Gene Symbol | SYNPR |
Entrez Gene ID | 613433 |
Full Name | synaptoporin |
General protein information |
|
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » SYNPR cDNA ORF clone
Gene Symbol | SYNPR |
Entrez Gene ID | 613433 |
Full Name | synaptoporin |
General protein information |
|
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
XM_005222694.4 | XP_005222751.1 | synaptoporin isoform X1 |
XM_015459525.1 | XP_015315011.1 | synaptoporin isoform X2 |
XM_015459525.2 | XP_015315011.1 | synaptoporin isoform X2 |
XM_005222694.3 | XP_005222751.1 | synaptoporin isoform X1 |
NM_001046506.1 | NP_001039971.1 | synaptoporin precursor |
Canis lupus familiaris (dog) | SYNPR | XP_003432857.1 |
Mus musculus (house mouse) | Synpr | NP_082328.3 |
Homo sapiens (human) | SYNPR | NP_001123475.1 |
SYNPR | XP_001093248.2 | |
Gallus gallus (chicken) | SYNPR | NP_990725.1 |
Pan troglodytes (chimpanzee) | SYNPR | XP_001174562.1 |
Rattus norvegicus (Norway rat) | Synpr | NP_076464.1 |
Danio rerio (zebrafish) | LOC558290 | XP_686583.4 |
Bos taurus (cattle) | SYNPR | NP_001039971.1 |
Xenopus tropicalis (tropical clawed frog) | synpr | NP_001072689.1 |
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
Evidence that bovine forebrain embryonic zinc finger-like gene influences immune response associated with mastitis resistance.
Sugimoto M, Fujikawa A, Womack JE, Sugimoto Y
Proceedings of the National Academy of Sciences of the United States of America103(17)6454-9(2006 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following SYNPR gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SYNPR cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa37929 | |
Clone ID Related Accession (Same CDS sequence) | NM_001046506.1 | |
Accession Version | NM_001046506.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 798bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-13 | |
Organism | Bos taurus(cattle) | |
Product | synaptoporin precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC122611.1. On Sep 7, 2006 this sequence version replaced XM_864190.1. ##Evidence-Data-START## Transcript exon combination :: BC122611.1, DQ335873.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145419, SAMN03145431 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTGTATGG TGATATTTGC TCCGCTTTTT GCAATCTTTG CATTTGCAAC ATGCGGTGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001039971.1 |
CDS | 88..885 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001046506.1 |
1 | ATGTGTATGG TGATATTTGC TCCGCTTTTT GCAATCTTTG CATTTGCAAC ATGCGGTGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa31476 | |
Clone ID Related Accession (Same CDS sequence) | XM_005222694.4 , XM_005222694.3 | |
Accession Version | XM_005222694.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 858bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | synaptoporin isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037349.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005222694.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATCCCG TGAGCCAGCT GGCGTCAGCA GGTACCTTCC GGGCGCTGAA GGAGCCCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005222751.1 |
CDS | 210..1067 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005222694.4 |
1 | ATGGATCCCG TGAGCCAGCT GGCGTCAGCA GGTACCTTCC GGGCGCTGAA GGAGCCCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa31476 | |
Clone ID Related Accession (Same CDS sequence) | XM_005222694.4 , XM_005222694.3 | |
Accession Version | XM_005222694.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 858bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | synaptoporin isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104543.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005222694.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATCCCG TGAGCCAGCT GGCGTCAGCA GGTACCTTCC GGGCGCTGAA GGAGCCCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005222751.1 |
CDS | 217..1074 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005222694.3 |
1 | ATGGATCCCG TGAGCCAGCT GGCGTCAGCA GGTACCTTCC GGGCGCTGAA GGAGCCCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa94389 | |
Clone ID Related Accession (Same CDS sequence) | XM_015459525.1 , XM_015459525.2 | |
Accession Version | XM_015459525.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 846bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | synaptoporin isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104543.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGTCTGC CCAAGTTCAG CACATCAGCT GTGCCATGGA GGATAGCTTG CCGTCTGCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015315011.1 |
CDS | 74..919 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015459525.1 |
1 | ATGGGTCTGC CCAAGTTCAG CACATCAGCT GTGCCATGGA GGATAGCTTG CCGTCTGCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa94389 | |
Clone ID Related Accession (Same CDS sequence) | XM_015459525.1 , XM_015459525.2 | |
Accession Version | XM_015459525.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 846bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | synaptoporin isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037349.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_015459525.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGTCTGC CCAAGTTCAG CACATCAGCT GTGCCATGGA GGATAGCTTG CCGTCTGCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015315011.1 |
CDS | 234..1079 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015459525.2 |
1 | ATGGGTCTGC CCAAGTTCAG CACATCAGCT GTGCCATGGA GGATAGCTTG CCGTCTGCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |
Evidence that bovine forebrain embryonic zinc finger-like gene influences immune response associated with mastitis resistance. |