Gene Symbol | svila |
Entrez Gene ID | 30112 |
Full Name | supervillin a |
Synonyms | sb:cb867,svil,wu:fd05a09 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » svila cDNA ORF clone
gRNAs
Gene Symbol | svila |
Entrez Gene ID | 30112 |
Full Name | supervillin a |
Synonyms | sb:cb867,svil,wu:fd05a09 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_017358423.1 | XP_017213912.1 | supervillin isoform X1 |
XM_021480011.1 | XP_021335686.1 | supervillin isoform X1 |
NM_001035261.2 | NP_001030338.2 | supervillin |
XM_021480012.1 | XP_021335687.1 | supervillin isoform X2 |
XM_021480016.1 | XP_021335691.1 | supervillin isoform X6 |
XM_021480014.1 | XP_021335689.1 | supervillin isoform X4 |
XM_021480013.1 | XP_021335688.1 | supervillin isoform X3 |
XM_021480015.1 | XP_021335690.1 | supervillin isoform X5 |
Bos taurus (cattle) | SVIL | NP_776615.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP007181 | XP_565017.3 |
Danio rerio (zebrafish) | svilb | XP_003197996.2 |
Xenopus tropicalis (tropical clawed frog) | svil | NP_001090765.1 |
Pan troglodytes (chimpanzee) | SVIL | XP_001136112.1 |
Canis lupus familiaris (dog) | SVIL | XP_005617106.1 |
Mus musculus (house mouse) | Svil | NP_694793.1 |
Rattus norvegicus (Norway rat) | Svil | NP_001101886.2 |
Gallus gallus (chicken) | SVIL | XP_004939254.1 |
SVIL | XP_001083894.2 | |
Danio rerio (zebrafish) | svila | NP_001030338.2 |
Homo sapiens (human) | SVIL | NP_068506.2 |
Drosophila melanogaster (fruit fly) | CG33232 | NP_995968.1 |
Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
Supervillin Is a Component of the Hair Cell's Cuticular Plate and the Head Plates of Organ of Corti Supporting Cells.
Pollock LM, Gupta N, Chen X, Luna EJ, McDermott BM Jr
PloS one11(7)e0158349(2016)
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
Prioritizing causal disease genes using unbiased genomic features.
Deo RC, Musso G, Tasan M, Tang P, Poon A, Yuan C, Felix JF, Vasan RS, Beroukhim R, De Marco T, Kwok PY, MacRae CA, Roth FP
Genome biology15(12)534(2014 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following svila gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the svila cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa148133 | |
Clone ID Related Accession (Same CDS sequence) | XM_021480015.1 | |
Accession Version | XM_021480015.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5760bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | supervillin isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007123.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTATCGGA ACCCTTGGAT CTCCAACTAT ATCAACCATG TCAAGTTGTG CCAAGGCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021335690.1 |
CDS | 340..6099 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTATCGGA ACCCTTGGAT CTCCAACTAT ATCAACCATG TCAAGTTGTG CCAAGGCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa17857 | |
Clone ID Related Accession (Same CDS sequence) | XM_021480016.1 | |
Accession Version | XM_021480016.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5544bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | supervillin isoform X6 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007123.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTATCGGA ACCCTTGGAT CTCCAACTAT ATCAACCATG TCAAGTTGTG CCAAGGCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021335691.1 |
CDS | 338..5881 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTATCGGA ACCCTTGGAT CTCCAACTAT ATCAACCATG TCAAGTTGTG CCAAGGCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa32155 | |
Clone ID Related Accession (Same CDS sequence) | NM_001035261.2 | |
Accession Version | NM_001035261.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5292bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-25 | |
Organism | Danio rerio(zebrafish) | |
Product | supervillin | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DQ227765.1 and CU914155.16. On Jul 22, 2010 this sequence version replaced NM_001035261.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: DQ227765.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476740, SAMEA4476746 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAACAGGA AGGAGCGAAT TGCACGGCGC CTGGAAGGAA TCGATAATGA TGTTCTCCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001030338.2 |
CDS | 352..5643 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAACAGGA AGGAGCGAAT TGCACGGCGC CTGGAAGGAA TCGATAATGA TGTTCTCCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa148129 | |
Clone ID Related Accession (Same CDS sequence) | XM_021480011.1 | |
Accession Version | XM_021480011.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 6795bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | supervillin isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007123.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTATCGGA ACCCTTGGAT CTCCAACTAT ATCAACCATG TCAAGTTGTG CCAAGGCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021335686.1 |
CDS | 344..7138 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTATCGGA ACCCTTGGAT CTCCAACTAT ATCAACCATG TCAAGTTGTG CCAAGGCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa148130 | |
Clone ID Related Accession (Same CDS sequence) | XM_021480012.1 | |
Accession Version | XM_021480012.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 6726bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | supervillin isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007123.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTATCGGA ACCCTTGGAT CTCCAACTAT ATCAACCATG TCAAGTTGTG CCAAGGCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021335687.1 |
CDS | 343..7068 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTATCGGA ACCCTTGGAT CTCCAACTAT ATCAACCATG TCAAGTTGTG CCAAGGCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa148131 | |
Clone ID Related Accession (Same CDS sequence) | XM_021480013.1 | |
Accession Version | XM_021480013.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 6720bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | supervillin isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007123.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTATCGGA ACCCTTGGAT CTCCAACTAT ATCAACCATG TCAAGTTGTG CCAAGGCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021335688.1 |
CDS | 343..7062 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTATCGGA ACCCTTGGAT CTCCAACTAT ATCAACCATG TCAAGTTGTG CCAAGGCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa148132 | |
Clone ID Related Accession (Same CDS sequence) | XM_021480014.1 | |
Accession Version | XM_021480014.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 6627bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | supervillin isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007123.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTATCGGA ACCCTTGGAT CTCCAACTAT ATCAACCATG TCAAGTTGTG CCAAGGCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021335689.1 |
CDS | 343..6969 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTATCGGA ACCCTTGGAT CTCCAACTAT ATCAACCATG TCAAGTTGTG CCAAGGCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa54437 | |
Clone ID Related Accession (Same CDS sequence) | XM_017358423.1 | |
Accession Version | XM_017358423.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 6651bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | supervillin isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007123.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTATCGGA ACCCTTGGAT CTCCAACTAT ATCAACCATG TCAAGTTGTG CCAAGGCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017213912.1 |
CDS | 340..6990 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTATCGGA ACCCTTGGAT CTCCAACTAT ATCAACCATG TCAAGTTGTG CCAAGGCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Evolution of complexity in the zebrafish synapse proteome. |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
Supervillin Is a Component of the Hair Cell's Cuticular Plate and the Head Plates of Organ of Corti Supporting Cells. |
RFX transcription factors are essential for hearing in mice. |
Prioritizing causal disease genes using unbiased genomic features. |