN2 |
XP_526327.2 |
|
CLSTN2 |
XP_001113205.1 |
Bos taurus (cattle) |
CLSTN2 |
NP_001193686.1 |
Mus musculus (house mouse) |
Clstn2 |
NP_071714.2 |
Drosophila melanogaster (fruit fly) |
Cals |
NP_726646.1 |
Anopheles gambiae (African malaria mosquito) |
AgaP_AGAP007103 |
XP_001237120.2 |
Homo sapiens (human) |
CLSTN2 |
NP_071414.2 |
Canis lupus familiaris (dog) |
CLSTN2 |
XP_534287.3 |
Rattus norvegicus (Norway rat) |
Clstn2 |
NP_599204.1 |
Xenopus tropicalis (tropical clawed frog) |
clstn2 |
XP_002941239.2 |
Gallus gallus (chicken) |
CLSTN2 |
XP_422633.4 |
Danio rerio (zebrafish) |
clstn2 |
NP_001153311.1 |
Related articles in PubMed
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following CLSTN2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CLSTN2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
OBa245719 |
Clone ID Related Accession (Same CDS sequence) |
NM_001206757.2
|
Accession Version |
NM_001206757.2 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 2865bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-04-22 |
Organism |
Bos taurus(cattle) |
Product |
calsyntenin-2 precursor |
Comment |
Comment: INFERRED REFSEQ: This record is predicted by genome sequence analysis and is not yet supported by experimental evidence. The reference sequence was derived from NKLS02000001.1. On Apr 23, 2019 this sequence version replaced NM_001206757.1.
Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments.
##Evidence-Data-START##
RNAseq introns :: single sample supports all introns SAMN06299490 [ECO:0000348]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821
| ATGCTGACTG GAAGGCTGTG CTGGGTGCCG CTCCTGCTGG CGCTGGGCGT GGGGAGCGGC AGCGGCGGCG GGGAGAGCGG GCGGCGCCGC CTCCTCGCGG CTAAAGTGAA CAAGCACAAA CCATGGATTG AGACTTCGTA TCATGGAGTC ATAACAGAGA ACAATGACAC AGTCATTTTG GACCCACCAT TGGTCGCCCT GGATAAAGAT GCACCAGTTC CTTTTGCAGG AGAAATCTGT GCATTCAAGA TACATGGCCA GGAGTTGCCC TTTGAGGCTG TGGTACTCAA CAAGACATCT GGAGAAGGCC GGCTCCGTGC CAAGAGCCCC ATTGACTGTG AGCTGCAGAA GGAGTACACG TTCATCATCC AGGCCTATGA CTGTGGCACG GGGCCCCGGG AGACAGCCTG GAAGAAATCT CACAAGGCCG TGGTCCATAT CCAGGTGAAG GACGTCAATG AGTTTGCTCC CACCTTCAAA GAGCCGGCCT ACAAGGCTAT CGTGACGGAG GGCAAGATCT ATGACAGCAT CCTGCAAGTG GAGGCCATCG ACGAAGACTG CTCCCCCCAG TACAGCCAGA TTTGCAACTA TGAAATCGTC ACAACTGATG TGCCTTTTGC CATCGACAGG AATGGCAACG TCAGAAACAC GGAGAAGCTG AGCTATGACA AGCAGCACCA GTATGAGATC CTGGTAACCG CCTATGACTG TGGACAGAAG CCCGCAGCCC AGGACACCCT GGTGCAGGTG GACGTGAAGC CAGTTTGCAA GCCTGGCTGG CAAGACTGGA CCAAGAGGAT TGAGTACCAG CCTGGCTCAG GGAGCGTGCC CCTGTTCCCC AGCATCCACC TGGAGACGTG CGATGGGGCC GTGTCCTCCA TCCAGATCAC CACGGAGCTG CAGACCAACT ACATTGGGAA GGGCTGTGAC CGGGAGACCT ACTCTGAGAA GTCCCTTCAG AAATTATGTG GAGCTTCCTC TGGCATCATT GACCTCTTGC CATCCCCCAG TGCTGCCACC AACTGGACCA TAGGACTGCT GGTGGATAGC AGTGAAATGA TCTTCAAGTT CGATGGCAGG CAGGGTGCCA AGATCCCTGA TGGAGTTGTG CCCAAGAACC TGACCGACCA GTTCACCATC ACCATGTGGA TGAAGCATGG CCCCAGCCCT GGCGTGAGAG CTGAGAAGGA AACCATCCTC TGCAACTCAG ATAAAACCGA AATGAACCGG CATCACTACG CCCTGTATGT GCACAACTGC CGCCTCGTCT TCCTCTTGCG CAAGGATTTT GACCAGGCAG ACACCTTCCG CCCAGCAGAG TTCCACTGGA AGCTGGACCA GATTTGTGAC AAAGAATGGC ATTACTATGT CATCAATGTG GAGTTTCCTG TGGTCACCTT ATACATGGAT GGAGCAACGT ATGAACCATA CCTGGTGACT AACGATTGGC CCATTCATCC ATCTCACATT GCCATGCAAC TGACAGTCGG CGCTTGTTGG CAAGGAGGAG AAGTCACCAA GCCACGATTT GCTCAATTCT TCCACGGCAG CCTGGCCAGT CTCACCATTC GCCCTGGCAA AATGGACAGT CAGAAGGTGA TTTCCTGCCT GCAGGCCTGC AAGGAAGGGC TGGATATCAA TTCCCTGGAA AGCCTGGGCC AAGGAATAAA GTATCATTTC AACCCCTCGC AGTCCGTCCT GGTAATGGAA GGTGATGACA TCGGGAATAT CAACCGTGCC CTCCAGAAGG TCTCCTACAT CAACTCCAGG CAGTTCCCAA CTGCGGGTGT GCGGCGCCTG AAAGTCTCTT CCAAAGTCCA GTGCTTTGGA GAAGATGTGT GTATCAGCAT CCCTGACATA GATGCCTACG TGATGGTGCT GCAGGCGGTC GAGCCCCAGA TCACCCTCCA TGGCACAGAC CGCTTCTGGA GACCCGCCGC CCAGTTTGAA AGTGCCAGAG GGGTGATTCT CTTCCCTGAC ATCAAGATTG TGAGCACCTT CACCAAAGCT GAGGCTCCCA GTGACTTGAA GACCACAGCC CCCAAATCAG CAGTTTTAGA AGAAATGCTT CACAACTTAG ATTTCTGTGA CATTTTAGTG CTGGGAGGGG ACTTGGACCC CAGACAGGAG TGCTTGGAGC TCAACCACAG TGAGCTCCAC CAGCGACACC TGGACGCCAC CAACTCCACA GCAGGTTACT CCATCTACGG TGTGGGCTCC ATGAGCCGCT ACGAGCAGGT GCTGCGTCAC ATCCGTTACC GCAACTGGCA TCCGGCTGCC CTGGAGTCCC GGCACTTCAG GATCAAGTGC TCAGAACTCA ACGGGCGCTA CACCAGCAAT GAGTTCAACC TGGAGGTCAG CGTCCTCCAT GAGGTCAGAG TCCCGGACAG TGAGCACGTC AACCACCTTA TCGCGCAGCC ACCATTCCTC CAGTCCGTCC ACCACCCGGA GTCCCAGACT AGCATCCAGC ACAGTTCAGC GGTCCCAAGC ATTGCCACAG TGGTCATCAT CATCTCCGTG TGCATGCTAG TGTTTGTCGT GGCCATGGGC GTGTACCGGG TCCGGATCGC CCACCAGCAC TTCATCCAAG AGACTGAGGC TGCCAAGGAA GCAGAGATGG ACTGGGACGA TTCTGCACTC ACTATCACGG TCAACCCCAT GGAGAAACAC GGAGCCCCAG GGCGTGGGGA AGAGGAGACC GAGGAAGAGG AGGAGGAGGA AGCGGAGGAA GACAGCTCCA GCAGCAGCGA GTCCGAGGGC AGCGAAGAGG AGGAGGAGGA GGAAGGGGCG GGCAGGGGCA GACACGGGCA GAGTGGAGCC AGGCAAGCCC AGCTGGAGTG GGACGACTCC ACCCTCCCCT ACTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001193686.2 |
CDS | 1..2865 |
Translation | |
Target ORF information:
RefSeq Version | NM_001206757.2 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus calsyntenin 2 (CLSTN2), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001206757.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821
| ATGCTGACTG GAAGGCTGTG CTGGGTGCCG CTCCTGCTGG CGCTGGGCGT GGGGAGCGGC AGCGGCGGCG GGGAGAGCGG GCGGCGCCGC CTCCTCGCGG CTAAAGTGAA CAAGCACAAA CCATGGATTG AGACTTCGTA TCATGGAGTC ATAACAGAGA ACAATGACAC AGTCATTTTG GACCCACCAT TGGTCGCCCT GGATAAAGAT GCACCAGTTC CTTTTGCAGG AGAAATCTGT GCATTCAAGA TACATGGCCA GGAGTTGCCC TTTGAGGCTG TGGTACTCAA CAAGACATCT GGAGAAGGCC GGCTCCGTGC CAAGAGCCCC ATTGACTGTG AGCTGCAGAA GGAGTACACG TTCATCATCC AGGCCTATGA CTGTGGCACG GGGCCCCGGG AGACAGCCTG GAAGAAATCT CACAAGGCCG TGGTCCATAT CCAGGTGAAG GACGTCAATG AGTTTGCTCC CACCTTCAAA GAGCCGGCCT ACAAGGCTAT CGTGACGGAG GGCAAGATCT ATGACAGCAT CCTGCAAGTG GAGGCCATCG ACGAAGACTG CTCCCCCCAG TACAGCCAGA TTTGCAACTA TGAAATCGTC ACAACTGATG TGCCTTTTGC CATCGACAGG AATGGCAACG TCAGAAACAC GGAGAAGCTG AGCTATGACA AGCAGCACCA GTATGAGATC CTGGTAACCG CCTATGACTG TGGACAGAAG CCCGCAGCCC AGGACACCCT GGTGCAGGTG GACGTGAAGC CAGTTTGCAA GCCTGGCTGG CAAGACTGGA CCAAGAGGAT TGAGTACCAG CCTGGCTCAG GGAGCGTGCC CCTGTTCCCC AGCATCCACC TGGAGACGTG CGATGGGGCC GTGTCCTCCA TCCAGATCAC CACGGAGCTG CAGACCAACT ACATTGGGAA GGGCTGTGAC CGGGAGACCT ACTCTGAGAA GTCCCTTCAG AAATTATGTG GAGCTTCCTC TGGCATCATT GACCTCTTGC CATCCCCCAG TGCTGCCACC AACTGGACCA TAGGACTGCT GGTGGATAGC AGTGAAATGA TCTTCAAGTT CGATGGCAGG CAGGGTGCCA AGATCCCTGA TGGAGTTGTG CCCAAGAACC TGACCGACCA GTTCACCATC ACCATGTGGA TGAAGCATGG CCCCAGCCCT GGCGTGAGAG CTGAGAAGGA AACCATCCTC TGCAACTCAG ATAAAACCGA AATGAACCGG CATCACTACG CCCTGTATGT GCACAACTGC CGCCTCGTCT TCCTCTTGCG CAAGGATTTT GACCAGGCAG ACACCTTCCG CCCAGCAGAG TTCCACTGGA AGCTGGACCA GATTTGTGAC AAAGAATGGC ATTACTATGT CATCAATGTG GAGTTTCCTG TGGTCACCTT ATACATGGAT GGAGCAACGT ATGAACCATA CCTGGTGACT AACGATTGGC CCATTCATCC ATCTCACATT GCCATGCAAC TGACAGTCGG CGCTTGTTGG CAAGGAGGAG AAGTCACCAA GCCACGATTT GCTCAATTCT TCCACGGCAG CCTGGCCAGT CTCACCATTC GCCCTGGCAA AATGGACAGT CAGAAGGTGA TTTCCTGCCT GCAGGCCTGC AAGGAAGGGC TGGATATCAA TTCCCTGGAA AGCCTGGGCC AAGGAATAAA GTATCATTTC AACCCCTCGC AGTCCGTCCT GGTAATGGAA GGTGATGACA TCGGGAATAT CAACCGTGCC CTCCAGAAGG TCTCCTACAT CAACTCCAGG CAGTTCCCAA CTGCGGGTGT GCGGCGCCTG AAAGTCTCTT CCAAAGTCCA GTGCTTTGGA GAAGATGTGT GTATCAGCAT CCCTGACATA GATGCCTACG TGATGGTGCT GCAGGCGGTC GAGCCCCAGA TCACCCTCCA TGGCACAGAC CGCTTCTGGA GACCCGCCGC CCAGTTTGAA AGTGCCAGAG GGGTGATTCT CTTCCCTGAC ATCAAGATTG TGAGCACCTT CACCAAAGCT GAGGCTCCCA GTGACTTGAA GACCACAGCC CCCAAATCAG CAGTTTTAGA AGAAATGCTT CACAACTTAG ATTTCTGTGA CATTTTAGTG CTGGGAGGGG ACTTGGACCC CAGACAGGAG TGCTTGGAGC TCAACCACAG TGAGCTCCAC CAGCGACACC TGGACGCCAC CAACTCCACA GCAGGTTACT CCATCTACGG TGTGGGCTCC ATGAGCCGCT ACGAGCAGGT GCTGCGTCAC ATCCGTTACC GCAACTGGCA TCCGGCTGCC CTGGAGTCCC GGCACTTCAG GATCAAGTGC TCAGAACTCA ACGGGCGCTA CACCAGCAAT GAGTTCAACC TGGAGGTCAG CGTCCTCCAT GAGGTCAGAG TCCCGGACAG TGAGCACGTC AACCACCTTA TCGCGCAGCC ACCATTCCTC CAGTCCGTCC ACCACCCGGA GTCCCAGACT AGCATCCAGC ACAGTTCAGC GGTCCCAAGC ATTGCCACAG TGGTCATCAT CATCTCCGTG TGCATGCTAG TGTTTGTCGT GGCCATGGGC GTGTACCGGG TCCGGATCGC CCACCAGCAC TTCATCCAAG AGACTGAGGC TGCCAAGGAA GCAGAGATGG ACTGGGACGA TTCTGCACTC ACTATCACGG TCAACCCCAT GGAGAAACAC GGAGCCCCAG GGCGTGGGGA AGAGGAGACC GAGGAAGAGG AGGAGGAGGA AGCGGAGGAA GACAGCTCCA GCAGCAGCGA GTCCGAGGGC AGCGAAGAGG AGGAGGAGGA GGAAGGGGCG GGCAGGGGCA GACACGGGCA GAGTGGAGCC AGGCAAGCCC AGCTGGAGTG GGACGACTCC ACCCTCCCCT ACTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa218794 |
Clone ID Related Accession (Same CDS sequence) |
XM_005201877.4
|
Accession Version |
XM_005201877.4 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 2871bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
calsyntenin-2 isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037328.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On May 7, 2018 this sequence version replaced XM_005201877.3.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821
| ATGCTGACTG GAAGGCTGTG CTGGGTGCCG CTCCTGCTGG CGCTGGGCGT GGGGAGCGGC AGCGGCGGCG GGGAGAGCGG GCGGCGCCGC CTCCTCGCGG CTAAAGTGAA CAAGCACAAA CCATGGATTG AGACTTCGTA TCATGGAGTC ATAACAGAGA ACAATGACAC AGTCATTTTG GACCCACCAT TGGTCGCCCT GGATAAAGAT GCACCAGTTC CTTTTGCAGG AGAAATCTGT GCATTCAAGA TACATGGCCA GGAGTTGCCC TTTGAGGCTG TGGTACTCAA CAAGACATCT GGAGAAGGCC GGCTCCGTGC CAAGAGCCCC ATTGACTGTG AGCTGCAGAA GGAGTACACG TTCATCATCC AGGCCTATGA CTGTGGCACG GGGCCCCGGG AGACAGCCTG GAAGAAATCT CACAAGGCCG TGGTCCATAT CCAGGTGAAG GACGTCAATG AGTTTGCTCC CACCTTCAAA GAGCCGGCCT ACAAGGCTAT CGTGACGGAG GGCAAGATCT ATGACAGCAT CCTGCAAGTG GAGGCCATCG ACGAAGACTG CTCCCCCCAG TACAGCCAGA TTTGCAACTA TGAAATCGTC ACAACTGATG TGCCTTTTGC CATCGACAGG AATGGCAACG TCAGAAACAC GGAGAAGCTG AGCTATGACA AGCAGCACCA GTATGAGATC CTGGTAACCG CCTATGACTG TGGACAGAAG CCCGCAGCCC AGGACACCCT GGTGCAGGTG GACGTGAAGC CAGTTTGCAA GCCTGGCTGG CAAGACTGGA CCAAGAGGAT TGAGTACCAG CCTGGCTCAG GGAGCGTGCC CCTGTTCCCC AGCATCCACC TGGAGACGTG CGATGGGGCC GTGTCCTCCA TCCAGATCAC CACGGAGCTG CAGACCAACT ACATTGGGAA GGGCTGTGAC CGGGAGACCT ACTCTGAGAA GTCCCTTCAG AAATTATGTG GAGCTTCCTC TGGCATCATT GACCTCTTGC CATCCCCCAG TGCTGCCACC AACTGGACCA TAGGACTGCT GGTGGATAGC AGTGAAATGA TCTTCAAGTT CGATGGCAGG CAGGGTGCCA AGATCCCTGA TGGAGTTGTG CCCAAGAACC TGACCGACCA GTTCACCATC ACCATGTGGA TGAAGCATGG CCCCAGCCCT GGCGTGAGAG CTGAGAAGGA AACCATCCTC TGCAACTCAG ATAAAACCGA AATGAACCGG CATCACTACG CCCTGTATGT GCACAACTGC CGCCTCGTCT TCCTCTTGCG CAAGGATTTT GACCAGGCAG ACACCTTCCG CCCAGCAGAG TTCCACTGGA AGCTGGACCA GATTTGTGAC AAAGAATGGC ATTACTATGT CATCAATGTG GAGTTTCCTG TGGTCACCTT ATACATGGAT GGAGCAACGT ATGAACCATA CCTGGTGACT AACGATTGGC CCATTCATCC ATCTCACATT GCCATGCAAC TGACAGTCGG CGCTTGTTGG CAAGGAGGAG AAGTCACCAA GCCACGATTT GCTCAATTCT TCCACGGCAG CCTGGCCAGT CTCACCATTC GCCCTGGCAA AATGGACAGT CAGAAGGTGA TTTCCTGCCT GCAGGCCTGC AAGGAAGGGC TGGATATCAA TTCCCTGGAA AGCCTGGGCC AAGGAATAAA GTATCATTTC AACCCCTCGC AGTCCGTCCT GGTAATGGAA GGTGATGACA TCGGGAATAT CAACCGTGCC CTCCAGAAGG TCTCCTACAT CAACTCCAGG CAGTTCCCAA CTGCGGGTGT GCGGCGCCTG AAAGTCTCTT CCAAAGTCCA GTGCTTTGGA GAAGATGTGT GTATCAGCAT CCCTGACATA GATGCCTACG TGATGGTGCT GCAGGCGGTC GAGCCCCAGA TCACCCTCCA TGGCACAGAC CGCTTCTGGA GACCCGCCGC CCAGTTTGAA AGTGCCAGAG GGGTGATTCT CTTCCCTGAC ATCAAGATTG TGAGCACCTT CACCAAAGCT GAGGCTCCCA GTGACTTGAA GACCACAGGT ACAGCCCCCA AATCAGCAGT TTTAGAAGAA ATGCTTCACA ACTTAGATTT CTGTGACATT TTAGTGCTGG GAGGGGACTT GGACCCCAGA CAGGAGTGCT TGGAGCTCAA CCACAGTGAG CTCCACCAGC GACACCTGGA CGCCACCAAC TCCACAGCAG GTTACTCCAT CTACGGTGTG GGCTCCATGA GCCGCTACGA GCAGGTGCTG CGTCACATCC GTTACCGCAA CTGGCATCCG GCTGCCCTGG AGTCCCGGCA CTTCAGGATC AAGTGCTCAG AACTCAACGG GCGCTACACC AGCAATGAGT TCAACCTGGA GGTCAGCGTC CTCCATGAGG TCAGAGTCCC GGACAGTGAG CACGTCAACC ACCTTATCGC GCAGCCACCA TTCCTCCAGT CCGTCCACCA CCCGGAGTCC CAGACTAGCA TCCAGCACAG TTCAGCGGTC CCAAGCATTG CCACAGTGGT CATCATCATC TCCGTGTGCA TGCTAGTGTT TGTCGTGGCC ATGGGCGTGT ACCGGGTCCG GATCGCCCAC CAGCACTTCA TCCAAGAGAC TGAGGCTGCC AAGGAAGCAG AGATGGACTG GGACGATTCT GCACTCACTA TCACGGTCAA CCCCATGGAG AAACACGGAG CCCCAGGGCG TGGGGAAGAG GAGACCGAGG AAGAGGAGGA GGAGGAAGCG GAGGAAGACA GCTCCAGCAG CAGCGAGTCC GAGGGCAGCG AAGAGGAGGA GGAGGAGGAA GGGGCGGGCA GGGGCAGACA CGGGCAGAGT GGAGCCAGGC AAGCCCAGCT GGAGTGGGAC GACTCCACCC TCCCCTACTA G |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_005201934.2 |
CDS | 106..2976 |
Translation | |
Target ORF information:
RefSeq Version | XM_005201877.4 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus calsyntenin 2 (CLSTN2), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_005201877.4 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821
| ATGCTGACTG GAAGGCTGTG CTGGGTGCCG CTCCTGCTGG CGCTGGGCGT GGGGAGCGGC AGCGGCGGCG GGGAGAGCGG GCGGCGCCGC CTCCTCGCGG CTAAAGTGAA CAAGCACAAA CCATGGATTG AGACTTCGTA TCATGGAGTC ATAACAGAGA ACAATGACAC AGTCATTTTG GACCCACCAT TGGTCGCCCT GGATAAAGAT GCACCAGTTC CTTTTGCAGG AGAAATCTGT GCATTCAAGA TACATGGCCA GGAGTTGCCC TTTGAGGCTG TGGTACTCAA CAAGACATCT GGAGAAGGCC GGCTCCGTGC CAAGAGCCCC ATTGACTGTG AGCTGCAGAA GGAGTACACG TTCATCATCC AGGCCTATGA CTGTGGCACG GGGCCCCGGG AGACAGCCTG GAAGAAATCT CACAAGGCCG TGGTCCATAT CCAGGTGAAG GACGTCAATG AGTTTGCTCC CACCTTCAAA GAGCCGGCCT ACAAGGCTAT CGTGACGGAG GGCAAGATCT ATGACAGCAT CCTGCAAGTG GAGGCCATCG ACGAAGACTG CTCCCCCCAG TACAGCCAGA TTTGCAACTA TGAAATCGTC ACAACTGATG TGCCTTTTGC CATCGACAGG AATGGCAACG TCAGAAACAC GGAGAAGCTG AGCTATGACA AGCAGCACCA GTATGAGATC CTGGTAACCG CCTATGACTG TGGACAGAAG CCCGCAGCCC AGGACACCCT GGTGCAGGTG GACGTGAAGC CAGTTTGCAA GCCTGGCTGG CAAGACTGGA CCAAGAGGAT TGAGTACCAG CCTGGCTCAG GGAGCGTGCC CCTGTTCCCC AGCATCCACC TGGAGACGTG CGATGGGGCC GTGTCCTCCA TCCAGATCAC CACGGAGCTG CAGACCAACT ACATTGGGAA GGGCTGTGAC CGGGAGACCT ACTCTGAGAA GTCCCTTCAG AAATTATGTG GAGCTTCCTC TGGCATCATT GACCTCTTGC CATCCCCCAG TGCTGCCACC AACTGGACCA TAGGACTGCT GGTGGATAGC AGTGAAATGA TCTTCAAGTT CGATGGCAGG CAGGGTGCCA AGATCCCTGA TGGAGTTGTG CCCAAGAACC TGACCGACCA GTTCACCATC ACCATGTGGA TGAAGCATGG CCCCAGCCCT GGCGTGAGAG CTGAGAAGGA AACCATCCTC TGCAACTCAG ATAAAACCGA AATGAACCGG CATCACTACG CCCTGTATGT GCACAACTGC CGCCTCGTCT TCCTCTTGCG CAAGGATTTT GACCAGGCAG ACACCTTCCG CCCAGCAGAG TTCCACTGGA AGCTGGACCA GATTTGTGAC AAAGAATGGC ATTACTATGT CATCAATGTG GAGTTTCCTG TGGTCACCTT ATACATGGAT GGAGCAACGT ATGAACCATA CCTGGTGACT AACGATTGGC CCATTCATCC ATCTCACATT GCCATGCAAC TGACAGTCGG CGCTTGTTGG CAAGGAGGAG AAGTCACCAA GCCACGATTT GCTCAATTCT TCCACGGCAG CCTGGCCAGT CTCACCATTC GCCCTGGCAA AATGGACAGT CAGAAGGTGA TTTCCTGCCT GCAGGCCTGC AAGGAAGGGC TGGATATCAA TTCCCTGGAA AGCCTGGGCC AAGGAATAAA GTATCATTTC AACCCCTCGC AGTCCGTCCT GGTAATGGAA GGTGATGACA TCGGGAATAT CAACCGTGCC CTCCAGAAGG TCTCCTACAT CAACTCCAGG CAGTTCCCAA CTGCGGGTGT GCGGCGCCTG AAAGTCTCTT CCAAAGTCCA GTGCTTTGGA GAAGATGTGT GTATCAGCAT CCCTGACATA GATGCCTACG TGATGGTGCT GCAGGCGGTC GAGCCCCAGA TCACCCTCCA TGGCACAGAC CGCTTCTGGA GACCCGCCGC CCAGTTTGAA AGTGCCAGAG GGGTGATTCT CTTCCCTGAC ATCAAGATTG TGAGCACCTT CACCAAAGCT GAGGCTCCCA GTGACTTGAA GACCACAGGT ACAGCCCCCA AATCAGCAGT TTTAGAAGAA ATGCTTCACA ACTTAGATTT CTGTGACATT TTAGTGCTGG GAGGGGACTT GGACCCCAGA CAGGAGTGCT TGGAGCTCAA CCACAGTGAG CTCCACCAGC GACACCTGGA CGCCACCAAC TCCACAGCAG GTTACTCCAT CTACGGTGTG GGCTCCATGA GCCGCTACGA GCAGGTGCTG CGTCACATCC GTTACCGCAA CTGGCATCCG GCTGCCCTGG AGTCCCGGCA CTTCAGGATC AAGTGCTCAG AACTCAACGG GCGCTACACC AGCAATGAGT TCAACCTGGA GGTCAGCGTC CTCCATGAGG TCAGAGTCCC GGACAGTGAG CACGTCAACC ACCTTATCGC GCAGCCACCA TTCCTCCAGT CCGTCCACCA CCCGGAGTCC CAGACTAGCA TCCAGCACAG TTCAGCGGTC CCAAGCATTG CCACAGTGGT CATCATCATC TCCGTGTGCA TGCTAGTGTT TGTCGTGGCC ATGGGCGTGT ACCGGGTCCG GATCGCCCAC CAGCACTTCA TCCAAGAGAC TGAGGCTGCC AAGGAAGCAG AGATGGACTG GGACGATTCT GCACTCACTA TCACGGTCAA CCCCATGGAG AAACACGGAG CCCCAGGGCG TGGGGAAGAG GAGACCGAGG AAGAGGAGGA GGAGGAAGCG GAGGAAGACA GCTCCAGCAG CAGCGAGTCC GAGGGCAGCG AAGAGGAGGA GGAGGAGGAA GGGGCGGGCA GGGGCAGACA CGGGCAGAGT GGAGCCAGGC AAGCCCAGCT GGAGTGGGAC GACTCCACCC TCCCCTACTA G |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa36961 |
Clone ID Related Accession (Same CDS sequence) |
NM_001206757.1
|
Accession Version |
NM_001206757.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 2868bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2017-10-22 |
Organism |
Bos taurus(cattle) |
Product |
calsyntenin-2 precursor |
Comment |
Comment: INFERRED REFSEQ: This record is predicted by genome sequence analysis and is not yet supported by experimental evidence. The reference sequence was derived from DAAA02002918.1, DAAA02002911.1, DAAA02002909.1 and DAAA02002907.1. On or before May 6, 2011 this sequence version replaced XM_002685044.1, XM_609483.4.
Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments.
##Evidence-Data-START##
RNAseq introns :: single sample supports all introns SAMN04019650 [ECO:0000348]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821
| ATGCTGACTG GAAGGCTGTG CTGGGTGCCG CTCCTGCTGG CGCTGGGCGT GGGGAGCGGC AGCGGCGGCG GGGAGAGCGG GCGGCGCCGC CTCCTCGCGG CTAAAGTGAA CAAGCACAAA CCATGGATTG AGACTTCGTA TCATGGAGTC ATAACAGAGA ACAATGACAC AGTCATTTTG GACCCACCAT TGGTCGCCCT GGATAAAGAT GCACCAGTTC CTTTTGCAGG AGAAATCTGT GCATTCAAGA TACATGGCCA GGAGTTGCCC TTTGAGGCTG TGGTACTCAA CAAGACATCT GGAGAAGGCC GGCTCCGTGC CAAGAGCCCC ATTGACTGTG AGCTGCAGAA GGAGTACACG TTCATCATCC AGGCCTATGA CTGTGGCACG GGGCCCCGGG AGACAGCCTG GAAGAAATCT CACAAGGCCG TGGTCCATAT CCAGGTGAAG GACGTCAATG AGTTTGCTCC CACCTTCAAA GAGCCGGCCT ACAAGGCTAT CGTGACGGAG GGCAAGATCT ATGACAGCAT CCTGCAAGTG GAGGCCATCG ACGAAGACTG CTCCCCCCAG TACAGCCAGA TTTGCAACTA TGAAATCGTC ACAACTGATG TGCCTTTTGC CATCGACAGG AATGGCAACG TCAGAAACAC GGAGAAGCTG AGCTATGACA AGCAGCACCA GTATGAGATC CTGGTAACCG CCTATGACTG TGGACAGAAG CCCGCAGCCC AGGACACCCT GGTGCAGGTG GACGTGAAGC CAGTTTGCAA GCCTGGCTGG CAAGACTGGA CCAAGAGGAT TGAGTACCAG CCTGGCTCAG GGAGCGTGCC CCTGTTCCCC AGCATCCACC TGGAGACGTG CGATGGGGCC GTGTCCTCCA TCCAGATCAC CACGGAGCTG CAGACCAACT ACATTGGGAA GGGCTGTGAC CGGGAGACCT ACTCTGAGAA GTCCCTTCAG AAATTATGTG GAGCTTCCTC TGGCATCATT GACCTCTTGC CATCCCCCAG TGCTGCCACC AACTGGACCA TAGGACTGCT GGTGGATAGC AGTGAAATGA TCTTCAAGTT CGATGGCAGG CAGGGTGCCA AGATCCCTGA TGGAGTTGTG CCCAAGAACC TGACCGACCA GTTCACCATC ACCATGTGGA TGAAGCATGG CCCCAGCCCT GGCGTGAGAG CTGAGAAGGA AACCATCCTC TGCAACTCAG ATAAAACCGA AATGAACCGG CATCACTACG CCCTGTATGT GCACAACTGC CGCCTCGTCT TCCTCTTGCG CAAGGATTTT GACCAGGCAG ACACCTTCCG CCCAGCAGAG TTCCACTGGA AGCTGGACCA GATTTGTGAC AAAGAATGGC ATTACTATGT CATCAATGTG GAGTTTCCTG TGGTCACCTT ATACATGGAT GGAGCAACGT ATGAACCATA CCTGGTGACT AACGATTGGC CCATTCATCC ATCTCACATT GCCATGCAAC TGACAGTCGG CGCTTGTTGG CAAGGAGGAG AAGTCACCAA GCCACGATTT GCTCAATTCT TCCACGGCAG CCTGGCCAGT CTCACCATTC GCCCTGGCAA AATGGACAGT CAGAAGGTGA TTTCCTGCCT GCAGGCCTGC AAGGAAGGGC TGGATATCAA TTCCCTGGAA AGCCTGGGCC AAGGAATAAA GTATCATTTC AACCCCTCGC AGTCCGTCCT GGTAATGGAA GGTGATGACA TCGGGAATAT CAACCGTGCC CTCCAGAAGG TCTCCTACAT CAACTCCAGG CAGTTCCCAA CTGCGGGTGT GCGGCGCCTG AAAGTCTCTT CCAAAGTCCA GTGCTTTGGA GAAGATGTGT GTATCAGCAT CCCCGACATA GATGCCTACG TGATGGTGCT GCAGGCGGTC GAGCCCCAGA TCACCCTCCA TGGCACAGAC CGCTTCTGGA GACCCGCCGC CCAGTTTGAA AGTGCCAGAG GGGTGATTCT CTTCCCTGAC ATCAAGATTG TGAGCACCTT CACCAAAGCT GAGGCTCCCA GTGACTTGAA GACCACAGCC CCCAAATCAG CAGTTTTAGA AGAAATGCTT CACAACTTAG ATTTCTGTGA CATTTTAGTG CTGGGAGGGG ACTTGGACCC CAGACAGGAG TGCTTGGAGC TCAACCACAG TGAGCTCCAC CAGCGACACC TGGACGCCAC CAACTCCACA GCAGGTTACT CCATCTACGG TGTGGGCTCC ATGAGCCGCT ACGAGCAGGT GCTGCGTCAC ATCCGTTACC GCAACTGGCA TCCGGCTGCC CTGGAGTCCC GGCACTTCAG GATCAAGTGC TCAGAACTCA ACGGGCGCTA CACCAGCAAT GAGTTCAACC TGGAGGTCAG CGTCCTCCAT GAGGTCAGAG TCCCGGACAG TGAGCACGTC AACCACCTTA TCGCGCAGCC ACCATTCCTC CAGTCCGTCC ACCACCCGGA GTCCCAGACT AGCATCCAGC ACAGTTCAGC GGTCCCAAGC ATTGCCACAG TGGTCATCAT CATCTCCGTG TGCATGCTAG TGTTTGTCGT GGCCATGGGC GTGTACCGGG TCCGGATCGC CCACCAGCAC TTCATCCAAG AGACTGAGGC TGCCAAGGAA GCAGAGATGG ACTGGGACGA TTCTGCACTC ACTATCACGG TCAACCCCAT GGAGAAACAC GGAGCCCCAG GGCGTGGGGA AGAGGAGACC GAGGAAGAGG AGGAGGAGGA AGCGGAGGAA GACAGCTCCA GCAGCAGCGA GTCCGAGGGC AGCGAAGAGG AGGAGGAGGA GGAGGAAGGG GCGGGCAGGG GCAGACACGG GCAGAGTGGA GCCAGGCAAG CCCAGCTGGA GTGGGACGAC TCCACCCTCC CCTACTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001193686.1 |
CDS | 1..2868 |
Translation | |
Target ORF information:
RefSeq Version | NM_001206757.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus calsyntenin 2 (CLSTN2), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001206757.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821
| ATGCTGACTG GAAGGCTGTG CTGGGTGCCG CTCCTGCTGG CGCTGGGCGT GGGGAGCGGC AGCGGCGGCG GGGAGAGCGG GCGGCGCCGC CTCCTCGCGG CTAAAGTGAA CAAGCACAAA CCATGGATTG AGACTTCGTA TCATGGAGTC ATAACAGAGA ACAATGACAC AGTCATTTTG GACCCACCAT TGGTCGCCCT GGATAAAGAT GCACCAGTTC CTTTTGCAGG AGAAATCTGT GCATTCAAGA TACATGGCCA GGAGTTGCCC TTTGAGGCTG TGGTACTCAA CAAGACATCT GGAGAAGGCC GGCTCCGTGC CAAGAGCCCC ATTGACTGTG AGCTGCAGAA GGAGTACACG TTCATCATCC AGGCCTATGA CTGTGGCACG GGGCCCCGGG AGACAGCCTG GAAGAAATCT CACAAGGCCG TGGTCCATAT CCAGGTGAAG GACGTCAATG AGTTTGCTCC CACCTTCAAA GAGCCGGCCT ACAAGGCTAT CGTGACGGAG GGCAAGATCT ATGACAGCAT CCTGCAAGTG GAGGCCATCG ACGAAGACTG CTCCCCCCAG TACAGCCAGA TTTGCAACTA TGAAATCGTC ACAACTGATG TGCCTTTTGC CATCGACAGG AATGGCAACG TCAGAAACAC GGAGAAGCTG AGCTATGACA AGCAGCACCA GTATGAGATC CTGGTAACCG CCTATGACTG TGGACAGAAG CCCGCAGCCC AGGACACCCT GGTGCAGGTG GACGTGAAGC CAGTTTGCAA GCCTGGCTGG CAAGACTGGA CCAAGAGGAT TGAGTACCAG CCTGGCTCAG GGAGCGTGCC CCTGTTCCCC AGCATCCACC TGGAGACGTG CGATGGGGCC GTGTCCTCCA TCCAGATCAC CACGGAGCTG CAGACCAACT ACATTGGGAA GGGCTGTGAC CGGGAGACCT ACTCTGAGAA GTCCCTTCAG AAATTATGTG GAGCTTCCTC TGGCATCATT GACCTCTTGC CATCCCCCAG TGCTGCCACC AACTGGACCA TAGGACTGCT GGTGGATAGC AGTGAAATGA TCTTCAAGTT CGATGGCAGG CAGGGTGCCA AGATCCCTGA TGGAGTTGTG CCCAAGAACC TGACCGACCA GTTCACCATC ACCATGTGGA TGAAGCATGG CCCCAGCCCT GGCGTGAGAG CTGAGAAGGA AACCATCCTC TGCAACTCAG ATAAAACCGA AATGAACCGG CATCACTACG CCCTGTATGT GCACAACTGC CGCCTCGTCT TCCTCTTGCG CAAGGATTTT GACCAGGCAG ACACCTTCCG CCCAGCAGAG TTCCACTGGA AGCTGGACCA GATTTGTGAC AAAGAATGGC ATTACTATGT CATCAATGTG GAGTTTCCTG TGGTCACCTT ATACATGGAT GGAGCAACGT ATGAACCATA CCTGGTGACT AACGATTGGC CCATTCATCC ATCTCACATT GCCATGCAAC TGACAGTCGG CGCTTGTTGG CAAGGAGGAG AAGTCACCAA GCCACGATTT GCTCAATTCT TCCACGGCAG CCTGGCCAGT CTCACCATTC GCCCTGGCAA AATGGACAGT CAGAAGGTGA TTTCCTGCCT GCAGGCCTGC AAGGAAGGGC TGGATATCAA TTCCCTGGAA AGCCTGGGCC AAGGAATAAA GTATCATTTC AACCCCTCGC AGTCCGTCCT GGTAATGGAA GGTGATGACA TCGGGAATAT CAACCGTGCC CTCCAGAAGG TCTCCTACAT CAACTCCAGG CAGTTCCCAA CTGCGGGTGT GCGGCGCCTG AAAGTCTCTT CCAAAGTCCA GTGCTTTGGA GAAGATGTGT GTATCAGCAT CCCCGACATA GATGCCTACG TGATGGTGCT GCAGGCGGTC GAGCCCCAGA TCACCCTCCA TGGCACAGAC CGCTTCTGGA GACCCGCCGC CCAGTTTGAA AGTGCCAGAG GGGTGATTCT CTTCCCTGAC ATCAAGATTG TGAGCACCTT CACCAAAGCT GAGGCTCCCA GTGACTTGAA GACCACAGCC CCCAAATCAG CAGTTTTAGA AGAAATGCTT CACAACTTAG ATTTCTGTGA CATTTTAGTG CTGGGAGGGG ACTTGGACCC CAGACAGGAG TGCTTGGAGC TCAACCACAG TGAGCTCCAC CAGCGACACC TGGACGCCAC CAACTCCACA GCAGGTTACT CCATCTACGG TGTGGGCTCC ATGAGCCGCT ACGAGCAGGT GCTGCGTCAC ATCCGTTACC GCAACTGGCA TCCGGCTGCC CTGGAGTCCC GGCACTTCAG GATCAAGTGC TCAGAACTCA ACGGGCGCTA CACCAGCAAT GAGTTCAACC TGGAGGTCAG CGTCCTCCAT GAGGTCAGAG TCCCGGACAG TGAGCACGTC AACCACCTTA TCGCGCAGCC ACCATTCCTC CAGTCCGTCC ACCACCCGGA GTCCCAGACT AGCATCCAGC ACAGTTCAGC GGTCCCAAGC ATTGCCACAG TGGTCATCAT CATCTCCGTG TGCATGCTAG TGTTTGTCGT GGCCATGGGC GTGTACCGGG TCCGGATCGC CCACCAGCAC TTCATCCAAG AGACTGAGGC TGCCAAGGAA GCAGAGATGG ACTGGGACGA TTCTGCACTC ACTATCACGG TCAACCCCAT GGAGAAACAC GGAGCCCCAG GGCGTGGGGA AGAGGAGACC GAGGAAGAGG AGGAGGAGGA AGCGGAGGAA GACAGCTCCA GCAGCAGCGA GTCCGAGGGC AGCGAAGAGG AGGAGGAGGA GGAGGAAGGG GCGGGCAGGG GCAGACACGG GCAGAGTGGA GCCAGGCAAG CCCAGCTGGA GTGGGACGAC TCCACCCTCC CCTACTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa16002 |
Clone ID Related Accession (Same CDS sequence) |
XM_005201877.3
|
Accession Version |
XM_005201877.3 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 2874bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-01-25 |
Organism |
Bos taurus(cattle) |
Product |
calsyntenin-2 isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003103820.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jan 26, 2016 this sequence version replaced XM_005201877.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Bos taurus Annotation Release 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 6.5
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821
| ATGCTGACTG GAAGGCTGTG CTGGGTGCCG CTCCTGCTGG CGCTGGGCGT GGGGAGCGGC AGCGGCGGCG GGGAGAGCGG GCGGCGCCGC CTCCTCGCGG CTAAAGTGAA CAAGCACAAA CCATGGATTG AGACTTCGTA TCATGGAGTC ATAACAGAGA ACAATGACAC AGTCATTTTG GACCCACCAT TGGTCGCCCT GGATAAAGAT GCACCAGTTC CTTTTGCAGG AGAAATCTGT GCATTCAAGA TACATGGCCA GGAGTTGCCC TTTGAGGCTG TGGTACTCAA CAAGACATCT GGAGAAGGCC GGCTCCGTGC CAAGAGCCCC ATTGACTGTG AGCTGCAGAA GGAGTACACG TTCATCATCC AGGCCTATGA CTGTGGCACG GGGCCCCGGG AGACAGCCTG GAAGAAATCT CACAAGGCCG TGGTCCATAT CCAGGTGAAG GACGTCAATG AGTTTGCTCC CACCTTCAAA GAGCCGGCCT ACAAGGCTAT CGTGACGGAG GGCAAGATCT ATGACAGCAT CCTGCAAGTG GAGGCCATCG ACGAAGACTG CTCCCCCCAG TACAGCCAGA TTTGCAACTA TGAAATCGTC ACAACTGATG TGCCTTTTGC CATCGACAGG AATGGCAACG TCAGAAACAC GGAGAAGCTG AGCTATGACA AGCAGCACCA GTATGAGATC CTGGTAACCG CCTATGACTG TGGACAGAAG CCCGCAGCCC AGGACACCCT GGTGCAGGTG GACGTGAAGC CAGTTTGCAA GCCTGGCTGG CAAGACTGGA CCAAGAGGAT TGAGTACCAG CCTGGCTCAG GGAGCGTGCC CCTGTTCCCC AGCATCCACC TGGAGACGTG CGATGGGGCC GTGTCCTCCA TCCAGATCAC CACGGAGCTG CAGACCAACT ACATTGGGAA GGGCTGTGAC CGGGAGACCT ACTCTGAGAA GTCCCTTCAG AAATTATGTG GAGCTTCCTC TGGCATCATT GACCTCTTGC CATCCCCCAG TGCTGCCACC AACTGGACCA TAGGACTGCT GGTGGATAGC AGTGAAATGA TCTTCAAGTT CGATGGCAGG CAGGGTGCCA AGATCCCTGA TGGAGTTGTG CCCAAGAACC TGACCGACCA GTTCACCATC ACCATGTGGA TGAAGCATGG CCCCAGCCCT GGCGTGAGAG CTGAGAAGGA AACCATCCTC TGCAACTCAG ATAAAACCGA AATGAACCGG CATCACTACG CCCTGTATGT GCACAACTGC CGCCTCGTCT TCCTCTTGCG CAAGGATTTT GACCAGGCAG ACACCTTCCG CCCAGCAGAG TTCCACTGGA AGCTGGACCA GATTTGTGAC AAAGAATGGC ATTACTATGT CATCAATGTG GAGTTTCCTG TGGTCACCTT ATACATGGAT GGAGCAACGT ATGAACCATA CCTGGTGACT AACGATTGGC CCATTCATCC ATCTCACATT GCCATGCAAC TGACAGTCGG CGCTTGTTGG CAAGGAGGAG AAGTCACCAA GCCACGATTT GCTCAATTCT TCCACGGCAG CCTGGCCAGT CTCACCATTC GCCCTGGCAA AATGGACAGT CAGAAGGTGA TTTCCTGCCT GCAGGCCTGC AAGGAAGGGC TGGATATCAA TTCCCTGGAA AGCCTGGGCC AAGGAATAAA GTATCATTTC AACCCCTCGC AGTCCGTCCT GGTAATGGAA GGTGATGACA TCGGGAATAT CAACCGTGCC CTCCAGAAGG TCTCCTACAT CAACTCCAGG CAGTTCCCAA CTGCGGGTGT GCGGCGCCTG AAAGTCTCTT CCAAAGTCCA GTGCTTTGGA GAAGATGTGT GTATCAGCAT CCCCGACATA GATGCCTACG TGATGGTGCT GCAGGCGGTC GAGCCCCAGA TCACCCTCCA TGGCACAGAC CGCTTCTGGA GACCCGCCGC CCAGTTTGAA AGTGCCAGAG GGGTGATTCT CTTCCCTGAC ATCAAGATTG TGAGCACCTT CACCAAAGCT GAGGCTCCCA GTGACTTGAA GACCACAGGT ACAGCCCCCA AATCAGCAGT TTTAGAAGAA ATGCTTCACA ACTTAGATTT CTGTGACATT TTAGTGCTGG GAGGGGACTT GGACCCCAGA CAGGAGTGCT TGGAGCTCAA CCACAGTGAG CTCCACCAGC GACACCTGGA CGCCACCAAC TCCACAGCAG GTTACTCCAT CTACGGTGTG GGCTCCATGA GCCGCTACGA GCAGGTGCTG CGTCACATCC GTTACCGCAA CTGGCATCCG GCTGCCCTGG AGTCCCGGCA CTTCAGGATC AAGTGCTCAG AACTCAACGG GCGCTACACC AGCAATGAGT TCAACCTGGA GGTCAGCGTC CTCCATGAGG TCAGAGTCCC GGACAGTGAG CACGTCAACC ACCTTATCGC GCAGCCACCA TTCCTCCAGT CCGTCCACCA CCCGGAGTCC CAGACTAGCA TCCAGCACAG TTCAGCGGTC CCAAGCATTG CCACAGTGGT CATCATCATC TCCGTGTGCA TGCTAGTGTT TGTCGTGGCC ATGGGCGTGT ACCGGGTCCG GATCGCCCAC CAGCACTTCA TCCAAGAGAC TGAGGCTGCC AAGGAAGCAG AGATGGACTG GGACGATTCT GCACTCACTA TCACGGTCAA CCCCATGGAG AAACACGGAG CCCCAGGGCG TGGGGAAGAG GAGACCGAGG AAGAGGAGGA GGAGGAAGCG GAGGAAGACA GCTCCAGCAG CAGCGAGTCC GAGGGCAGCG AAGAGGAGGA GGAGGAGGAG GAAGGGGCGG GCAGGGGCAG ACACGGGCAG AGTGGAGCCA GGCAAGCCCA GCTGGAGTGG GACGACTCCA CCCTCCCCTA CTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_005201934.1 |
CDS | 1920..4793 |
Translation | |
Target ORF information:
RefSeq Version | XM_005201877.3 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus calsyntenin 2 (CLSTN2), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_005201877.3 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821
| ATGCTGACTG GAAGGCTGTG CTGGGTGCCG CTCCTGCTGG CGCTGGGCGT GGGGAGCGGC AGCGGCGGCG GGGAGAGCGG GCGGCGCCGC CTCCTCGCGG CTAAAGTGAA CAAGCACAAA CCATGGATTG AGACTTCGTA TCATGGAGTC ATAACAGAGA ACAATGACAC AGTCATTTTG GACCCACCAT TGGTCGCCCT GGATAAAGAT GCACCAGTTC CTTTTGCAGG AGAAATCTGT GCATTCAAGA TACATGGCCA GGAGTTGCCC TTTGAGGCTG TGGTACTCAA CAAGACATCT GGAGAAGGCC GGCTCCGTGC CAAGAGCCCC ATTGACTGTG AGCTGCAGAA GGAGTACACG TTCATCATCC AGGCCTATGA CTGTGGCACG GGGCCCCGGG AGACAGCCTG GAAGAAATCT CACAAGGCCG TGGTCCATAT CCAGGTGAAG GACGTCAATG AGTTTGCTCC CACCTTCAAA GAGCCGGCCT ACAAGGCTAT CGTGACGGAG GGCAAGATCT ATGACAGCAT CCTGCAAGTG GAGGCCATCG ACGAAGACTG CTCCCCCCAG TACAGCCAGA TTTGCAACTA TGAAATCGTC ACAACTGATG TGCCTTTTGC CATCGACAGG AATGGCAACG TCAGAAACAC GGAGAAGCTG AGCTATGACA AGCAGCACCA GTATGAGATC CTGGTAACCG CCTATGACTG TGGACAGAAG CCCGCAGCCC AGGACACCCT GGTGCAGGTG GACGTGAAGC CAGTTTGCAA GCCTGGCTGG CAAGACTGGA CCAAGAGGAT TGAGTACCAG CCTGGCTCAG GGAGCGTGCC CCTGTTCCCC AGCATCCACC TGGAGACGTG CGATGGGGCC GTGTCCTCCA TCCAGATCAC CACGGAGCTG CAGACCAACT ACATTGGGAA GGGCTGTGAC CGGGAGACCT ACTCTGAGAA GTCCCTTCAG AAATTATGTG GAGCTTCCTC TGGCATCATT GACCTCTTGC CATCCCCCAG TGCTGCCACC AACTGGACCA TAGGACTGCT GGTGGATAGC AGTGAAATGA TCTTCAAGTT CGATGGCAGG CAGGGTGCCA AGATCCCTGA TGGAGTTGTG CCCAAGAACC TGACCGACCA GTTCACCATC ACCATGTGGA TGAAGCATGG CCCCAGCCCT GGCGTGAGAG CTGAGAAGGA AACCATCCTC TGCAACTCAG ATAAAACCGA AATGAACCGG CATCACTACG CCCTGTATGT GCACAACTGC CGCCTCGTCT TCCTCTTGCG CAAGGATTTT GACCAGGCAG ACACCTTCCG CCCAGCAGAG TTCCACTGGA AGCTGGACCA GATTTGTGAC AAAGAATGGC ATTACTATGT CATCAATGTG GAGTTTCCTG TGGTCACCTT ATACATGGAT GGAGCAACGT ATGAACCATA CCTGGTGACT AACGATTGGC CCATTCATCC ATCTCACATT GCCATGCAAC TGACAGTCGG CGCTTGTTGG CAAGGAGGAG AAGTCACCAA GCCACGATTT GCTCAATTCT TCCACGGCAG CCTGGCCAGT CTCACCATTC GCCCTGGCAA AATGGACAGT CAGAAGGTGA TTTCCTGCCT GCAGGCCTGC AAGGAAGGGC TGGATATCAA TTCCCTGGAA AGCCTGGGCC AAGGAATAAA GTATCATTTC AACCCCTCGC AGTCCGTCCT GGTAATGGAA GGTGATGACA TCGGGAATAT CAACCGTGCC CTCCAGAAGG TCTCCTACAT CAACTCCAGG CAGTTCCCAA CTGCGGGTGT GCGGCGCCTG AAAGTCTCTT CCAAAGTCCA GTGCTTTGGA GAAGATGTGT GTATCAGCAT CCCCGACATA GATGCCTACG TGATGGTGCT GCAGGCGGTC GAGCCCCAGA TCACCCTCCA TGGCACAGAC CGCTTCTGGA GACCCGCCGC CCAGTTTGAA AGTGCCAGAG GGGTGATTCT CTTCCCTGAC ATCAAGATTG TGAGCACCTT CACCAAAGCT GAGGCTCCCA GTGACTTGAA GACCACAGGT ACAGCCCCCA AATCAGCAGT TTTAGAAGAA ATGCTTCACA ACTTAGATTT CTGTGACATT TTAGTGCTGG GAGGGGACTT GGACCCCAGA CAGGAGTGCT TGGAGCTCAA CCACAGTGAG CTCCACCAGC GACACCTGGA CGCCACCAAC TCCACAGCAG GTTACTCCAT CTACGGTGTG GGCTCCATGA GCCGCTACGA GCAGGTGCTG CGTCACATCC GTTACCGCAA CTGGCATCCG GCTGCCCTGG AGTCCCGGCA CTTCAGGATC AAGTGCTCAG AACTCAACGG GCGCTACACC AGCAATGAGT TCAACCTGGA GGTCAGCGTC CTCCATGAGG TCAGAGTCCC GGACAGTGAG CACGTCAACC ACCTTATCGC GCAGCCACCA TTCCTCCAGT CCGTCCACCA CCCGGAGTCC CAGACTAGCA TCCAGCACAG TTCAGCGGTC CCAAGCATTG CCACAGTGGT CATCATCATC TCCGTGTGCA TGCTAGTGTT TGTCGTGGCC ATGGGCGTGT ACCGGGTCCG GATCGCCCAC CAGCACTTCA TCCAAGAGAC TGAGGCTGCC AAGGAAGCAG AGATGGACTG GGACGATTCT GCACTCACTA TCACGGTCAA CCCCATGGAG AAACACGGAG CCCCAGGGCG TGGGGAAGAG GAGACCGAGG AAGAGGAGGA GGAGGAAGCG GAGGAAGACA GCTCCAGCAG CAGCGAGTCC GAGGGCAGCG AAGAGGAGGA GGAGGAGGAG GAAGGGGCGG GCAGGGGCAG ACACGGGCAG AGTGGAGCCA GGCAAGCCCA GCTGGAGTGG GACGACTCCA CCCTCCCCTA CTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
A whole-genome assembly of the domestic cow, Bos taurus.
Genome biology10(4)R42(2009)
Zimin AV,Delcher AL,Florea L,Kelley DR,Schatz MC,Puiu D,Hanrahan F,Pertea G,Van Tassell CP,Sonstegard TS,Mar?ais G,Roberts M,Subramanian P,Yorke JA,Salzberg SL |