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dbr-1 cDNA ORF clone, Caenorhabditis elegans

Summary

Gene Symbol dbr-1
Entrez Gene ID 172357
Full Name Lariat debranching enzyme
Gene Type protein-coding
Organism Caenorhabditis elegans

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_059467.6 NP_491868.2 Lariat debranching enzyme
NM_059467.5 NP_491868.2 Lariat debranching enzyme

Pathways from BioSystems


Homologies


Danio rerio (zebrafish) dbr1 NP_955947.1
Caenorhabditis elegans (roundworm) dbr-1 NP_491868.2
Schizosaccharomyces pombe (fission yeast) dbr1 NP_593470.2
Magnaporthe oryzae (rice blast fungus) MGG_03897 XP_003719979.1
Neurospora crassa NCU03409 XP_956856.1
Bos taurus (cattle) DBR1 NP_001073759.1
Homo sapiens (human) DBR1 NP_057300.2
DBR1 XP_001114637.1
Rattus norvegicus (Norway rat) Dbr1 NP_001102907.1
Gallus gallus (chicken) DBR1 NP_001026737.1
Pan troglodytes (chimpanzee) DBR1 XP_526319.2
Drosophila melanogaster (fruit fly) ldbr NP_996022.1
Oryza sativa (rice) Os03g0725300 NP_001051129.2
Xenopus tropicalis (tropical clawed frog) dbr1 NP_988947.1
Canis lupus familiaris (dog) DBR1 XP_852077.1
Mus musculus (house mouse) Dbr1 NP_113580.2
Anopheles gambiae (African malaria mosquito) AgaP_AGAP006805 XP_308942.4
Arabidopsis thaliana (thale cress) DBR1 NP_567881.1

Gene Ontology


Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following dbr-1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the dbr-1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OCa336796 NM_059467.6
Latest version!		 Caenorhabditis elegans Lariat debranching enzyme (dbr-1), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
View Old Accession Versions >>
OCa336796 NM_059467.5 Caenorhabditis elegans Lariat debranching enzyme (dbr-1), partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $342.30
$489.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OCa336796
Clone ID Related Accession (Same CDS sequence) NM_059467.6 , NM_059467.5
Accession Version NM_059467.6 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1503bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-10-17
Organism Caenorhabditis elegans
Product Lariat debranching enzyme
Comment Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003279). On Sep 4, 2019 this sequence version replaced NM_059467.5. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
ATGTCATCGA AAAATCCAGT AGATGAGCAA CCTTGCTGTG GCTCCCATGA AGGTTCGCAT 
CAAGATCCTG CTCCGGAGAC GTTAGTAGTT GAAAAAGAAG TTAACAATGG GGAAAAGAAA 
ATACGAATTG CTGTTGTCGG ATGCTCTCAC GGAGAAATGG ATGCTATTTA TGAGACAATG 
ACACTAATCG AACAGAAAAA TGGCTACAAA TTCGATTTGC TGATCTGTTG TGGCGATTAT 
CAAGCTGTCC GAAACTACGG CGACCTTCCA CATATGAGTA TTCCACCAAA GTACAGAAGT 
CTTCAAACAT TCTATAAATA CTATTCTGGA GAACAAAAAG CACCAGTTCT AACTCTATTC 
ATCGGCGGAA ACCATGAAGC ATCTGGTTAT CTATGTGAAT TGCCTAATGG AGGATGGGTG 
GCGCCGAATA TTTATTACAT GGGATTCGCA AATTGCATTC GATTTGCTAA CCTTCGTATC 
GCAGGACTCT CTGGAATTTT CTCGCAAGGA GATTTTCAAT TTTCGCATTA CGAACGCCCT 
TCGTTTTCGG AAAGAGATGT TAAAAGCGCA TATCACGTTC GAAACGTTGA TATGTTCCGG 
TTAAGACAAT TGAAATCTGA TAATGAAAAT AAGATATCGA ACCCAATTGA CATAATGCTC 
TCACACGATT GGCCTGGAGG TATTCCTGAT TTTGGTGATA AGGAATGGCT TTTCCGGAAA 
AAGGATTTAT TTGAAGCAGA TCACAATAGT GGCAAACTGG GGAATCCTTC TGGAATGAAA 
CTGATTTATG ATTGCCGGCC CAGATACTAT CTTGCTGCAC ATCTTCATAT TGCTTTTGCG 
GCCCTTGTTC CTCATAAAGG TTCAGGATCA GGCCGTCCAC AGCCTACACG ATTCTTATCA 
CTGGATAAAC CGATTCCTGG GAGAAAGTTT ATGCAGGCTC TCGAGTTGAA TGTTGCAGAC 
GATGCTAAAC TGGAACTGTC ATATGATCCA CAATGGTTGG CTATTCTGAG AAATACAGAT 
TTATTAACAA CTGGAACAAA AGAACAGCTG ATACTTCCCG ATATGGCATC AAATCGTCCA 
TGTGTCTACG AAAGAAAAGA TTTTCGACCA ACAGCAGAGG AGTTAAAAGA AATCGAAAAA 
CTCGGAGATT TAACAATCAG AACTGACAGT TTCCAACAAA CTGCGCCTCC GTTAAAAGAG 
ATTACGGAAT CATCCAAAAA TGTGCCACCA AGCGCCTACT ACCGTAATCC ACAATCTGCC 
GAGTTTTGTC AGTGGCTTGG TATTCGGGAT CTTAATCAGA TGCTCGTTGA AAAAACATCT 
GAACACGTTG GAACTCCGTA CTACATGATG ACTCAAGACG ATGCGAACGC TAAACCAAAT 
CAAGATGACG TGGATTTTGG TGACGAAGAT TTTGTAATCG ACAGAGGGCA CACCTCCGAT 
GAGCCAGAAG CGAAAAAAAG TAGATTGGAC GAAGATAAGT TTGAAGCAGT ACCATCCGAA 
TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_491868.2
CDS2..1504
Translation

Target ORF information:

RefSeq Version NM_059467.6
Organism Caenorhabditis elegans
Definition Caenorhabditis elegans Lariat debranching enzyme (dbr-1), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_059467.6

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
ATGTCATCGA AAAATCCAGT AGATGAGCAA CCTTGCTGTG GCTCCCATGA AGGTTCGCAT 
CAAGATCCTG CTCCGGAGAC GTTAGTAGTT GAAAAAGAAG TTAACAATGG GGAAAAGAAA 
ATACGAATTG CTGTTGTCGG ATGCTCTCAC GGAGAAATGG ATGCTATTTA TGAGACAATG 
ACACTAATCG AACAGAAAAA TGGCTACAAA TTCGATTTGC TGATCTGTTG TGGCGATTAT 
CAAGCTGTCC GAAACTACGG CGACCTTCCA CATATGAGTA TTCCACCAAA GTACAGAAGT 
CTTCAAACAT TCTATAAATA CTATTCTGGA GAACAAAAAG CACCAGTTCT AACTCTATTC 
ATCGGCGGAA ACCATGAAGC ATCTGGTTAT CTATGTGAAT TGCCTAATGG AGGATGGGTG 
GCGCCGAATA TTTATTACAT GGGATTCGCA AATTGCATTC GATTTGCTAA CCTTCGTATC 
GCAGGACTCT CTGGAATTTT CTCGCAAGGA GATTTTCAAT TTTCGCATTA CGAACGCCCT 
TCGTTTTCGG AAAGAGATGT TAAAAGCGCA TATCACGTTC GAAACGTTGA TATGTTCCGG 
TTAAGACAAT TGAAATCTGA TAATGAAAAT AAGATATCGA ACCCAATTGA CATAATGCTC 
TCACACGATT GGCCTGGAGG TATTCCTGAT TTTGGTGATA AGGAATGGCT TTTCCGGAAA 
AAGGATTTAT TTGAAGCAGA TCACAATAGT GGCAAACTGG GGAATCCTTC TGGAATGAAA 
CTGATTTATG ATTGCCGGCC CAGATACTAT CTTGCTGCAC ATCTTCATAT TGCTTTTGCG 
GCCCTTGTTC CTCATAAAGG TTCAGGATCA GGCCGTCCAC AGCCTACACG ATTCTTATCA 
CTGGATAAAC CGATTCCTGG GAGAAAGTTT ATGCAGGCTC TCGAGTTGAA TGTTGCAGAC 
GATGCTAAAC TGGAACTGTC ATATGATCCA CAATGGTTGG CTATTCTGAG AAATACAGAT 
TTATTAACAA CTGGAACAAA AGAACAGCTG ATACTTCCCG ATATGGCATC AAATCGTCCA 
TGTGTCTACG AAAGAAAAGA TTTTCGACCA ACAGCAGAGG AGTTAAAAGA AATCGAAAAA 
CTCGGAGATT TAACAATCAG AACTGACAGT TTCCAACAAA CTGCGCCTCC GTTAAAAGAG 
ATTACGGAAT CATCCAAAAA TGTGCCACCA AGCGCCTACT ACCGTAATCC ACAATCTGCC 
GAGTTTTGTC AGTGGCTTGG TATTCGGGAT CTTAATCAGA TGCTCGTTGA AAAAACATCT 
GAACACGTTG GAACTCCGTA CTACATGATG ACTCAAGACG ATGCGAACGC TAAACCAAAT 
CAAGATGACG TGGATTTTGG TGACGAAGAT TTTGTAATCG ACAGAGGGCA CACCTCCGAT 
GAGCCAGAAG CGAAAAAAAG TAGATTGGAC GAAGATAAGT TTGAAGCAGT ACCATCCGAA 
TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OCa336796
Clone ID Related Accession (Same CDS sequence) NM_059467.6 , NM_059467.5
Accession Version NM_059467.5 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1503bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-04-08
Organism Caenorhabditis elegans
Product Lariat debranching enzyme
Comment Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003279). On Jun 26, 2012 this sequence version replaced NM_059467.4. COMPLETENESS: incomplete on both ends. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
ATGTCATCGA AAAATCCAGT AGATGAGCAA CCTTGCTGTG GCTCCCATGA AGGTTCGCAT 
CAAGATCCTG CTCCGGAGAC GTTAGTAGTT GAAAAAGAAG TTAACAATGG GGAAAAGAAA 
ATACGAATTG CTGTTGTCGG ATGCTCTCAC GGAGAAATGG ATGCTATTTA TGAGACAATG 
ACACTAATCG AACAGAAAAA TGGCTACAAA TTCGATTTGC TGATCTGTTG TGGCGATTAT 
CAAGCTGTCC GAAACTACGG CGACCTTCCA CATATGAGTA TTCCACCAAA GTACAGAAGT 
CTTCAAACAT TCTATAAATA CTATTCTGGA GAACAAAAAG CACCAGTTCT AACTCTATTC 
ATCGGCGGAA ACCATGAAGC ATCTGGTTAT CTATGTGAAT TGCCTAATGG AGGATGGGTG 
GCGCCGAATA TTTATTACAT GGGATTCGCA AATTGCATTC GATTTGCTAA CCTTCGTATC 
GCAGGACTCT CTGGAATTTT CTCGCAAGGA GATTTTCAAT TTTCGCATTA CGAACGCCCT 
TCGTTTTCGG AAAGAGATGT TAAAAGCGCA TATCACGTTC GAAACGTTGA TATGTTCCGG 
TTAAGACAAT TGAAATCTGA TAATGAAAAT AAGATATCGA ACCCAATTGA CATAATGCTC 
TCACACGATT GGCCTGGAGG TATTCCTGAT TTTGGTGATA AGGAATGGCT TTTCCGGAAA 
AAGGATTTAT TTGAAGCAGA TCACAATAGT GGCAAACTGG GGAATCCTTC TGGAATGAAA 
CTGATTTATG ATTGCCGGCC CAGATACTAT CTTGCTGCAC ATCTTCATAT TGCTTTTGCG 
GCCCTTGTTC CTCATAAAGG TTCAGGATCA GGCCGTCCAC AGCCTACACG ATTCTTATCA 
CTGGATAAAC CGATTCCTGG GAGAAAGTTT ATGCAGGCTC TCGAGTTGAA TGTTGCAGAC 
GATGCTAAAC TGGAACTGTC ATATGATCCA CAATGGTTGG CTATTCTGAG AAATACAGAT 
TTATTAACAA CTGGAACAAA AGAACAGCTG ATACTTCCCG ATATGGCATC AAATCGTCCA 
TGTGTCTACG AAAGAAAAGA TTTTCGACCA ACAGCAGAGG AGTTAAAAGA AATCGAAAAA 
CTCGGAGATT TAACAATCAG AACTGACAGT TTCCAACAAA CTGCGCCTCC GTTAAAAGAG 
ATTACGGAAT CATCCAAAAA TGTGCCACCA AGCGCCTACT ACCGTAATCC ACAATCTGCC 
GAGTTTTGTC AGTGGCTTGG TATTCGGGAT CTTAATCAGA TGCTCGTTGA AAAAACATCT 
GAACACGTTG GAACTCCGTA CTACATGATG ACTCAAGACG ATGCGAACGC TAAACCAAAT 
CAAGATGACG TGGATTTTGG TGACGAAGAT TTTGTAATCG ACAGAGGGCA CACCTCCGAT 
GAGCCAGAAG CGAAAAAAAG TAGATTGGAC GAAGATAAGT TTGAAGCAGT ACCATCCGAA 
TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_491868.2
CDS1..1503
Translation

Target ORF information:

RefSeq Version NM_059467.5
Organism Caenorhabditis elegans
Definition Caenorhabditis elegans Lariat debranching enzyme (dbr-1), partial mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_059467.5

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
ATGTCATCGA AAAATCCAGT AGATGAGCAA CCTTGCTGTG GCTCCCATGA AGGTTCGCAT 
CAAGATCCTG CTCCGGAGAC GTTAGTAGTT GAAAAAGAAG TTAACAATGG GGAAAAGAAA 
ATACGAATTG CTGTTGTCGG ATGCTCTCAC GGAGAAATGG ATGCTATTTA TGAGACAATG 
ACACTAATCG AACAGAAAAA TGGCTACAAA TTCGATTTGC TGATCTGTTG TGGCGATTAT 
CAAGCTGTCC GAAACTACGG CGACCTTCCA CATATGAGTA TTCCACCAAA GTACAGAAGT 
CTTCAAACAT TCTATAAATA CTATTCTGGA GAACAAAAAG CACCAGTTCT AACTCTATTC 
ATCGGCGGAA ACCATGAAGC ATCTGGTTAT CTATGTGAAT TGCCTAATGG AGGATGGGTG 
GCGCCGAATA TTTATTACAT GGGATTCGCA AATTGCATTC GATTTGCTAA CCTTCGTATC 
GCAGGACTCT CTGGAATTTT CTCGCAAGGA GATTTTCAAT TTTCGCATTA CGAACGCCCT 
TCGTTTTCGG AAAGAGATGT TAAAAGCGCA TATCACGTTC GAAACGTTGA TATGTTCCGG 
TTAAGACAAT TGAAATCTGA TAATGAAAAT AAGATATCGA ACCCAATTGA CATAATGCTC 
TCACACGATT GGCCTGGAGG TATTCCTGAT TTTGGTGATA AGGAATGGCT TTTCCGGAAA 
AAGGATTTAT TTGAAGCAGA TCACAATAGT GGCAAACTGG GGAATCCTTC TGGAATGAAA 
CTGATTTATG ATTGCCGGCC CAGATACTAT CTTGCTGCAC ATCTTCATAT TGCTTTTGCG 
GCCCTTGTTC CTCATAAAGG TTCAGGATCA GGCCGTCCAC AGCCTACACG ATTCTTATCA 
CTGGATAAAC CGATTCCTGG GAGAAAGTTT ATGCAGGCTC TCGAGTTGAA TGTTGCAGAC 
GATGCTAAAC TGGAACTGTC ATATGATCCA CAATGGTTGG CTATTCTGAG AAATACAGAT 
TTATTAACAA CTGGAACAAA AGAACAGCTG ATACTTCCCG ATATGGCATC AAATCGTCCA 
TGTGTCTACG AAAGAAAAGA TTTTCGACCA ACAGCAGAGG AGTTAAAAGA AATCGAAAAA 
CTCGGAGATT TAACAATCAG AACTGACAGT TTCCAACAAA CTGCGCCTCC GTTAAAAGAG 
ATTACGGAAT CATCCAAAAA TGTGCCACCA AGCGCCTACT ACCGTAATCC ACAATCTGCC 
GAGTTTTGTC AGTGGCTTGG TATTCGGGAT CTTAATCAGA TGCTCGTTGA AAAAACATCT 
GAACACGTTG GAACTCCGTA CTACATGATG ACTCAAGACG ATGCGAACGC TAAACCAAAT 
CAAGATGACG TGGATTTTGG TGACGAAGAT TTTGTAATCG ACAGAGGGCA CACCTCCGAT 
GAGCCAGAAG CGAAAAAAAG TAGATTGGAC GAAGATAAGT TTGAAGCAGT ACCATCCGAA 
TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Genome sequence of the nematode C. elegans: a platform for investigating biology.
Science (New York, N.Y.)282(5396)2012-8(1998 Dec)