Gene Symbol |
NGEF |
Entrez Gene ID |
540756 |
Full Name |
neuronal guanine nucleotide exchange factor |
General protein information |
- Preferred Names
neuronal guanine nucleotide exchange factor
Names
ephexin-1
|
Gene Type |
protein-coding |
Organism |
Bos taurus(cattle) |
Canis lupus familiaris (dog) |
NGEF |
XP_005635921.1 |
Danio rerio (zebrafish) |
LOC569090 |
XP_697546.3 |
Xenopus tropicalis (tropical clawed frog) |
ngef |
XP_004917852.1 |
Bos taurus (cattle) |
NGEF |
NP_001070394.1 |
Rattus norvegicus (Norway rat) |
Ngef |
NP_001129713.1 |
Pan troglodytes (chimpanzee) |
NGEF |
XP_516157.3 |
Homo sapiens (human) |
NGEF |
NP_062824.2 |
|
LOC713917 |
XP_001114604.1 |
Mus musculus (house mouse) |
Ngef |
NP_001104784.1 |
Gallus gallus (chicken) |
NGEF |
NP_001010841.1 |
Anopheles gambiae (African malaria mosquito) |
AgaP_AGAP007452 |
XP_308411.4 |
Related articles in PubMed
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following NGEF gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the NGEF cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
OBa40304 |
Clone ID Related Accession (Same CDS sequence) |
NM_001076926.1
|
Accession Version |
NM_001076926.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1851bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-13 |
Organism |
Bos taurus(cattle) |
Product |
ephexin-1 |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC123858.1. On Oct 11, 2006 this sequence version replaced XM_612979.2.
##Evidence-Data-START##
Transcript exon combination :: BC123858.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support SAMN03145412, SAMN03145413 [ECO:0000350]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801
| ATGGAGCTGC TGGCCGCAGC CTTCAACGCC GCCTGCGCCG TGGACCACGA CAGCTCCACC TCGGAGAGCG ACGCGCGCGA CTCAGCGGCG GGACACCTGC CCGGCAGCGA GTCGTCCTCT ACCCCAGGAA ATGGGGCTAC GCCCGAGGAG TTCCCGGCCC TCGCAGACAG CCCCACCACG CTCACCGAGG CCTTGCAGAT GATCCACCCT ATTCCCGCCG ACTCCTGGAG AAACCTCATT GAACAAATAG GGCTCCTGTA TCAGGAATAC CGAGATAAAT CAACTCTCCA AGAGATTGAG ACCAGGAGGC AACAGGATGC AGAAATACAA GGTGCTGCTG ACGGGTGCCC ATCCAGCGAG GAGGCTCCAG AGGAAGATGA AGGGGAGGAG GAGGAACCAG CAAGCCCACC TGAGAGGAAG GCCCTGCCCC AGATCTGCCT GCTCAGCAAC CCCCACTCGA GATTCAACCT CTGGCAGGAT CTCCCGGAGA TTCAGAGCAG CGGGGTGCTG GACATCCTCC AGCCGGAGGA GATCAGGCTG CAAGAGGCCA TGTTCGAGCT CATCACTTCT GAGGCCTCCT ACTATAAAAG CCTGAACCTT CTGGTGTCCC ACTTCATGGA GAACGAGCGG CTGAAGAAGA TCCTGCACCC GTCTGAGGCC CACATCCTCT TCTCCAACGT GCTGGATGTC ATGGCCGTCA GTGAGCGGTT TCTGTTGGAG CTGGAGCGCC GGATGGAGGA AAACATCGTC ATCTCGGACG TGTGTGACAT CGTGTACCGC TACGCCGCTG ACCACTTCTC CGTCTACATC ACCTACGTCA GCAACCAGAC CTACCAGGAG CGGACCTATA AGCAGCTGCT CCAGGAGAAG GCAGCCTTCC GGGAGCTGAT CGCGCAGCTG GAGTTGGACC CCAAGTGCAG GGGGCTGCCC CTCTCCTCCT TCCTCATCCT GCCTTTCCAG AGGATCACGC GCCTCAAGCT GTTGGTCCAG AACATCCTGA AGAGGGTGGA GGAAAGGTCT GAGCGCGAAG GCACCGCCTT GGACGCCCAC AAGGAACTGG AGCTGGTGGT GAAAGCATGC AACGAGGGCG TCAGGAAGAT GAGCCGCACG GAGCAGATGA TCAGCATCCA GAAGAAGATG GAGTTCAAGA TCAAGTCGGT GCCCATCATC TCACACTCCC GCTGGCTGCT GAAGCAGGGC GAGCTGCAGC AGATGTCCGG CCCCAAGACC TCGCGGACCC TGCGGACCAA GAAACTCTTC CGGGAGATTT ACCTCTTTCT CTTCAACGAC CTGCTGGTGA TTTGCCGGCA GATTCCAGGA GACAAGTACC AGGTGTTTGA CTCGGCCCCG CGAGGCCTGC TGCGCGCGGA GGAACTGGAG GACCAGGGCC AGACGCTGGC CAACGTCTTC ATCCTACGGC TGCTCGAGAA CTCAGACGAT CGGGAGGCCA CTTACATGCT GAAGGCGTCC TCTCAGAGCG AGATGAAGCG CTGGATGACC TCGCTGGCCC CCAACCGAAG AACTAAGTTC GTTTCCTTCA CGTCCCGGCT GCTCGACTGC CCCCAGGTCC AGTGTGTGCA CCCGTATGTG GCCCAGCAGC CGGATGAGCT GACGCTGGAG CTGGCCGACA TCCTCAACAT CCTGGACAAG ACAGAGGACG GCTGGATCTT TGGCGAGCGT CTGCATGACC AGGAGCGAGG CTGGTTCCCC AGCAATATGA CCGAGGAGAT CTTGAACCCC AAGATCCGGT CCCAGAACCT CAAGGAGTGT TTCCGTGTCC ACAAGATGGA CGACCCTCAG CGCAGCCAGA ATAAGGACCG CAGGAAGCTG GGCAGCCGGA ATCGGCAATG A |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001070394.1 |
CDS | 125..1975 |
Translation | |
Target ORF information:
RefSeq Version | NM_001076926.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus neuronal guanine nucleotide exchange factor (NGEF), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001076926.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801
| ATGGAGCTGC TGGCCGCAGC CTTCAACGCC GCCTGCGCCG TGGACCACGA CAGCTCCACC TCGGAGAGCG ACGCGCGCGA CTCAGCGGCG GGACACCTGC CCGGCAGCGA GTCGTCCTCT ACCCCAGGAA ATGGGGCTAC GCCCGAGGAG TTCCCGGCCC TCGCAGACAG CCCCACCACG CTCACCGAGG CCTTGCAGAT GATCCACCCT ATTCCCGCCG ACTCCTGGAG AAACCTCATT GAACAAATAG GGCTCCTGTA TCAGGAATAC CGAGATAAAT CAACTCTCCA AGAGATTGAG ACCAGGAGGC AACAGGATGC AGAAATACAA GGTGCTGCTG ACGGGTGCCC ATCCAGCGAG GAGGCTCCAG AGGAAGATGA AGGGGAGGAG GAGGAACCAG CAAGCCCACC TGAGAGGAAG GCCCTGCCCC AGATCTGCCT GCTCAGCAAC CCCCACTCGA GATTCAACCT CTGGCAGGAT CTCCCGGAGA TTCAGAGCAG CGGGGTGCTG GACATCCTCC AGCCGGAGGA GATCAGGCTG CAAGAGGCCA TGTTCGAGCT CATCACTTCT GAGGCCTCCT ACTATAAAAG CCTGAACCTT CTGGTGTCCC ACTTCATGGA GAACGAGCGG CTGAAGAAGA TCCTGCACCC GTCTGAGGCC CACATCCTCT TCTCCAACGT GCTGGATGTC ATGGCCGTCA GTGAGCGGTT TCTGTTGGAG CTGGAGCGCC GGATGGAGGA AAACATCGTC ATCTCGGACG TGTGTGACAT CGTGTACCGC TACGCCGCTG ACCACTTCTC CGTCTACATC ACCTACGTCA GCAACCAGAC CTACCAGGAG CGGACCTATA AGCAGCTGCT CCAGGAGAAG GCAGCCTTCC GGGAGCTGAT CGCGCAGCTG GAGTTGGACC CCAAGTGCAG GGGGCTGCCC CTCTCCTCCT TCCTCATCCT GCCTTTCCAG AGGATCACGC GCCTCAAGCT GTTGGTCCAG AACATCCTGA AGAGGGTGGA GGAAAGGTCT GAGCGCGAAG GCACCGCCTT GGACGCCCAC AAGGAACTGG AGCTGGTGGT GAAAGCATGC AACGAGGGCG TCAGGAAGAT GAGCCGCACG GAGCAGATGA TCAGCATCCA GAAGAAGATG GAGTTCAAGA TCAAGTCGGT GCCCATCATC TCACACTCCC GCTGGCTGCT GAAGCAGGGC GAGCTGCAGC AGATGTCCGG CCCCAAGACC TCGCGGACCC TGCGGACCAA GAAACTCTTC CGGGAGATTT ACCTCTTTCT CTTCAACGAC CTGCTGGTGA TTTGCCGGCA GATTCCAGGA GACAAGTACC AGGTGTTTGA CTCGGCCCCG CGAGGCCTGC TGCGCGCGGA GGAACTGGAG GACCAGGGCC AGACGCTGGC CAACGTCTTC ATCCTACGGC TGCTCGAGAA CTCAGACGAT CGGGAGGCCA CTTACATGCT GAAGGCGTCC TCTCAGAGCG AGATGAAGCG CTGGATGACC TCGCTGGCCC CCAACCGAAG AACTAAGTTC GTTTCCTTCA CGTCCCGGCT GCTCGACTGC CCCCAGGTCC AGTGTGTGCA CCCGTATGTG GCCCAGCAGC CGGATGAGCT GACGCTGGAG CTGGCCGACA TCCTCAACAT CCTGGACAAG ACAGAGGACG GCTGGATCTT TGGCGAGCGT CTGCATGACC AGGAGCGAGG CTGGTTCCCC AGCAATATGA CCGAGGAGAT CTTGAACCCC AAGATCCGGT CCCAGAACCT CAAGGAGTGT TTCCGTGTCC ACAAGATGGA CGACCCTCAG CGCAGCCAGA ATAAGGACCG CAGGAAGCTG GGCAGCCGGA ATCGGCAATG A |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa232949 |
Clone ID Related Accession (Same CDS sequence) |
XM_024989649.1
, XM_024989652.1
, XM_024989651.1
|
Accession Version |
XM_024989649.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 2004bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
ephexin-1 isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037330.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981
| ATGCCCCATA CCGACCAGGA GGCACAAGAC AAAGCATCCC ATACCAAGCC AATCCAGAGA AACTCCACCT TCAATCGCGC CGTGAGACTC AGAAGCAGAG GCAAAGCCAG AGGCACTTCT GAGGGGAACC CCGGCTACCC AGCAGATCCA CTGGAAAATG AGAACTCTGT CAATGAACCC CTGACCTTGA ATTTGCCGCA GAGCAGAAAG CACCTCTGGA GGATACCAAT CCAGACAGAC CCAGGAGCCG AGAGAACAAG CGAGTCGTCC TCTACCCCAG GAAATGGGGC TACGCCCGAG GAGTTCCCGG CCCTCGCAGA CAGCCCCACC ACGCTCACCG AGGCCTTGCA GATGATCCAC CCTATTCCCG CCGACTCCTG GAGAAACCTC ATTGAACAAA TAGGGCTCCT GTATCAGGAA TACCGAGATA AATCAACTCT CCAAGAGATT GAGACCAGGA GGCAACAGGA TGCAGAAATA CAAGGTGCTG CTGACGGGTG CCCATCCAGC GAGGAGGCTC CAGAGGAAGA TGAAGGGGAG GAGGAGGAAC CAGCAAGCCC ACCTGAGAGG AAGGCCCTGC CCCAGATCTG CCTGCTCAGC AACCCCCACT CGAGATTCAA CCTCTGGCAG GATCTCCCGG AGATTCAGAG CAGCGGGGTG CTGGACATCC TCCAGCCGGA GGAGATCAGG CTGCAAGAGG CCATGTTCGA GCTCATCACT TCTGAGGCCT CCTACTATAA AAGCCTGAAC CTTCTGGTGT CCCACTTCAT GGAGAACGAG CGGCTGAAGA AGATCCTGCA CCCGTCTGAG GCCCACATCC TCTTCTCCAA CGTGCTGGAT GTCATGGCCG TCAGTGAGCG GTTTCTGTTG GAGCTGGAGC GCCGGATGGA GGAAAACATC GTCATCTCGG ACGTGTGTGA CATCGTGTAC CGCTACGCCG CTGACCACTT CTCCGTCTAC ATCACCTACG TCAGCAACCA GACCTACCAG GAGCGGACCT ATAAGCAGCT GCTCCAGGAG AAGGCAGCCT TCCGGGAGCT GATCGCGCAG CTGGAGTTGG ACCCCAAGTG CAGGGGGCTG CCCCTCTCCT CCTTCCTCAT CCTGCCTTTC CAGAGGATCA CGCGCCTCAA GCTGTTGGTC CAGAACATCC TGAAGAGGGT GGAGGAAAGG TCTGAGCGCG AAGGCACCGC CTTGGACGCC CACAAGGAAC TGGAGCTGGT GGTGAAAGCA TGCAACGAGG GCGTCAGGAA GATGAGCCGC ACGGAGCAGA TGATCAGCAT CCAGAAGAAG ATGGAGTTCA AGATCAAGTC GGTGCCCATC ATCTCACACT CCCGCTGGCT GCTGAAGCAG GGCGAGCTGC AGCAGATGTC CGGCCCCAAG ACCTCGCGGA CCCTGCGGAC CAAGAAACTC TTCCGGGAGA TTTACCTCTT TCTCTTCAAC GACCTGCTGG TGATTTGCCG GCAGATTCCA GGAGACAAGT ACCAGGTGTT TGACTCGGCC CCGCGAGGCC TGCTGCGCGC GGAGGAACTG GAGGACCAGG GCCAGACGCT GGCCAACGTC TTCATCCTAC GGCTGCTCGA GAACTCAGAC GATCGGGAGG CCACTTACAT GCTGAAGGCG TCCTCTCAGA GCGAGATGAA GCGCTGGATG ACCTCGCTGG CCCCCAACCG AAGAACTAAG TTCGTTTCCT TCACGTCCCG GCTGCTCGAC TGCCCCCAGG TCCAGTGTGT GCACCCGTAT GTGGCCCAGC AGCCGGATGA GCTGACGCTG GAGCTGGCCG ACATCCTCAA CATCCTGGAC AAGACAGAGG ACGGCTGGAT CTTTGGCGAG CGTCTGCATG ACCAGGAGCG AGGCTGGTTC CCCAGCAATA TGACCGAGGA GATCTTGAAC CCCAAGATCC GGTCCCAGAA CCTCAAGGAG TGTTTCCGTG TCCACAAGAT GGACGACCCT CAGCGCAGCC AGAATAAGGA CCGCAGGAAG CTGGGCAGCC GGAATCGGCA ATGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_024845417.1 |
CDS | 493..2496 |
Translation | |
Target ORF information:
RefSeq Version | XM_024989649.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus neuronal guanine nucleotide exchange factor (NGEF), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_024989649.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981
| ATGCCCCATA CCGACCAGGA GGCACAAGAC AAAGCATCCC ATACCAAGCC AATCCAGAGA AACTCCACCT TCAATCGCGC CGTGAGACTC AGAAGCAGAG GCAAAGCCAG AGGCACTTCT GAGGGGAACC CCGGCTACCC AGCAGATCCA CTGGAAAATG AGAACTCTGT CAATGAACCC CTGACCTTGA ATTTGCCGCA GAGCAGAAAG CACCTCTGGA GGATACCAAT CCAGACAGAC CCAGGAGCCG AGAGAACAAG CGAGTCGTCC TCTACCCCAG GAAATGGGGC TACGCCCGAG GAGTTCCCGG CCCTCGCAGA CAGCCCCACC ACGCTCACCG AGGCCTTGCA GATGATCCAC CCTATTCCCG CCGACTCCTG GAGAAACCTC ATTGAACAAA TAGGGCTCCT GTATCAGGAA TACCGAGATA AATCAACTCT CCAAGAGATT GAGACCAGGA GGCAACAGGA TGCAGAAATA CAAGGTGCTG CTGACGGGTG CCCATCCAGC GAGGAGGCTC CAGAGGAAGA TGAAGGGGAG GAGGAGGAAC CAGCAAGCCC ACCTGAGAGG AAGGCCCTGC CCCAGATCTG CCTGCTCAGC AACCCCCACT CGAGATTCAA CCTCTGGCAG GATCTCCCGG AGATTCAGAG CAGCGGGGTG CTGGACATCC TCCAGCCGGA GGAGATCAGG CTGCAAGAGG CCATGTTCGA GCTCATCACT TCTGAGGCCT CCTACTATAA AAGCCTGAAC CTTCTGGTGT CCCACTTCAT GGAGAACGAG CGGCTGAAGA AGATCCTGCA CCCGTCTGAG GCCCACATCC TCTTCTCCAA CGTGCTGGAT GTCATGGCCG TCAGTGAGCG GTTTCTGTTG GAGCTGGAGC GCCGGATGGA GGAAAACATC GTCATCTCGG ACGTGTGTGA CATCGTGTAC CGCTACGCCG CTGACCACTT CTCCGTCTAC ATCACCTACG TCAGCAACCA GACCTACCAG GAGCGGACCT ATAAGCAGCT GCTCCAGGAG AAGGCAGCCT TCCGGGAGCT GATCGCGCAG CTGGAGTTGG ACCCCAAGTG CAGGGGGCTG CCCCTCTCCT CCTTCCTCAT CCTGCCTTTC CAGAGGATCA CGCGCCTCAA GCTGTTGGTC CAGAACATCC TGAAGAGGGT GGAGGAAAGG TCTGAGCGCG AAGGCACCGC CTTGGACGCC CACAAGGAAC TGGAGCTGGT GGTGAAAGCA TGCAACGAGG GCGTCAGGAA GATGAGCCGC ACGGAGCAGA TGATCAGCAT CCAGAAGAAG ATGGAGTTCA AGATCAAGTC GGTGCCCATC ATCTCACACT CCCGCTGGCT GCTGAAGCAG GGCGAGCTGC AGCAGATGTC CGGCCCCAAG ACCTCGCGGA CCCTGCGGAC CAAGAAACTC TTCCGGGAGA TTTACCTCTT TCTCTTCAAC GACCTGCTGG TGATTTGCCG GCAGATTCCA GGAGACAAGT ACCAGGTGTT TGACTCGGCC CCGCGAGGCC TGCTGCGCGC GGAGGAACTG GAGGACCAGG GCCAGACGCT GGCCAACGTC TTCATCCTAC GGCTGCTCGA GAACTCAGAC GATCGGGAGG CCACTTACAT GCTGAAGGCG TCCTCTCAGA GCGAGATGAA GCGCTGGATG ACCTCGCTGG CCCCCAACCG AAGAACTAAG TTCGTTTCCT TCACGTCCCG GCTGCTCGAC TGCCCCCAGG TCCAGTGTGT GCACCCGTAT GTGGCCCAGC AGCCGGATGA GCTGACGCTG GAGCTGGCCG ACATCCTCAA CATCCTGGAC AAGACAGAGG ACGGCTGGAT CTTTGGCGAG CGTCTGCATG ACCAGGAGCG AGGCTGGTTC CCCAGCAATA TGACCGAGGA GATCTTGAAC CCCAAGATCC GGTCCCAGAA CCTCAAGGAG TGTTTCCGTG TCCACAAGAT GGACGACCCT CAGCGCAGCC AGAATAAGGA CCGCAGGAAG CTGGGCAGCC GGAATCGGCA ATGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa232949 |
Clone ID Related Accession (Same CDS sequence) |
XM_024989649.1
, XM_024989652.1
, XM_024989651.1
|
Accession Version |
XM_024989652.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 2004bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
ephexin-1 isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037330.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981
| ATGCCCCATA CCGACCAGGA GGCACAAGAC AAAGCATCCC ATACCAAGCC AATCCAGAGA AACTCCACCT TCAATCGCGC CGTGAGACTC AGAAGCAGAG GCAAAGCCAG AGGCACTTCT GAGGGGAACC CCGGCTACCC AGCAGATCCA CTGGAAAATG AGAACTCTGT CAATGAACCC CTGACCTTGA ATTTGCCGCA GAGCAGAAAG CACCTCTGGA GGATACCAAT CCAGACAGAC CCAGGAGCCG AGAGAACAAG CGAGTCGTCC TCTACCCCAG GAAATGGGGC TACGCCCGAG GAGTTCCCGG CCCTCGCAGA CAGCCCCACC ACGCTCACCG AGGCCTTGCA GATGATCCAC CCTATTCCCG CCGACTCCTG GAGAAACCTC ATTGAACAAA TAGGGCTCCT GTATCAGGAA TACCGAGATA AATCAACTCT CCAAGAGATT GAGACCAGGA GGCAACAGGA TGCAGAAATA CAAGGTGCTG CTGACGGGTG CCCATCCAGC GAGGAGGCTC CAGAGGAAGA TGAAGGGGAG GAGGAGGAAC CAGCAAGCCC ACCTGAGAGG AAGGCCCTGC CCCAGATCTG CCTGCTCAGC AACCCCCACT CGAGATTCAA CCTCTGGCAG GATCTCCCGG AGATTCAGAG CAGCGGGGTG CTGGACATCC TCCAGCCGGA GGAGATCAGG CTGCAAGAGG CCATGTTCGA GCTCATCACT TCTGAGGCCT CCTACTATAA AAGCCTGAAC CTTCTGGTGT CCCACTTCAT GGAGAACGAG CGGCTGAAGA AGATCCTGCA CCCGTCTGAG GCCCACATCC TCTTCTCCAA CGTGCTGGAT GTCATGGCCG TCAGTGAGCG GTTTCTGTTG GAGCTGGAGC GCCGGATGGA GGAAAACATC GTCATCTCGG ACGTGTGTGA CATCGTGTAC CGCTACGCCG CTGACCACTT CTCCGTCTAC ATCACCTACG TCAGCAACCA GACCTACCAG GAGCGGACCT ATAAGCAGCT GCTCCAGGAG AAGGCAGCCT TCCGGGAGCT GATCGCGCAG CTGGAGTTGG ACCCCAAGTG CAGGGGGCTG CCCCTCTCCT CCTTCCTCAT CCTGCCTTTC CAGAGGATCA CGCGCCTCAA GCTGTTGGTC CAGAACATCC TGAAGAGGGT GGAGGAAAGG TCTGAGCGCG AAGGCACCGC CTTGGACGCC CACAAGGAAC TGGAGCTGGT GGTGAAAGCA TGCAACGAGG GCGTCAGGAA GATGAGCCGC ACGGAGCAGA TGATCAGCAT CCAGAAGAAG ATGGAGTTCA AGATCAAGTC GGTGCCCATC ATCTCACACT CCCGCTGGCT GCTGAAGCAG GGCGAGCTGC AGCAGATGTC CGGCCCCAAG ACCTCGCGGA CCCTGCGGAC CAAGAAACTC TTCCGGGAGA TTTACCTCTT TCTCTTCAAC GACCTGCTGG TGATTTGCCG GCAGATTCCA GGAGACAAGT ACCAGGTGTT TGACTCGGCC CCGCGAGGCC TGCTGCGCGC GGAGGAACTG GAGGACCAGG GCCAGACGCT GGCCAACGTC TTCATCCTAC GGCTGCTCGA GAACTCAGAC GATCGGGAGG CCACTTACAT GCTGAAGGCG TCCTCTCAGA GCGAGATGAA GCGCTGGATG ACCTCGCTGG CCCCCAACCG AAGAACTAAG TTCGTTTCCT TCACGTCCCG GCTGCTCGAC TGCCCCCAGG TCCAGTGTGT GCACCCGTAT GTGGCCCAGC AGCCGGATGA GCTGACGCTG GAGCTGGCCG ACATCCTCAA CATCCTGGAC AAGACAGAGG ACGGCTGGAT CTTTGGCGAG CGTCTGCATG ACCAGGAGCG AGGCTGGTTC CCCAGCAATA TGACCGAGGA GATCTTGAAC CCCAAGATCC GGTCCCAGAA CCTCAAGGAG TGTTTCCGTG TCCACAAGAT GGACGACCCT CAGCGCAGCC AGAATAAGGA CCGCAGGAAG CTGGGCAGCC GGAATCGGCA ATGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_024845420.1 |
CDS | 337..2340 |
Translation | |
Target ORF information:
RefSeq Version | XM_024989652.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus neuronal guanine nucleotide exchange factor (NGEF), transcript variant X3, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_024989652.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981
| ATGCCCCATA CCGACCAGGA GGCACAAGAC AAAGCATCCC ATACCAAGCC AATCCAGAGA AACTCCACCT TCAATCGCGC CGTGAGACTC AGAAGCAGAG GCAAAGCCAG AGGCACTTCT GAGGGGAACC CCGGCTACCC AGCAGATCCA CTGGAAAATG AGAACTCTGT CAATGAACCC CTGACCTTGA ATTTGCCGCA GAGCAGAAAG CACCTCTGGA GGATACCAAT CCAGACAGAC CCAGGAGCCG AGAGAACAAG CGAGTCGTCC TCTACCCCAG GAAATGGGGC TACGCCCGAG GAGTTCCCGG CCCTCGCAGA CAGCCCCACC ACGCTCACCG AGGCCTTGCA GATGATCCAC CCTATTCCCG CCGACTCCTG GAGAAACCTC ATTGAACAAA TAGGGCTCCT GTATCAGGAA TACCGAGATA AATCAACTCT CCAAGAGATT GAGACCAGGA GGCAACAGGA TGCAGAAATA CAAGGTGCTG CTGACGGGTG CCCATCCAGC GAGGAGGCTC CAGAGGAAGA TGAAGGGGAG GAGGAGGAAC CAGCAAGCCC ACCTGAGAGG AAGGCCCTGC CCCAGATCTG CCTGCTCAGC AACCCCCACT CGAGATTCAA CCTCTGGCAG GATCTCCCGG AGATTCAGAG CAGCGGGGTG CTGGACATCC TCCAGCCGGA GGAGATCAGG CTGCAAGAGG CCATGTTCGA GCTCATCACT TCTGAGGCCT CCTACTATAA AAGCCTGAAC CTTCTGGTGT CCCACTTCAT GGAGAACGAG CGGCTGAAGA AGATCCTGCA CCCGTCTGAG GCCCACATCC TCTTCTCCAA CGTGCTGGAT GTCATGGCCG TCAGTGAGCG GTTTCTGTTG GAGCTGGAGC GCCGGATGGA GGAAAACATC GTCATCTCGG ACGTGTGTGA CATCGTGTAC CGCTACGCCG CTGACCACTT CTCCGTCTAC ATCACCTACG TCAGCAACCA GACCTACCAG GAGCGGACCT ATAAGCAGCT GCTCCAGGAG AAGGCAGCCT TCCGGGAGCT GATCGCGCAG CTGGAGTTGG ACCCCAAGTG CAGGGGGCTG CCCCTCTCCT CCTTCCTCAT CCTGCCTTTC CAGAGGATCA CGCGCCTCAA GCTGTTGGTC CAGAACATCC TGAAGAGGGT GGAGGAAAGG TCTGAGCGCG AAGGCACCGC CTTGGACGCC CACAAGGAAC TGGAGCTGGT GGTGAAAGCA TGCAACGAGG GCGTCAGGAA GATGAGCCGC ACGGAGCAGA TGATCAGCAT CCAGAAGAAG ATGGAGTTCA AGATCAAGTC GGTGCCCATC ATCTCACACT CCCGCTGGCT GCTGAAGCAG GGCGAGCTGC AGCAGATGTC CGGCCCCAAG ACCTCGCGGA CCCTGCGGAC CAAGAAACTC TTCCGGGAGA TTTACCTCTT TCTCTTCAAC GACCTGCTGG TGATTTGCCG GCAGATTCCA GGAGACAAGT ACCAGGTGTT TGACTCGGCC CCGCGAGGCC TGCTGCGCGC GGAGGAACTG GAGGACCAGG GCCAGACGCT GGCCAACGTC TTCATCCTAC GGCTGCTCGA GAACTCAGAC GATCGGGAGG CCACTTACAT GCTGAAGGCG TCCTCTCAGA GCGAGATGAA GCGCTGGATG ACCTCGCTGG CCCCCAACCG AAGAACTAAG TTCGTTTCCT TCACGTCCCG GCTGCTCGAC TGCCCCCAGG TCCAGTGTGT GCACCCGTAT GTGGCCCAGC AGCCGGATGA GCTGACGCTG GAGCTGGCCG ACATCCTCAA CATCCTGGAC AAGACAGAGG ACGGCTGGAT CTTTGGCGAG CGTCTGCATG ACCAGGAGCG AGGCTGGTTC CCCAGCAATA TGACCGAGGA GATCTTGAAC CCCAAGATCC GGTCCCAGAA CCTCAAGGAG TGTTTCCGTG TCCACAAGAT GGACGACCCT CAGCGCAGCC AGAATAAGGA CCGCAGGAAG CTGGGCAGCC GGAATCGGCA ATGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa232949 |
Clone ID Related Accession (Same CDS sequence) |
XM_024989649.1
, XM_024989652.1
, XM_024989651.1
|
Accession Version |
XM_024989651.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 2004bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
ephexin-1 isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037330.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981
| ATGCCCCATA CCGACCAGGA GGCACAAGAC AAAGCATCCC ATACCAAGCC AATCCAGAGA AACTCCACCT TCAATCGCGC CGTGAGACTC AGAAGCAGAG GCAAAGCCAG AGGCACTTCT GAGGGGAACC CCGGCTACCC AGCAGATCCA CTGGAAAATG AGAACTCTGT CAATGAACCC CTGACCTTGA ATTTGCCGCA GAGCAGAAAG CACCTCTGGA GGATACCAAT CCAGACAGAC CCAGGAGCCG AGAGAACAAG CGAGTCGTCC TCTACCCCAG GAAATGGGGC TACGCCCGAG GAGTTCCCGG CCCTCGCAGA CAGCCCCACC ACGCTCACCG AGGCCTTGCA GATGATCCAC CCTATTCCCG CCGACTCCTG GAGAAACCTC ATTGAACAAA TAGGGCTCCT GTATCAGGAA TACCGAGATA AATCAACTCT CCAAGAGATT GAGACCAGGA GGCAACAGGA TGCAGAAATA CAAGGTGCTG CTGACGGGTG CCCATCCAGC GAGGAGGCTC CAGAGGAAGA TGAAGGGGAG GAGGAGGAAC CAGCAAGCCC ACCTGAGAGG AAGGCCCTGC CCCAGATCTG CCTGCTCAGC AACCCCCACT CGAGATTCAA CCTCTGGCAG GATCTCCCGG AGATTCAGAG CAGCGGGGTG CTGGACATCC TCCAGCCGGA GGAGATCAGG CTGCAAGAGG CCATGTTCGA GCTCATCACT TCTGAGGCCT CCTACTATAA AAGCCTGAAC CTTCTGGTGT CCCACTTCAT GGAGAACGAG CGGCTGAAGA AGATCCTGCA CCCGTCTGAG GCCCACATCC TCTTCTCCAA CGTGCTGGAT GTCATGGCCG TCAGTGAGCG GTTTCTGTTG GAGCTGGAGC GCCGGATGGA GGAAAACATC GTCATCTCGG ACGTGTGTGA CATCGTGTAC CGCTACGCCG CTGACCACTT CTCCGTCTAC ATCACCTACG TCAGCAACCA GACCTACCAG GAGCGGACCT ATAAGCAGCT GCTCCAGGAG AAGGCAGCCT TCCGGGAGCT GATCGCGCAG CTGGAGTTGG ACCCCAAGTG CAGGGGGCTG CCCCTCTCCT CCTTCCTCAT CCTGCCTTTC CAGAGGATCA CGCGCCTCAA GCTGTTGGTC CAGAACATCC TGAAGAGGGT GGAGGAAAGG TCTGAGCGCG AAGGCACCGC CTTGGACGCC CACAAGGAAC TGGAGCTGGT GGTGAAAGCA TGCAACGAGG GCGTCAGGAA GATGAGCCGC ACGGAGCAGA TGATCAGCAT CCAGAAGAAG ATGGAGTTCA AGATCAAGTC GGTGCCCATC ATCTCACACT CCCGCTGGCT GCTGAAGCAG GGCGAGCTGC AGCAGATGTC CGGCCCCAAG ACCTCGCGGA CCCTGCGGAC CAAGAAACTC TTCCGGGAGA TTTACCTCTT TCTCTTCAAC GACCTGCTGG TGATTTGCCG GCAGATTCCA GGAGACAAGT ACCAGGTGTT TGACTCGGCC CCGCGAGGCC TGCTGCGCGC GGAGGAACTG GAGGACCAGG GCCAGACGCT GGCCAACGTC TTCATCCTAC GGCTGCTCGA GAACTCAGAC GATCGGGAGG CCACTTACAT GCTGAAGGCG TCCTCTCAGA GCGAGATGAA GCGCTGGATG ACCTCGCTGG CCCCCAACCG AAGAACTAAG TTCGTTTCCT TCACGTCCCG GCTGCTCGAC TGCCCCCAGG TCCAGTGTGT GCACCCGTAT GTGGCCCAGC AGCCGGATGA GCTGACGCTG GAGCTGGCCG ACATCCTCAA CATCCTGGAC AAGACAGAGG ACGGCTGGAT CTTTGGCGAG CGTCTGCATG ACCAGGAGCG AGGCTGGTTC CCCAGCAATA TGACCGAGGA GATCTTGAAC CCCAAGATCC GGTCCCAGAA CCTCAAGGAG TGTTTCCGTG TCCACAAGAT GGACGACCCT CAGCGCAGCC AGAATAAGGA CCGCAGGAAG CTGGGCAGCC GGAATCGGCA ATGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_024845419.1 |
CDS | 366..2369 |
Translation | |
Target ORF information:
RefSeq Version | XM_024989651.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus neuronal guanine nucleotide exchange factor (NGEF), transcript variant X2, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_024989651.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981
| ATGCCCCATA CCGACCAGGA GGCACAAGAC AAAGCATCCC ATACCAAGCC AATCCAGAGA AACTCCACCT TCAATCGCGC CGTGAGACTC AGAAGCAGAG GCAAAGCCAG AGGCACTTCT GAGGGGAACC CCGGCTACCC AGCAGATCCA CTGGAAAATG AGAACTCTGT CAATGAACCC CTGACCTTGA ATTTGCCGCA GAGCAGAAAG CACCTCTGGA GGATACCAAT CCAGACAGAC CCAGGAGCCG AGAGAACAAG CGAGTCGTCC TCTACCCCAG GAAATGGGGC TACGCCCGAG GAGTTCCCGG CCCTCGCAGA CAGCCCCACC ACGCTCACCG AGGCCTTGCA GATGATCCAC CCTATTCCCG CCGACTCCTG GAGAAACCTC ATTGAACAAA TAGGGCTCCT GTATCAGGAA TACCGAGATA AATCAACTCT CCAAGAGATT GAGACCAGGA GGCAACAGGA TGCAGAAATA CAAGGTGCTG CTGACGGGTG CCCATCCAGC GAGGAGGCTC CAGAGGAAGA TGAAGGGGAG GAGGAGGAAC CAGCAAGCCC ACCTGAGAGG AAGGCCCTGC CCCAGATCTG CCTGCTCAGC AACCCCCACT CGAGATTCAA CCTCTGGCAG GATCTCCCGG AGATTCAGAG CAGCGGGGTG CTGGACATCC TCCAGCCGGA GGAGATCAGG CTGCAAGAGG CCATGTTCGA GCTCATCACT TCTGAGGCCT CCTACTATAA AAGCCTGAAC CTTCTGGTGT CCCACTTCAT GGAGAACGAG CGGCTGAAGA AGATCCTGCA CCCGTCTGAG GCCCACATCC TCTTCTCCAA CGTGCTGGAT GTCATGGCCG TCAGTGAGCG GTTTCTGTTG GAGCTGGAGC GCCGGATGGA GGAAAACATC GTCATCTCGG ACGTGTGTGA CATCGTGTAC CGCTACGCCG CTGACCACTT CTCCGTCTAC ATCACCTACG TCAGCAACCA GACCTACCAG GAGCGGACCT ATAAGCAGCT GCTCCAGGAG AAGGCAGCCT TCCGGGAGCT GATCGCGCAG CTGGAGTTGG ACCCCAAGTG CAGGGGGCTG CCCCTCTCCT CCTTCCTCAT CCTGCCTTTC CAGAGGATCA CGCGCCTCAA GCTGTTGGTC CAGAACATCC TGAAGAGGGT GGAGGAAAGG TCTGAGCGCG AAGGCACCGC CTTGGACGCC CACAAGGAAC TGGAGCTGGT GGTGAAAGCA TGCAACGAGG GCGTCAGGAA GATGAGCCGC ACGGAGCAGA TGATCAGCAT CCAGAAGAAG ATGGAGTTCA AGATCAAGTC GGTGCCCATC ATCTCACACT CCCGCTGGCT GCTGAAGCAG GGCGAGCTGC AGCAGATGTC CGGCCCCAAG ACCTCGCGGA CCCTGCGGAC CAAGAAACTC TTCCGGGAGA TTTACCTCTT TCTCTTCAAC GACCTGCTGG TGATTTGCCG GCAGATTCCA GGAGACAAGT ACCAGGTGTT TGACTCGGCC CCGCGAGGCC TGCTGCGCGC GGAGGAACTG GAGGACCAGG GCCAGACGCT GGCCAACGTC TTCATCCTAC GGCTGCTCGA GAACTCAGAC GATCGGGAGG CCACTTACAT GCTGAAGGCG TCCTCTCAGA GCGAGATGAA GCGCTGGATG ACCTCGCTGG CCCCCAACCG AAGAACTAAG TTCGTTTCCT TCACGTCCCG GCTGCTCGAC TGCCCCCAGG TCCAGTGTGT GCACCCGTAT GTGGCCCAGC AGCCGGATGA GCTGACGCTG GAGCTGGCCG ACATCCTCAA CATCCTGGAC AAGACAGAGG ACGGCTGGAT CTTTGGCGAG CGTCTGCATG ACCAGGAGCG AGGCTGGTTC CCCAGCAATA TGACCGAGGA GATCTTGAAC CCCAAGATCC GGTCCCAGAA CCTCAAGGAG TGTTTCCGTG TCCACAAGAT GGACGACCCT CAGCGCAGCC AGAATAAGGA CCGCAGGAAG CTGGGCAGCC GGAATCGGCA ATGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
A whole-genome assembly of the domestic cow, Bos taurus.
Genome biology10(4)R42(2009)
Zimin AV,Delcher AL,Florea L,Kelley DR,Schatz MC,Puiu D,Hanrahan F,Pertea G,Van Tassell CP,Sonstegard TS,Mar?ais G,Roberts M,Subramanian P,Yorke JA,Salzberg SL |