Gene Symbol | COL21A1 |
Entrez Gene ID | 100333837 |
Full Name | collagen, type XXI, alpha 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(Zebrafish) |
ORF » Species Summary » Danio rerio » COL21A1 cDNA ORF clone
Gene Symbol | COL21A1 |
Entrez Gene ID | 100333837 |
Full Name | collagen, type XXI, alpha 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(Zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_002664080.5 | XP_002664126.4 | collagen alpha-1(XXI) chain-like isoform X1 |
XM_017358915.1 | XP_017214404.1 | collagen alpha-1(XXI) chain-like isoform X5 |
XM_017358911.1 | XP_017214400.1 | collagen alpha-1(XXI) chain-like isoform X1 |
XM_002664080.6 | XP_002664126.4 | collagen alpha-1(XXI) chain-like isoform X1 |
XM_017358912.1 | XP_017214401.1 | collagen alpha-1(XXI) chain-like isoform X2 |
XM_017358914.1 | XP_017214403.1 | collagen alpha-1(XXI) chain-like isoform X4 |
XM_017358912.2 | XP_017214401.1 | collagen alpha-1(XXI) chain-like isoform X2 |
XM_017358915.2 | XP_017214404.1 | collagen alpha-1(XXI) chain-like isoform X3 |
XM_017358913.1 | XP_017214402.1 | collagen alpha-1(XXI) chain-like isoform X3 |
Gallus gallus (chicken) | COL21A1 | XP_004940520.1 |
Homo sapiens (human) | COL21A1 | NP_110447.2 |
COL21A1 | XP_001110086.1 | |
Danio rerio (zebrafish) | LOC100333837 | XP_002664126.3 |
Canis lupus familiaris (dog) | COL21A1 | XP_005627552.1 |
Bos taurus (cattle) | COL21A1 | XP_003587710.2 |
Xenopus tropicalis (tropical clawed frog) | col21a1 | XP_002934910.1 |
Pan troglodytes (chimpanzee) | COL21A1 | XP_001157649.1 |
The following COL21A1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the COL21A1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa54833 | |
Clone ID Related Accession (Same CDS sequence) | XM_017358914.1 | |
Accession Version | XM_017358914.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1476bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | collagen alpha-1(XXI) chain-like isoform X4 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGTTGCA AAATGAGATC CATGCATTTT GTGTTTTGGT GTCTTTACTT CATGCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017214403.1 |
CDS | 199..1674 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017358914.1 |
1 | ATGGGTTGCA AAATGAGATC CATGCATTTT GTGTTTTGGT GTCTTTACTT CATGCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa54834 | |
Clone ID Related Accession (Same CDS sequence) | XM_017358915.1 , XM_017358915.2 | |
Accession Version | XM_017358915.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1443bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | collagen alpha-1(XXI) chain-like isoform X5 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGTGTGC CAGGATTTAG AGGAAGTCCT GGCATTCAAG GCTCTCCTGG CATTGAGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017214404.1 |
CDS | 84..1526 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017358915.1 |
1 | ATGGGTGTGC CAGGATTTAG AGGAAGTCCT GGCATTCAAG GCTCTCCTGG CATTGAGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa54834 | |
Clone ID Related Accession (Same CDS sequence) | XM_017358915.1 , XM_017358915.2 | |
Accession Version | XM_017358915.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1443bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | collagen alpha-1(XXI) chain-like isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_017358915.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGTGTGC CAGGATTTAG AGGAAGTCCT GGCATTCAAG GCTCTCCTGG CATTGAGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017214404.1 |
CDS | 121..1563 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017358915.2 |
1 | ATGGGTGTGC CAGGATTTAG AGGAAGTCCT GGCATTCAAG GCTCTCCTGG CATTGAGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa54830 | |
Clone ID Related Accession (Same CDS sequence) | XM_002664080.5 , XM_017358911.1 , XM_002664080.6 | |
Accession Version | XM_002664080.5 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2907bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | collagen alpha-1(XXI) chain-like isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_002664080.4. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGTTGCA AAATGAGATC CATGCATTTT GTGTTTTGGT GTCTTTACTT CATGCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_002664126.4 |
CDS | 199..3105 |
Translation |
Target ORF information:
Target ORF information:
|
XM_002664080.5 |
1 | ATGGGTTGCA AAATGAGATC CATGCATTTT GTGTTTTGGT GTCTTTACTT CATGCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa54830 | |
Clone ID Related Accession (Same CDS sequence) | XM_002664080.5 , XM_017358911.1 , XM_002664080.6 | |
Accession Version | XM_017358911.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2907bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | collagen alpha-1(XXI) chain-like isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGTTGCA AAATGAGATC CATGCATTTT GTGTTTTGGT GTCTTTACTT CATGCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017214400.1 |
CDS | 74..2980 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017358911.1 |
1 | ATGGGTTGCA AAATGAGATC CATGCATTTT GTGTTTTGGT GTCTTTACTT CATGCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa54830 | |
Clone ID Related Accession (Same CDS sequence) | XM_002664080.5 , XM_017358911.1 , XM_002664080.6 | |
Accession Version | XM_002664080.6 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2907bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | collagen alpha-1(XXI) chain-like isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_002664080.5. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGTTGCA AAATGAGATC CATGCATTTT GTGTTTTGGT GTCTTTACTT CATGCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_002664126.4 |
CDS | 420..3326 |
Translation |
Target ORF information:
Target ORF information:
|
XM_002664080.6 |
1 | ATGGGTTGCA AAATGAGATC CATGCATTTT GTGTTTTGGT GTCTTTACTT CATGCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa54831 | |
Clone ID Related Accession (Same CDS sequence) | XM_017358912.1 , XM_017358912.2 | |
Accession Version | XM_017358912.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2898bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | collagen alpha-1(XXI) chain-like isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGTTGCA AAATGAGATC CATGCATTTT GTGTTTTGGT GTCTTTACTT CATGCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017214401.1 |
CDS | 199..3096 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017358912.1 |
1 | ATGGGTTGCA AAATGAGATC CATGCATTTT GTGTTTTGGT GTCTTTACTT CATGCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa54831 | |
Clone ID Related Accession (Same CDS sequence) | XM_017358912.1 , XM_017358912.2 | |
Accession Version | XM_017358912.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2898bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | collagen alpha-1(XXI) chain-like isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_017358912.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGTTGCA AAATGAGATC CATGCATTTT GTGTTTTGGT GTCTTTACTT CATGCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017214401.1 |
CDS | 421..3318 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017358912.2 |
1 | ATGGGTTGCA AAATGAGATC CATGCATTTT GTGTTTTGGT GTCTTTACTT CATGCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa54832 | |
Clone ID Related Accession (Same CDS sequence) | XM_017358913.1 | |
Accession Version | XM_017358913.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1578bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | collagen alpha-1(XXI) chain-like isoform X3 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGTTGCA AAATGAGATC CATGCATTTT GTGTTTTGGT GTCTTTACTT CATGCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017214402.1 |
CDS | 199..1776 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017358913.1 |
1 | ATGGGTTGCA AAATGAGATC CATGCATTTT GTGTTTTGGT GTCTTTACTT CATGCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.