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ORF cDNA Clones and Custom Clones » Species Summary » Danio rerio » SI:DKEY-110K5.10 cDNA ORF clone
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SI:DKEY-110K5.10 cDNA ORF clone, Danio rerio(Zebrafish)

Summary

Gene Symbol SI:DKEY-110K5.10
Entrez Gene ID 100005704
Full Name si:dkey-110k5.10
General protein information
Preferred Names

si:dkey-110k5.10

Names

globoside alpha-1,3-N-acetylgalactosaminyltransferase 1
Gene Type protein-coding
Organism Danio rerio(Zebrafish)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_009301419.3 XP_009299694.1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1
XM_009301419.2 XP_009299694.1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1

Pathways from BioSystems


Homologies


Canis lupus familiaris (dog) GBGT1 NP_001003193.1
Danio rerio (zebrafish) LOC100005704 XP_005165294.1
Danio rerio (zebrafish) LOC100330771 XP_002661025.1
Homo sapiens (human) GBGT1 NP_068836.2
Danio rerio (zebrafish) gbgt1l3 NP_001004620.1
Danio rerio (zebrafish) si:ch211-287c22.1 NP_001122030.1
Danio rerio (zebrafish) gbgt1l1 NP_956623.1
Danio rerio (zebrafish) gbgt1l4 NP_956419.1
Danio rerio (zebrafish) gbgt1l2 NP_001120986.1
Danio rerio (zebrafish) abo NP_001116741.1
Pan troglodytes (chimpanzee) GBGT1 XP_520336.2
Mus musculus (house mouse) Gbgt1 NP_631936.2
Danio rerio (zebrafish) si:ch211-135f11.4 XP_001344454.2
Bos taurus (cattle) GBGT1 NP_001069977.1
Gallus gallus (chicken) GBGT1 NP_001025854.1

Gene Ontology

The following SI:DKEY-110K5.10 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SI:DKEY-110K5.10 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa48077 XM_009301419.3
Latest version!		 Danio rerio si:dkey-110k5.10 (si:dkey-110k5.10), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $258.30
$369.00
View Old Accession Versions >>
ODa48077 XM_009301419.2 Danio rerio si:dkey-110k5.10 (si:dkey-110k5.10), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $258.30
$369.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ODa48077
Clone ID Related Accession (Same CDS sequence) XM_009301419.3 , XM_009301419.2
Accession Version XM_009301419.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1044bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-06-14
Organism Danio rerio(zebrafish)
Product globoside alpha-1,3-N-acetylgalactosaminyltransferase 1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007116.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_009301419.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGCCACTGC GGGCAAATTT TATTTTCATC ATTCTTCTGT TTTTTGGGAT GGCATTGAGT 
GGGCTCATTT ACCTGAGCAC AAACGTGAGA AGCTGCAATC AAGAGCTCAT GGAACAGGTT 
TTTGCAACAT CCGTGGCAAA ACCAAATACC CTTGAAAGCC AGAGAAGTTT AAAAACATCT 
CCAGGGTTTC AGTACAAACA GCCCAGTTTG CTAGCAGGTC GGGCAGATGT TGTTTCTTTA 
TCACCATGGC TAGCCCCTAT CATTTGGGAG GGAACCTTTA ACCCCACGCT GATTGATTCT 
ATCTACAAGC AACATAACAT CACCATTGCC ACCACTGTCT TCGCTTTGGG AAAATACACG 
CGTTTTCTCA AAGATTTTCT GGAGTCAGCG GAGGAGCATT ACTTTGTTGG ATTTGGAGTC 
CATTATTACC TGTTCACGGA TCAGCCTGAA GCAGTTCCTG AAGTAAAGAT GGGTAAAAAC 
CATCGTTTGA CAGTCAGAAA GGTCCCAAGT TTGGACCGAT GGCAGGACAT AAGTATGGGC 
AGGATGGAGA TACTGGAAAA ACTAATAGCG GATGAACTGA TGCATGAAGC CAACTATATA 
TTCTGCCTTG ACGTGGATAC GAAGTTCTAT GGCCGCTGGG GATCAGAGAC TTTGGGTAAT 
CTGGTAGGTG TGATTCACCC TTGGCTTTTT GATTATCCAA GGGAATCATT TACATACGAG 
CGAAGACCAG AGTCTAAAGC ATTTATTCCG GTTGGGGAAG GGGATTATTA TTACACTGCT 
GCTGCATTTG GTGGCACATT AGAGGAAATA CATCGTCTCA CCAAAACCTG CCGCGAGCAG 
CTGAACGCTG ATCATGAAAA CTCCATTGAG GCAATATGGC ATGAGGAGTC TCACTTAAAC 
AAGTATTTCC TTTACAACAA ACCCACTAAG CTGCTGTCAC CTGAGTATCT GTGGCGGGAC 
ATCAACATAA GTGCAGGACA AATAAAAATT ATTCGCTTCT CTCATGTGGC TAAAAACAAT 
GCAGAGGTTC GTCCAAATGC ATGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_009299694.1
CDS606..1649
Translation

Target ORF information:

RefSeq Version XM_009301419.3
Organism Danio rerio(zebrafish)
Definition Danio rerio si:dkey-110k5.10 (si:dkey-110k5.10), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_009301419.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGCCACTGC GGGCAAATTT TATTTTCATC ATTCTTCTGT TTTTTGGGAT GGCATTGAGT 
GGGCTCATTT ACCTGAGCAC AAACGTGAGA AGCTGCAATC AAGAGCTCAT GGAACAGGTT 
TTTGCAACAT CCGTGGCAAA ACCAAATACC CTTGAAAGCC AGAGAAGTTT AAAAACATCT 
CCAGGGTTTC AGTACAAACA GCCCAGTTTG CTAGCAGGTC GGGCAGATGT TGTTTCTTTA 
TCACCATGGC TAGCCCCTAT CATTTGGGAG GGAACCTTTA ACCCCACGCT GATTGATTCT 
ATCTACAAGC AACATAACAT CACCATTGCC ACCACTGTCT TCGCTTTGGG AAAATACACG 
CGTTTTCTCA AAGATTTTCT GGAGTCAGCG GAGGAGCATT ACTTTGTTGG ATTTGGAGTC 
CATTATTACC TGTTCACGGA TCAGCCTGAA GCAGTTCCTG AAGTAAAGAT GGGTAAAAAC 
CATCGTTTGA CAGTCAGAAA GGTCCCAAGT TTGGACCGAT GGCAGGACAT AAGTATGGGC 
AGGATGGAGA TACTGGAAAA ACTAATAGCG GATGAACTGA TGCATGAAGC CAACTATATA 
TTCTGCCTTG ACGTGGATAC GAAGTTCTAT GGCCGCTGGG GATCAGAGAC TTTGGGTAAT 
CTGGTAGGTG TGATTCACCC TTGGCTTTTT GATTATCCAA GGGAATCATT TACATACGAG 
CGAAGACCAG AGTCTAAAGC ATTTATTCCG GTTGGGGAAG GGGATTATTA TTACACTGCT 
GCTGCATTTG GTGGCACATT AGAGGAAATA CATCGTCTCA CCAAAACCTG CCGCGAGCAG 
CTGAACGCTG ATCATGAAAA CTCCATTGAG GCAATATGGC ATGAGGAGTC TCACTTAAAC 
AAGTATTTCC TTTACAACAA ACCCACTAAG CTGCTGTCAC CTGAGTATCT GTGGCGGGAC 
ATCAACATAA GTGCAGGACA AATAAAAATT ATTCGCTTCT CTCATGTGGC TAAAAACAAT 
GCAGAGGTTC GTCCAAATGC ATGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa48077
Clone ID Related Accession (Same CDS sequence) XM_009301419.3 , XM_009301419.2
Accession Version XM_009301419.2 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1044bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-23
Organism Danio rerio(Zebrafish)
Product globoside alpha-1,3-N-acetylgalactosaminyltransferase 1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007116.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009301419.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGCCACTGC GGGCAAATTT TATTTTCATC ATTCTTCTGT TTTTTGGGAT GGCATTGAGT 
GGGCTCATTT ACCTGAGCAC AAACGTGAGA AGCTGCAATC AAGAGCTCAT GGAACAGGTT 
TTTGCAACAT CCGTGGCAAA ACCAAATACC CTTGAAAGCC AGAGAAGTTT AAAAACATCT 
CCAGGGTTTC AGTACAAACA GCCCAGTTTG CTAGCAGGTC GGGCAGATGT TGTTTCTTTA 
TCACCATGGC TAGCCCCTAT CATTTGGGAG GGAACCTTTA ACCCCACGCT GATTGATTCT 
ATCTACAAGC AACATAACAT CACCATTGCC ACCACTGTCT TCGCTTTGGG AAAATACACG 
CGTTTTCTCA AAGATTTTCT GGAGTCAGCG GAGGAGCATT ACTTTGTTGG ATTTGGAGTC 
CATTATTACC TGTTCACGGA TCAGCCTGAA GCAGTTCCTG AAGTAAAGAT GGGTAAAAAC 
CATCGTTTGA CAGTCAGAAA GGTCCCAAGT TTGGACCGAT GGCAGGACAT AAGTATGGGC 
AGGATGGAGA TACTGGAAAA ACTAATAGCG GATGAACTGA TGCATGAAGC CAACTATATA 
TTCTGCCTTG ACGTGGATAC GAAGTTCTAT GGCCGCTGGG GATCAGAGAC TTTGGGTAAT 
CTGGTAGGTG TGATTCACCC TTGGCTTTTT GATTATCCAA GGGAATCATT TACATACGAG 
CGAAGACCAG AGTCTAAAGC ATTTATTCCG GTTGGGGAAG GGGATTATTA TTACACTGCT 
GCTGCATTTG GTGGCACATT AGAGGAAATA CATCGTCTCA CCAAAACCTG CCGCGAGCAG 
CTGAACGCTG ATCATGAAAA CTCCATTGAG GCAATATGGC ATGAGGAGTC TCACTTAAAC 
AAGTATTTCC TTTACAACAA ACCCACTAAG CTGCTGTCAC CTGAGTATCT GTGGCGGGAC 
ATCAACATAA GTGCAGGACA AATAAAAATT ATTCGCTTCT CTCATGTGGC TAAAAACAAT 
GCAGAGGTTC GTCCAAATGC ATGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_009299694.1
CDS605..1648
Translation

Target ORF information:

RefSeq Version XM_009301419.2
Organism Danio rerio(Zebrafish)
Definition Danio rerio si:dkey-110k5.10 (si:dkey-110k5.10), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_009301419.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGCCACTGC GGGCAAATTT TATTTTCATC ATTCTTCTGT TTTTTGGGAT GGCATTGAGT 
GGGCTCATTT ACCTGAGCAC AAACGTGAGA AGCTGCAATC AAGAGCTCAT GGAACAGGTT 
TTTGCAACAT CCGTGGCAAA ACCAAATACC CTTGAAAGCC AGAGAAGTTT AAAAACATCT 
CCAGGGTTTC AGTACAAACA GCCCAGTTTG CTAGCAGGTC GGGCAGATGT TGTTTCTTTA 
TCACCATGGC TAGCCCCTAT CATTTGGGAG GGAACCTTTA ACCCCACGCT GATTGATTCT 
ATCTACAAGC AACATAACAT CACCATTGCC ACCACTGTCT TCGCTTTGGG AAAATACACG 
CGTTTTCTCA AAGATTTTCT GGAGTCAGCG GAGGAGCATT ACTTTGTTGG ATTTGGAGTC 
CATTATTACC TGTTCACGGA TCAGCCTGAA GCAGTTCCTG AAGTAAAGAT GGGTAAAAAC 
CATCGTTTGA CAGTCAGAAA GGTCCCAAGT TTGGACCGAT GGCAGGACAT AAGTATGGGC 
AGGATGGAGA TACTGGAAAA ACTAATAGCG GATGAACTGA TGCATGAAGC CAACTATATA 
TTCTGCCTTG ACGTGGATAC GAAGTTCTAT GGCCGCTGGG GATCAGAGAC TTTGGGTAAT 
CTGGTAGGTG TGATTCACCC TTGGCTTTTT GATTATCCAA GGGAATCATT TACATACGAG 
CGAAGACCAG AGTCTAAAGC ATTTATTCCG GTTGGGGAAG GGGATTATTA TTACACTGCT 
GCTGCATTTG GTGGCACATT AGAGGAAATA CATCGTCTCA CCAAAACCTG CCGCGAGCAG 
CTGAACGCTG ATCATGAAAA CTCCATTGAG GCAATATGGC ATGAGGAGTC TCACTTAAAC 
AAGTATTTCC TTTACAACAA ACCCACTAAG CTGCTGTCAC CTGAGTATCT GTGGCGGGAC 
ATCAACATAA GTGCAGGACA AATAAAAATT ATTCGCTTCT CTCATGTGGC TAAAAACAAT 
GCAGAGGTTC GTCCAAATGC ATGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed