Gene Symbol | tomm40 |
Entrez Gene ID | 322645 |
Full Name | translocase of outer mitochondrial membrane 40 homolog (yeast) |
Synonyms | wu:fb68h07,zgc:64168 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » tomm40 cDNA ORF clone
Gene Symbol | tomm40 |
Entrez Gene ID | 322645 |
Full Name | translocase of outer mitochondrial membrane 40 homolog (yeast) |
Synonyms | wu:fb68h07,zgc:64168 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_017351318.2 | XP_017206807.1 | mitochondrial import receptor subunit TOM40 homolog isoform X1 |
XM_005158091.3 | XP_005158148.1 | mitochondrial import receptor subunit TOM40 homolog isoform X2 |
XM_017351318.1 | XP_017206807.1 | mitochondrial import receptor subunit TOM40 homolog isoform X1 |
NM_199614.1 | NP_955908.1 | mitochondrial import receptor subunit TOM40 homolog |
XM_005158091.4 | XP_005158148.1 | mitochondrial import receptor subunit TOM40 homolog isoform X2 |
Drosophila melanogaster (fruit fly) | tomboy40 | NP_610213.1 |
Saccharomyces cerevisiae (baker's yeast) | TOM40 | NP_013930.1 |
TOMM40 | XP_001109661.1 | |
Drosophila melanogaster (fruit fly) | Tom40 | NP_001259313.1 |
Caenorhabditis elegans (roundworm) | tomm-40 | NP_495912.1 |
Kluyveromyces lactis | KLLA0F06292g | XP_455365.1 |
Eremothecium gossypii | AGOS_AFL183C | NP_985367.1 |
Xenopus tropicalis (tropical clawed frog) | tomm40 | NP_989125.1 |
Homo sapiens (human) | TOMM40 | NP_006105.1 |
Bos taurus (cattle) | TOMM40 | NP_001068906.1 |
Rattus norvegicus (Norway rat) | Tomm40 | NP_997685.1 |
Danio rerio (zebrafish) | tomm40 | NP_955908.1 |
Schizosaccharomyces pombe (fission yeast) | tom40 | NP_595546.2 |
Arabidopsis thaliana (thale cress) | AT1G50400 | NP_175457.1 |
Canis lupus familiaris (dog) | TOMM40 | XP_852633.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_08637 | XP_003711067.1 |
Neurospora crassa | NCU01179 | XP_961545.1 |
Mus musculus (house mouse) | Tomm40 | NP_001103218.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP007871 | XP_317621.2 |
Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)
Targeted Gene Expression in Zebrafish Exposed to Chlorpyrifos-Oxon Confirms Phenotype-Specific Mechanisms Leading to Adverse Outcomes.
Garcia-Reyero N, Escalon L, Prats E, Faria M, Soares AM, Rald?a D
Bulletin of environmental contamination and toxicology96(6)707-13(2016 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following tomm40 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the tomm40 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa21413 | |
Clone ID Related Accession (Same CDS sequence) | XM_005158091.3 , NM_199614.1 , XM_005158091.4 | |
Accession Version | NM_199614.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1035bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-01-26 | |
Organism | Danio rerio(zebrafish) | |
Product | mitochondrial import receptor subunit TOM40 homolog | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC053295.1. ##Evidence-Data-START## Transcript exon combination :: BC053295.1, EH455759.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## |
1 | ATGGGCAGTG TGTTGGCTGC CAGCTCCCCC AACCCACCAC CAGCCTCAGG GGGTGGCACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_955908.1 |
CDS | 21..1055 |
Translation |
Target ORF information:
Target ORF information:
|
NM_199614.1 |
1 | ATGGGCAGTG TGTTGGCTGC CAGCTCCCCC AACCCACCAC CAGCCTCAGG GGGTGGCACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa21413 | |
Clone ID Related Accession (Same CDS sequence) | XM_005158091.3 , NM_199614.1 , XM_005158091.4 | |
Accession Version | XM_005158091.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1035bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | mitochondrial import receptor subunit TOM40 homolog isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007127.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005158091.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCAGTG TGTTGGCTGC CAGCTCCCCC AACCCACCAC CAGCCTCAGG GGGTGGCACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005158148.1 |
CDS | 429..1463 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005158091.3 |
1 | ATGGGCAGTG TGTTGGCTGC CAGCTCCCCC AACCCACCAC CAGCCTCAGG GGGTGGCACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa21413 | |
Clone ID Related Accession (Same CDS sequence) | XM_005158091.3 , NM_199614.1 , XM_005158091.4 | |
Accession Version | XM_005158091.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1035bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | mitochondrial import receptor subunit TOM40 homolog isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007127.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005158091.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCAGTG TGTTGGCTGC CAGCTCCCCC AACCCACCAC CAGCCTCAGG GGGTGGCACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005158148.1 |
CDS | 429..1463 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005158091.4 |
1 | ATGGGCAGTG TGTTGGCTGC CAGCTCCCCC AACCCACCAC CAGCCTCAGG GGGTGGCACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa55363 | |
Clone ID Related Accession (Same CDS sequence) | XM_017351318.2 , XM_017351318.1 | |
Accession Version | XM_017351318.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1083bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | mitochondrial import receptor subunit TOM40 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007127.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_017351318.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGGCGTG AATCAAGCTC CTCATGCTGG TACACTAGTT TTCTCACCAT GGGCAGTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017206807.1 |
CDS | 170..1252 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017351318.2 |
1 | ATGAGGCGTG AATCAAGCTC CTCATGCTGG TACACTAGTT TTCTCACCAT GGGCAGTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa55363 | |
Clone ID Related Accession (Same CDS sequence) | XM_017351318.2 , XM_017351318.1 | |
Accession Version | XM_017351318.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1083bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | mitochondrial import receptor subunit TOM40 homolog isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007127.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGGCGTG AATCAAGCTC CTCATGCTGG TACACTAGTT TTCTCACCAT GGGCAGTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017206807.1 |
CDS | 192..1274 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017351318.1 |
1 | ATGAGGCGTG AATCAAGCTC CTCATGCTGG TACACTAGTT TTCTCACCAT GGGCAGTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Evolution of complexity in the zebrafish synapse proteome. |
Targeted Gene Expression in Zebrafish Exposed to Chlorpyrifos-Oxon Confirms Phenotype-Specific Mechanisms Leading to Adverse Outcomes. |